Plant mobile domain
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 2 cut(s) | 376, 1344 |
| Acc16I | TGCGCA | 1 cut(s) | 1473 |
| Acc36I | ACCTGC | 2 cut(s) | 1486, 1579 |
| AccB1I | GGYRCC | 1 cut(s) | 769 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 475 |
| AccBSI | CCGCTC | 2 cut(s) | 1287, 1793 |
| AccII | CGCG | 5 cut(s) | 272, 438, 671, 1090, 1923 |
| AccIII | TCCGGA | 2 cut(s) | 1181, 1358 |
| AclWI | GGATC | 6 cut(s) | 403, 416, 623, 701, 1595, 1718 |
| AcoI | YGGCCR | 7 cut(s) | 105, 289, 462, 1167, 1174, 1269, 1662 |
| AcuI | CTGAAG | 2 cut(s) | 936, 1527 |
| AcvI | CACGTG | 1 cut(s) | 651 |
| AfaI | GTAC | 7 cut(s) | 256, 318, 506, 545, 566, 785, 1926 |
| AfeI | AGCGCT | 1 cut(s) | 1596 |
| AgeI | ACCGGT | 1 cut(s) | 313 |
| AgsI | TTSAA | 6 cut(s) | 1000, 1025, 1214, 1220, 1760, 1784 |
| AjnI | CCWGG | 4 cut(s) | 622, 791, 1675, 1941 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 405, 437 |
| AluBI | AGCT | 8 cut(s) | 714, 1106, 1112, 1210, 1512, 1522, 1630, 1739 |
| AluI | AGCT | 8 cut(s) | 714, 1106, 1112, 1210, 1512, 1522, 1630, 1739 |
| Alw21I | GWGCWC | 1 cut(s) | 174 |
| Alw26I | GTCTC | 2 cut(s) | 362, 943 |
| AlwI | GGATC | 6 cut(s) | 403, 416, 623, 701, 1595, 1718 |
| Ama87I | CYCGRG | 3 cut(s) | 305, 833, 888 |
| Aor13HI | TCCGGA | 2 cut(s) | 1181, 1358 |
| Aor51HI | AGCGCT | 1 cut(s) | 1596 |
| ApaI | GGGCCC | 1 cut(s) | 828 |
| ApeKI | GCWGC | 9 cut(s) | 120, 698, 980, 1262, 1281, 1385, 1571, 1619, 1856 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 959, 991 |
| AsiGI | ACCGGT | 1 cut(s) | 313 |
| AspLEI | GCGC | 7 cut(s) | 1090, 1281, 1423, 1474, 1588, 1597, 1894 |
| AsuC2I | CCSGG | 3 cut(s) | 167, 1141, 1166 |
| AsuHPI | GGTGA | 2 cut(s) | 1210, 1506 |
| AvaI | CYCGRG | 3 cut(s) | 305, 833, 888 |
| AvaII | GGWCC | 5 cut(s) | 261, 1291, 1353, 1397, 1679 |
| BaeGI | GKGCMC | 2 cut(s) | 828, 1938 |
| BalI | TGGCCA | 2 cut(s) | 1176, 1271 |
| BamHI | GGATCC | 1 cut(s) | 408 |
| BanI | GGYRCC | 1 cut(s) | 769 |
| BanII | GRGCYC | 7 cut(s) | 60, 306, 328, 828, 889, 958, 1096 |
| BauI | CACGAG | 1 cut(s) | 1652 |
| BbrPI | CACGTG | 1 cut(s) | 651 |
| BbsI | GAAGAC | 1 cut(s) | 1227 |
| Bbv12I | GWGCWC | 1 cut(s) | 174 |
| BbvCI | CCTCAGC | 2 cut(s) | 702, 1686 |
