No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 1 cut(s) | 184 |
| AccB1I | GGYRCC | 1 cut(s) | 184 |
| AccII | CGCG | 2 cut(s) | 119, 165 |
| AciI | CCGC | 5 cut(s) | 163, 300, 459, 575, 581 |
| AcuI | CTGAAG | 1 cut(s) | 531 |
| AcyI | GRCGYC | 1 cut(s) | 639 |
| AfaI | GTAC | 2 cut(s) | 186, 280 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 41, 259, 260, 283, 721 |
| AflIII | ACRYGT | 2 cut(s) | 117, 145 |
| AhlI | ACTAGT | 1 cut(s) | 226 |
| AjiI | CACGTC | 1 cut(s) | 148 |
| AjnI | CCWGG | 6 cut(s) | 19, 34, 396, 426, 448, 654 |
| AluBI | AGCT | 6 cut(s) | 55, 140, 233, 515, 593, 691 |
| AluI | AGCT | 6 cut(s) | 55, 140, 233, 515, 593, 691 |
| Alw21I | GWGCWC | 3 cut(s) | 66, 171, 214 |
| Alw26I | GTCTC | 1 cut(s) | 363 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 338 |
| AoxI | GGCC | 2 cut(s) | 74, 430 |
| ApaI | GGGCCC | 1 cut(s) | 434 |
| ApeKI | GCWGC | 1 cut(s) | 578 |
| AseI | ATTAAT | 1 cut(s) | 369 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 312, 414 |
| Asp718I | GGTACC | 1 cut(s) | 184 |
| AspLEI | GCGC | 2 cut(s) | 393, 455 |
| AspS9I | GGNCC | 4 cut(s) | 39, 74, 430, 431 |
| AsuHPI | GGTGA | 1 cut(s) | 671 |
| AvaII | GGWCC | 1 cut(s) | 39 |
| BaeGI | GKGCMC | 1 cut(s) | 434 |
| BanI | GGYRCC | 1 cut(s) | 184 |
| BanII | GRGCYC | 3 cut(s) | 272, 434, 469 |
| BauI | CACGAG | 3 cut(s) | 207, 353, 588 |
| BbsI | GAAGAC | 1 cut(s) | 407 |
| Bbv12I | GWGCWC | 3 cut(s) | 66, 171, 214 |
| BbvI | GCAGC | 1 cut(s) | 565 |
| BccI | CCATC | 1 cut(s) | 628 |
| BceAI | ACGGC | 1 cut(s) | 71 |
| BciT130I | CCWGG | 6 cut(s) | 21, 36, 398, 428, 450, 656 |
| BcoDI | GTCTC | 1 cut(s) | 363 |
| BcuI | ACTAGT | 1 cut(s) | 226 |
| BfaI | CTAG | 4 cut(s) | 104, 227, 405, 594 |
| BfoI | RGCGCY | 1 cut(s) | 394 |
| BglII | AGATCT | 1 cut(s) | 547 |
| BisI | GCNGC | 2 cut(s) | 576, 579 |
| BlsI | GCNGC | 2 cut(s) | 577, 580 |
| Bme1390I | CCNGG | 6 cut(s) | 21, 36, 398, 428, 450, 656 |
| Bme18I | GGWCC | 1 cut(s) | 39 |
| BmgBI | CACGTC | 1 cut(s) | 148 |
| BmgT120I | GGNCC | 4 cut(s) | 39, 74, 430, 431 |
| BmiI | GGNNCC | 5 cut(s) | 40, 186, 309, 432, 447 |
| BmrFI | CCNGG | 6 cut(s) | 21, 36, 398, 428, 450, 656 |
| BmrI | ACTGGG | 1 cut(s) | 125 |
| BmsI | GCATC | 1 cut(s) | 391 |
| BmuI | ACTGGG | 1 cut(s) | 125 |
| BpiI | GAAGAC | 1 cut(s) | 407 |
