Plant mobile domain
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| PMD | PF10536 | 140 - 287 | 1.9e-16 | Plant mobile domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 2 cut(s) | 1630, 2263 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 910 |
| Acc36I | ACCTGC | 2 cut(s) | 1630, 2263 |
| Acc65I | GGTACC | 1 cut(s) | 3133 |
| AccB1I | GGYRCC | 4 cut(s) | 987, 1598, 2379, 3133 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 2665, 2846 |
| AccBSI | CCGCTC | 4 cut(s) | 270, 1458, 1664, 1689 |
| AccI | GTMKAC | 2 cut(s) | 62, 208 |
| AclWI | GGATC | 8 cut(s) | 20, 800, 1159, 1172, 1323, 1535, 1541, 2255 |
| AcoI | YGGCCR | 3 cut(s) | 664, 771, 3009 |
| AcsI | RAATTY | 1 cut(s) | 719 |
| AcuI | CTGAAG | 4 cut(s) | 1017, 1070, 2697, 3187 |
| AcyI | GRCGYC | 1 cut(s) | 1044 |
| AfaI | GTAC | 5 cut(s) | 332, 819, 941, 1199, 3135 |
| AflIII | ACRYGT | 1 cut(s) | 2904 |
| AgeI | ACCGGT | 1 cut(s) | 2038 |
| AjnI | CCWGG | 6 cut(s) | 251, 565, 1205, 2610, 2763, 2821 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1040, 1072 |
| AloI | GAACNNNNNNTCC | 4 cut(s) | 2085, 2117, 2891, 2923 |
| Alw21I | GWGCWC | 5 cut(s) | 56, 433, 742, 1764, 2473 |
| Alw26I | GTCTC | 2 cut(s) | 1599, 2705 |
| AlwI | GGATC | 8 cut(s) | 20, 800, 1159, 1172, 1323, 1535, 1541, 2255 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 3210 |
| Ama87I | CYCGRG | 4 cut(s) | 1277, 2283, 2670, 3178 |
| ApaI | GGGCCC | 2 cut(s) | 616, 2242 |
| ApoI | RAATTY | 1 cut(s) | 719 |
| AscI | GGCGCGCC | 1 cut(s) | 2347 |
| AsiGI | ACCGGT | 1 cut(s) | 2038 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 1253, 2330, 2796 |
| Asp718I | GGTACC | 1 cut(s) | 3133 |
| AsuHPI | GGTGA | 7 cut(s) | 301, 517, 523, 1201, 1228, 1611, 2416 |
| AvaI | CYCGRG | 4 cut(s) | 1277, 2283, 2670, 3178 |
| AvaII | GGWCC | 7 cut(s) | 146, 319, 762, 837, 2119, 2315, 3213 |
| AxyI | CCTNAGG | 1 cut(s) | 1593 |
| BaeGI | GKGCMC | 2 cut(s) | 616, 2242 |
| BamHI | GGATCC | 1 cut(s) | 1164 |
| BanI | GGYRCC | 4 cut(s) | 987, 1598, 2379, 3133 |
| BanII | GRGCYC | 7 cut(s) | 56, 616, 2052, 2242, 2271, 3056, 3186 |
| BauI | CACGAG | 1 cut(s) | 3233 |
| BbsI | GAAGAC | 2 cut(s) | 1048, 1594 |
| Bbv12I | GWGCWC | 5 cut(s) | 56, 433, 742, 1764, 2473 |
| BccI | CCATC | 7 cut(s) | 536, 876, 941, 970, 1790, 2017, 2512 |
| BceAI | ACGGC | 3 cut(s) | 60, 63, 1871 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 374, 408, 1103, 1137 |
