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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 207 |
| AatII | GACGTC | 1 cut(s) | 266 |
| Acc36I | ACCTGC | 1 cut(s) | 349 |
| AccB1I | GGYRCC | 1 cut(s) | 581 |
| AccBSI | CCGCTC | 1 cut(s) | 1538 |
| AccI | GTMKAC | 2 cut(s) | 266, 1553 |
| AccII | CGCG | 7 cut(s) | 326, 708, 923, 1298, 1391, 1491, 1549 |
| AclWI | GGATC | 5 cut(s) | 27, 210, 536, 581, 659 |
| AcoI | YGGCCR | 1 cut(s) | 525 |
| AcuI | CTGAAG | 1 cut(s) | 96 |
| AcyI | GRCGYC | 2 cut(s) | 263, 582 |
| AfaI | GTAC | 7 cut(s) | 414, 576, 711, 818, 969, 1372, 1703 |
| AflIII | ACRYGT | 1 cut(s) | 1296 |
| AgsI | TTSAA | 9 cut(s) | 246, 716, 1073, 1148, 1255, 1305, 1336, 1367, 1377 |
| AjiI | CACGTC | 1 cut(s) | 334 |
| AjnI | CCWGG | 9 cut(s) | 81, 418, 460, 803, 935, 1062, 1415, 1591, 1658 |
| AluBI | AGCT | 6 cut(s) | 375, 880, 944, 1169, 1196, 1205 |
| AluI | AGCT | 6 cut(s) | 375, 880, 944, 1169, 1196, 1205 |
| Alw26I | GTCTC | 7 cut(s) | 349, 1017, 1161, 1272, 1479, 1504, 1624 |
| AlwI | GGATC | 5 cut(s) | 27, 210, 536, 581, 659 |
| ApeKI | GCWGC | 8 cut(s) | 26, 125, 650, 653, 917, 1139, 1205, 1208 |
| AseI | ATTAAT | 1 cut(s) | 906 |
| AspLEI | GCGC | 3 cut(s) | 286, 584, 797 |
| AsuC2I | CCSGG | 3 cut(s) | 232, 729, 792 |
| AsuHPI | GGTGA | 4 cut(s) | 266, 856, 1102, 1648 |
| AvaII | GGWCC | 4 cut(s) | 154, 1053, 1469, 1564 |
| AxyI | CCTNAGG | 1 cut(s) | 45 |
| BanI | GGYRCC | 1 cut(s) | 581 |
| BanII | GRGCYC | 3 cut(s) | 70, 759, 811 |
| BauI | CACGAG | 1 cut(s) | 515 |
| BbsI | GAAGAC | 1 cut(s) | 758 |
| BbvI | GCAGC | 8 cut(s) | 13, 112, 637, 640, 929, 1151, 1192, 1195 |
| BccI | CCATC | 8 cut(s) | 746, 817, 854, 1352, 1392, 1642, 1648, 1667 |
| BceAI | ACGGC | 3 cut(s) | 819, 1110, 1200 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 316, 350 |
| BciT130I | CCWGG | 9 cut(s) | 83, 420, 462, 805, 937, 1064, 1417, 1593, 1660 |
| BcnI | CCSGG | 3 cut(s) | 232, 729, 792 |
| BcoDI | GTCTC | 7 cut(s) | 349, 1017, 1161, 1272, 1479, 1504, 1624 |
| BfaI | CTAG | 7 cut(s) | 662, 1103, 1124, 1136, 1166, 1218, 1328 |
| BfoI | RGCGCY | 2 cut(s) | 287, 585 |
| BfuAI | ACCTGC | 1 cut(s) | 349 |
| BmcAI | AGTACT | 2 cut(s) | 818, 1372 |
| Bme18I | GGWCC | 4 cut(s) | 154, 1053, 1469, 1564 |
| BmgBI | CACGTC | 1 cut(s) | 334 |
| BmsI | GCATC | 3 cut(s) | 13, 806, 1624 |