| BbvI | GCAGC | 9 cut(s) | 132, 685, 992, 1249, 1293, 1372, 1558, 1631, 1843 |
| BccI | CCATC | 5 cut(s) | 44, 141, 992, 1408, 1838 |
| BceAI | ACGGC | 3 cut(s) | 291, 304, 887 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 959, 993 |
| BciT130I | CCWGG | 4 cut(s) | 624, 793, 1677, 1943 |
| BciVI | GTATCC | 1 cut(s) | 1042 |
| BclI | TGATCA | 1 cut(s) | 1200 |
| BcnI | CCSGG | 3 cut(s) | 167, 1141, 1166 |
| BcoDI | GTCTC | 2 cut(s) | 362, 943 |
| BfaI | CTAG | 3 cut(s) | 372, 551, 1368 |
| BfmI | CTRYAG | 1 cut(s) | 1949 |
| BfoI | RGCGCY | 2 cut(s) | 1424, 1598 |
| BfuAI | ACCTGC | 2 cut(s) | 1486, 1579 |
| BfuI | GTATCC | 1 cut(s) | 1042 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 1412 |
| Bme1390I | CCNGG | 7 cut(s) | 167, 624, 793, 1141, 1166, 1677, 1943 |
| Bme18I | GGWCC | 5 cut(s) | 261, 1291, 1353, 1397, 1679 |
| BmeT110I | CYCGRG | 3 cut(s) | 305, 833, 888 |
| BmrFI | CCNGG | 7 cut(s) | 167, 624, 793, 1141, 1166, 1677, 1943 |
| BmrI | ACTGGG | 2 cut(s) | 329, 892 |
| BmsI | GCATC | 4 cut(s) | 367, 778, 889, 1459 |
| BmuI | ACTGGG | 2 cut(s) | 329, 892 |
| BpiI | GAAGAC | 1 cut(s) | 1227 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 491, 523, 923, 955 |
| BpmI | CTGGAG | 1 cut(s) | 221 |
| Bpu10I | CCTNAGC | 3 cut(s) | 702, 1518, 1686 |
| BpuEI | CTTGAG | 3 cut(s) | 626, 1092, 1827 |
| BpuMI | CCSGG | 3 cut(s) | 167, 1141, 1166 |
| BsaAI | YACGTR | 1 cut(s) | 651 |
| BsaI | GGTCTC | 1 cut(s) | 943 |
| BsaJI | CCNNGG | 9 cut(s) | 102, 832, 1044, 1139, 1164, 1307, 1380, 1941, 1942 |
| BsaWI | WCCGGW | 3 cut(s) | 313, 1181, 1358 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1782, 1812 |
| Bse118I | RCCGGY | 5 cut(s) | 313, 460, 844, 1084, 1350 |
| Bse1I | ACTGG | 8 cut(s) | 40, 256, 324, 887, 1177, 1344, 1455, 1911 |
| BseAI | TCCGGA | 2 cut(s) | 1181, 1358 |
| BseBI | CCWGG | 4 cut(s) | 624, 793, 1677, 1943 |
| BseDI | CCNNGG | 9 cut(s) | 102, 832, 1044, 1139, 1164, 1307, 1380, 1941, 1942 |
| BseGI | GGATG | 3 cut(s) | 358, 509, 1324 |
| BseMII | CTCAG | 6 cut(s) | 693, 696, 724, 1509, 1548, 1677 |
| BseNI | ACTGG | 8 cut(s) | 40, 256, 324, 887, 1177, 1344, 1455, 1911 |
| BseRI | GAGGAG | 3 cut(s) | 947, 1369, 1574 |
| BseSI | GKGCMC | 2 cut(s) | 828, 1938 |
| BseX3I | CGGCCG | 4 cut(s) | 289, 462, 1167, 1662 |