| BpmI | CTGGAG | 2 cut(s) | 71, 345 |
| BpuEI | CTTGAG | 1 cut(s) | 713 |
| BsaHI | GRCGYC | 1 cut(s) | 639 |
| BsaJI | CCNNGG | 6 cut(s) | 35, 87, 303, 427, 654, 655 |
| BsaWI | WCCGGW | 1 cut(s) | 322 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 41, 259, 260, 283, 721 |
| Bse118I | RCCGGY | 1 cut(s) | 41 |
| Bse1I | ACTGG | 3 cut(s) | 131, 362, 616 |
| BseBI | CCWGG | 6 cut(s) | 21, 36, 398, 428, 450, 656 |
| BseDI | CCNNGG | 6 cut(s) | 35, 87, 303, 427, 654, 655 |
| BseGI | GGATG | 3 cut(s) | 31, 249, 406 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 41, 259, 260, 283, 721 |
| BseMII | CTCAG | 2 cut(s) | 272, 493 |
| BseNI | ACTGG | 3 cut(s) | 131, 362, 616 |
| BseRI | GAGGAG | 1 cut(s) | 710 |
| BseSI | GKGCMC | 1 cut(s) | 434 |
| BseXI | GCAGC | 1 cut(s) | 565 |
| BseYI | CCCAGC | 1 cut(s) | 541 |
| Bsh1236I | CGCG | 2 cut(s) | 119, 165 |
| BshFI | GGCC | 2 cut(s) | 76, 432 |
| BshNI | GGYRCC | 1 cut(s) | 184 |
| BsiHKAI | GWGCWC | 3 cut(s) | 66, 171, 214 |
| BsiSI | CCGG | 2 cut(s) | 42, 323 |
| BslFI | GGGAC | 3 cut(s) | 52, 604, 697 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 41, 259, 260, 283, 721 |
| BsmAI | GTCTC | 1 cut(s) | 363 |
| BsmFI | GGGAC | 3 cut(s) | 52, 604, 697 |
| BsmI | GAATGC | 1 cut(s) | 45 |
| BsnI | GGCC | 2 cut(s) | 76, 432 |
| Bsp120I | GGGCCC | 1 cut(s) | 430 |
| Bsp1286I | GDGCHC | 6 cut(s) | 66, 171, 214, 272, 434, 469 |
| Bsp143I | GATC | 3 cut(s) | 547, 717, 724 |
| BspACI | CCGC | 5 cut(s) | 163, 300, 459, 575, 581 |
| BspANI | GGCC | 2 cut(s) | 76, 432 |
| BspCNI | CTCAG | 2 cut(s) | 271, 492 |
| BspFNI | CGCG | 2 cut(s) | 119, 165 |
| BspLI | GGNNCC | 5 cut(s) | 40, 186, 309, 432, 447 |
| BspT107I | GGYRCC | 1 cut(s) | 184 |
| BsrFI | RCCGGY | 1 cut(s) | 41 |
| BsrI | ACTGG | 3 cut(s) | 131, 362, 616 |
| BssAI | RCCGGY | 1 cut(s) | 41 |
| BssECI | CCNNGG | 6 cut(s) | 35, 87, 303, 427, 654, 655 |
| BssMI | GATC | 3 cut(s) | 547, 717, 724 |
| BssNI | GRCGYC | 1 cut(s) | 639 |
| BssSI | CACGAG | 3 cut(s) | 207, 353, 588 |
| Bst2BI | CACGAG | 3 cut(s) | 207, 353, 588 |
| Bst2UI | CCWGG | 6 cut(s) | 21, 36, 398, 428, 450, 656 |
| Bst4CI | ACNGT | 2 cut(s) | 494, 707 |
| Bst6I | CTCTTC | 1 cut(s) | 174 |
| BstACI | GRCGYC | 1 cut(s) | 639 |
| BstC8I | GCNNGC | 1 cut(s) | 167 |
| BstDEI | CTNAG | 3 cut(s) | 258, 282, 479 |
