Plant mobile domain
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 1 cut(s) | 1011 |
| AccB1I | GGYRCC | 2 cut(s) | 629, 1011 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 626 |
| AccI | GTMKAC | 1 cut(s) | 173 |
| AccII | CGCG | 9 cut(s) | 122, 247, 249, 603, 876, 878, 1100, 1102, 1111 |
| AclWI | GGATC | 2 cut(s) | 694, 707 |
| AcoI | YGGCCR | 3 cut(s) | 595, 832, 1263 |
| AfaI | GTAC | 1 cut(s) | 1013 |
| AfeI | AGCGCT | 2 cut(s) | 145, 860 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 20, 21, 251, 356, 626, 970, 1268 |
| AflIII | ACRYGT | 1 cut(s) | 8 |
| AgeI | ACCGGT | 3 cut(s) | 419, 488, 1268 |
| AgsI | TTSAA | 3 cut(s) | 320, 719, 1001 |
| AjiI | CACGTC | 1 cut(s) | 11 |
| AjnI | CCWGG | 5 cut(s) | 19, 200, 504, 969, 1306 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 806, 838 |
| AluBI | AGCT | 7 cut(s) | 44, 916, 921, 982, 1124, 1250, 1292 |
| AluI | AGCT | 7 cut(s) | 44, 916, 921, 982, 1124, 1250, 1292 |
| Alw21I | GWGCWC | 2 cut(s) | 984, 1108 |
| Alw26I | GTCTC | 1 cut(s) | 118 |
| AlwI | GGATC | 2 cut(s) | 694, 707 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1307 |
| Aor51HI | AGCGCT | 2 cut(s) | 145, 860 |
| AoxI | GGCC | 7 cut(s) | 582, 595, 654, 832, 961, 1263, 1275 |
| ApeKI | GCWGC | 5 cut(s) | 44, 272, 757, 1247, 1256 |
| AsiGI | ACCGGT | 3 cut(s) | 419, 488, 1268 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 799, 821 |
| Asp718I | GGTACC | 1 cut(s) | 1011 |
| AspLEI | GCGC | 6 cut(s) | 146, 249, 415, 861, 878, 1102 |
| AspS9I | GGNCC | 4 cut(s) | 93, 111, 560, 583 |
| AsuC2I | CCSGG | 2 cut(s) | 91, 831 |
| AsuHPI | GGTGA | 2 cut(s) | 255, 331 |
| AsuII | TTCGAA | 1 cut(s) | 672 |
| AvaII | GGWCC | 3 cut(s) | 93, 111, 560 |
| BaeGI | GKGCMC | 1 cut(s) | 634 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 995, 1028 |
| BamHI | GGATCC | 1 cut(s) | 699 |
| BanI | GGYRCC | 2 cut(s) | 629, 1011 |
| BanII | GRGCYC | 3 cut(s) | 366, 612, 984 |
| BbsI | GAAGAC | 1 cut(s) | 1323 |
| Bbv12I | GWGCWC | 2 cut(s) | 984, 1108 |
| BbvI | GCAGC | 5 cut(s) | 31, 259, 744, 1243, 1259 |
| BccI | CCATC | 3 cut(s) | 350, 359, 403 |
| BceAI | ACGGC | 4 cut(s) | 582, 610, 890, 1262 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 404, 438, 1117, 1151 |
| BciT130I | CCWGG | 5 cut(s) | 21, 202, 506, 971, 1308 |
| BciVI | GTATCC | 1 cut(s) | 469 |
| BcnI | CCSGG | 2 cut(s) | 91, 831 |
| BcoDI | GTCTC | 1 cut(s) | 118 |
| BfaI | CTAG | 1 cut(s) | 135 |
| BfmI | CTRYAG | 2 cut(s) | 844, 1293 |
| BfoI | RGCGCY | 2 cut(s) | 147, 862 |
| BfuI | GTATCC | 1 cut(s) | 469 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 960 |
| BisI | GCNGC | 7 cut(s) | 45, 273, 758, 874, 1229, 1248, 1257 |
