Plant mobile domain
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| PMD | PF10536 | 20 - 122 | 3.1e-13 | Plant mobile domain |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 441 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 594 |
| AccII | CGCG | 5 cut(s) | 37, 39, 240, 557, 614 |
| AclWI | GGATC | 3 cut(s) | 338, 507, 520 |
| AcoI | YGGCCR | 4 cut(s) | 115, 190, 408, 609 |
| AfaI | GTAC | 4 cut(s) | 352, 462, 625, 664 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 41, 170, 264, 378, 438, 594 |
| AgeI | ACCGGT | 1 cut(s) | 371 |
| AhlI | ACTAGT | 1 cut(s) | 490 |
| AjnI | CCWGG | 1 cut(s) | 413 |
| AluBI | AGCT | 1 cut(s) | 255 |
| AluI | AGCT | 1 cut(s) | 255 |
| Alw21I | GWGCWC | 2 cut(s) | 247, 294 |
| Alw26I | GTCTC | 2 cut(s) | 211, 481 |
| AlwI | GGATC | 3 cut(s) | 338, 507, 520 |
| AoxI | GGCC | 7 cut(s) | 115, 157, 190, 225, 408, 501, 609 |
| ApeKI | GCWGC | 2 cut(s) | 252, 583 |
| AsiGI | ACCGGT | 1 cut(s) | 371 |
| AspLEI | GCGC | 1 cut(s) | 39 |
| AspS9I | GGNCC | 2 cut(s) | 226, 502 |
| AsuHPI | GGTGA | 3 cut(s) | 45, 139, 205 |
| BaeGI | GKGCMC | 1 cut(s) | 446 |
| BalI | TGGCCA | 2 cut(s) | 117, 192 |
| BamHI | GGATCC | 1 cut(s) | 512 |
| BanI | GGYRCC | 1 cut(s) | 441 |
| BanII | GRGCYC | 2 cut(s) | 180, 425 |
| Bbv12I | GWGCWC | 2 cut(s) | 247, 294 |
| BbvI | GCAGC | 2 cut(s) | 264, 570 |
| BccI | CCATC | 2 cut(s) | 158, 164 |
| BceAI | ACGGC | 4 cut(s) | 172, 265, 423, 516 |
| BciT130I | CCWGG | 1 cut(s) | 415 |
| BcoDI | GTCTC | 2 cut(s) | 211, 481 |
| BcuI | ACTAGT | 1 cut(s) | 490 |
| BfaI | CTAG | 1 cut(s) | 491 |
| BisI | GCNGC | 7 cut(s) | 63, 253, 300, 411, 571, 584, 612 |
| BlsI | GCNGC | 7 cut(s) | 64, 254, 301, 412, 572, 585, 613 |
| BmcAI | AGTACT | 1 cut(s) | 625 |
| Bme1390I | CCNGG | 1 cut(s) | 415 |
| BmgT120I | GGNCC | 2 cut(s) | 226, 502 |
| BmiI | GGNNCC | 2 cut(s) | 443, 514 |
| BmrFI | CCNGG | 1 cut(s) | 415 |
| BmsI | GCATC | 1 cut(s) | 486 |
| BsaJI | CCNNGG | 2 cut(s) | 222, 263 |
| BsaWI | WCCGGW | 1 cut(s) | 371 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 239, 269 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 41, 170, 264, 378, 438, 594 |
| Bse118I | RCCGGY | 2 cut(s) | 371, 579 |
| Bse1I | ACTGG | 1 cut(s) | 464 |
| BseBI | CCWGG | 1 cut(s) | 415 |
| BseDI | CCNNGG | 2 cut(s) | 222, 263 |
| BseGI | GGATG | 2 cut(s) | 477, 563 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 41, 170, 264, 378, 438, 594 |
| BseNI | ACTGG | 1 cut(s) | 464 |
| BseRI | GAGGAG | 1 cut(s) | 623 |
| BseSI | GKGCMC | 1 cut(s) | 446 |
| BseX3I | CGGCCG | 2 cut(s) | 408, 609 |
| BseXI | GCAGC | 2 cut(s) | 264, 570 |
