Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 1547 |
| AbsI | CCTCGAGG | 1 cut(s) | 2045 |
| Acc36I | ACCTGC | 5 cut(s) | 275, 480, 1547, 1780, 2459 |
| AccB1I | GGYRCC | 5 cut(s) | 83, 731, 1221, 2005, 2051 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 1574, 2374 |
| AccBSI | CCGCTC | 1 cut(s) | 1007 |
| AccI | GTMKAC | 1 cut(s) | 1947 |
| AclWI | GGATC | 1 cut(s) | 1640 |
| AcoI | YGGCCR | 5 cut(s) | 206, 403, 478, 1398, 1581 |
| AcuI | CTGAAG | 3 cut(s) | 1347, 2082, 2264 |
| AcyI | GRCGYC | 3 cut(s) | 1222, 1953, 2006 |
| AfaI | GTAC | 7 cut(s) | 614, 640, 914, 974, 1818, 1845, 2361 |
| AfeI | AGCGCT | 1 cut(s) | 2137 |
| AgeI | ACCGGT | 1 cut(s) | 521 |
| AgsI | TTSAA | 8 cut(s) | 138, 821, 1016, 1542, 1616, 1799, 1865, 1925 |
| AhlI | ACTAGT | 1 cut(s) | 721 |
| AjiI | CACGTC | 1 cut(s) | 1725 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1701, 1733 |
| AluBI | AGCT | 9 cut(s) | 232, 1129, 1447, 1603, 1913, 2089, 2384, 2393, 2446 |
| AluI | AGCT | 9 cut(s) | 232, 1129, 1447, 1603, 1913, 2089, 2384, 2393, 2446 |
| Alw21I | GWGCWC | 8 cut(s) | 178, 259, 535, 1039, 1449, 1610, 1750, 2448 |
| Alw26I | GTCTC | 4 cut(s) | 109, 770, 1360, 2062 |
| Alw44I | GTGCAC | 1 cut(s) | 174 |
| AlwI | GGATC | 1 cut(s) | 1640 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 1574, 1847 |
| Ama87I | CYCGRG | 2 cut(s) | 2045, 2385 |
| Aor51HI | AGCGCT | 1 cut(s) | 2137 |
| ApaI | GGGCCC | 1 cut(s) | 1985 |
| ApaLI | GTGCAC | 1 cut(s) | 174 |
| ApeKI | GCWGC | 4 cut(s) | 350, 2095, 2348, 2393 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 1376, 1408, 1645, 1677 |
| AsiGI | ACCGGT | 1 cut(s) | 521 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1965 |
| AsuC2I | CCSGG | 4 cut(s) | 151, 1032, 1580, 2287 |
| AsuHPI | GGTGA | 8 cut(s) | 31, 333, 427, 493, 571, 1111, 1775, 2222 |
| AsuII | TTCGAA | 1 cut(s) | 1407 |
| AvaI | CYCGRG | 2 cut(s) | 2045, 2385 |
| AvaII | GGWCC | 4 cut(s) | 1244, 1320, 2233, 2262 |
| BaeGI | GKGCMC | 5 cut(s) | 88, 178, 736, 1985, 2054 |
| BalI | TGGCCA | 2 cut(s) | 405, 480 |
| BanI | GGYRCC | 5 cut(s) | 83, 731, 1221, 2005, 2051 |
| BanII | GRGCYC | 6 cut(s) | 468, 1449, 1516, 1985, 2115, 2448 |
| BauI | CACGAG | 2 cut(s) | 258, 2131 |
| BbsI | GAAGAC | 2 cut(s) | 1958, 2482 |
| Bbv12I | GWGCWC | 8 cut(s) | 178, 259, 535, 1039, 1449, 1610, 1750, 2448 |