| BseXI | GCAGC | 9 cut(s) | 132, 685, 992, 1249, 1293, 1372, 1558, 1631, 1843 |
| BseYI | CCCAGC | 3 cut(s) | 951, 1062, 1388 |
| BsgI | GTGCAG | 5 cut(s) | 214, 835, 1514, 1557, 1634 |
| Bsh1236I | CGCG | 5 cut(s) | 272, 438, 671, 1090, 1923 |
| Bsh1285I | CGRYCG | 5 cut(s) | 292, 465, 1170, 1569, 1665 |
| BshNI | GGYRCC | 1 cut(s) | 769 |
| BshTI | ACCGGT | 1 cut(s) | 313 |
| BsiEI | CGRYCG | 5 cut(s) | 292, 465, 1170, 1569, 1665 |
| BsiHKAI | GWGCWC | 1 cut(s) | 174 |
| BsiHKCI | CYCGRG | 3 cut(s) | 305, 833, 888 |
| BslFI | GGGAC | 2 cut(s) | 925, 977 |
| BsmAI | GTCTC | 2 cut(s) | 362, 943 |
| BsmFI | GGGAC | 2 cut(s) | 925, 977 |
| Bso31I | GGTCTC | 1 cut(s) | 943 |
| BsoBI | CYCGRG | 3 cut(s) | 305, 833, 888 |
| Bsp120I | GGGCCC | 1 cut(s) | 824 |
| Bsp1286I | GDGCHC | 9 cut(s) | 60, 174, 306, 328, 828, 889, 958, 1096, 1938 |
| Bsp13I | TCCGGA | 2 cut(s) | 1181, 1358 |
| Bsp19I | CCATGG | 2 cut(s) | 102, 1307 |
| Bsp68I | TCGCGA | 2 cut(s) | 272, 671 |
| BspCNI | CTCAG | 6 cut(s) | 694, 695, 723, 1510, 1549, 1678 |
| BspEI | TCCGGA | 2 cut(s) | 1181, 1358 |
| BspFNI | CGCG | 5 cut(s) | 272, 438, 671, 1090, 1923 |
| BspMI | ACCTGC | 2 cut(s) | 1486, 1579 |
| BspPI | GGATC | 6 cut(s) | 403, 416, 623, 701, 1595, 1718 |
| BspT107I | GGYRCC | 1 cut(s) | 769 |
| BspTNI | GGTCTC | 1 cut(s) | 943 |
| BsrBI | CCGCTC | 2 cut(s) | 1287, 1793 |
| BsrFI | RCCGGY | 5 cut(s) | 313, 460, 844, 1084, 1350 |
| BsrI | ACTGG | 8 cut(s) | 40, 256, 324, 887, 1177, 1344, 1455, 1911 |
| BssAI | RCCGGY | 5 cut(s) | 313, 460, 844, 1084, 1350 |
| BssECI | CCNNGG | 9 cut(s) | 102, 832, 1044, 1139, 1164, 1307, 1380, 1941, 1942 |
| BssSI | CACGAG | 1 cut(s) | 1652 |
| BssT1I | CCWWGG | 2 cut(s) | 102, 1307 |
| Bst2BI | CACGAG | 1 cut(s) | 1652 |
| Bst2UI | CCWGG | 4 cut(s) | 624, 793, 1677, 1943 |
| Bst4CI | ACNGT | 2 cut(s) | 569, 1255 |
| Bst6I | CTCTTC | 3 cut(s) | 241, 1074, 1308 |
| BstBAI | YACGTR | 1 cut(s) | 651 |
| BstDEI | CTNAG | 6 cut(s) | 682, 702, 710, 1518, 1557, 1686 |
| BstDSI | CCRYGG | 2 cut(s) | 102, 1307 |
| BstF5I | GGATG | 3 cut(s) | 358, 509, 1324 |
| BstFNI | CGCG | 5 cut(s) | 272, 438, 671, 1090, 1923 |
| BstH2I | RGCGCY | 2 cut(s) | 1424, 1598 |
| BstHHI | GCGC | 7 cut(s) | 1090, 1281, 1423, 1474, 1588, 1597, 1894 |
| BstMAI | GTCTC | 2 cut(s) | 362, 943 |