| BciT130I | CCWGG | 6 cut(s) | 253, 567, 1207, 2612, 2765, 2823 |
| BcoDI | GTCTC | 2 cut(s) | 1599, 2705 |
| BfaI | CTAG | 6 cut(s) | 806, 1482, 1736, 1916, 2279, 2405 |
| BfmI | CTRYAG | 4 cut(s) | 750, 1244, 2441, 3339 |
| BfoI | RGCGCY | 2 cut(s) | 1711, 3260 |
| BfuAI | ACCTGC | 2 cut(s) | 1630, 2263 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 2615 |
| BglII | AGATCT | 2 cut(s) | 1969, 3343 |
| BlpI | GCTNAGC | 1 cut(s) | 2640 |
| Bme18I | GGWCC | 7 cut(s) | 146, 319, 762, 837, 2119, 2315, 3213 |
| BmeT110I | CYCGRG | 4 cut(s) | 1277, 2283, 2670, 3178 |
| BmrI | ACTGGG | 2 cut(s) | 830, 1304 |
| BmsI | GCATC | 9 cut(s) | 387, 587, 1076, 1354, 1423, 2551, 2573, 3198, 3270 |
| BmuI | ACTGGG | 2 cut(s) | 830, 1304 |
| BpiI | GAAGAC | 2 cut(s) | 1048, 1594 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1931, 1963 |
| BpmI | CTGGAG | 4 cut(s) | 329, 1228, 1920, 2633 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 2640 |
| BpuEI | CTTGAG | 5 cut(s) | 84, 722, 1944, 2066, 2634 |
| Bsa29I | ATCGAT | 1 cut(s) | 581 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1968 |
| BsaHI | GRCGYC | 1 cut(s) | 1044 |
| BsaI | GGTCTC | 1 cut(s) | 2705 |
| BsaWI | WCCGGW | 3 cut(s) | 834, 900, 2038 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 233, 263, 1936, 1966, 2903, 2933 |
| Bse118I | RCCGGY | 6 cut(s) | 65, 374, 984, 2038, 3150, 3220 |
| Bse1I | ACTGG | 5 cut(s) | 825, 1299, 1499, 1930, 3025 |
| Bse21I | CCTNAGG | 1 cut(s) | 1593 |
| Bse3DI | GCAATG | 2 cut(s) | 390, 435 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1968 |
| BseBI | CCWGG | 6 cut(s) | 253, 567, 1207, 2612, 2765, 2823 |
| BseCI | ATCGAT | 1 cut(s) | 581 |
| BseGI | GGATG | 9 cut(s) | 519, 933, 1067, 1105, 1425, 1747, 1782, 3189, 3285 |
| BseJI | GATNNNNATC | 1 cut(s) | 1968 |
| BseMI | GCAATG | 2 cut(s) | 390, 435 |
| BseMII | CTCAG | 8 cut(s) | 1548, 1584, 2085, 2106, 2486, 2633, 2654, 3110 |
| BseNI | ACTGG | 5 cut(s) | 825, 1299, 1499, 1930, 3025 |
| BsePI | GCGCGC | 2 cut(s) | 825, 2347 |
| BseRI | GAGGAG | 2 cut(s) | 87, 405 |
| BseSI | GKGCMC | 2 cut(s) | 616, 2242 |
| BseYI | CCCAGC | 5 cut(s) | 302, 1437, 1677, 1834, 2387 |
| BsgI | GTGCAG | 2 cut(s) | 827, 2717 |
| Bsh1285I | CGRYCG | 4 cut(s) | 62, 66, 1231, 1447 |
| BshNI | GGYRCC | 4 cut(s) | 987, 1598, 2379, 3133 |
| BshTI | ACCGGT | 1 cut(s) | 2038 |
| BshVI | ATCGAT | 1 cut(s) | 581 |
| BsiEI | CGRYCG | 4 cut(s) | 62, 66, 1231, 1447 |