| Bsh1236I | CGCG | 5 cut(s) | 37, 39, 240, 557, 614 |
| Bsh1285I | CGRYCG | 3 cut(s) | 238, 411, 612 |
| BshFI | GGCC | 7 cut(s) | 117, 159, 192, 227, 410, 503, 611 |
| BshNI | GGYRCC | 1 cut(s) | 441 |
| BshTI | ACCGGT | 1 cut(s) | 371 |
| BsiEI | CGRYCG | 3 cut(s) | 238, 411, 612 |
| BsiHKAI | GWGCWC | 2 cut(s) | 247, 294 |
| BsiSI | CCGG | 2 cut(s) | 372, 580 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 41, 170, 264, 378, 438, 594 |
| BsmAI | GTCTC | 2 cut(s) | 211, 481 |
| BsmBI | CGTCTC | 1 cut(s) | 211 |
| BsnI | GGCC | 7 cut(s) | 117, 159, 192, 227, 410, 503, 611 |
| Bsp1286I | GDGCHC | 5 cut(s) | 180, 247, 294, 425, 446 |
| Bsp143I | GATC | 2 cut(s) | 330, 512 |
| Bsp19I | CCATGG | 1 cut(s) | 222 |
| Bsp68I | TCGCGA | 1 cut(s) | 557 |
| BspANI | GGCC | 7 cut(s) | 117, 159, 192, 227, 410, 503, 611 |
| BspFNI | CGCG | 5 cut(s) | 37, 39, 240, 557, 614 |
| BspLI | GGNNCC | 2 cut(s) | 443, 514 |
| BspPI | GGATC | 3 cut(s) | 338, 507, 520 |
| BspT107I | GGYRCC | 1 cut(s) | 441 |
| BsrFI | RCCGGY | 2 cut(s) | 371, 579 |
| BsrI | ACTGG | 1 cut(s) | 464 |
| BssAI | RCCGGY | 2 cut(s) | 371, 579 |
| BssECI | CCNNGG | 2 cut(s) | 222, 263 |
| BssMI | GATC | 2 cut(s) | 330, 512 |
| BssT1I | CCWWGG | 1 cut(s) | 222 |
| Bst2UI | CCWGG | 1 cut(s) | 415 |
| Bst4CI | ACNGT | 2 cut(s) | 236, 267 |
| Bst6I | CTCTTC | 1 cut(s) | 390 |
| BstC8I | GCNNGC | 2 cut(s) | 176, 304 |
| BstDEI | CTNAG | 2 cut(s) | 319, 644 |
| BstDSI | CCRYGG | 2 cut(s) | 222, 263 |
| BstF5I | GGATG | 2 cut(s) | 477, 563 |
| BstFNI | CGCG | 5 cut(s) | 37, 39, 240, 557, 614 |
| BstHHI | GCGC | 1 cut(s) | 39 |
| BstKTI | GATC | 2 cut(s) | 333, 515 |
| BstMAI | GTCTC | 2 cut(s) | 211, 481 |
| BstMBI | GATC | 2 cut(s) | 330, 512 |
| BstMCI | CGRYCG | 3 cut(s) | 238, 411, 612 |
| BstNI | CCWGG | 1 cut(s) | 415 |
| BstSCI | CCNGG | 1 cut(s) | 413 |
| BstSLI | GKGCMC | 1 cut(s) | 446 |
| BstUI | CGCG | 5 cut(s) | 37, 39, 240, 557, 614 |
| BstV1I | GCAGC | 2 cut(s) | 264, 570 |
| BstX2I | RGATCY | 1 cut(s) | 512 |
| BstYI | RGATCY | 1 cut(s) | 512 |
| BstZI | CGGCCG | 2 cut(s) | 408, 609 |
| BsuRI | GGCC | 7 cut(s) | 117, 159, 192, 227, 410, 503, 611 |
| BtgI | CCRYGG | 2 cut(s) | 222, 263 |
| BtgZI | GCGATG | 2 cut(s) | 572, 629 |
| BtsCI | GGATG | 2 cut(s) | 477, 563 |
| BtsIMutI | CAGTG | 1 cut(s) | 471 |
| BtuMI | TCGCGA | 1 cut(s) | 557 |
| Cac8I | GCNNGC | 2 cut(s) | 176, 304 |
| CfoI | GCGC | 1 cut(s) | 39 |
| Cfr10I | RCCGGY | 2 cut(s) | 371, 579 |
| Cfr13I | GGNCC | 2 cut(s) | 226, 502 |
| Csp6I | GTAC | 4 cut(s) | 351, 461, 624, 663 |
| CspAI | ACCGGT | 1 cut(s) | 371 |
| CviAII | CATG | 3 cut(s) | 188, 223, 672 |
