Plant mobile domain
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 2 cut(s) | 2041, 2455 |
| Acc65I | GGTACC | 2 cut(s) | 1273, 3201 |
| AccB1I | GGYRCC | 4 cut(s) | 269, 758, 1273, 3201 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 2629 |
| AccBSI | CCGCTC | 1 cut(s) | 1845 |
| AccI | GTMKAC | 3 cut(s) | 1410, 3032, 3053 |
| AccIII | TCCGGA | 2 cut(s) | 181, 3126 |
| AclWI | GGATC | 9 cut(s) | 907, 920, 1127, 1775, 1822, 2003, 2102, 2535, 2564 |
| AcoI | YGGCCR | 5 cut(s) | 302, 574, 793, 1168, 2157 |
| AcsI | RAATTY | 2 cut(s) | 2384, 2707 |
| AcuI | CTGAAG | 3 cut(s) | 1440, 1578, 2963 |
| AfeI | AGCGCT | 1 cut(s) | 628 |
| AflII | CTTAAG | 1 cut(s) | 2521 |
| AgeI | ACCGGT | 1 cut(s) | 817 |
| AgsI | TTSAA | 8 cut(s) | 929, 1538, 1586, 2027, 2693, 2837, 2865, 2927 |
| Alw21I | GWGCWC | 7 cut(s) | 88, 1110, 1227, 1361, 1609, 1666, 1737 |
| Alw26I | GTCTC | 5 cut(s) | 338, 866, 1020, 1456, 2706 |
| Alw44I | GTGCAC | 1 cut(s) | 1662 |
| AlwI | GGATC | 9 cut(s) | 907, 920, 1127, 1775, 1822, 2003, 2102, 2535, 2564 |
| Ama87I | CYCGRG | 3 cut(s) | 1919, 1958, 2198 |
| Aor13HI | TCCGGA | 2 cut(s) | 181, 3126 |
| Aor51HI | AGCGCT | 1 cut(s) | 628 |
| ApaI | GGGCCC | 5 cut(s) | 161, 832, 1332, 1344, 1393 |
| ApaLI | GTGCAC | 1 cut(s) | 1662 |
| ApoI | RAATTY | 2 cut(s) | 2384, 2707 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 479, 511, 1472, 1504 |
| AscI | GGCGCGCC | 1 cut(s) | 2319 |
| AseI | ATTAAT | 1 cut(s) | 2430 |
| AsiGI | ACCGGT | 1 cut(s) | 817 |
| Asp718I | GGTACC | 2 cut(s) | 1273, 3201 |
| AsuC2I | CCSGG | 4 cut(s) | 671, 1172, 1700, 1985 |
| AsuHPI | GGTGA | 5 cut(s) | 379, 589, 1908, 2365, 2647 |
| AvaI | CYCGRG | 3 cut(s) | 1919, 1958, 2198 |
| AvaII | GGWCC | 9 cut(s) | 765, 1467, 1591, 1618, 1849, 2297, 2577, 2590, 3129 |
| AxyI | CCTNAGG | 2 cut(s) | 1336, 1810 |
| BaeGI | GKGCMC | 8 cut(s) | 161, 274, 355, 832, 1332, 1344, 1393, 1666 |
| BalI | TGGCCA | 2 cut(s) | 304, 576 |
| BamHI | GGATCC | 1 cut(s) | 912 |
| BanI | GGYRCC | 4 cut(s) | 269, 758, 1273, 3201 |
| BanII | GRGCYC | 9 cut(s) | 161, 810, 832, 1227, 1332, 1344, 1393, 1609, 2121 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 2718, 2750 |
| BauI | CACGAG | 1 cut(s) | 354 |
| BbsI | GAAGAC | 2 cut(s) | 1566, 2844 |
| Bbv12I | GWGCWC | 7 cut(s) | 88, 1110, 1227, 1361, 1609, 1666, 1737 |