| BsiHKAI | GWGCWC | 5 cut(s) | 56, 433, 742, 1764, 2473 |
| BsiHKCI | CYCGRG | 4 cut(s) | 1277, 2283, 2670, 3178 |
| BslFI | GGGAC | 5 cut(s) | 838, 1817, 2087, 2105, 2301 |
| BsmAI | GTCTC | 2 cut(s) | 1599, 2705 |
| BsmFI | GGGAC | 5 cut(s) | 838, 1817, 2087, 2105, 2301 |
| Bso31I | GGTCTC | 1 cut(s) | 2705 |
| BsoBI | CYCGRG | 4 cut(s) | 1277, 2283, 2670, 3178 |
| Bsp120I | GGGCCC | 2 cut(s) | 612, 2238 |
| Bsp1407I | TGTACA | 1 cut(s) | 939 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 2640 |
| Bsp19I | CCATGG | 1 cut(s) | 3048 |
| BspCNI | CTCAG | 8 cut(s) | 1549, 1585, 2084, 2107, 2485, 2632, 2653, 3109 |
| BspDI | ATCGAT | 1 cut(s) | 581 |
| BspHI | TCATGA | 1 cut(s) | 1059 |
| BspMAI | CTGCAG | 2 cut(s) | 2445, 3343 |
| BspMI | ACCTGC | 2 cut(s) | 1630, 2263 |
| BspPI | GGATC | 8 cut(s) | 20, 800, 1159, 1172, 1323, 1535, 1541, 2255 |
| BspQI | GCTCTTC | 2 cut(s) | 1722, 3206 |
| BspT107I | GGYRCC | 4 cut(s) | 987, 1598, 2379, 3133 |
| BspTNI | GGTCTC | 1 cut(s) | 2705 |
| BsrBI | CCGCTC | 4 cut(s) | 270, 1458, 1664, 1689 |
| BsrDI | GCAATG | 2 cut(s) | 390, 435 |
| BsrFI | RCCGGY | 6 cut(s) | 65, 374, 984, 2038, 3150, 3220 |
| BsrGI | TGTACA | 1 cut(s) | 939 |
| BsrI | ACTGG | 5 cut(s) | 825, 1299, 1499, 1930, 3025 |
| BssAI | RCCGGY | 6 cut(s) | 65, 374, 984, 2038, 3150, 3220 |
| BssHII | GCGCGC | 2 cut(s) | 825, 2347 |
| BssNI | GRCGYC | 1 cut(s) | 1044 |
| BssSI | CACGAG | 1 cut(s) | 3233 |
| BssT1I | CCWWGG | 3 cut(s) | 1767, 2311, 3048 |
| Bst2BI | CACGAG | 1 cut(s) | 3233 |
| Bst2UI | CCWGG | 6 cut(s) | 253, 567, 1207, 2612, 2765, 2823 |
| Bst4CI | ACNGT | 6 cut(s) | 464, 1054, 1448, 1655, 2101, 2587 |
| Bst6I | CTCTTC | 7 cut(s) | 1184, 1446, 1722, 2673, 2703, 2772, 3206 |
| BstACI | GRCGYC | 1 cut(s) | 1044 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 437 |
| BstAUI | TGTACA | 1 cut(s) | 939 |
| BstDSI | CCRYGG | 5 cut(s) | 312, 444, 1638, 2703, 3048 |
| BstEII | GGTNACC | 1 cut(s) | 1234 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 99, 1207 |
| BstF5I | GGATG | 9 cut(s) | 519, 933, 1067, 1105, 1425, 1747, 1782, 3189, 3285 |
| BstH2I | RGCGCY | 2 cut(s) | 1711, 3260 |
| BstMAI | GTCTC | 2 cut(s) | 1599, 2705 |
| BstMCI | CGRYCG | 4 cut(s) | 62, 66, 1231, 1447 |
| BstNI | CCWGG | 6 cut(s) | 253, 567, 1207, 2612, 2765, 2823 |
| BstNSI | RCATGY | 1 cut(s) | 850 |
| BstPI | GGTNACC | 1 cut(s) | 1234 |
| BstSFI | CTRYAG | 4 cut(s) | 750, 1244, 2441, 3339 |