| BstMCI | CGRYCG | 5 cut(s) | 292, 465, 1170, 1569, 1665 |
| BstNI | CCWGG | 4 cut(s) | 624, 793, 1677, 1943 |
| BstNSI | RCATGY | 2 cut(s) | 340, 379 |
| BstSCI | CCNGG | 7 cut(s) | 165, 622, 791, 1139, 1164, 1675, 1941 |
| BstSFI | CTRYAG | 1 cut(s) | 1949 |
| BstSLI | GKGCMC | 2 cut(s) | 828, 1938 |
| BstUI | CGCG | 5 cut(s) | 272, 438, 671, 1090, 1923 |
| BstV1I | GCAGC | 9 cut(s) | 132, 685, 992, 1249, 1293, 1372, 1558, 1631, 1843 |
| BstV2I | GAAGAC | 1 cut(s) | 1227 |
| BstX2I | RGATCY | 1 cut(s) | 408 |
| BstYI | RGATCY | 1 cut(s) | 408 |
| BstZI | CGGCCG | 4 cut(s) | 289, 462, 1167, 1662 |
| BsuI | GTATCC | 1 cut(s) | 1042 |
| BtgI | CCRYGG | 2 cut(s) | 102, 1307 |
| BtgZI | GCGATG | 2 cut(s) | 453, 1482 |
| BtsCI | GGATG | 3 cut(s) | 358, 509, 1324 |
| BtsI | GCAGTG | 1 cut(s) | 449 |
| BtsIMutI | CAGTG | 5 cut(s) | 249, 449, 639, 1162, 1299 |
| BtuMI | TCGCGA | 2 cut(s) | 272, 671 |
| BveI | ACCTGC | 2 cut(s) | 1486, 1579 |
| CfoI | GCGC | 7 cut(s) | 1090, 1281, 1423, 1474, 1588, 1597, 1894 |
| Cfr10I | RCCGGY | 5 cut(s) | 313, 460, 844, 1084, 1350 |
| CseI | GACGC | 1 cut(s) | 1556 |
| Csp6I | GTAC | 7 cut(s) | 255, 317, 505, 544, 565, 784, 1925 |
| CspAI | ACCGGT | 1 cut(s) | 313 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 132, 167 |
| CviAII | CATG | 8 cut(s) | 68, 103, 113, 337, 355, 376, 1308, 1775 |
| CviQI | GTAC | 7 cut(s) | 255, 317, 505, 544, 565, 784, 1925 |
| DdeI | CTNAG | 6 cut(s) | 682, 702, 710, 1518, 1557, 1686 |
| DrdI | GACNNNNNNGTC | 2 cut(s) | 376, 1344 |
| DseDI | GACNNNNNNGTC | 2 cut(s) | 376, 1344 |
| EaeI | YGGCCR | 7 cut(s) | 105, 289, 462, 1167, 1174, 1269, 1662 |
| EagI | CGGCCG | 4 cut(s) | 289, 462, 1167, 1662 |
| Eam1104I | CTCTTC | 3 cut(s) | 241, 1074, 1308 |
| EarI | CTCTTC | 3 cut(s) | 241, 1074, 1308 |
| EciI | GGCGGA | 2 cut(s) | 422, 447 |
| EclXI | CGGCCG | 4 cut(s) | 289, 462, 1167, 1662 |
| Eco130I | CCWWGG | 2 cut(s) | 102, 1307 |
| Eco24I | GRGCYC | 7 cut(s) | 60, 306, 328, 828, 889, 958, 1096 |
| Eco31I | GGTCTC | 1 cut(s) | 943 |
| Eco47I | GGWCC | 5 cut(s) | 261, 1291, 1353, 1397, 1679 |
| Eco47III | AGCGCT | 1 cut(s) | 1596 |
| Eco52I | CGGCCG | 4 cut(s) | 289, 462, 1167, 1662 |
| Eco57I | CTGAAG | 2 cut(s) | 936, 1527 |
| Eco72I | CACGTG | 1 cut(s) | 651 |
| Eco88I | CYCGRG | 3 cut(s) | 305, 833, 888 |