| BlpI | GCTNAGC | 1 cut(s) | 917 |
| BlsI | GCNGC | 7 cut(s) | 46, 274, 759, 875, 1230, 1249, 1258 |
| Bme1390I | CCNGG | 7 cut(s) | 21, 91, 202, 506, 831, 971, 1308 |
| Bme18I | GGWCC | 3 cut(s) | 93, 111, 560 |
| BmgBI | CACGTC | 1 cut(s) | 11 |
| BmgT120I | GGNCC | 4 cut(s) | 93, 111, 560, 583 |
| BmiI | GGNNCC | 5 cut(s) | 27, 631, 701, 824, 1013 |
| BmrFI | CCNGG | 7 cut(s) | 21, 91, 202, 506, 831, 971, 1308 |
| BmsI | GCATC | 2 cut(s) | 345, 673 |
| BpiI | GAAGAC | 1 cut(s) | 1323 |
| BpmI | CTGGAG | 2 cut(s) | 223, 1329 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1080 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 917 |
| Bpu14I | TTCGAA | 1 cut(s) | 672 |
| BpuEI | CTTGAG | 1 cut(s) | 1104 |
| BpuMI | CCSGG | 2 cut(s) | 91, 831 |
| Bsa29I | ATCGAT | 1 cut(s) | 354 |
| BsaJI | CCNNGG | 2 cut(s) | 20, 563 |
| BsaWI | WCCGGW | 3 cut(s) | 419, 488, 1268 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 806, 836 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 20, 21, 251, 356, 626, 970, 1268 |
| Bse118I | RCCGGY | 4 cut(s) | 28, 419, 488, 1268 |
| Bse1I | ACTGG | 4 cut(s) | 113, 183, 562, 620 |
| Bse3DI | GCAATG | 1 cut(s) | 585 |
| BseBI | CCWGG | 5 cut(s) | 21, 202, 506, 971, 1308 |
| BseCI | ATCGAT | 1 cut(s) | 354 |
| BseDI | CCNNGG | 2 cut(s) | 20, 563 |
| BseGI | GGATG | 3 cut(s) | 664, 979, 1159 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 20, 21, 251, 356, 626, 970, 1268 |
| BseMI | GCAATG | 1 cut(s) | 585 |
| BseMII | CTCAG | 4 cut(s) | 203, 998, 1163, 1179 |
| BseNI | ACTGG | 4 cut(s) | 113, 183, 562, 620 |
| BseRI | GAGGAG | 2 cut(s) | 926, 1076 |
| BseSI | GKGCMC | 1 cut(s) | 634 |
| BseX3I | CGGCCG | 1 cut(s) | 595 |
| BseXI | GCAGC | 5 cut(s) | 31, 259, 744, 1243, 1259 |
| Bsh1236I | CGCG | 9 cut(s) | 122, 247, 249, 603, 876, 878, 1100, 1102, 1111 |
| Bsh1285I | CGRYCG | 2 cut(s) | 424, 598 |
| BshFI | GGCC | 7 cut(s) | 584, 597, 656, 834, 963, 1265, 1277 |
| BshNI | GGYRCC | 2 cut(s) | 629, 1011 |
| BshTI | ACCGGT | 3 cut(s) | 419, 488, 1268 |
| BshVI | ATCGAT | 1 cut(s) | 354 |
| BsiEI | CGRYCG | 2 cut(s) | 424, 598 |
| BsiHKAI | GWGCWC | 2 cut(s) | 984, 1108 |
| BsiSI | CCGG | 8 cut(s) | 29, 91, 104, 420, 489, 831, 1262, 1269 |
| BslFI | GGGAC | 1 cut(s) | 56 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 20, 21, 251, 356, 626, 970, 1268 |
| BsmAI | GTCTC | 1 cut(s) | 118 |
| BsmFI | GGGAC | 1 cut(s) | 56 |
| BsnI | GGCC | 7 cut(s) | 584, 597, 656, 834, 963, 1265, 1277 |
| Bsp119I | TTCGAA | 1 cut(s) | 672 |
| Bsp1286I | GDGCHC | 5 cut(s) | 366, 612, 634, 984, 1108 |