| BstSLI | GKGCMC | 2 cut(s) | 616, 2242 |
| BstV2I | GAAGAC | 2 cut(s) | 1048, 1594 |
| BstX2I | RGATCY | 3 cut(s) | 1164, 1969, 3343 |
| BstYI | RGATCY | 3 cut(s) | 1164, 1969, 3343 |
| Bsu15I | ATCGAT | 1 cut(s) | 581 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1593 |
| BsuTUI | ATCGAT | 1 cut(s) | 581 |
| BtgI | CCRYGG | 5 cut(s) | 312, 444, 1638, 2703, 3048 |
| BtsCI | GGATG | 9 cut(s) | 519, 933, 1067, 1105, 1425, 1747, 1782, 3189, 3285 |
| BtsI | GCAGTG | 1 cut(s) | 742 |
| BtsIMutI | CAGTG | 4 cut(s) | 469, 742, 1292, 2583 |
| BveI | ACCTGC | 2 cut(s) | 1630, 2263 |
| CaiI | CAGNNNCTG | 1 cut(s) | 3210 |
| CciI | TCATGA | 1 cut(s) | 1059 |
| Cfr10I | RCCGGY | 6 cut(s) | 65, 374, 984, 2038, 3150, 3220 |
| Cfr42I | CCGCGG | 4 cut(s) | 315, 447, 1641, 2706 |
| Cfr9I | CCCGGG | 1 cut(s) | 2283 |
| ClaI | ATCGAT | 1 cut(s) | 581 |
| CpoI | CGGWCCG | 1 cut(s) | 146 |
| CseI | GACGC | 6 cut(s) | 194, 295, 1052, 1411, 2438, 2895 |
| Csp6I | GTAC | 5 cut(s) | 331, 818, 940, 1198, 3134 |
| CspAI | ACCGGT | 1 cut(s) | 2038 |
| CspI | CGGWCCG | 1 cut(s) | 146 |
| CviQI | GTAC | 5 cut(s) | 331, 818, 940, 1198, 3134 |
| DraI | TTTAAA | 2 cut(s) | 1464, 3271 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 910 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 910 |
| EaeI | YGGCCR | 3 cut(s) | 664, 771, 3009 |
| Eam1104I | CTCTTC | 7 cut(s) | 1184, 1446, 1722, 2673, 2703, 2772, 3206 |
| EarI | CTCTTC | 7 cut(s) | 1184, 1446, 1722, 2673, 2703, 2772, 3206 |
| EciI | GGCGGA | 3 cut(s) | 160, 2486, 2977 |
| Ecl136II | GAGCTC | 1 cut(s) | 54 |
| Eco130I | CCWWGG | 3 cut(s) | 1767, 2311, 3048 |
| Eco147I | AGGCCT | 2 cut(s) | 1486, 2796 |
| Eco24I | GRGCYC | 7 cut(s) | 56, 616, 2052, 2242, 2271, 3056, 3186 |
| Eco31I | GGTCTC | 1 cut(s) | 2705 |
| Eco32I | GATATC | 1 cut(s) | 1751 |
| Eco47I | GGWCC | 7 cut(s) | 146, 319, 762, 837, 2119, 2315, 3213 |
| Eco53kI | GAGCTC | 1 cut(s) | 54 |
| Eco57I | CTGAAG | 4 cut(s) | 1017, 1070, 2697, 3187 |
| Eco81I | CCTNAGG | 1 cut(s) | 1593 |
| Eco88I | CYCGRG | 4 cut(s) | 1277, 2283, 2670, 3178 |
| Eco91I | GGTNACC | 1 cut(s) | 1234 |
| EcoICRI | GAGCTC | 1 cut(s) | 54 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 99, 1207 |
| EcoO109I | RGGNCCY | 4 cut(s) | 612, 2119, 2315, 2608 |
| EcoO65I | GGTNACC | 1 cut(s) | 1234 |
| EcoRII | CCWGG | 6 cut(s) | 251, 565, 1205, 2610, 2763, 2821 |
| EcoRV | GATATC | 1 cut(s) | 1751 |