| BbvCI | CCTCAGC | 2 cut(s) | 1511, 2088 |
| BceAI | ACGGC | 5 cut(s) | 220, 808, 924, 1051, 2655 |
| BclI | TGATCA | 1 cut(s) | 1899 |
| BcnI | CCSGG | 4 cut(s) | 671, 1172, 1700, 1985 |
| BcoDI | GTCTC | 5 cut(s) | 338, 866, 1020, 1456, 2706 |
| BfaI | CTAG | 9 cut(s) | 98, 362, 1128, 1370, 1826, 2315, 2328, 2763, 2774 |
| BfmI | CTRYAG | 4 cut(s) | 1407, 1746, 2049, 2282 |
| BfoI | RGCGCY | 2 cut(s) | 474, 630 |
| BfrI | CTTAAG | 1 cut(s) | 2521 |
| BfuAI | ACCTGC | 2 cut(s) | 2041, 2455 |
| BglII | AGATCT | 1 cut(s) | 358 |
| BlpI | GCTNAGC | 1 cut(s) | 2115 |
| BmcAI | AGTACT | 1 cut(s) | 1010 |
| Bme18I | GGWCC | 9 cut(s) | 765, 1467, 1591, 1618, 1849, 2297, 2577, 2590, 3129 |
| BmeT110I | CYCGRG | 3 cut(s) | 1919, 1958, 2198 |
| BmrI | ACTGGG | 2 cut(s) | 833, 2617 |
| BmuI | ACTGGG | 2 cut(s) | 833, 2617 |
| BpiI | GAAGAC | 2 cut(s) | 1566, 2844 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 499, 531, 3104, 3136 |
| BpmI | CTGGAG | 2 cut(s) | 270, 1635 |
| Bpu10I | CCTNAGC | 3 cut(s) | 1511, 2088, 2680 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 2115 |
| BpuEI | CTTGAG | 5 cut(s) | 725, 2124, 2669, 2700, 3142 |
| BpuMI | CCSGG | 4 cut(s) | 671, 1172, 1700, 1985 |
| Bsa29I | ATCGAT | 3 cut(s) | 27, 552, 1894 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1099 |
| BsaI | GGTCTC | 1 cut(s) | 866 |
| BsaWI | WCCGGW | 5 cut(s) | 181, 322, 817, 3126, 3198 |
| BsaXI | ACNNNNNCTCC | 8 cut(s) | 108, 138, 623, 653, 2400, 2430, 3121, 3151 |
| Bse118I | RCCGGY | 5 cut(s) | 219, 686, 817, 1597, 1885 |
| Bse1I | ACTGG | 8 cut(s) | 230, 544, 760, 828, 1252, 1277, 1689, 2623 |
| Bse21I | CCTNAGG | 2 cut(s) | 1336, 1810 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1099 |
| BseAI | TCCGGA | 2 cut(s) | 181, 3126 |
| BseCI | ATCGAT | 3 cut(s) | 27, 552, 1894 |
| BseGI | GGATG | 4 cut(s) | 305, 862, 1063, 2281 |
| BseJI | GATNNNNATC | 1 cut(s) | 1099 |
| BseNI | ACTGG | 8 cut(s) | 230, 544, 760, 828, 1252, 1277, 1689, 2623 |
| BsePI | GCGCGC | 1 cut(s) | 2319 |
| BseRI | GAGGAG | 9 cut(s) | 1008, 1599, 1638, 1976, 2105, 2184, 2238, 2980, 3008 |
| BseSI | GKGCMC | 8 cut(s) | 161, 274, 355, 832, 1332, 1344, 1393, 1666 |
| BseX3I | CGGCCG | 2 cut(s) | 793, 2157 |
| BseYI | CCCAGC | 2 cut(s) | 160, 612 |