| CviQI | GTAC | 4 cut(s) | 351, 461, 624, 663 |
| DdeI | CTNAG | 2 cut(s) | 319, 644 |
| DpnI | GATC | 2 cut(s) | 332, 514 |
| DpnII | GATC | 2 cut(s) | 330, 512 |
| EaeI | YGGCCR | 4 cut(s) | 115, 190, 408, 609 |
| EagI | CGGCCG | 2 cut(s) | 408, 609 |
| Eam1104I | CTCTTC | 1 cut(s) | 390 |
| EarI | CTCTTC | 1 cut(s) | 390 |
| EciI | GGCGGA | 1 cut(s) | 321 |
| EclXI | CGGCCG | 2 cut(s) | 408, 609 |
| Eco130I | CCWWGG | 1 cut(s) | 222 |
| Eco24I | GRGCYC | 2 cut(s) | 180, 425 |
| Eco52I | CGGCCG | 2 cut(s) | 408, 609 |
| EcoRII | CCWGG | 1 cut(s) | 413 |
| EcoT14I | CCWWGG | 1 cut(s) | 222 |
| EcoT22I | ATGCAT | 1 cut(s) | 479 |
| EcoT38I | GRGCYC | 2 cut(s) | 180, 425 |
| ErhI | CCWWGG | 1 cut(s) | 222 |
| Esp3I | CGTCTC | 1 cut(s) | 211 |
| FaeI | CATG | 3 cut(s) | 191, 226, 675 |
| FaiI | YATR | 6 cut(s) | 189, 224, 475, 546, 657, 673 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 329, 361 |
| FatI | CATG | 3 cut(s) | 187, 222, 671 |
| FauI | CCCGC | 2 cut(s) | 278, 575 |
| Fnu4HI | GCNGC | 7 cut(s) | 63, 253, 300, 411, 571, 584, 612 |
| FokI | GGATG | 2 cut(s) | 464, 550 |
| FriOI | GRGCYC | 2 cut(s) | 180, 425 |
| Fsp4HI | GCNGC | 7 cut(s) | 63, 253, 300, 411, 571, 584, 612 |
| FspBI | CTAG | 1 cut(s) | 491 |
| GlaI | GCGC | 1 cut(s) | 38 |
| GluI | GCNGC | 7 cut(s) | 63, 253, 300, 411, 571, 584, 612 |
| HaeIII | GGCC | 7 cut(s) | 117, 159, 192, 227, 410, 503, 611 |
| HapII | CCGG | 2 cut(s) | 372, 580 |
| HhaI | GCGC | 1 cut(s) | 39 |
| Hin1II | CATG | 3 cut(s) | 191, 226, 675 |
| Hin6I | GCGC | 1 cut(s) | 37 |
| HinP1I | GCGC | 1 cut(s) | 37 |
| HinfI | GANTC | 3 cut(s) | 200, 382, 528 |
| HpaII | CCGG | 2 cut(s) | 372, 580 |
| HphI | GGTGA | 3 cut(s) | 45, 139, 205 |
| Hpy166II | GTNNAC | 1 cut(s) | 53 |
| Hpy188III | TCNNGA | 2 cut(s) | 486, 556 |
| Hpy8I | GTNNAC | 1 cut(s) | 53 |
| Hpy99I | CGWCG | 1 cut(s) | 557 |
| HpyCH4III | ACNGT | 2 cut(s) | 236, 267 |
| HpyCH4V | TGCA | 1 cut(s) | 477 |
| HpyF3I | CTNAG | 2 cut(s) | 319, 644 |
| Hsp92II | CATG | 3 cut(s) | 191, 226, 675 |
| HspAI | GCGC | 1 cut(s) | 37 |
| Kzo9I | GATC | 2 cut(s) | 330, 512 |
| LmnI | GCTCC | 2 cut(s) | 260, 289 |
| LpnPI | CCDG | 6 cut(s) | 288, 385, 400, 427, 477, 593 |
| Lsp1109I | GCAGC | 2 cut(s) | 264, 570 |
| LweI | GCATC | 1 cut(s) | 486 |
| MaeI | CTAG | 1 cut(s) | 491 |
| MalI | GATC | 2 cut(s) | 332, 514 |
| MboI | GATC | 2 cut(s) | 330, 512 |
| MboII | GAAGA | 2 cut(s) | 23, 377 |
| MflI | RGATCY | 1 cut(s) | 512 |
| MhlI | GDGCHC | 5 cut(s) | 180, 247, 294, 425, 446 |
| MlsI | TGGCCA | 2 cut(s) | 117, 192 |
| MluCI | AATT | 2 cut(s) | 194, 309 |
| MluNI | TGGCCA | 2 cut(s) | 117, 192 |