| EcoT14I | CCWWGG | 3 cut(s) | 1767, 2311, 3048 |
| EcoT22I | ATGCAT | 1 cut(s) | 2566 |
| EcoT38I | GRGCYC | 7 cut(s) | 56, 616, 2052, 2242, 2271, 3056, 3186 |
| ErhI | CCWWGG | 3 cut(s) | 1767, 2311, 3048 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 1040, 1072, 2628, 2660, 2990, 3022 |
| FaqI | GGGAC | 5 cut(s) | 838, 1817, 2087, 2105, 2301 |
| FauNDI | CATATG | 1 cut(s) | 559 |
| FblI | GTMKAC | 2 cut(s) | 62, 208 |
| FokI | GGATG | 9 cut(s) | 506, 920, 1054, 1112, 1412, 1754, 1769, 3176, 3292 |
| FriOI | GRGCYC | 7 cut(s) | 56, 616, 2052, 2242, 2271, 3056, 3186 |
| FspBI | CTAG | 6 cut(s) | 806, 1482, 1736, 1916, 2279, 2405 |
| GsaI | CCCAGC | 5 cut(s) | 306, 1441, 1681, 1838, 2391 |
| GsuI | CTGGAG | 4 cut(s) | 329, 1228, 1920, 2633 |
| HaeII | RGCGCY | 2 cut(s) | 1711, 3260 |
| HgaI | GACGC | 6 cut(s) | 194, 295, 1052, 1411, 2438, 2895 |
| Hin1I | GRCGYC | 1 cut(s) | 1044 |
| HincII | GTYRAC | 3 cut(s) | 63, 209, 1303 |
| HindII | GTYRAC | 3 cut(s) | 63, 209, 1303 |
| HindIII | AAGCTT | 1 cut(s) | 2721 |
| HphI | GGTGA | 7 cut(s) | 301, 517, 523, 1201, 1228, 1611, 2416 |
| Hpy166II | GTNNAC | 6 cut(s) | 63, 209, 591, 1192, 1200, 1303 |
| Hpy8I | GTNNAC | 6 cut(s) | 63, 209, 591, 1192, 1200, 1303 |
| Hpy99I | CGWCG | 9 cut(s) | 210, 231, 1012, 1518, 1525, 1673, 1856, 2432, 2753 |
| HpyCH4III | ACNGT | 6 cut(s) | 464, 1054, 1448, 1655, 2101, 2587 |
| HpyCH4IV | ACGT | 4 cut(s) | 226, 2328, 2547, 3168 |
| HpySE526I | ACGT | 4 cut(s) | 226, 2328, 2547, 3168 |
| Hsp92I | GRCGYC | 1 cut(s) | 1044 |
| KpnI | GGTACC | 1 cut(s) | 3137 |
| KspI | CCGCGG | 4 cut(s) | 315, 447, 1641, 2706 |
| LguI | GCTCTTC | 2 cut(s) | 1722, 3206 |
| LmnI | GCTCC | 9 cut(s) | 275, 1497, 1669, 1811, 1957, 2391, 2629, 2938, 3189 |
| LweI | GCATC | 9 cut(s) | 387, 587, 1076, 1354, 1423, 2551, 2573, 3198, 3270 |
| MaeI | CTAG | 6 cut(s) | 806, 1482, 1736, 1916, 2279, 2405 |
| MaeII | ACGT | 4 cut(s) | 226, 2328, 2547, 3168 |
| MaeIII | GTNAC | 4 cut(s) | 307, 1234, 1672, 1870 |
| MbiI | CCGCTC | 4 cut(s) | 270, 1458, 1664, 1689 |
| MflI | RGATCY | 3 cut(s) | 1164, 1969, 3343 |
| MluCI | AATT | 1 cut(s) | 719 |
| MluI | ACGCGT | 1 cut(s) | 2904 |
| MlyI | GAGTC | 9 cut(s) | 145, 898, 1031, 1232, 1421, 1568, 1927, 2063, 2723 |
| MmeI | TCCRAC | 8 cut(s) | 173, 1251, 1362, 1810, 1834, 1928, 2397, 2934 |
| Mph1103I | ATGCAT | 1 cut(s) | 2566 |
| MroXI | GAANNNNTTC | 3 cut(s) | 1253, 2330, 2796 |
| MseI | TTAA | 5 cut(s) | 36, 1463, 2810, 3029, 3270 |