| BsgI | GTGCAG | 1 cut(s) | 718 |
| Bsh1285I | CGRYCG | 7 cut(s) | 687, 796, 1598, 1704, 1971, 2160, 2451 |
| BshNI | GGYRCC | 4 cut(s) | 269, 758, 1273, 3201 |
| BshTI | ACCGGT | 1 cut(s) | 817 |
| BshVI | ATCGAT | 3 cut(s) | 27, 552, 1894 |
| BsiEI | CGRYCG | 7 cut(s) | 687, 796, 1598, 1704, 1971, 2160, 2451 |
| BsiHKAI | GWGCWC | 7 cut(s) | 88, 1110, 1227, 1361, 1609, 1666, 1737 |
| BsiHKCI | CYCGRG | 3 cut(s) | 1919, 1958, 2198 |
| BslFI | GGGAC | 3 cut(s) | 1265, 2066, 2561 |
| BsmAI | GTCTC | 5 cut(s) | 338, 866, 1020, 1456, 2706 |
| BsmBI | CGTCTC | 2 cut(s) | 338, 1020 |
| BsmFI | GGGAC | 3 cut(s) | 1265, 2066, 2561 |
| BsmI | GAATGC | 4 cut(s) | 90, 225, 379, 1939 |
| Bso31I | GGTCTC | 1 cut(s) | 866 |
| BsoBI | CYCGRG | 3 cut(s) | 1919, 1958, 2198 |
| Bsp120I | GGGCCC | 5 cut(s) | 157, 828, 1328, 1340, 1389 |
| Bsp13I | TCCGGA | 2 cut(s) | 181, 3126 |
| Bsp1407I | TGTACA | 1 cut(s) | 1975 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 2115 |
| Bsp19I | CCATGG | 1 cut(s) | 606 |
| Bsp68I | TCGCGA | 1 cut(s) | 2514 |
| BspDI | ATCGAT | 3 cut(s) | 27, 552, 1894 |
| BspEI | TCCGGA | 2 cut(s) | 181, 3126 |
| BspMAI | CTGCAG | 2 cut(s) | 1750, 2286 |
| BspMI | ACCTGC | 2 cut(s) | 2041, 2455 |
| BspPI | GGATC | 9 cut(s) | 907, 920, 1127, 1775, 1822, 2003, 2102, 2535, 2564 |
| BspT107I | GGYRCC | 4 cut(s) | 269, 758, 1273, 3201 |
| BspTI | CTTAAG | 1 cut(s) | 2521 |
| BspTNI | GGTCTC | 1 cut(s) | 866 |
| BsrBI | CCGCTC | 1 cut(s) | 1845 |
| BsrFI | RCCGGY | 5 cut(s) | 219, 686, 817, 1597, 1885 |
| BsrGI | TGTACA | 1 cut(s) | 1975 |
| BsrI | ACTGG | 8 cut(s) | 230, 544, 760, 828, 1252, 1277, 1689, 2623 |
| BssAI | RCCGGY | 5 cut(s) | 219, 686, 817, 1597, 1885 |
| BssHII | GCGCGC | 1 cut(s) | 2319 |
| BssSI | CACGAG | 1 cut(s) | 354 |
| BssT1I | CCWWGG | 1 cut(s) | 606 |
| Bst2BI | CACGAG | 1 cut(s) | 354 |
| Bst4CI | ACNGT | 3 cut(s) | 635, 1118, 1913 |
| Bst6I | CTCTTC | 7 cut(s) | 33, 745, 1505, 1587, 1771, 1923, 3197 |
| BstAFI | CTTAAG | 1 cut(s) | 2521 |
| BstAUI | TGTACA | 1 cut(s) | 1975 |
| BstDSI | CCRYGG | 3 cut(s) | 606, 2154, 3047 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1653 |
| BstF5I | GGATG | 4 cut(s) | 305, 862, 1063, 2281 |
| BstH2I | RGCGCY | 2 cut(s) | 474, 630 |
| BstMAI | GTCTC | 5 cut(s) | 338, 866, 1020, 1456, 2706 |