| BpiI | GAAGAC | 1 cut(s) | 758 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1621, 1653 |
| BpmI | CTGGAG | 3 cut(s) | 205, 1614, 1648 |
| Bpu10I | CCTNAGC | 4 cut(s) | 675, 810, 945, 1170 |
| BpuEI | CTTGAG | 2 cut(s) | 471, 1394 |
| BpuMI | CCSGG | 3 cut(s) | 232, 729, 792 |
| BsaBI | GATNNNNATC | 1 cut(s) | 506 |
| BsaHI | GRCGYC | 2 cut(s) | 263, 582 |
| BsaI | GGTCTC | 2 cut(s) | 349, 1624 |
| BsaWI | WCCGGW | 1 cut(s) | 1698 |
| Bse118I | RCCGGY | 1 cut(s) | 593 |
| Bse1I | ACTGG | 6 cut(s) | 59, 207, 318, 353, 696, 701 |
| Bse21I | CCTNAGG | 1 cut(s) | 45 |
| Bse3DI | GCAATG | 1 cut(s) | 1118 |
| Bse8I | GATNNNNATC | 1 cut(s) | 506 |
| BseBI | CCWGG | 9 cut(s) | 83, 420, 462, 805, 937, 1064, 1417, 1593, 1660 |
| BseGI | GGATG | 7 cut(s) | 28, 187, 439, 643, 757, 780, 797 |
| BseJI | GATNNNNATC | 1 cut(s) | 506 |
| BseMI | GCAATG | 1 cut(s) | 1118 |
| BseMII | CTCAG | 8 cut(s) | 9, 59, 666, 761, 824, 849, 959, 1184 |
| BseNI | ACTGG | 6 cut(s) | 59, 207, 318, 353, 696, 701 |
| BseRI | GAGGAG | 2 cut(s) | 33, 1467 |
| BseX3I | CGGCCG | 1 cut(s) | 525 |
| BseXI | GCAGC | 8 cut(s) | 13, 112, 637, 640, 929, 1151, 1192, 1195 |
| BsgI | GTGCAG | 4 cut(s) | 12, 377, 480, 497 |
| Bsh1236I | CGCG | 7 cut(s) | 326, 708, 923, 1298, 1391, 1491, 1549 |
| Bsh1285I | CGRYCG | 3 cut(s) | 432, 528, 1536 |
| BshNI | GGYRCC | 1 cut(s) | 581 |
| BsiEI | CGRYCG | 3 cut(s) | 432, 528, 1536 |
| BsiSI | CCGG | 7 cut(s) | 231, 524, 594, 608, 729, 791, 1699 |
| BslFI | GGGAC | 3 cut(s) | 262, 274, 759 |
| BsmAI | GTCTC | 7 cut(s) | 349, 1017, 1161, 1272, 1479, 1504, 1624 |
| BsmBI | CGTCTC | 2 cut(s) | 1479, 1504 |
| BsmFI | GGGAC | 3 cut(s) | 262, 274, 759 |
| BsmI | GAATGC | 1 cut(s) | 1331 |
| Bso31I | GGTCTC | 2 cut(s) | 349, 1624 |
| Bsp1286I | GDGCHC | 3 cut(s) | 70, 759, 811 |
| Bsp1407I | TGTACA | 1 cut(s) | 967 |
| Bsp143I | GATC | 7 cut(s) | 32, 196, 215, 429, 541, 586, 664 |
| Bsp19I | CCATGG | 1 cut(s) | 170 |
| Bsp68I | TCGCGA | 1 cut(s) | 326 |
| BspCNI | CTCAG | 8 cut(s) | 10, 58, 667, 762, 823, 850, 958, 1183 |
| BspFNI | CGCG | 7 cut(s) | 326, 708, 923, 1298, 1391, 1491, 1549 |
| BspHI | TCATGA | 1 cut(s) | 634 |
| BspMI | ACCTGC | 1 cut(s) | 349 |
| BspPI | GGATC | 5 cut(s) | 27, 210, 536, 581, 659 |
| BspQI | GCTCTTC | 2 cut(s) | 247, 1545 |
| BspT107I | GGYRCC | 1 cut(s) | 581 |
| BspTNI | GGTCTC | 2 cut(s) | 349, 1624 |