| EcoO109I | RGGNCCY | 1 cut(s) | 825 |
| EcoRII | CCWGG | 4 cut(s) | 622, 791, 1675, 1941 |
| EcoT14I | CCWWGG | 2 cut(s) | 102, 1307 |
| EcoT22I | ATGCAT | 1 cut(s) | 360 |
| EcoT38I | GRGCYC | 7 cut(s) | 60, 306, 328, 828, 889, 958, 1096 |
| ErhI | CCWWGG | 2 cut(s) | 102, 1307 |
| FaeI | CATG | 8 cut(s) | 71, 106, 116, 340, 358, 379, 1311, 1778 |
| FaqI | GGGAC | 2 cut(s) | 925, 977 |
| FatI | CATG | 8 cut(s) | 67, 102, 112, 336, 354, 375, 1307, 1774 |
| FauI | CCCGC | 1 cut(s) | 1786 |
| FbaI | TGATCA | 1 cut(s) | 1200 |
| FokI | GGATG | 3 cut(s) | 345, 496, 1331 |
| FriOI | GRGCYC | 7 cut(s) | 60, 306, 328, 828, 889, 958, 1096 |
| FspBI | CTAG | 3 cut(s) | 372, 551, 1368 |
| FspI | TGCGCA | 1 cut(s) | 1473 |
| GlaI | GCGC | 7 cut(s) | 1089, 1280, 1422, 1473, 1587, 1596, 1893 |
| GsaI | CCCAGC | 3 cut(s) | 955, 1066, 1392 |
| GsuI | CTGGAG | 1 cut(s) | 221 |
| HaeII | RGCGCY | 2 cut(s) | 1424, 1598 |
| HgaI | GACGC | 1 cut(s) | 1556 |
| HhaI | GCGC | 7 cut(s) | 1090, 1281, 1423, 1474, 1588, 1597, 1894 |
| Hin1II | CATG | 8 cut(s) | 71, 106, 116, 340, 358, 379, 1311, 1778 |
| Hin6I | GCGC | 7 cut(s) | 1088, 1279, 1421, 1472, 1586, 1595, 1892 |
| HinP1I | GCGC | 7 cut(s) | 1088, 1279, 1421, 1472, 1586, 1595, 1892 |
| HincII | GTYRAC | 1 cut(s) | 907 |
| HindII | GTYRAC | 1 cut(s) | 907 |
| HinfI | GANTC | 6 cut(s) | 591, 819, 1116, 1144, 1672, 1756 |
| HphI | GGTGA | 2 cut(s) | 1210, 1506 |
| Hpy166II | GTNNAC | 1 cut(s) | 907 |
| Hpy188I | TCNGA | 8 cut(s) | 483, 526, 685, 1045, 1234, 1291, 1546, 1558 |
| Hpy8I | GTNNAC | 1 cut(s) | 907 |
| Hpy99I | CGWCG | 3 cut(s) | 277, 971, 1350 |
| HpyAV | CCTTC | 6 cut(s) | 275, 629, 1367, 1388, 1551, 1908 |
| HpyCH4III | ACNGT | 2 cut(s) | 569, 1255 |
| HpyCH4IV | ACGT | 2 cut(s) | 297, 650 |
| HpyCH4V | TGCA | 9 cut(s) | 67, 231, 358, 816, 980, 1495, 1574, 1634, 1651 |
| HpyF3I | CTNAG | 6 cut(s) | 682, 702, 710, 1518, 1557, 1686 |
| HpySE526I | ACGT | 2 cut(s) | 297, 650 |
| Hsp92II | CATG | 8 cut(s) | 71, 106, 116, 340, 358, 379, 1311, 1778 |
| HspAI | GCGC | 7 cut(s) | 1088, 1279, 1421, 1472, 1586, 1595, 1892 |
| Kpn2I | TCCGGA | 2 cut(s) | 1181, 1358 |
| KroI | GCCGGC | 2 cut(s) | 460, 844 |
| KroNI | GCCGGC | 2 cut(s) | 462, 846 |
| Ksp22I | TGATCA | 1 cut(s) | 1200 |