| BbvCI | CCTCAGC | 1 cut(s) | 1878 |
| BbvI | GCAGC | 4 cut(s) | 337, 2107, 2335, 2380 |
| BccI | CCATC | 6 cut(s) | 308, 452, 461, 877, 1409, 1554 |
| BceAI | ACGGC | 3 cut(s) | 193, 699, 955 |
| BclI | TGATCA | 2 cut(s) | 21, 1336 |
| BcnI | CCSGG | 4 cut(s) | 151, 1032, 1580, 2287 |
| BcoDI | GTCTC | 4 cut(s) | 109, 770, 1360, 2062 |
| BcuI | ACTAGT | 1 cut(s) | 721 |
| BfaI | CTAG | 6 cut(s) | 677, 713, 722, 780, 2307, 2427 |
| BfoI | RGCGCY | 3 cut(s) | 1225, 2009, 2139 |
| BfuAI | ACCTGC | 5 cut(s) | 275, 480, 1547, 1780, 2459 |
| BglI | GCCNNNNNGGC | 5 cut(s) | 512, 1161, 1230, 1980, 2282 |
| BlpI | GCTNAGC | 1 cut(s) | 1604 |
| BmcAI | AGTACT | 2 cut(s) | 614, 1818 |
| Bme18I | GGWCC | 4 cut(s) | 1244, 1320, 2233, 2262 |
| BmeT110I | CYCGRG | 2 cut(s) | 2045, 2385 |
| BmgBI | CACGTC | 1 cut(s) | 1725 |
| BmrI | ACTGGG | 1 cut(s) | 1300 |
| BmsI | GCATC | 6 cut(s) | 63, 775, 865, 1186, 1420, 2413 |
| BmuI | ACTGGG | 1 cut(s) | 1300 |
| BoxI | GACNNNNGTC | 1 cut(s) | 2297 |
| BpiI | GAAGAC | 2 cut(s) | 1958, 2482 |
| BplI | GAGNNNNNCTC | 6 cut(s) | 926, 958, 1613, 1645, 2025, 2057 |
| BpmI | CTGGAG | 3 cut(s) | 629, 1390, 1551 |
| Bpu10I | CCTNAGC | 2 cut(s) | 1824, 1878 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1604 |
| Bpu14I | TTCGAA | 1 cut(s) | 1407 |
| BpuEI | CTTGAG | 1 cut(s) | 2124 |
| BpuMI | CCSGG | 4 cut(s) | 151, 1032, 1580, 2287 |
| Bsa29I | ATCGAT | 3 cut(s) | 27, 303, 456 |
| BsaBI | GATNNNNATC | 2 cut(s) | 1335, 1644 |
| BsaHI | GRCGYC | 3 cut(s) | 1222, 1953, 2006 |
| BsaI | GGTCTC | 1 cut(s) | 109 |
| BsaJI | CCNNGG | 8 cut(s) | 66, 510, 551, 1272, 1673, 1999, 2000, 2418 |
| BsaWI | WCCGGW | 1 cut(s) | 521 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 527, 557, 1231, 1261 |
| Bse118I | RCCGGY | 2 cut(s) | 521, 1703 |
| Bse3DI | GCAATG | 1 cut(s) | 589 |
| Bse8I | GATNNNNATC | 2 cut(s) | 1335, 1644 |
| BseCI | ATCGAT | 3 cut(s) | 27, 303, 456 |
| BseDI | CCNNGG | 8 cut(s) | 66, 510, 551, 1272, 1673, 1999, 2000, 2418 |
| BseGI | GGATG | 2 cut(s) | 766, 2428 |
| BseJI | GATNNNNATC | 2 cut(s) | 1335, 1644 |
| BseMI | GCAATG | 1 cut(s) | 589 |
| BseMII | CTCAG | 7 cut(s) | 142, 924, 1406, 1595, 1815, 1869, 2021 |
| BsePI | GCGCGC | 1 cut(s) | 2195 |
| BseRI | GAGGAG | 8 cut(s) | 999, 1239, 1618, 1621, 1684, 1767, 1820, 2033 |