| MslI | CAYNNNNRTG | 1 cut(s) | 971 |
| MspA1I | CMGCKG | 6 cut(s) | 176, 314, 446, 1640, 2075, 2705 |
| MvaI | CCWGG | 6 cut(s) | 253, 567, 1207, 2612, 2765, 2823 |
| NcoI | CCATGG | 1 cut(s) | 3048 |
| NdeI | CATATG | 1 cut(s) | 559 |
| NmeAIII | GCCGAG | 7 cut(s) | 799, 1120, 1928, 2477, 2560, 2575, 2711 |
| NmuCI | GTSAC | 2 cut(s) | 307, 1234 |
| NsiI | ATGCAT | 1 cut(s) | 2566 |
| NspI | RCATGY | 1 cut(s) | 850 |
| PaeR7I | CTCGAG | 1 cut(s) | 1277 |
| PagI | TCATGA | 1 cut(s) | 1059 |
| PalAI | GGCGCGCC | 1 cut(s) | 2347 |
| PaqCI | CACCTGC | 2 cut(s) | 1630, 2263 |
| PauI | GCGCGC | 2 cut(s) | 825, 2347 |
| PceI | AGGCCT | 2 cut(s) | 1486, 2796 |
| PciSI | GCTCTTC | 2 cut(s) | 1722, 3206 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1050 |
| PdmI | GAANNNNTTC | 3 cut(s) | 1253, 2330, 2796 |
| PfeI | GAWTC | 4 cut(s) | 544, 1031, 2374, 3079 |
| PflFI | GACNNNGTC | 4 cut(s) | 1232, 1421, 1477, 2432 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 2665, 2846 |
| PfoI | TCCNGGA | 1 cut(s) | 1205 |
| PinAI | ACCGGT | 1 cut(s) | 2038 |
| PleI | GAGTC | 9 cut(s) | 145, 898, 1031, 1231, 1420, 1567, 1927, 2063, 2723 |
| PpsI | GAGTC | 9 cut(s) | 145, 898, 1031, 1231, 1420, 1567, 1927, 2063, 2723 |
| PpuMI | RGGWCCY | 2 cut(s) | 2119, 2315 |
| Psp124BI | GAGCTC | 1 cut(s) | 56 |
| Psp5II | RGGWCCY | 2 cut(s) | 2119, 2315 |
| Psp6I | CCWGG | 6 cut(s) | 251, 565, 1205, 2610, 2763, 2821 |
| PspEI | GGTNACC | 1 cut(s) | 1234 |
| PspFI | CCCAGC | 5 cut(s) | 302, 1437, 1677, 1834, 2387 |
| PspGI | CCWGG | 6 cut(s) | 251, 565, 1205, 2610, 2763, 2821 |
| PspOMI | GGGCCC | 2 cut(s) | 612, 2238 |
| PspPPI | RGGWCCY | 2 cut(s) | 2119, 2315 |
| PstI | CTGCAG | 2 cut(s) | 2445, 3343 |
| PstNI | CAGNNNCTG | 1 cut(s) | 3210 |
| PsuI | RGATCY | 3 cut(s) | 1164, 1969, 3343 |
| PsyI | GACNNNGTC | 4 cut(s) | 1232, 1421, 1477, 2432 |
| PteI | GCGCGC | 2 cut(s) | 825, 2347 |
| RsaI | GTAC | 5 cut(s) | 332, 819, 941, 1199, 3135 |
| RsaNI | GTAC | 5 cut(s) | 331, 818, 940, 1198, 3134 |
| RseI | CAYNNNNRTG | 1 cut(s) | 971 |
| Rsr2I | CGGWCCG | 1 cut(s) | 146 |
| RsrII | CGGWCCG | 1 cut(s) | 146 |
| SacI | GAGCTC | 1 cut(s) | 56 |
| SacII | CCGCGG | 4 cut(s) | 315, 447, 1641, 2706 |
| SalI | GTCGAC | 2 cut(s) | 61, 207 |
| SapI | GCTCTTC | 2 cut(s) | 1722, 3206 |
| SaqAI | TTAA | 5 cut(s) | 36, 1463, 2810, 3029, 3270 |
| SchI | GAGTC | 9 cut(s) | 145, 898, 1031, 1232, 1421, 1568, 1927, 2063, 2723 |