| Bsp143I | GATC | 5 cut(s) | 226, 699, 850, 879, 1067 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 917 |
| BspANI | GGCC | 7 cut(s) | 584, 597, 656, 834, 963, 1265, 1277 |
| BspCNI | CTCAG | 4 cut(s) | 202, 999, 1162, 1178 |
| BspDI | ATCGAT | 1 cut(s) | 354 |
| BspFNI | CGCG | 9 cut(s) | 122, 247, 249, 603, 876, 878, 1100, 1102, 1111 |
| BspLI | GGNNCC | 5 cut(s) | 27, 631, 701, 824, 1013 |
| BspPI | GGATC | 2 cut(s) | 694, 707 |
| BspT104I | TTCGAA | 1 cut(s) | 672 |
| BspT107I | GGYRCC | 2 cut(s) | 629, 1011 |
| BsrDI | GCAATG | 1 cut(s) | 585 |
| BsrFI | RCCGGY | 4 cut(s) | 28, 419, 488, 1268 |
| BsrI | ACTGG | 4 cut(s) | 113, 183, 562, 620 |
| BssAI | RCCGGY | 4 cut(s) | 28, 419, 488, 1268 |
| BssECI | CCNNGG | 2 cut(s) | 20, 563 |
| BssMI | GATC | 5 cut(s) | 226, 699, 850, 879, 1067 |
| BssT1I | CCWWGG | 1 cut(s) | 563 |
| Bst2UI | CCWGG | 5 cut(s) | 21, 202, 506, 971, 1308 |
| Bst4CI | ACNGT | 4 cut(s) | 63, 470, 848, 1348 |
| Bst6I | CTCTTC | 1 cut(s) | 1327 |
| BstBI | TTCGAA | 1 cut(s) | 672 |
| BstDEI | CTNAG | 8 cut(s) | 82, 189, 917, 1007, 1080, 1149, 1165, 1362 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 968 |
| BstF5I | GGATG | 3 cut(s) | 664, 979, 1159 |
| BstFNI | CGCG | 9 cut(s) | 122, 247, 249, 603, 876, 878, 1100, 1102, 1111 |
| BstH2I | RGCGCY | 2 cut(s) | 147, 862 |
| BstHHI | GCGC | 6 cut(s) | 146, 249, 415, 861, 878, 1102 |
| BstKTI | GATC | 5 cut(s) | 229, 702, 853, 882, 1070 |
| BstMAI | GTCTC | 1 cut(s) | 118 |
| BstMBI | GATC | 5 cut(s) | 226, 699, 850, 879, 1067 |
| BstMCI | CGRYCG | 2 cut(s) | 424, 598 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 370, 960, 1090, 1099, 1108, 1253, 1256, 1262 |
| BstNI | CCWGG | 5 cut(s) | 21, 202, 506, 971, 1308 |
| BstNSI | RCATGY | 1 cut(s) | 373 |
| BstSCI | CCNGG | 7 cut(s) | 19, 89, 200, 504, 829, 969, 1306 |
| BstSFI | CTRYAG | 2 cut(s) | 844, 1293 |
| BstSLI | GKGCMC | 1 cut(s) | 634 |
| BstUI | CGCG | 9 cut(s) | 122, 247, 249, 603, 876, 878, 1100, 1102, 1111 |
| BstV1I | GCAGC | 5 cut(s) | 31, 259, 744, 1243, 1259 |
| BstV2I | GAAGAC | 1 cut(s) | 1323 |
| BstX2I | RGATCY | 1 cut(s) | 699 |
| BstYI | RGATCY | 1 cut(s) | 699 |
| BstZI | CGGCCG | 1 cut(s) | 595 |
| Bsu15I | ATCGAT | 1 cut(s) | 354 |
| BsuI | GTATCC | 1 cut(s) | 469 |
| BsuRI | GGCC | 7 cut(s) | 584, 597, 656, 834, 963, 1265, 1277 |
| BsuTUI | ATCGAT | 1 cut(s) | 354 |
| BtrI | CACGTC | 1 cut(s) | 11 |
| BtsCI | GGATG | 3 cut(s) | 664, 979, 1159 |
| BtsI | GCAGTG | 2 cut(s) | 294, 426 |
| BtsIMutI | CAGTG | 5 cut(s) | 294, 426, 555, 853, 1029 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1307 |
| CfoI | GCGC | 6 cut(s) | 146, 249, 415, 861, 878, 1102 |
| Cfr10I | RCCGGY | 4 cut(s) | 28, 419, 488, 1268 |