| BseSI | GKGCMC | 5 cut(s) | 88, 178, 736, 1985, 2054 |
| BseX3I | CGGCCG | 1 cut(s) | 1581 |
| BseXI | GCAGC | 4 cut(s) | 337, 2107, 2335, 2380 |
| BseYI | CCCAGC | 1 cut(s) | 727 |
| Bsh1285I | CGRYCG | 3 cut(s) | 526, 1584, 2244 |
| BshNI | GGYRCC | 5 cut(s) | 83, 731, 1221, 2005, 2051 |
| BshTI | ACCGGT | 1 cut(s) | 521 |
| BshVI | ATCGAT | 3 cut(s) | 27, 303, 456 |
| BsiEI | CGRYCG | 3 cut(s) | 526, 1584, 2244 |
| BsiHKAI | GWGCWC | 8 cut(s) | 178, 259, 535, 1039, 1449, 1610, 1750, 2448 |
| BsiHKCI | CYCGRG | 2 cut(s) | 2045, 2385 |
| BsiSI | CCGG | 7 cut(s) | 150, 522, 1032, 1225, 1580, 1704, 2287 |
| BslFI | GGGAC | 6 cut(s) | 777, 1292, 1333, 2246, 2248, 2350 |
| BsmAI | GTCTC | 4 cut(s) | 109, 770, 1360, 2062 |
| BsmBI | CGTCTC | 1 cut(s) | 2062 |
| BsmFI | GGGAC | 6 cut(s) | 777, 1292, 1333, 2246, 2248, 2350 |
| Bso31I | GGTCTC | 1 cut(s) | 109 |
| BsoBI | CYCGRG | 2 cut(s) | 2045, 2385 |
| Bsp119I | TTCGAA | 1 cut(s) | 1407 |
| Bsp120I | GGGCCC | 1 cut(s) | 1981 |
| Bsp143I | GATC | 8 cut(s) | 21, 28, 1080, 1279, 1336, 1645, 2065, 2241 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1604 |
| Bsp19I | CCATGG | 1 cut(s) | 510 |
| Bsp68I | TCGCGA | 2 cut(s) | 903, 2076 |
| BspCNI | CTCAG | 7 cut(s) | 141, 925, 1407, 1596, 1816, 1870, 2022 |
| BspDI | ATCGAT | 3 cut(s) | 27, 303, 456 |
| BspMI | ACCTGC | 5 cut(s) | 275, 480, 1547, 1780, 2459 |
| BspPI | GGATC | 1 cut(s) | 1640 |
| BspT104I | TTCGAA | 1 cut(s) | 1407 |
| BspT107I | GGYRCC | 5 cut(s) | 83, 731, 1221, 2005, 2051 |
| BspTNI | GGTCTC | 1 cut(s) | 109 |
| BsrBI | CCGCTC | 1 cut(s) | 1007 |
| BsrDI | GCAATG | 1 cut(s) | 589 |
| BsrFI | RCCGGY | 2 cut(s) | 521, 1703 |
| BssAI | RCCGGY | 2 cut(s) | 521, 1703 |
| BssECI | CCNNGG | 8 cut(s) | 66, 510, 551, 1272, 1673, 1999, 2000, 2418 |
| BssHII | GCGCGC | 1 cut(s) | 2195 |
| BssMI | GATC | 8 cut(s) | 21, 28, 1080, 1279, 1336, 1645, 2065, 2241 |
| BssNI | GRCGYC | 3 cut(s) | 1222, 1953, 2006 |
| BssSI | CACGAG | 2 cut(s) | 258, 2131 |
| BssT1I | CCWWGG | 1 cut(s) | 510 |
| Bst2BI | CACGAG | 2 cut(s) | 258, 2131 |
| Bst4CI | ACNGT | 5 cut(s) | 329, 1657, 1908, 2056, 2364 |
| Bst6I | CTCTTC | 2 cut(s) | 678, 1397 |
| BstACI | GRCGYC | 3 cut(s) | 1222, 1953, 2006 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 967 |
| BstBI | TTCGAA | 1 cut(s) | 1407 |