| BstMCI | CGRYCG | 7 cut(s) | 687, 796, 1598, 1704, 1971, 2160, 2451 |
| BstNSI | RCATGY | 3 cut(s) | 844, 2137, 2724 |
| BstSFI | CTRYAG | 4 cut(s) | 1407, 1746, 2049, 2282 |
| BstSLI | GKGCMC | 8 cut(s) | 161, 274, 355, 832, 1332, 1344, 1393, 1666 |
| BstV2I | GAAGAC | 2 cut(s) | 1566, 2844 |
| BstX2I | RGATCY | 3 cut(s) | 358, 912, 2556 |
| BstYI | RGATCY | 3 cut(s) | 358, 912, 2556 |
| BstZI | CGGCCG | 2 cut(s) | 793, 2157 |
| Bsu15I | ATCGAT | 3 cut(s) | 27, 552, 1894 |
| Bsu36I | CCTNAGG | 2 cut(s) | 1336, 1810 |
| BsuTUI | ATCGAT | 3 cut(s) | 27, 552, 1894 |
| BtgI | CCRYGG | 3 cut(s) | 606, 2154, 3047 |
| BtgZI | GCGATG | 2 cut(s) | 664, 2711 |
| BtsCI | GGATG | 4 cut(s) | 305, 862, 1063, 2281 |
| BtsI | GCAGTG | 1 cut(s) | 1737 |
| BtsIMutI | CAGTG | 5 cut(s) | 537, 640, 753, 1696, 1737 |
| BtuMI | TCGCGA | 1 cut(s) | 2514 |
| BveI | ACCTGC | 2 cut(s) | 2041, 2455 |
| CciNI | GCGGCCGC | 1 cut(s) | 2157 |
| Cfr10I | RCCGGY | 5 cut(s) | 219, 686, 817, 1597, 1885 |
| Cfr42I | CCGCGG | 2 cut(s) | 2157, 3050 |
| ClaI | ATCGAT | 3 cut(s) | 27, 552, 1894 |
| CseI | GACGC | 4 cut(s) | 197, 355, 1412, 2530 |
| CspAI | ACCGGT | 1 cut(s) | 817 |
| CviAII | CATG | 7 cut(s) | 607, 841, 2134, 2360, 2721, 2801, 2999 |
| EaeI | YGGCCR | 5 cut(s) | 302, 574, 793, 1168, 2157 |
| EagI | CGGCCG | 2 cut(s) | 793, 2157 |
| Eam1104I | CTCTTC | 7 cut(s) | 33, 745, 1505, 1587, 1771, 1923, 3197 |
| EarI | CTCTTC | 7 cut(s) | 33, 745, 1505, 1587, 1771, 1923, 3197 |
| EciI | GGCGGA | 3 cut(s) | 705, 926, 3028 |
| Ecl136II | GAGCTC | 2 cut(s) | 1225, 1607 |
| EclXI | CGGCCG | 2 cut(s) | 793, 2157 |
| Eco130I | CCWWGG | 1 cut(s) | 606 |
| Eco24I | GRGCYC | 9 cut(s) | 161, 810, 832, 1227, 1332, 1344, 1393, 1609, 2121 |
| Eco31I | GGTCTC | 1 cut(s) | 866 |
| Eco32I | GATATC | 2 cut(s) | 526, 949 |
| Eco47I | GGWCC | 9 cut(s) | 765, 1467, 1591, 1618, 1849, 2297, 2577, 2590, 3129 |
| Eco47III | AGCGCT | 1 cut(s) | 628 |
| Eco52I | CGGCCG | 2 cut(s) | 793, 2157 |
| Eco53kI | GAGCTC | 2 cut(s) | 1225, 1607 |
| Eco57I | CTGAAG | 3 cut(s) | 1440, 1578, 2963 |
| Eco81I | CCTNAGG | 2 cut(s) | 1336, 1810 |
| Eco88I | CYCGRG | 3 cut(s) | 1919, 1958, 2198 |
| EcoICRI | GAGCTC | 2 cut(s) | 1225, 1607 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1653 |
| EcoO109I | RGGNCCY | 9 cut(s) | 828, 829, 1329, 1340, 1341, 1572, 2297, 2590, 3063 |