| BsrBI | CCGCTC | 1 cut(s) | 1538 |
| BsrDI | GCAATG | 1 cut(s) | 1118 |
| BsrFI | RCCGGY | 1 cut(s) | 593 |
| BsrGI | TGTACA | 1 cut(s) | 967 |
| BsrI | ACTGG | 6 cut(s) | 59, 207, 318, 353, 696, 701 |
| BssAI | RCCGGY | 1 cut(s) | 593 |
| BssMI | GATC | 7 cut(s) | 32, 196, 215, 429, 541, 586, 664 |
| BssNI | GRCGYC | 2 cut(s) | 263, 582 |
| BssSI | CACGAG | 1 cut(s) | 515 |
| BssT1I | CCWWGG | 2 cut(s) | 170, 1273 |
| Bst2BI | CACGAG | 1 cut(s) | 515 |
| Bst2UI | CCWGG | 9 cut(s) | 83, 420, 462, 805, 937, 1064, 1417, 1593, 1660 |
| Bst4CI | ACNGT | 2 cut(s) | 928, 1087 |
| Bst6I | CTCTTC | 4 cut(s) | 171, 247, 1545, 1697 |
| BstACI | GRCGYC | 2 cut(s) | 263, 582 |
| BstAUI | TGTACA | 1 cut(s) | 967 |
| BstDEI | CTNAG | 8 cut(s) | 18, 45, 675, 770, 810, 858, 945, 1170 |
| BstDSI | CCRYGG | 3 cut(s) | 170, 288, 1547 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1169 |
| BstF5I | GGATG | 7 cut(s) | 28, 187, 439, 643, 757, 780, 797 |
| BstFNI | CGCG | 7 cut(s) | 326, 708, 923, 1298, 1391, 1491, 1549 |
| BstH2I | RGCGCY | 2 cut(s) | 287, 585 |
| BstHHI | GCGC | 3 cut(s) | 286, 584, 797 |
| BstKTI | GATC | 7 cut(s) | 35, 199, 218, 432, 544, 589, 667 |
| BstMAI | GTCTC | 7 cut(s) | 349, 1017, 1161, 1272, 1479, 1504, 1624 |
| BstMBI | GATC | 7 cut(s) | 32, 196, 215, 429, 541, 586, 664 |
| BstMCI | CGRYCG | 3 cut(s) | 432, 528, 1536 |
| BstNI | CCWGG | 9 cut(s) | 83, 420, 462, 805, 937, 1064, 1417, 1593, 1660 |
| BstUI | CGCG | 7 cut(s) | 326, 708, 923, 1298, 1391, 1491, 1549 |
| BstV1I | GCAGC | 8 cut(s) | 13, 112, 637, 640, 929, 1151, 1192, 1195 |
| BstV2I | GAAGAC | 1 cut(s) | 758 |
| BstX2I | RGATCY | 1 cut(s) | 664 |
| BstYI | RGATCY | 1 cut(s) | 664 |
| BstZI | CGGCCG | 1 cut(s) | 525 |
| Bsu36I | CCTNAGG | 1 cut(s) | 45 |
| BtgI | CCRYGG | 3 cut(s) | 170, 288, 1547 |
| BtgZI | GCGATG | 2 cut(s) | 1166, 1601 |
| BtrI | CACGTC | 1 cut(s) | 334 |
| BtsCI | GGATG | 7 cut(s) | 28, 187, 439, 643, 757, 780, 797 |
| BtsI | GCAGTG | 1 cut(s) | 668 |
| BtsIMutI | CAGTG | 6 cut(s) | 66, 162, 360, 497, 668, 849 |
| BtuMI | TCGCGA | 1 cut(s) | 326 |
| BveI | ACCTGC | 1 cut(s) | 349 |
| CciI | TCATGA | 1 cut(s) | 634 |
| CfoI | GCGC | 3 cut(s) | 286, 584, 797 |
| Cfr10I | RCCGGY | 1 cut(s) | 593 |
| Cfr42I | CCGCGG | 1 cut(s) | 1550 |
| CseI | GACGC | 1 cut(s) | 1223 |