| BstDEI | CTNAG | 7 cut(s) | 128, 933, 1415, 1604, 1824, 1878, 2030 |
| BstDSI | CCRYGG | 3 cut(s) | 510, 551, 2418 |
| BstEII | GGTNACC | 2 cut(s) | 559, 2210 |
| BstF5I | GGATG | 2 cut(s) | 766, 2428 |
| BstH2I | RGCGCY | 3 cut(s) | 1225, 2009, 2139 |
| BstKTI | GATC | 8 cut(s) | 24, 31, 1083, 1282, 1339, 1648, 2068, 2244 |
| BstMAI | GTCTC | 4 cut(s) | 109, 770, 1360, 2062 |
| BstMBI | GATC | 8 cut(s) | 21, 28, 1080, 1279, 1336, 1645, 2065, 2241 |
| BstMCI | CGRYCG | 3 cut(s) | 526, 1584, 2244 |
| BstNSI | RCATGY | 1 cut(s) | 1267 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 2297 |
| BstPI | GGTNACC | 2 cut(s) | 559, 2210 |
| BstSLI | GKGCMC | 5 cut(s) | 88, 178, 736, 1985, 2054 |
| BstV1I | GCAGC | 4 cut(s) | 337, 2107, 2335, 2380 |
| BstV2I | GAAGAC | 2 cut(s) | 1958, 2482 |
| BstZI | CGGCCG | 1 cut(s) | 1581 |
| Bsu15I | ATCGAT | 3 cut(s) | 27, 303, 456 |
| BsuTUI | ATCGAT | 3 cut(s) | 27, 303, 456 |
| BtgI | CCRYGG | 3 cut(s) | 510, 551, 2418 |
| BtgZI | GCGATG | 2 cut(s) | 40, 1532 |
| BtrI | CACGTC | 1 cut(s) | 1725 |
| BtsCI | GGATG | 2 cut(s) | 766, 2428 |
| BtsI | GCAGTG | 2 cut(s) | 535, 2301 |
| BtsIMutI | CAGTG | 4 cut(s) | 535, 657, 1572, 2301 |
| BtuMI | TCGCGA | 2 cut(s) | 903, 2076 |
| BveI | ACCTGC | 5 cut(s) | 275, 480, 1547, 1780, 2459 |
| CaiI | CAGNNNCTG | 2 cut(s) | 1574, 1847 |
| Cfr10I | RCCGGY | 2 cut(s) | 521, 1703 |
| Cfr42I | CCGCGG | 2 cut(s) | 554, 2421 |
| ClaI | ATCGAT | 3 cut(s) | 27, 303, 456 |
| CseI | GACGC | 1 cut(s) | 1961 |
| CsiI | ACCWGGT | 1 cut(s) | 1039 |
| Csp6I | GTAC | 7 cut(s) | 613, 639, 913, 973, 1817, 1844, 2360 |
| CspAI | ACCGGT | 1 cut(s) | 521 |
| CviAII | CATG | 9 cut(s) | 476, 511, 962, 1264, 1460, 1781, 1937, 2318, 2465 |
| CviQI | GTAC | 7 cut(s) | 613, 639, 913, 973, 1817, 1844, 2360 |
| DdeI | CTNAG | 7 cut(s) | 128, 933, 1415, 1604, 1824, 1878, 2030 |
| DinI | GGCGCC | 2 cut(s) | 1223, 2007 |
| DpnI | GATC | 8 cut(s) | 23, 30, 1082, 1281, 1338, 1647, 2067, 2243 |
| DpnII | GATC | 8 cut(s) | 21, 28, 1080, 1279, 1336, 1645, 2065, 2241 |
| EaeI | YGGCCR | 5 cut(s) | 206, 403, 478, 1398, 1581 |
| EagI | CGGCCG | 1 cut(s) | 1581 |
| Eam1104I | CTCTTC | 2 cut(s) | 678, 1397 |
| EarI | CTCTTC | 2 cut(s) | 678, 1397 |
| EciI | GGCGGA | 1 cut(s) | 830 |
| Ecl136II | GAGCTC | 2 cut(s) | 1447, 2446 |