| BstDSI | CCRYGG | 1 cut(s) | 87 |
| BstF5I | GGATG | 3 cut(s) | 31, 249, 406 |
| BstFNI | CGCG | 2 cut(s) | 119, 165 |
| BstH2I | RGCGCY | 1 cut(s) | 394 |
| BstHHI | GCGC | 2 cut(s) | 393, 455 |
| BstKTI | GATC | 3 cut(s) | 550, 720, 727 |
| BstMAI | GTCTC | 1 cut(s) | 363 |
| BstMBI | GATC | 3 cut(s) | 547, 717, 724 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 61, 299, 452, 584 |
| BstNI | CCWGG | 6 cut(s) | 21, 36, 398, 428, 450, 656 |
| BstSCI | CCNGG | 6 cut(s) | 19, 34, 396, 426, 448, 654 |
| BstSLI | GKGCMC | 1 cut(s) | 434 |
| BstUI | CGCG | 2 cut(s) | 119, 165 |
| BstV1I | GCAGC | 1 cut(s) | 565 |
| BstV2I | GAAGAC | 1 cut(s) | 407 |
| BstX2I | RGATCY | 2 cut(s) | 547, 724 |
| BstYI | RGATCY | 2 cut(s) | 547, 724 |
| BsuRI | GGCC | 2 cut(s) | 76, 432 |
| BtgI | CCRYGG | 1 cut(s) | 87 |
| BtrI | CACGTC | 1 cut(s) | 148 |
| BtsCI | GGATG | 3 cut(s) | 31, 249, 406 |
| BtsIMutI | CAGTG | 1 cut(s) | 490 |
| Cac8I | GCNNGC | 1 cut(s) | 167 |
| CaiI | CAGNNNCTG | 1 cut(s) | 338 |
| CfoI | GCGC | 2 cut(s) | 393, 455 |
| Cfr10I | RCCGGY | 1 cut(s) | 41 |
| Cfr13I | GGNCC | 4 cut(s) | 39, 74, 430, 431 |
| CseI | GACGC | 4 cut(s) | 23, 108, 593, 647 |
| Csp6I | GTAC | 2 cut(s) | 185, 279 |
| CviQI | GTAC | 2 cut(s) | 185, 279 |
| DdeI | CTNAG | 3 cut(s) | 258, 282, 479 |
| DpnI | GATC | 3 cut(s) | 549, 719, 726 |
| DpnII | GATC | 3 cut(s) | 547, 717, 724 |
| Eam1104I | CTCTTC | 1 cut(s) | 174 |
| EarI | CTCTTC | 1 cut(s) | 174 |
| Eco24I | GRGCYC | 3 cut(s) | 272, 434, 469 |
| Eco47I | GGWCC | 1 cut(s) | 39 |
| Eco57I | CTGAAG | 1 cut(s) | 531 |
| EcoO109I | RGGNCCY | 1 cut(s) | 431 |
| EcoRII | CCWGG | 6 cut(s) | 19, 34, 396, 426, 448, 654 |
| EcoT38I | GRGCYC | 3 cut(s) | 272, 434, 469 |
| FaiI | YATR | 3 cut(s) | 530, 675, 686 |
| FaqI | GGGAC | 3 cut(s) | 52, 604, 697 |
| FauI | CCCGC | 2 cut(s) | 170, 466 |
| Fnu4HI | GCNGC | 2 cut(s) | 576, 579 |
| FokI | GGATG | 3 cut(s) | 18, 236, 413 |
| FriOI | GRGCYC | 3 cut(s) | 272, 434, 469 |
| Fsp4HI | GCNGC | 2 cut(s) | 576, 579 |
| FspBI | CTAG | 4 cut(s) | 104, 227, 405, 594 |
| GlaI | GCGC | 2 cut(s) | 392, 454 |
| GluI | GCNGC | 2 cut(s) | 576, 579 |
| GsaI | CCCAGC | 1 cut(s) | 545 |
| GsuI | CTGGAG | 2 cut(s) | 71, 345 |
| HaeII | RGCGCY | 1 cut(s) | 394 |
| HaeIII | GGCC | 2 cut(s) | 76, 432 |
| HapII | CCGG | 2 cut(s) | 42, 323 |