| EcoRV | GATATC | 2 cut(s) | 526, 949 |
| EcoT14I | CCWWGG | 1 cut(s) | 606 |
| EcoT22I | ATGCAT | 1 cut(s) | 864 |
| EcoT38I | GRGCYC | 9 cut(s) | 161, 810, 832, 1227, 1332, 1344, 1393, 1609, 2121 |
| ErhI | CCWWGG | 1 cut(s) | 606 |
| Esp3I | CGTCTC | 2 cut(s) | 338, 1020 |
| FaeI | CATG | 7 cut(s) | 610, 844, 2137, 2363, 2724, 2804, 3002 |
| FaqI | GGGAC | 3 cut(s) | 1265, 2066, 2561 |
| FatI | CATG | 7 cut(s) | 606, 840, 2133, 2359, 2720, 2800, 2998 |
| FauI | CCCGC | 9 cut(s) | 342, 654, 960, 1256, 1353, 2020, 2128, 2428, 2996 |
| FbaI | TGATCA | 1 cut(s) | 1899 |
| FblI | GTMKAC | 3 cut(s) | 1410, 3032, 3053 |
| FokI | GGATG | 4 cut(s) | 292, 849, 1070, 2288 |
| FriOI | GRGCYC | 9 cut(s) | 161, 810, 832, 1227, 1332, 1344, 1393, 1609, 2121 |
| FspBI | CTAG | 9 cut(s) | 98, 362, 1128, 1370, 1826, 2315, 2328, 2763, 2774 |
| GsaI | CCCAGC | 2 cut(s) | 164, 616 |
| GsuI | CTGGAG | 2 cut(s) | 270, 1635 |
| HaeII | RGCGCY | 2 cut(s) | 474, 630 |
| HgaI | GACGC | 4 cut(s) | 197, 355, 1412, 2530 |
| Hin1II | CATG | 7 cut(s) | 610, 844, 2137, 2363, 2724, 2804, 3002 |
| HincII | GTYRAC | 1 cut(s) | 592 |
| HindII | GTYRAC | 1 cut(s) | 592 |
| HphI | GGTGA | 5 cut(s) | 379, 589, 1908, 2365, 2647 |
| Hpy166II | GTNNAC | 9 cut(s) | 320, 592, 749, 1411, 1643, 1664, 1916, 3033, 3054 |
| Hpy8I | GTNNAC | 9 cut(s) | 320, 592, 749, 1411, 1643, 1664, 1916, 3033, 3054 |
| Hpy99I | CGWCG | 5 cut(s) | 191, 859, 1406, 1484, 1781 |
| HpyCH4III | ACNGT | 3 cut(s) | 635, 1118, 1913 |
| HpyCH4IV | ACGT | 1 cut(s) | 2079 |
| HpySE526I | ACGT | 1 cut(s) | 2079 |
| Hsp92II | CATG | 7 cut(s) | 610, 844, 2137, 2363, 2724, 2804, 3002 |
| Kpn2I | TCCGGA | 2 cut(s) | 181, 3126 |
| KpnI | GGTACC | 2 cut(s) | 1277, 3205 |
| KroI | GCCGGC | 1 cut(s) | 219 |
| KroNI | GCCGGC | 1 cut(s) | 221 |
| Ksp22I | TGATCA | 1 cut(s) | 1899 |
| KspI | CCGCGG | 2 cut(s) | 2157, 3050 |
| MaeI | CTAG | 9 cut(s) | 98, 362, 1128, 1370, 1826, 2315, 2328, 2763, 2774 |
| MaeII | ACGT | 1 cut(s) | 2079 |
| MaeIII | GTNAC | 3 cut(s) | 1073, 2075, 2635 |
| MbiI | CCGCTC | 1 cut(s) | 1845 |
| MfeI | CAATTG | 2 cut(s) | 1268, 1459 |
| MflI | RGATCY | 3 cut(s) | 358, 912, 2556 |
| MlsI | TGGCCA | 2 cut(s) | 304, 576 |
| MluNI | TGGCCA | 2 cut(s) | 304, 576 |