| EclXI | CGGCCG | 1 cut(s) | 1581 |
| Eco130I | CCWWGG | 1 cut(s) | 510 |
| Eco24I | GRGCYC | 6 cut(s) | 468, 1449, 1516, 1985, 2115, 2448 |
| Eco31I | GGTCTC | 1 cut(s) | 109 |
| Eco32I | GATATC | 3 cut(s) | 430, 1303, 1421 |
| Eco47I | GGWCC | 4 cut(s) | 1244, 1320, 2233, 2262 |
| Eco47III | AGCGCT | 1 cut(s) | 2137 |
| Eco52I | CGGCCG | 1 cut(s) | 1581 |
| Eco53kI | GAGCTC | 2 cut(s) | 1447, 2446 |
| Eco57I | CTGAAG | 3 cut(s) | 1347, 2082, 2264 |
| Eco88I | CYCGRG | 2 cut(s) | 2045, 2385 |
| Eco91I | GGTNACC | 2 cut(s) | 559, 2210 |
| EcoICRI | GAGCTC | 2 cut(s) | 1447, 2446 |
| EcoO109I | RGGNCCY | 5 cut(s) | 1982, 2170, 2233, 2262, 2275 |
| EcoO65I | GGTNACC | 2 cut(s) | 559, 2210 |
| EcoRV | GATATC | 3 cut(s) | 430, 1303, 1421 |
| EcoT14I | CCWWGG | 1 cut(s) | 510 |
| EcoT22I | ATGCAT | 1 cut(s) | 768 |
| EcoT38I | GRGCYC | 6 cut(s) | 468, 1449, 1516, 1985, 2115, 2448 |
| EgeI | GGCGCC | 2 cut(s) | 1223, 2007 |
| EheI | GGCGCC | 2 cut(s) | 1223, 2007 |
| ErhI | CCWWGG | 1 cut(s) | 510 |
| Esp3I | CGTCTC | 1 cut(s) | 2062 |
| FaeI | CATG | 9 cut(s) | 479, 514, 965, 1267, 1463, 1784, 1940, 2321, 2468 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 27, 59 |
| FaqI | GGGAC | 6 cut(s) | 777, 1292, 1333, 2246, 2248, 2350 |
| FatI | CATG | 9 cut(s) | 475, 510, 961, 1263, 1459, 1780, 1936, 2317, 2464 |
| FauI | CCCGC | 4 cut(s) | 95, 1012, 1513, 2017 |
| FbaI | TGATCA | 2 cut(s) | 21, 1336 |
| FblI | GTMKAC | 1 cut(s) | 1947 |
| FokI | GGATG | 2 cut(s) | 753, 2435 |
| FriOI | GRGCYC | 6 cut(s) | 468, 1449, 1516, 1985, 2115, 2448 |
| FspBI | CTAG | 6 cut(s) | 677, 713, 722, 780, 2307, 2427 |
| GsaI | CCCAGC | 1 cut(s) | 731 |
| GsuI | CTGGAG | 3 cut(s) | 629, 1390, 1551 |
| HaeII | RGCGCY | 3 cut(s) | 1225, 2009, 2139 |
| HapII | CCGG | 7 cut(s) | 150, 522, 1032, 1225, 1580, 1704, 2287 |
| HgaI | GACGC | 1 cut(s) | 1961 |
| Hin1I | GRCGYC | 3 cut(s) | 1222, 1953, 2006 |
| Hin1II | CATG | 9 cut(s) | 479, 514, 965, 1267, 1463, 1784, 1940, 2321, 2468 |
| HincII | GTYRAC | 3 cut(s) | 1363, 2083, 2292 |
| HindII | GTYRAC | 3 cut(s) | 1363, 2083, 2292 |
| HpaI | GTTAAC | 1 cut(s) | 1363 |
| HpaII | CCGG | 7 cut(s) | 150, 522, 1032, 1225, 1580, 1704, 2287 |
| HphI | GGTGA | 8 cut(s) | 31, 333, 427, 493, 571, 1111, 1775, 2222 |
| Hpy166II | GTNNAC | 6 cut(s) | 176, 1363, 1896, 1948, 2083, 2292 |