| HgaI | GACGC | 4 cut(s) | 23, 108, 593, 647 |
| HhaI | GCGC | 2 cut(s) | 393, 455 |
| Hin1I | GRCGYC | 1 cut(s) | 639 |
| Hin6I | GCGC | 2 cut(s) | 391, 453 |
| HinP1I | GCGC | 2 cut(s) | 391, 453 |
| HincII | GTYRAC | 1 cut(s) | 123 |
| HindII | GTYRAC | 1 cut(s) | 123 |
| HinfI | GANTC | 5 cut(s) | 68, 356, 423, 650, 710 |
| HpaII | CCGG | 2 cut(s) | 42, 323 |
| HphI | GGTGA | 1 cut(s) | 671 |
| Hpy166II | GTNNAC | 4 cut(s) | 91, 123, 224, 662 |
| Hpy188I | TCNGA | 7 cut(s) | 13, 247, 267, 422, 482, 511, 680 |
| Hpy188III | TCNNGA | 4 cut(s) | 50, 353, 470, 604 |
| Hpy8I | GTNNAC | 4 cut(s) | 91, 123, 224, 662 |
| HpyAV | CCTTC | 3 cut(s) | 18, 264, 404 |
| HpyCH4III | ACNGT | 2 cut(s) | 494, 707 |
| HpyCH4IV | ACGT | 1 cut(s) | 147 |
| HpyCH4V | TGCA | 1 cut(s) | 564 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 61, 299, 452, 584 |
| HpyF3I | CTNAG | 3 cut(s) | 258, 282, 479 |
| HpySE526I | ACGT | 1 cut(s) | 147 |
| Hsp92I | GRCGYC | 1 cut(s) | 639 |
| HspAI | GCGC | 2 cut(s) | 391, 453 |
| KpnI | GGTACC | 1 cut(s) | 188 |
| Kzo9I | GATC | 3 cut(s) | 547, 717, 724 |
| LmnI | GCTCC | 7 cut(s) | 22, 52, 217, 238, 379, 451, 688 |
| Lsp1109I | GCAGC | 1 cut(s) | 565 |
| LweI | GCATC | 1 cut(s) | 391 |
| MaeI | CTAG | 4 cut(s) | 104, 227, 405, 594 |
| MaeII | ACGT | 1 cut(s) | 147 |
| MaeIII | GTNAC | 1 cut(s) | 154 |
| MalI | GATC | 3 cut(s) | 549, 719, 726 |
| MboI | GATC | 3 cut(s) | 547, 717, 724 |
| MboII | GAAGA | 3 cut(s) | 191, 407, 542 |
| MflI | RGATCY | 2 cut(s) | 547, 724 |
| MhlI | GDGCHC | 6 cut(s) | 66, 171, 214, 272, 434, 469 |
| MluCI | AATT | 1 cut(s) | 216 |
| MluI | ACGCGT | 1 cut(s) | 117 |
| MlyI | GAGTC | 3 cut(s) | 365, 417, 719 |
| MroXI | GAANNNNTTC | 2 cut(s) | 312, 414 |
| MseI | TTAA | 1 cut(s) | 369 |
| MslI | CAYNNNNRTG | 1 cut(s) | 174 |
| MspI | CCGG | 2 cut(s) | 42, 323 |
| MspR9I | CCNGG | 6 cut(s) | 21, 36, 398, 428, 450, 656 |
| Mva1269I | GAATGC | 1 cut(s) | 45 |
| MvaI | CCWGG | 6 cut(s) | 21, 36, 398, 428, 450, 656 |
| MvnI | CGCG | 2 cut(s) | 119, 165 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 61, 299, 452, 584 |
| NdeII | GATC | 3 cut(s) | 547, 717, 724 |
| NlaIV | GGNNCC | 5 cut(s) | 40, 186, 309, 432, 447 |
| NmeAIII | GCCGAG | 1 cut(s) | 328 |
| NmuCI | GTSAC | 1 cut(s) | 154 |
| PasI | CCCWGGG | 1 cut(s) | 655 |