| Cfr13I | GGNCC | 4 cut(s) | 93, 111, 560, 583 |
| ClaI | ATCGAT | 1 cut(s) | 354 |
| CseI | GACGC | 1 cut(s) | 1100 |
| Csp6I | GTAC | 1 cut(s) | 1012 |
| CspAI | ACCGGT | 3 cut(s) | 419, 488, 1268 |
| CviAII | CATG | 4 cut(s) | 370, 374, 661, 687 |
| CviQI | GTAC | 1 cut(s) | 1012 |
| DdeI | CTNAG | 8 cut(s) | 82, 189, 917, 1007, 1080, 1149, 1165, 1362 |
| DpnI | GATC | 5 cut(s) | 228, 701, 852, 881, 1069 |
| DpnII | GATC | 5 cut(s) | 226, 699, 850, 879, 1067 |
| EaeI | YGGCCR | 3 cut(s) | 595, 832, 1263 |
| EagI | CGGCCG | 1 cut(s) | 595 |
| Eam1104I | CTCTTC | 1 cut(s) | 1327 |
| EarI | CTCTTC | 1 cut(s) | 1327 |
| EciI | GGCGGA | 1 cut(s) | 532 |
| Ecl136II | GAGCTC | 1 cut(s) | 982 |
| EclXI | CGGCCG | 1 cut(s) | 595 |
| Eco130I | CCWWGG | 1 cut(s) | 563 |
| Eco24I | GRGCYC | 3 cut(s) | 366, 612, 984 |
| Eco47I | GGWCC | 3 cut(s) | 93, 111, 560 |
| Eco47III | AGCGCT | 2 cut(s) | 145, 860 |
| Eco52I | CGGCCG | 1 cut(s) | 595 |
| Eco53kI | GAGCTC | 1 cut(s) | 982 |
| EcoICRI | GAGCTC | 1 cut(s) | 982 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 968 |
| EcoRII | CCWGG | 5 cut(s) | 19, 200, 504, 969, 1306 |
| EcoT14I | CCWWGG | 1 cut(s) | 563 |
| EcoT22I | ATGCAT | 2 cut(s) | 375, 666 |
| EcoT38I | GRGCYC | 3 cut(s) | 366, 612, 984 |
| ErhI | CCWWGG | 1 cut(s) | 563 |
| FaeI | CATG | 4 cut(s) | 373, 377, 664, 690 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 515, 547 |
| FaqI | GGGAC | 1 cut(s) | 56 |
| FatI | CATG | 4 cut(s) | 369, 373, 660, 686 |
| FauI | CCCGC | 3 cut(s) | 127, 252, 1105 |
| FblI | GTMKAC | 1 cut(s) | 173 |
| Fnu4HI | GCNGC | 7 cut(s) | 45, 273, 758, 874, 1229, 1248, 1257 |
| FokI | GGATG | 3 cut(s) | 651, 986, 1166 |
| FriOI | GRGCYC | 3 cut(s) | 366, 612, 984 |
| Fsp4HI | GCNGC | 7 cut(s) | 45, 273, 758, 874, 1229, 1248, 1257 |
| FspBI | CTAG | 1 cut(s) | 135 |
| GlaI | GCGC | 6 cut(s) | 145, 248, 414, 860, 877, 1101 |
| GluI | GCNGC | 7 cut(s) | 45, 273, 758, 874, 1229, 1248, 1257 |
| GsuI | CTGGAG | 2 cut(s) | 223, 1329 |
| HaeII | RGCGCY | 2 cut(s) | 147, 862 |
| HaeIII | GGCC | 7 cut(s) | 584, 597, 656, 834, 963, 1265, 1277 |
| HapII | CCGG | 8 cut(s) | 29, 91, 104, 420, 489, 831, 1262, 1269 |
| HgaI | GACGC | 1 cut(s) | 1100 |
| HhaI | GCGC | 6 cut(s) | 146, 249, 415, 861, 878, 1102 |
| Hin1II | CATG | 4 cut(s) | 373, 377, 664, 690 |
| Hin6I | GCGC | 6 cut(s) | 144, 247, 413, 859, 876, 1100 |
| HinP1I | GCGC | 6 cut(s) | 144, 247, 413, 859, 876, 1100 |
| HincII | GTYRAC | 1 cut(s) | 174 |
| HindII | GTYRAC | 1 cut(s) | 174 |
| HinfI | GANTC | 8 cut(s) | 69, 86, 126, 197, 386, 715, 1311, 1319 |
| HpaII | CCGG | 8 cut(s) | 29, 91, 104, 420, 489, 831, 1262, 1269 |