| Hpy188I | TCNGA | 9 cut(s) | 493, 874, 934, 1093, 1636, 1674, 2031, 2062, 2492 |
| Hpy8I | GTNNAC | 6 cut(s) | 176, 1363, 1896, 1948, 2083, 2292 |
| Hpy99I | CGWCG | 3 cut(s) | 851, 1665, 1955 |
| HpyCH4III | ACNGT | 5 cut(s) | 329, 1657, 1908, 2056, 2364 |
| HpyCH4IV | ACGT | 1 cut(s) | 1724 |
| HpyCH4V | TGCA | 7 cut(s) | 176, 475, 624, 766, 961, 2095, 2468 |
| HpyF3I | CTNAG | 7 cut(s) | 128, 933, 1415, 1604, 1824, 1878, 2030 |
| HpySE526I | ACGT | 1 cut(s) | 1724 |
| Hsp92I | GRCGYC | 3 cut(s) | 1222, 1953, 2006 |
| Hsp92II | CATG | 9 cut(s) | 479, 514, 965, 1267, 1463, 1784, 1940, 2321, 2468 |
| KasI | GGCGCC | 2 cut(s) | 1221, 2005 |
| KroI | GCCGGC | 1 cut(s) | 1703 |
| KroNI | GCCGGC | 1 cut(s) | 1705 |
| Ksp22I | TGATCA | 2 cut(s) | 21, 1336 |
| KspAI | GTTAAC | 1 cut(s) | 1363 |
| KspI | CCGCGG | 2 cut(s) | 554, 2421 |
| Kzo9I | GATC | 8 cut(s) | 21, 28, 1080, 1279, 1336, 1645, 2065, 2241 |
| Lsp1109I | GCAGC | 4 cut(s) | 337, 2107, 2335, 2380 |
| LweI | GCATC | 6 cut(s) | 63, 775, 865, 1186, 1420, 2413 |
| MabI | ACCWGGT | 1 cut(s) | 1039 |
| MaeI | CTAG | 6 cut(s) | 677, 713, 722, 780, 2307, 2427 |
| MaeII | ACGT | 1 cut(s) | 1724 |
| MaeIII | GTNAC | 5 cut(s) | 559, 1927, 2128, 2210, 2299 |
| MalI | GATC | 8 cut(s) | 23, 30, 1082, 1281, 1338, 1647, 2067, 2243 |
| MbiI | CCGCTC | 1 cut(s) | 1007 |
| MboI | GATC | 8 cut(s) | 21, 28, 1080, 1279, 1336, 1645, 2065, 2241 |
| MfeI | CAATTG | 1 cut(s) | 1172 |
| MlsI | TGGCCA | 2 cut(s) | 405, 480 |
| MluCI | AATT | 5 cut(s) | 482, 1172, 2069, 2200, 2330 |
| MluNI | TGGCCA | 2 cut(s) | 405, 480 |
| Mly113I | GGCGCC | 2 cut(s) | 1222, 2006 |
| MlyI | GAGTC | 3 cut(s) | 81, 664, 1619 |
| MmeI | TCCRAC | 2 cut(s) | 405, 1663 |
| Mox20I | TGGCCA | 2 cut(s) | 405, 480 |
| Mph1103I | ATGCAT | 1 cut(s) | 768 |
| MreI | CGCCGGCG | 1 cut(s) | 1703 |
| MroNI | GCCGGC | 1 cut(s) | 1703 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1965 |
| MscI | TGGCCA | 2 cut(s) | 405, 480 |
| MseI | TTAA | 6 cut(s) | 983, 1238, 1362, 1440, 1994, 2258 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1464 |
| Msp20I | TGGCCA | 2 cut(s) | 405, 480 |
| MspA1I | CMGCKG | 6 cut(s) | 90, 540, 553, 1325, 2089, 2420 |
| MspI | CCGG | 7 cut(s) | 150, 522, 1032, 1225, 1580, 1704, 2287 |
| MunI | CAATTG | 1 cut(s) | 1172 |