| SfaNI | GCATC | 9 cut(s) | 387, 587, 1076, 1354, 1423, 2551, 2573, 3198, 3270 |
| SfcI | CTRYAG | 4 cut(s) | 750, 1244, 2441, 3339 |
| Sfr274I | CTCGAG | 1 cut(s) | 1277 |
| Sfr303I | CCGCGG | 4 cut(s) | 315, 447, 1641, 2706 |
| SgrAI | CRCCGGYG | 1 cut(s) | 984 |
| SgrBI | CCGCGG | 4 cut(s) | 315, 447, 1641, 2706 |
| SgsI | GGCGCGCC | 1 cut(s) | 2347 |
| SinI | GGWCC | 7 cut(s) | 146, 319, 762, 837, 2119, 2315, 3213 |
| SlaI | CTCGAG | 1 cut(s) | 1277 |
| SmaI | CCCGGG | 1 cut(s) | 2285 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 971 |
| SmlI | CTYRAG | 6 cut(s) | 99, 701, 1277, 1959, 2045, 2649 |
| SmoI | CTYRAG | 6 cut(s) | 99, 701, 1277, 1959, 2045, 2649 |
| SrfI | GCCCGGGC | 1 cut(s) | 2285 |
| Sse9I | AATT | 1 cut(s) | 719 |
| SseBI | AGGCCT | 2 cut(s) | 1486, 2796 |
| SspMI | CTAG | 6 cut(s) | 806, 1482, 1736, 1916, 2279, 2405 |
| SstI | GAGCTC | 1 cut(s) | 56 |
| StuI | AGGCCT | 2 cut(s) | 1486, 2796 |
| StyI | CCWWGG | 3 cut(s) | 1767, 2311, 3048 |
| TaaI | ACNGT | 6 cut(s) | 464, 1054, 1448, 1655, 2101, 2587 |
| TaiI | ACGT | 4 cut(s) | 229, 2331, 2550, 3171 |
| TaqII | GACCGA | 3 cut(s) | 48, 134, 2100 |
| TasI | AATT | 1 cut(s) | 719 |
| TatI | WGTACW | 2 cut(s) | 939, 1197 |
| TfiI | GAWTC | 4 cut(s) | 544, 1031, 2374, 3079 |
| Tru1I | TTAA | 5 cut(s) | 36, 1463, 2810, 3029, 3270 |
| Tru9I | TTAA | 5 cut(s) | 36, 1463, 2810, 3029, 3270 |
| TscAI | CASTG | 4 cut(s) | 469, 742, 1299, 2590 |
| TseFI | GTSAC | 2 cut(s) | 307, 1234 |
| Tsp45I | GTSAC | 2 cut(s) | 307, 1234 |
| TspDTI | ATGAA | 9 cut(s) | 248, 536, 712, 1048, 1116, 1758, 1980, 2339, 2379 |
| TspGWI | ACGGA | 1 cut(s) | 190 |
| TspMI | CCCGGG | 1 cut(s) | 2283 |
| TspRI | CASTG | 4 cut(s) | 469, 742, 1299, 2590 |
| Tth111I | GACNNNGTC | 4 cut(s) | 1232, 1421, 1477, 2432 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 2665, 2846 |
| VpaK11BI | GGWCC | 7 cut(s) | 146, 319, 762, 837, 2119, 2315, 3213 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 99, 1207 |
| XapI | RAATTY | 1 cut(s) | 719 |
| XbaI | TCTAGA | 1 cut(s) | 2404 |
| XceI | RCATGY | 1 cut(s) | 850 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 875, 973 |
| XhoI | CTCGAG | 1 cut(s) | 1277 |
| XmaI | CCCGGG | 1 cut(s) | 2283 |
| XmiI | GTMKAC | 2 cut(s) | 62, 208 |
| XmnI | GAANNNNTTC | 3 cut(s) | 1253, 2330, 2796 |
| XspI | CTAG | 6 cut(s) | 806, 1482, 1736, 1916, 2279, 2405 |
| Zsp2I | ATGCAT | 1 cut(s) | 2566 |