| HphI | GGTGA | 2 cut(s) | 255, 331 |
| Hpy166II | GTNNAC | 2 cut(s) | 174, 263 |
| Hpy188I | TCNGA | 5 cut(s) | 192, 614, 892, 1168, 1330 |
| Hpy188III | TCNNGA | 7 cut(s) | 66, 135, 289, 712, 854, 1001, 1151 |
| Hpy8I | GTNNAC | 2 cut(s) | 174, 263 |
| Hpy99I | CGWCG | 4 cut(s) | 175, 409, 603, 1142 |
| HpyAV | CCTTC | 3 cut(s) | 679, 836, 1155 |
| HpyCH4III | ACNGT | 4 cut(s) | 63, 470, 848, 1348 |
| HpyCH4IV | ACGT | 2 cut(s) | 10, 99 |
| HpyCH4V | TGCA | 6 cut(s) | 373, 522, 537, 578, 664, 1239 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 370, 960, 1090, 1099, 1108, 1253, 1256, 1262 |
| HpyF3I | CTNAG | 8 cut(s) | 82, 189, 917, 1007, 1080, 1149, 1165, 1362 |
| HpySE526I | ACGT | 2 cut(s) | 10, 99 |
| Hsp92II | CATG | 4 cut(s) | 373, 377, 664, 690 |
| HspAI | GCGC | 6 cut(s) | 144, 247, 413, 859, 876, 1100 |
| KpnI | GGTACC | 1 cut(s) | 1015 |
| Kzo9I | GATC | 5 cut(s) | 226, 699, 850, 879, 1067 |
| LmnI | GCTCC | 4 cut(s) | 83, 913, 1063, 1264 |
| Lsp1109I | GCAGC | 5 cut(s) | 31, 259, 744, 1243, 1259 |
| LweI | GCATC | 2 cut(s) | 345, 673 |
| MaeI | CTAG | 1 cut(s) | 135 |
| MaeII | ACGT | 2 cut(s) | 10, 99 |
| MaeIII | GTNAC | 3 cut(s) | 345, 484, 988 |
| MalI | GATC | 5 cut(s) | 228, 701, 852, 881, 1069 |
| MboI | GATC | 5 cut(s) | 226, 699, 850, 879, 1067 |
| MboII | GAAGA | 8 cut(s) | 43, 807, 1167, 1176, 1179, 1314, 1317, 1328 |
| MflI | RGATCY | 1 cut(s) | 699 |
| MhlI | GDGCHC | 5 cut(s) | 366, 612, 634, 984, 1108 |
| MluCI | AATT | 4 cut(s) | 320, 380, 817, 1034 |
| MlyI | GAGTC | 6 cut(s) | 78, 80, 120, 191, 1313, 1320 |
| MmeI | TCCRAC | 1 cut(s) | 792 |
| Mph1103I | ATGCAT | 2 cut(s) | 375, 666 |
| MroXI | GAANNNNTTC | 2 cut(s) | 799, 821 |
| MspA1I | CMGCKG | 2 cut(s) | 44, 268 |
| MspI | CCGG | 8 cut(s) | 29, 91, 104, 420, 489, 831, 1262, 1269 |
| MspR9I | CCNGG | 7 cut(s) | 21, 91, 202, 506, 831, 971, 1308 |
| MvaI | CCWGG | 5 cut(s) | 21, 202, 506, 971, 1308 |
| MvnI | CGCG | 9 cut(s) | 122, 247, 249, 603, 876, 878, 1100, 1102, 1111 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 370, 960, 1090, 1099, 1108, 1253, 1256, 1262 |
| NciI | CCSGG | 2 cut(s) | 91, 831 |
| NdeII | GATC | 5 cut(s) | 226, 699, 850, 879, 1067 |
| NlaIII | CATG | 4 cut(s) | 373, 377, 664, 690 |
| NlaIV | GGNNCC | 5 cut(s) | 27, 631, 701, 824, 1013 |
| NmuCI | GTSAC | 1 cut(s) | 988 |
| NsiI | ATGCAT | 2 cut(s) | 375, 666 |
| NspI | RCATGY | 1 cut(s) | 373 |
| NspV | TTCGAA | 1 cut(s) | 672 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 600 |
| PdmI | GAANNNNTTC | 2 cut(s) | 799, 821 |
| PfeI | GAWTC | 2 cut(s) | 386, 715 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 626 |