| NaeI | GCCGGC | 1 cut(s) | 1705 |
| NarI | GGCGCC | 2 cut(s) | 1222, 2006 |
| NciI | CCSGG | 4 cut(s) | 151, 1032, 1580, 2287 |
| NcoI | CCATGG | 1 cut(s) | 510 |
| NdeII | GATC | 8 cut(s) | 21, 28, 1080, 1279, 1336, 1645, 2065, 2241 |
| NgoMIV | GCCGGC | 1 cut(s) | 1703 |
| NlaIII | CATG | 9 cut(s) | 479, 514, 965, 1267, 1463, 1784, 1940, 2321, 2468 |
| NmuCI | GTSAC | 5 cut(s) | 559, 1927, 2128, 2210, 2299 |
| NruI | TCGCGA | 2 cut(s) | 903, 2076 |
| NsiI | ATGCAT | 1 cut(s) | 768 |
| NspI | RCATGY | 1 cut(s) | 1267 |
| NspV | TTCGAA | 1 cut(s) | 1407 |
| PaeI | GCATGC | 1 cut(s) | 1267 |
| PaeR7I | CTCGAG | 2 cut(s) | 2045, 2385 |
| PaqCI | CACCTGC | 1 cut(s) | 1547 |
| PasI | CCCWGGG | 1 cut(s) | 2000 |
| PauI | GCGCGC | 1 cut(s) | 2195 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 1507, 2052 |
| PdiI | GCCGGC | 1 cut(s) | 1705 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1965 |
| PfeI | GAWTC | 7 cut(s) | 334, 488, 802, 817, 999, 1883, 2269 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 1574, 2374 |
| PfoI | TCCNGGA | 2 cut(s) | 606, 1030 |
| PinAI | ACCGGT | 1 cut(s) | 521 |
| Ple19I | CGATCG | 1 cut(s) | 2244 |
| PleI | GAGTC | 3 cut(s) | 80, 664, 1619 |
| PluTI | GGCGCC | 2 cut(s) | 1225, 2009 |
| PpsI | GAGTC | 3 cut(s) | 80, 664, 1619 |
| PpuMI | RGGWCCY | 2 cut(s) | 2233, 2262 |
| PshAI | GACNNNNGTC | 1 cut(s) | 2297 |
| Psp124BI | GAGCTC | 2 cut(s) | 1449, 2448 |
| Psp5II | RGGWCCY | 2 cut(s) | 2233, 2262 |
| PspEI | GGTNACC | 2 cut(s) | 559, 2210 |
| PspFI | CCCAGC | 1 cut(s) | 727 |
| PspOMI | GGGCCC | 1 cut(s) | 1981 |
| PspPPI | RGGWCCY | 2 cut(s) | 2233, 2262 |
| PspXI | VCTCGAGB | 2 cut(s) | 2045, 2385 |
| PstNI | CAGNNNCTG | 2 cut(s) | 1574, 1847 |
| PteI | GCGCGC | 1 cut(s) | 2195 |
| PvuI | CGATCG | 1 cut(s) | 2244 |
| PvuII | CAGCTG | 1 cut(s) | 2089 |
| RruI | TCGCGA | 2 cut(s) | 903, 2076 |
| RsaI | GTAC | 7 cut(s) | 614, 640, 914, 974, 1818, 1845, 2361 |
| RsaNI | GTAC | 7 cut(s) | 613, 639, 913, 973, 1817, 1844, 2360 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1464 |
| SacI | GAGCTC | 2 cut(s) | 1449, 2448 |
| SacII | CCGCGG | 2 cut(s) | 554, 2421 |
| SaqAI | TTAA | 6 cut(s) | 983, 1238, 1362, 1440, 1994, 2258 |
| Sau3AI | GATC | 8 cut(s) | 21, 28, 1080, 1279, 1336, 1645, 2065, 2241 |
| ScaI | AGTACT | 2 cut(s) | 614, 1818 |