| LmnI | GCTCC | 7 cut(s) | 169, 323, 1207, 1382, 1561, 1790, 1885 |
| Lsp1109I | GCAGC | 9 cut(s) | 132, 685, 992, 1249, 1293, 1372, 1558, 1631, 1843 |
| LweI | GCATC | 4 cut(s) | 367, 778, 889, 1459 |
| MaeI | CTAG | 3 cut(s) | 372, 551, 1368 |
| MaeII | ACGT | 2 cut(s) | 297, 650 |
| MaeIII | GTNAC | 1 cut(s) | 635 |
| MbiI | CCGCTC | 2 cut(s) | 1287, 1793 |
| MboII | GAAGA | 9 cut(s) | 228, 421, 600, 929, 932, 1061, 1232, 1325, 1538 |
| MfeI | CAATTG | 2 cut(s) | 764, 946 |
| MflI | RGATCY | 1 cut(s) | 408 |
| MhlI | GDGCHC | 9 cut(s) | 60, 174, 306, 328, 828, 889, 958, 1096, 1938 |
| MlsI | TGGCCA | 2 cut(s) | 1176, 1271 |
| MluCI | AATT | 9 cut(s) | 74, 88, 189, 749, 764, 946, 995, 1475, 1485 |
| MluNI | TGGCCA | 2 cut(s) | 1176, 1271 |
| MlyI | GAGTC | 2 cut(s) | 1153, 1681 |
| Mox20I | TGGCCA | 2 cut(s) | 1176, 1271 |
| Mph1103I | ATGCAT | 1 cut(s) | 360 |
| MroI | TCCGGA | 2 cut(s) | 1181, 1358 |
| MroNI | GCCGGC | 2 cut(s) | 460, 844 |
| MscI | TGGCCA | 2 cut(s) | 1176, 1271 |
| MslI | CAYNNNNRTG | 1 cut(s) | 811 |
| Msp20I | TGGCCA | 2 cut(s) | 1176, 1271 |
| MspA1I | CMGCKG | 5 cut(s) | 1172, 1262, 1697, 1739, 1862 |
| MspR9I | CCNGG | 7 cut(s) | 167, 624, 793, 1141, 1166, 1677, 1943 |
| MunI | CAATTG | 2 cut(s) | 764, 946 |
| MvaI | CCWGG | 4 cut(s) | 624, 793, 1677, 1943 |
| MvnI | CGCG | 5 cut(s) | 272, 438, 671, 1090, 1923 |
| NaeI | GCCGGC | 2 cut(s) | 462, 846 |
| NciI | CCSGG | 3 cut(s) | 167, 1141, 1166 |
| NcoI | CCATGG | 2 cut(s) | 102, 1307 |
| NgoMIV | GCCGGC | 2 cut(s) | 460, 844 |
| NlaIII | CATG | 8 cut(s) | 71, 106, 116, 340, 358, 379, 1311, 1778 |
| NmeAIII | GCCGAG | 1 cut(s) | 1361 |
| NruI | TCGCGA | 2 cut(s) | 272, 671 |
| NsbI | TGCGCA | 1 cut(s) | 1473 |
| NsiI | ATGCAT | 1 cut(s) | 360 |
| NspI | RCATGY | 2 cut(s) | 340, 379 |
| PaeR7I | CTCGAG | 1 cut(s) | 888 |
| PasI | CCCWGGG | 1 cut(s) | 1942 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 294, 1342 |
| PdiI | GCCGGC | 2 cut(s) | 462, 846 |
| PfeI | GAWTC | 4 cut(s) | 591, 819, 1116, 1756 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 475 |
| PinAI | ACCGGT | 1 cut(s) | 313 |
| Ple19I | CGATCG | 1 cut(s) | 1569 |
| PleI | GAGTC | 2 cut(s) | 1152, 1680 |
| PmaCI | CACGTG | 1 cut(s) | 651 |
| PmlI | CACGTG | 1 cut(s) | 651 |
| PpsI | GAGTC | 2 cut(s) | 1152, 1680 |