| MlyI | GAGTC | 6 cut(s) | 238, 578, 1191, 2510, 2977, 3122 |
| MmeI | TCCRAC | 2 cut(s) | 501, 1618 |
| Mox20I | TGGCCA | 2 cut(s) | 304, 576 |
| Mph1103I | ATGCAT | 1 cut(s) | 864 |
| MreI | CGCCGGCG | 1 cut(s) | 219 |
| MroI | TCCGGA | 2 cut(s) | 181, 3126 |
| MroNI | GCCGGC | 1 cut(s) | 219 |
| MscI | TGGCCA | 2 cut(s) | 304, 576 |
| MseI | TTAA | 4 cut(s) | 44, 2430, 2522, 2895 |
| Msp20I | TGGCCA | 2 cut(s) | 304, 576 |
| MspA1I | CMGCKG | 5 cut(s) | 2123, 2156, 2162, 2287, 3049 |
| MspCI | CTTAAG | 1 cut(s) | 2521 |
| MunI | CAATTG | 2 cut(s) | 1268, 1459 |
| Mva1269I | GAATGC | 4 cut(s) | 90, 225, 379, 1939 |
| NaeI | GCCGGC | 1 cut(s) | 221 |
| NciI | CCSGG | 4 cut(s) | 671, 1172, 1700, 1985 |
| NcoI | CCATGG | 1 cut(s) | 606 |
| NgoMIV | GCCGGC | 1 cut(s) | 219 |
| NlaIII | CATG | 7 cut(s) | 610, 844, 2137, 2363, 2724, 2804, 3002 |
| NmeAIII | GCCGAG | 2 cut(s) | 2041, 2440 |
| NmuCI | GTSAC | 2 cut(s) | 1073, 2635 |
| NotI | GCGGCCGC | 1 cut(s) | 2157 |
| NruI | TCGCGA | 1 cut(s) | 2514 |
| NsiI | ATGCAT | 1 cut(s) | 864 |
| NspI | RCATGY | 3 cut(s) | 844, 2137, 2724 |
| PaeI | GCATGC | 3 cut(s) | 844, 2137, 2724 |
| PalAI | GGCGCGCC | 1 cut(s) | 2319 |
| PasI | CCCWGGG | 1 cut(s) | 1866 |
| PauI | GCGCGC | 1 cut(s) | 2319 |
| PctI | GAATGC | 4 cut(s) | 90, 225, 379, 1939 |
| PdiI | GCCGGC | 1 cut(s) | 221 |
| PfeI | GAWTC | 6 cut(s) | 1095, 1323, 1516, 1742, 1757, 2906 |
| PflFI | GACNNNGTC | 2 cut(s) | 587, 1262 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 2629 |
| PfoI | TCCNGGA | 1 cut(s) | 247 |
| PinAI | ACCGGT | 1 cut(s) | 817 |
| Ple19I | CGATCG | 1 cut(s) | 1971 |
| PleI | GAGTC | 6 cut(s) | 238, 578, 1191, 2510, 2976, 3121 |
| PpsI | GAGTC | 6 cut(s) | 238, 578, 1191, 2510, 2976, 3121 |
| PpuMI | RGGWCCY | 2 cut(s) | 2297, 2590 |
| PshBI | ATTAAT | 1 cut(s) | 2430 |
| Psp124BI | GAGCTC | 2 cut(s) | 1227, 1609 |
| Psp5II | RGGWCCY | 2 cut(s) | 2297, 2590 |
| PspFI | CCCAGC | 2 cut(s) | 160, 612 |
| PspOMI | GGGCCC | 5 cut(s) | 157, 828, 1328, 1340, 1389 |
| PspPPI | RGGWCCY | 2 cut(s) | 2297, 2590 |
| PstI | CTGCAG | 2 cut(s) | 1750, 2286 |
| PsuI | RGATCY | 3 cut(s) | 358, 912, 2556 |
| PsyI | GACNNNGTC | 2 cut(s) | 587, 1262 |
| PteI | GCGCGC | 1 cut(s) | 2319 |
| PvuI | CGATCG | 1 cut(s) | 1971 |
| RruI | TCGCGA | 1 cut(s) | 2514 |
| SacI | GAGCTC | 2 cut(s) | 1227, 1609 |