| SchI | GAGTC | 3 cut(s) | 81, 664, 1619 |
| SexAI | ACCWGGT | 1 cut(s) | 1039 |
| SfaNI | GCATC | 6 cut(s) | 63, 775, 865, 1186, 1420, 2413 |
| SfiI | GGCCNNNNNGGCC | 1 cut(s) | 2282 |
| SfoI | GGCGCC | 2 cut(s) | 1223, 2007 |
| Sfr274I | CTCGAG | 2 cut(s) | 2045, 2385 |
| Sfr303I | CCGCGG | 2 cut(s) | 554, 2421 |
| SfuI | TTCGAA | 1 cut(s) | 1407 |
| SgrAI | CRCCGGYG | 1 cut(s) | 1703 |
| SgrBI | CCGCGG | 2 cut(s) | 554, 2421 |
| SinI | GGWCC | 4 cut(s) | 1244, 1320, 2233, 2262 |
| SlaI | CTCGAG | 2 cut(s) | 2045, 2385 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1464 |
| SmlI | CTYRAG | 3 cut(s) | 2045, 2139, 2385 |
| SmoI | CTYRAG | 3 cut(s) | 2045, 2139, 2385 |
| SpeI | ACTAGT | 1 cut(s) | 721 |
| SphI | GCATGC | 1 cut(s) | 1267 |
| Sse9I | AATT | 5 cut(s) | 482, 1172, 2069, 2200, 2330 |
| SspDI | GGCGCC | 2 cut(s) | 1221, 2005 |
| SspMI | CTAG | 6 cut(s) | 677, 713, 722, 780, 2307, 2427 |
| SstI | GAGCTC | 2 cut(s) | 1449, 2448 |
| StyI | CCWWGG | 1 cut(s) | 510 |
| TaaI | ACNGT | 5 cut(s) | 329, 1657, 1908, 2056, 2364 |
| TaiI | ACGT | 1 cut(s) | 1727 |
| TaqII | GACCGA | 1 cut(s) | 2168 |
| TasI | AATT | 5 cut(s) | 482, 1172, 2069, 2200, 2330 |
| TatI | WGTACW | 3 cut(s) | 612, 638, 1816 |
| TfiI | GAWTC | 7 cut(s) | 334, 488, 802, 817, 999, 1883, 2269 |
| Tru1I | TTAA | 6 cut(s) | 983, 1238, 1362, 1440, 1994, 2258 |
| Tru9I | TTAA | 6 cut(s) | 983, 1238, 1362, 1440, 1994, 2258 |
| TscAI | CASTG | 4 cut(s) | 535, 664, 1579, 2308 |
| TseFI | GTSAC | 5 cut(s) | 559, 1927, 2128, 2210, 2299 |
| TseI | GCWGC | 4 cut(s) | 350, 2095, 2348, 2393 |
| Tsp45I | GTSAC | 5 cut(s) | 559, 1927, 2128, 2210, 2299 |
| TspDTI | ATGAA | 4 cut(s) | 978, 1128, 1476, 1482 |
| TspGWI | ACGGA | 3 cut(s) | 97, 1649, 1881 |
| TspRI | CASTG | 4 cut(s) | 535, 664, 1579, 2308 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 1574, 2374 |
| VneI | GTGCAC | 1 cut(s) | 174 |
| VpaK11BI | GGWCC | 4 cut(s) | 1244, 1320, 2233, 2262 |
| XceI | RCATGY | 1 cut(s) | 1267 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1739 |
| XhoI | CTCGAG | 2 cut(s) | 2045, 2385 |
| XmiI | GTMKAC | 1 cut(s) | 1947 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1965 |
| XspI | CTAG | 6 cut(s) | 677, 713, 722, 780, 2307, 2427 |
| ZrmI | AGTACT | 2 cut(s) | 614, 1818 |
| Zsp2I | ATGCAT | 1 cut(s) | 768 |