| Csp6I | GTAC | 7 cut(s) | 413, 575, 710, 817, 968, 1371, 1702 |
| CviAII | CATG | 4 cut(s) | 171, 635, 1109, 1398 |
| CviQI | GTAC | 7 cut(s) | 413, 575, 710, 817, 968, 1371, 1702 |
| DdeI | CTNAG | 8 cut(s) | 18, 45, 675, 770, 810, 858, 945, 1170 |
| DinI | GGCGCC | 1 cut(s) | 583 |
| DpnI | GATC | 7 cut(s) | 34, 198, 217, 431, 543, 588, 666 |
| DpnII | GATC | 7 cut(s) | 32, 196, 215, 429, 541, 586, 664 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 207 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 207 |
| EaeI | YGGCCR | 1 cut(s) | 525 |
| EagI | CGGCCG | 1 cut(s) | 525 |
| Eam1104I | CTCTTC | 4 cut(s) | 171, 247, 1545, 1697 |
| EarI | CTCTTC | 4 cut(s) | 171, 247, 1545, 1697 |
| EciI | GGCGGA | 2 cut(s) | 790, 1465 |
| EclXI | CGGCCG | 1 cut(s) | 525 |
| Eco130I | CCWWGG | 2 cut(s) | 170, 1273 |
| Eco24I | GRGCYC | 3 cut(s) | 70, 759, 811 |
| Eco31I | GGTCTC | 2 cut(s) | 349, 1624 |
| Eco47I | GGWCC | 4 cut(s) | 154, 1053, 1469, 1564 |
| Eco52I | CGGCCG | 1 cut(s) | 525 |
| Eco57I | CTGAAG | 1 cut(s) | 96 |
| Eco81I | CCTNAGG | 1 cut(s) | 45 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1169 |
| EcoO109I | RGGNCCY | 1 cut(s) | 961 |
| EcoRII | CCWGG | 9 cut(s) | 81, 418, 460, 803, 935, 1062, 1415, 1591, 1658 |
| EcoT14I | CCWWGG | 2 cut(s) | 170, 1273 |
| EcoT38I | GRGCYC | 3 cut(s) | 70, 759, 811 |
| EgeI | GGCGCC | 1 cut(s) | 583 |
| EheI | GGCGCC | 1 cut(s) | 583 |
| ErhI | CCWWGG | 2 cut(s) | 170, 1273 |
| Esp3I | CGTCTC | 2 cut(s) | 1479, 1504 |
| FaeI | CATG | 4 cut(s) | 174, 638, 1112, 1401 |
| FaqI | GGGAC | 3 cut(s) | 262, 274, 759 |
| FatI | CATG | 4 cut(s) | 170, 634, 1108, 1397 |
| FauI | CCCGC | 2 cut(s) | 655, 1107 |
| FblI | GTMKAC | 2 cut(s) | 266, 1553 |
| FokI | GGATG | 7 cut(s) | 35, 194, 426, 630, 764, 767, 784 |
| FriOI | GRGCYC | 3 cut(s) | 70, 759, 811 |
| FspBI | CTAG | 7 cut(s) | 662, 1103, 1124, 1136, 1166, 1218, 1328 |
| GlaI | GCGC | 3 cut(s) | 285, 583, 796 |
| GsuI | CTGGAG | 3 cut(s) | 205, 1614, 1648 |
| HaeII | RGCGCY | 2 cut(s) | 287, 585 |
| HapII | CCGG | 7 cut(s) | 231, 524, 594, 608, 729, 791, 1699 |
| HgaI | GACGC | 1 cut(s) | 1223 |
| HhaI | GCGC | 3 cut(s) | 286, 584, 797 |
| Hin1I | GRCGYC | 2 cut(s) | 263, 582 |
| Hin1II | CATG | 4 cut(s) | 174, 638, 1112, 1401 |
| Hin6I | GCGC | 3 cut(s) | 284, 582, 795 |
| HinP1I | GCGC | 3 cut(s) | 284, 582, 795 |