| PctI | GAATGC | 1 cut(s) | 45 |
| PdmI | GAANNNNTTC | 2 cut(s) | 312, 414 |
| PfeI | GAWTC | 2 cut(s) | 68, 650 |
| PfoI | TCCNGGA | 1 cut(s) | 396 |
| PkrI | GCNGC | 2 cut(s) | 577, 580 |
| PleI | GAGTC | 3 cut(s) | 364, 417, 718 |
| PpsI | GAGTC | 3 cut(s) | 364, 417, 718 |
| PshBI | ATTAAT | 1 cut(s) | 369 |
| Psp6I | CCWGG | 6 cut(s) | 19, 34, 396, 426, 448, 654 |
| PspFI | CCCAGC | 1 cut(s) | 541 |
| PspGI | CCWGG | 6 cut(s) | 19, 34, 396, 426, 448, 654 |
| PspN4I | GGNNCC | 5 cut(s) | 40, 186, 309, 432, 447 |
| PspOMI | GGGCCC | 1 cut(s) | 430 |
| PspPI | GGNCC | 4 cut(s) | 39, 74, 430, 431 |
| PstNI | CAGNNNCTG | 1 cut(s) | 338 |
| PsuI | RGATCY | 2 cut(s) | 547, 724 |
| RsaI | GTAC | 2 cut(s) | 186, 280 |
| RsaNI | GTAC | 2 cut(s) | 185, 279 |
| RseI | CAYNNNNRTG | 1 cut(s) | 174 |
| SaqAI | TTAA | 1 cut(s) | 369 |
| SatI | GCNGC | 2 cut(s) | 576, 579 |
| Sau3AI | GATC | 3 cut(s) | 547, 717, 724 |
| Sau96I | GGNCC | 4 cut(s) | 39, 74, 430, 431 |
| SchI | GAGTC | 3 cut(s) | 365, 417, 719 |
| ScrFI | CCNGG | 6 cut(s) | 21, 36, 398, 428, 450, 656 |
| SduI | GDGCHC | 6 cut(s) | 66, 171, 214, 272, 434, 469 |
| SfaNI | GCATC | 1 cut(s) | 391 |
| SinI | GGWCC | 1 cut(s) | 39 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 174 |
| SmlI | CTYRAG | 1 cut(s) | 692 |
| SmoI | CTYRAG | 1 cut(s) | 692 |
| SpeI | ACTAGT | 1 cut(s) | 226 |
| Sse9I | AATT | 1 cut(s) | 216 |
| SsiI | CCGC | 5 cut(s) | 163, 300, 459, 575, 581 |
| SspMI | CTAG | 4 cut(s) | 104, 227, 405, 594 |
| StyD4I | CCNGG | 6 cut(s) | 19, 34, 396, 426, 448, 654 |
| TaaI | ACNGT | 2 cut(s) | 494, 707 |
| TaiI | ACGT | 1 cut(s) | 150 |
| TaqI | TCGA | 1 cut(s) | 66 |
| TasI | AATT | 1 cut(s) | 216 |
| TauI | GCSGC | 1 cut(s) | 578 |
| TfiI | GAWTC | 2 cut(s) | 68, 650 |
| Tru1I | TTAA | 1 cut(s) | 369 |
| Tru9I | TTAA | 1 cut(s) | 369 |
| TscAI | CASTG | 1 cut(s) | 497 |
| TseFI | GTSAC | 1 cut(s) | 154 |
| TseI | GCWGC | 1 cut(s) | 578 |
| Tsp45I | GTSAC | 1 cut(s) | 154 |
| TspDTI | ATGAA | 1 cut(s) | 192 |
| TspGWI | ACGGA | 2 cut(s) | 266, 512 |
| TspRI | CASTG | 1 cut(s) | 497 |
| VpaK11BI | GGWCC | 1 cut(s) | 39 |
| VspI | ATTAAT | 1 cut(s) | 369 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 394 |
| XmnI | GAANNNNTTC | 2 cut(s) | 312, 414 |
| XspI | CTAG | 4 cut(s) | 104, 227, 405, 594 |