| SacII | CCGCGG | 2 cut(s) | 2157, 3050 |
| SaqAI | TTAA | 4 cut(s) | 44, 2430, 2522, 2895 |
| ScaI | AGTACT | 1 cut(s) | 1010 |
| SchI | GAGTC | 6 cut(s) | 238, 578, 1191, 2510, 2977, 3122 |
| SfcI | CTRYAG | 4 cut(s) | 1407, 1746, 2049, 2282 |
| Sfr303I | CCGCGG | 2 cut(s) | 2157, 3050 |
| SgrAI | CRCCGGYG | 1 cut(s) | 219 |
| SgrBI | CCGCGG | 2 cut(s) | 2157, 3050 |
| SgsI | GGCGCGCC | 1 cut(s) | 2319 |
| SinI | GGWCC | 9 cut(s) | 765, 1467, 1591, 1618, 1849, 2297, 2577, 2590, 3129 |
| SmlI | CTYRAG | 6 cut(s) | 704, 2139, 2521, 2648, 2715, 3157 |
| SmoI | CTYRAG | 6 cut(s) | 704, 2139, 2521, 2648, 2715, 3157 |
| SphI | GCATGC | 3 cut(s) | 844, 2137, 2724 |
| SspI | AATATT | 1 cut(s) | 2342 |
| SspMI | CTAG | 9 cut(s) | 98, 362, 1128, 1370, 1826, 2315, 2328, 2763, 2774 |
| SstI | GAGCTC | 2 cut(s) | 1227, 1609 |
| StyI | CCWWGG | 1 cut(s) | 606 |
| TaaI | ACNGT | 3 cut(s) | 635, 1118, 1913 |
| TaiI | ACGT | 1 cut(s) | 2082 |
| TaqII | GACCGA | 1 cut(s) | 1606 |
| TatI | WGTACW | 3 cut(s) | 1008, 1047, 1975 |
| TauI | GCSGC | 9 cut(s) | 798, 999, 1205, 1845, 2156, 2159, 2162, 2290, 2487 |
| TfiI | GAWTC | 6 cut(s) | 1095, 1323, 1516, 1742, 1757, 2906 |
| Tru1I | TTAA | 4 cut(s) | 44, 2430, 2522, 2895 |
| Tru9I | TTAA | 4 cut(s) | 44, 2430, 2522, 2895 |
| TscAI | CASTG | 5 cut(s) | 544, 640, 760, 1696, 1737 |
| TseFI | GTSAC | 2 cut(s) | 1073, 2635 |
| Tsp45I | GTSAC | 2 cut(s) | 1073, 2635 |
| TspDTI | ATGAA | 7 cut(s) | 83, 101, 715, 1893, 2376, 2793, 3186 |
| TspGWI | ACGGA | 4 cut(s) | 1428, 1444, 2440, 2569 |
| TspRI | CASTG | 5 cut(s) | 544, 640, 760, 1696, 1737 |
| Tth111I | GACNNNGTC | 2 cut(s) | 587, 1262 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 2629 |
| Vha464I | CTTAAG | 1 cut(s) | 2521 |
| VneI | GTGCAC | 1 cut(s) | 1662 |
| VpaK11BI | GGWCC | 9 cut(s) | 765, 1467, 1591, 1618, 1849, 2297, 2577, 2590, 3129 |
| VspI | ATTAAT | 1 cut(s) | 2430 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1653 |
| XapI | RAATTY | 2 cut(s) | 2384, 2707 |
| XbaI | TCTAGA | 2 cut(s) | 97, 2773 |
| XceI | RCATGY | 3 cut(s) | 844, 2137, 2724 |
| XmiI | GTMKAC | 3 cut(s) | 1410, 3032, 3053 |
| XspI | CTAG | 9 cut(s) | 98, 362, 1128, 1370, 1826, 2315, 2328, 2763, 2774 |
| ZrmI | AGTACT | 1 cut(s) | 1010 |
| Zsp2I | ATGCAT | 1 cut(s) | 864 |