| PfoI | TCCNGGA | 4 cut(s) | 89, 200, 504, 969 |
| PinAI | ACCGGT | 3 cut(s) | 419, 488, 1268 |
| PkrI | GCNGC | 7 cut(s) | 46, 274, 759, 875, 1230, 1249, 1258 |
| PleI | GAGTC | 6 cut(s) | 77, 80, 120, 191, 1313, 1319 |
| PpsI | GAGTC | 6 cut(s) | 77, 80, 120, 191, 1313, 1319 |
| Psp124BI | GAGCTC | 1 cut(s) | 984 |
| Psp6I | CCWGG | 5 cut(s) | 19, 200, 504, 969, 1306 |
| PspGI | CCWGG | 5 cut(s) | 19, 200, 504, 969, 1306 |
| PspN4I | GGNNCC | 5 cut(s) | 27, 631, 701, 824, 1013 |
| PspPI | GGNCC | 4 cut(s) | 93, 111, 560, 583 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1307 |
| PsuI | RGATCY | 1 cut(s) | 699 |
| PvuII | CAGCTG | 1 cut(s) | 44 |
| RsaI | GTAC | 1 cut(s) | 1013 |
| RsaNI | GTAC | 1 cut(s) | 1012 |
| SacI | GAGCTC | 1 cut(s) | 984 |
| SalI | GTCGAC | 1 cut(s) | 172 |
| SatI | GCNGC | 7 cut(s) | 45, 273, 758, 874, 1229, 1248, 1257 |
| Sau3AI | GATC | 5 cut(s) | 226, 699, 850, 879, 1067 |
| Sau96I | GGNCC | 4 cut(s) | 93, 111, 560, 583 |
| SchI | GAGTC | 6 cut(s) | 78, 80, 120, 191, 1313, 1320 |
| ScrFI | CCNGG | 7 cut(s) | 21, 91, 202, 506, 831, 971, 1308 |
| SduI | GDGCHC | 5 cut(s) | 366, 612, 634, 984, 1108 |
| SfaNI | GCATC | 2 cut(s) | 345, 673 |
| SfcI | CTRYAG | 2 cut(s) | 844, 1293 |
| SfuI | TTCGAA | 1 cut(s) | 672 |
| SinI | GGWCC | 3 cut(s) | 93, 111, 560 |
| SmlI | CTYRAG | 1 cut(s) | 1119 |
| SmoI | CTYRAG | 1 cut(s) | 1119 |
| Sse9I | AATT | 4 cut(s) | 320, 380, 817, 1034 |
| SspI | AATATT | 1 cut(s) | 512 |
| SspMI | CTAG | 1 cut(s) | 135 |
| SstI | GAGCTC | 1 cut(s) | 984 |
| StyD4I | CCNGG | 7 cut(s) | 19, 89, 200, 504, 829, 969, 1306 |
| StyI | CCWWGG | 1 cut(s) | 563 |
| TaaI | ACNGT | 4 cut(s) | 63, 470, 848, 1348 |
| TaiI | ACGT | 2 cut(s) | 13, 102 |
| TaqI | TCGA | 7 cut(s) | 173, 354, 404, 672, 705, 1140, 1314 |
| TaqII | GACCGA | 1 cut(s) | 314 |
| TasI | AATT | 4 cut(s) | 320, 380, 817, 1034 |
| TauI | GCSGC | 2 cut(s) | 876, 1231 |
| TfiI | GAWTC | 2 cut(s) | 386, 715 |
| TscAI | CASTG | 5 cut(s) | 301, 433, 562, 853, 1036 |
| TseFI | GTSAC | 1 cut(s) | 988 |
| TseI | GCWGC | 5 cut(s) | 44, 272, 757, 1247, 1256 |
| Tsp45I | GTSAC | 1 cut(s) | 988 |
| TspDTI | ATGAA | 4 cut(s) | 17, 43, 517, 789 |
| TspGWI | ACGGA | 1 cut(s) | 159 |
| TspRI | CASTG | 5 cut(s) | 301, 433, 562, 853, 1036 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 626 |
| VpaK11BI | GGWCC | 3 cut(s) | 93, 111, 560 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 968 |
| XbaI | TCTAGA | 1 cut(s) | 134 |
| XceI | RCATGY | 1 cut(s) | 373 |
| XmiI | GTMKAC | 1 cut(s) | 173 |
| XmnI | GAANNNNTTC | 2 cut(s) | 799, 821 |
| XspI | CTAG | 1 cut(s) | 135 |
| Zsp2I | ATGCAT | 2 cut(s) | 375, 666 |