| HinfI | GANTC | 6 cut(s) | 535, 772, 889, 1042, 1115, 1324 |
| HpaII | CCGG | 7 cut(s) | 231, 524, 594, 608, 729, 791, 1699 |
| HphI | GGTGA | 4 cut(s) | 266, 856, 1102, 1648 |
| Hpy166II | GTNNAC | 3 cut(s) | 267, 864, 1554 |
| Hpy188I | TCNGA | 7 cut(s) | 19, 115, 154, 771, 1053, 1568, 1647 |
| Hpy8I | GTNNAC | 3 cut(s) | 267, 864, 1554 |
| Hpy99I | CGWCG | 5 cut(s) | 213, 216, 335, 437, 1217 |
| HpyAV | CCTTC | 8 cut(s) | 120, 230, 251, 693, 1321, 1510, 1657, 1695 |
| HpyCH4III | ACNGT | 2 cut(s) | 928, 1087 |
| HpyCH4IV | ACGT | 5 cut(s) | 263, 333, 411, 763, 1445 |
| HpyCH4V | TGCA | 7 cut(s) | 29, 337, 358, 497, 514, 569, 931 |
| HpyF3I | CTNAG | 8 cut(s) | 18, 45, 675, 770, 810, 858, 945, 1170 |
| HpySE526I | ACGT | 5 cut(s) | 263, 333, 411, 763, 1445 |
| Hsp92I | GRCGYC | 2 cut(s) | 263, 582 |
| Hsp92II | CATG | 4 cut(s) | 174, 638, 1112, 1401 |
| HspAI | GCGC | 3 cut(s) | 284, 582, 795 |
| KasI | GGCGCC | 1 cut(s) | 581 |
| KroI | GCCGGC | 1 cut(s) | 593 |
| KroNI | GCCGGC | 1 cut(s) | 595 |
| KspI | CCGCGG | 1 cut(s) | 1550 |
| Kzo9I | GATC | 7 cut(s) | 32, 196, 215, 429, 541, 586, 664 |
| LguI | GCTCTTC | 2 cut(s) | 247, 1545 |
| LmnI | GCTCC | 2 cut(s) | 762, 1495 |
| Lsp1109I | GCAGC | 8 cut(s) | 13, 112, 637, 640, 929, 1151, 1192, 1195 |
| LweI | GCATC | 3 cut(s) | 13, 806, 1624 |
| MaeI | CTAG | 7 cut(s) | 662, 1103, 1124, 1136, 1166, 1218, 1328 |
| MaeII | ACGT | 5 cut(s) | 263, 333, 411, 763, 1445 |
| MaeIII | GTNAC | 4 cut(s) | 882, 1090, 1265, 1654 |
| MalI | GATC | 7 cut(s) | 34, 198, 217, 431, 543, 588, 666 |
| MbiI | CCGCTC | 1 cut(s) | 1538 |
| MboI | GATC | 7 cut(s) | 32, 196, 215, 429, 541, 586, 664 |
| MboII | GAAGA | 9 cut(s) | 188, 234, 401, 758, 821, 884, 1532, 1535, 1684 |
| MfeI | CAATTG | 3 cut(s) | 338, 1079, 1482 |
| MflI | RGATCY | 1 cut(s) | 664 |
| MhlI | GDGCHC | 3 cut(s) | 70, 759, 811 |
| MluI | ACGCGT | 1 cut(s) | 1296 |
| Mly113I | GGCGCC | 1 cut(s) | 582 |
| MlyI | GAGTC | 2 cut(s) | 544, 781 |
| MmeI | TCCRAC | 2 cut(s) | 784, 1591 |
| MroNI | GCCGGC | 1 cut(s) | 593 |
| MseI | TTAA | 2 cut(s) | 906, 1404 |
| MspA1I | CMGCKG | 4 cut(s) | 125, 251, 650, 1549 |
| MspI | CCGG | 7 cut(s) | 231, 524, 594, 608, 729, 791, 1699 |
| MunI | CAATTG | 3 cut(s) | 338, 1079, 1482 |
| Mva1269I | GAATGC | 1 cut(s) | 1331 |
| MvaI | CCWGG | 9 cut(s) | 83, 420, 462, 805, 937, 1064, 1417, 1593, 1660 |