| MlyI | GAGTC | 2 cut(s) | 194, 376 |
| MmeI | TCCRAC | 1 cut(s) | 556 |
| MnlI | CCTC | 4 cut(s) | 226, 367, 456, 644 |
| Mox20I | TGGCCA | 2 cut(s) | 117, 192 |
| Mph1103I | ATGCAT | 1 cut(s) | 479 |
| MscI | TGGCCA | 2 cut(s) | 117, 192 |
| Msp20I | TGGCCA | 2 cut(s) | 117, 192 |
| MspI | CCGG | 2 cut(s) | 372, 580 |
| MspR9I | CCNGG | 1 cut(s) | 415 |
| MvaI | CCWGG | 1 cut(s) | 415 |
| MvnI | CGCG | 5 cut(s) | 37, 39, 240, 557, 614 |
| NcoI | CCATGG | 1 cut(s) | 222 |
| NdeII | GATC | 2 cut(s) | 330, 512 |
| NlaIII | CATG | 3 cut(s) | 191, 226, 675 |
| NlaIV | GGNNCC | 2 cut(s) | 443, 514 |
| NmeAIII | GCCGAG | 2 cut(s) | 404, 587 |
| NruI | TCGCGA | 1 cut(s) | 557 |
| NsiI | ATGCAT | 1 cut(s) | 479 |
| PfeI | GAWTC | 1 cut(s) | 528 |
| PflFI | GACNNNGTC | 1 cut(s) | 203 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 594 |
| PinAI | ACCGGT | 1 cut(s) | 371 |
| PkrI | GCNGC | 7 cut(s) | 64, 254, 301, 412, 572, 585, 613 |
| PleI | GAGTC | 2 cut(s) | 194, 376 |
| PpsI | GAGTC | 2 cut(s) | 194, 376 |
| Psp6I | CCWGG | 1 cut(s) | 413 |
| PspGI | CCWGG | 1 cut(s) | 413 |
| PspN4I | GGNNCC | 2 cut(s) | 443, 514 |
| PspPI | GGNCC | 2 cut(s) | 226, 502 |
| PsuI | RGATCY | 1 cut(s) | 512 |
| PsyI | GACNNNGTC | 1 cut(s) | 203 |
| RruI | TCGCGA | 1 cut(s) | 557 |
| RsaI | GTAC | 4 cut(s) | 352, 462, 625, 664 |
| RsaNI | GTAC | 4 cut(s) | 351, 461, 624, 663 |
| SatI | GCNGC | 7 cut(s) | 63, 253, 300, 411, 571, 584, 612 |
| Sau3AI | GATC | 2 cut(s) | 330, 512 |
| Sau96I | GGNCC | 2 cut(s) | 226, 502 |
| ScaI | AGTACT | 1 cut(s) | 625 |
| SchI | GAGTC | 2 cut(s) | 194, 376 |
| ScrFI | CCNGG | 1 cut(s) | 415 |
| SduI | GDGCHC | 5 cut(s) | 180, 247, 294, 425, 446 |
| SetI | ASST | 4 cut(s) | 101, 218, 257, 668 |
| SfaNI | GCATC | 1 cut(s) | 486 |
| SgrAI | CRCCGGYG | 1 cut(s) | 371 |
| SpeI | ACTAGT | 1 cut(s) | 490 |
| Sse9I | AATT | 2 cut(s) | 194, 309 |
| SspMI | CTAG | 1 cut(s) | 491 |
| StyD4I | CCNGG | 1 cut(s) | 413 |
| StyI | CCWWGG | 1 cut(s) | 222 |
| TaaI | ACNGT | 2 cut(s) | 236, 267 |
| TaqI | TCGA | 3 cut(s) | 109, 198, 485 |
| TasI | AATT | 2 cut(s) | 194, 309 |
| TatI | WGTACW | 2 cut(s) | 350, 623 |
| TauI | GCSGC | 5 cut(s) | 65, 302, 413, 573, 614 |
| TfiI | GAWTC | 1 cut(s) | 528 |
| TscAI | CASTG | 1 cut(s) | 471 |
| TseI | GCWGC | 2 cut(s) | 252, 583 |
| TspDTI | ATGAA | 4 cut(s) | 17, 176, 331, 632 |
| TspGWI | ACGGA | 3 cut(s) | 193, 541, 650 |
| TspRI | CASTG | 1 cut(s) | 471 |
| Tth111I | GACNNNGTC | 1 cut(s) | 203 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 594 |
| XspI | CTAG | 1 cut(s) | 491 |
| ZrmI | AGTACT | 1 cut(s) | 625 |
| Zsp2I | ATGCAT | 1 cut(s) | 479 |