| Ppu21I | YACGTR | 1 cut(s) | 651 |
| Psp6I | CCWGG | 4 cut(s) | 622, 791, 1675, 1941 |
| PspCI | CACGTG | 1 cut(s) | 651 |
| PspFI | CCCAGC | 3 cut(s) | 951, 1062, 1388 |
| PspGI | CCWGG | 4 cut(s) | 622, 791, 1675, 1941 |
| PspOMI | GGGCCC | 1 cut(s) | 824 |
| PspXI | VCTCGAGB | 1 cut(s) | 888 |
| PsuI | RGATCY | 1 cut(s) | 408 |
| PvuI | CGATCG | 1 cut(s) | 1569 |
| PvuII | CAGCTG | 1 cut(s) | 1739 |
| RruI | TCGCGA | 2 cut(s) | 272, 671 |
| RsaI | GTAC | 7 cut(s) | 256, 318, 506, 545, 566, 785, 1926 |
| RsaNI | GTAC | 7 cut(s) | 255, 317, 505, 544, 565, 784, 1925 |
| RseI | CAYNNNNRTG | 1 cut(s) | 811 |
| SchI | GAGTC | 2 cut(s) | 1153, 1681 |
| ScrFI | CCNGG | 7 cut(s) | 167, 624, 793, 1141, 1166, 1677, 1943 |
| SduI | GDGCHC | 9 cut(s) | 60, 174, 306, 328, 828, 889, 958, 1096, 1938 |
| SfaNI | GCATC | 4 cut(s) | 367, 778, 889, 1459 |
| SfcI | CTRYAG | 1 cut(s) | 1949 |
| Sfr274I | CTCGAG | 1 cut(s) | 888 |
| SinI | GGWCC | 5 cut(s) | 261, 1291, 1353, 1397, 1679 |
| SlaI | CTCGAG | 1 cut(s) | 888 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 811 |
| SmlI | CTYRAG | 4 cut(s) | 605, 888, 1107, 1842 |
| SmoI | CTYRAG | 4 cut(s) | 605, 888, 1107, 1842 |
| Sse9I | AATT | 9 cut(s) | 74, 88, 189, 749, 764, 946, 995, 1475, 1485 |
| SspMI | CTAG | 3 cut(s) | 372, 551, 1368 |
| StyD4I | CCNGG | 7 cut(s) | 165, 622, 791, 1139, 1164, 1675, 1941 |
| StyI | CCWWGG | 2 cut(s) | 102, 1307 |
| TaaI | ACNGT | 2 cut(s) | 569, 1255 |
| TaiI | ACGT | 2 cut(s) | 300, 653 |
| TaqI | TCGA | 5 cut(s) | 78, 98, 889, 1336, 1929 |
| TasI | AATT | 9 cut(s) | 74, 88, 189, 749, 764, 946, 995, 1475, 1485 |
| TfiI | GAWTC | 4 cut(s) | 591, 819, 1116, 1756 |
| TscAI | CASTG | 5 cut(s) | 256, 456, 646, 1162, 1306 |
| TseI | GCWGC | 9 cut(s) | 120, 698, 980, 1262, 1281, 1385, 1571, 1619, 1856 |
| TspDTI | ATGAA | 2 cut(s) | 211, 1335 |
| TspGWI | ACGGA | 1 cut(s) | 1220 |
| TspRI | CASTG | 5 cut(s) | 256, 456, 646, 1162, 1306 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 475 |
| VpaK11BI | GGWCC | 5 cut(s) | 261, 1291, 1353, 1397, 1679 |
| XceI | RCATGY | 2 cut(s) | 340, 379 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1109 |
| XhoI | CTCGAG | 1 cut(s) | 888 |
| XspI | CTAG | 3 cut(s) | 372, 551, 1368 |
| Zsp2I | ATGCAT | 1 cut(s) | 360 |