| MvnI | CGCG | 7 cut(s) | 326, 708, 923, 1298, 1391, 1491, 1549 |
| NaeI | GCCGGC | 1 cut(s) | 595 |
| NarI | GGCGCC | 1 cut(s) | 582 |
| NciI | CCSGG | 3 cut(s) | 232, 729, 792 |
| NcoI | CCATGG | 1 cut(s) | 170 |
| NdeII | GATC | 7 cut(s) | 32, 196, 215, 429, 541, 586, 664 |
| NgoMIV | GCCGGC | 1 cut(s) | 593 |
| NlaIII | CATG | 4 cut(s) | 174, 638, 1112, 1401 |
| NmuCI | GTSAC | 2 cut(s) | 1090, 1654 |
| NruI | TCGCGA | 1 cut(s) | 326 |
| PagI | TCATGA | 1 cut(s) | 634 |
| PciSI | GCTCTTC | 2 cut(s) | 247, 1545 |
| PcsI | WCGNNNNNNNCGW | 3 cut(s) | 205, 330, 838 |
| PctI | GAATGC | 1 cut(s) | 1331 |
| PdiI | GCCGGC | 1 cut(s) | 595 |
| PfeI | GAWTC | 4 cut(s) | 889, 1042, 1115, 1324 |
| PfoI | TCCNGGA | 2 cut(s) | 727, 1062 |
| Ple19I | CGATCG | 1 cut(s) | 432 |
| PleI | GAGTC | 2 cut(s) | 543, 780 |
| PluTI | GGCGCC | 1 cut(s) | 585 |
| PpsI | GAGTC | 2 cut(s) | 543, 780 |
| PshBI | ATTAAT | 1 cut(s) | 906 |
| Psp6I | CCWGG | 9 cut(s) | 81, 418, 460, 803, 935, 1062, 1415, 1591, 1658 |
| PspGI | CCWGG | 9 cut(s) | 81, 418, 460, 803, 935, 1062, 1415, 1591, 1658 |
| PsuI | RGATCY | 1 cut(s) | 664 |
| PvuI | CGATCG | 1 cut(s) | 432 |
| RruI | TCGCGA | 1 cut(s) | 326 |
| RsaI | GTAC | 7 cut(s) | 414, 576, 711, 818, 969, 1372, 1703 |
| RsaNI | GTAC | 7 cut(s) | 413, 575, 710, 817, 968, 1371, 1702 |
| SacII | CCGCGG | 1 cut(s) | 1550 |
| SapI | GCTCTTC | 2 cut(s) | 247, 1545 |
| SaqAI | TTAA | 2 cut(s) | 906, 1404 |
| Sau3AI | GATC | 7 cut(s) | 32, 196, 215, 429, 541, 586, 664 |
| ScaI | AGTACT | 2 cut(s) | 818, 1372 |
| SchI | GAGTC | 2 cut(s) | 544, 781 |
| SduI | GDGCHC | 3 cut(s) | 70, 759, 811 |
| SfaNI | GCATC | 3 cut(s) | 13, 806, 1624 |
| SfoI | GGCGCC | 1 cut(s) | 583 |
| Sfr303I | CCGCGG | 1 cut(s) | 1550 |
| SgrBI | CCGCGG | 1 cut(s) | 1550 |
| SinI | GGWCC | 4 cut(s) | 154, 1053, 1469, 1564 |
| SmlI | CTYRAG | 2 cut(s) | 486, 1409 |
| SmoI | CTYRAG | 2 cut(s) | 486, 1409 |
| SspDI | GGCGCC | 1 cut(s) | 581 |
| SspMI | CTAG | 7 cut(s) | 662, 1103, 1124, 1136, 1166, 1218, 1328 |
| StyI | CCWWGG | 2 cut(s) | 170, 1273 |
| TaaI | ACNGT | 2 cut(s) | 928, 1087 |
| TaiI | ACGT | 5 cut(s) | 266, 336, 414, 766, 1448 |
| TaqI | TCGA | 4 cut(s) | 199, 214, 297, 1320 |
| TatI | WGTACW | 3 cut(s) | 816, 967, 1370 |
| TauI | GCSGC | 7 cut(s) | 125, 485, 530, 617, 659, 923, 1394 |
| TfiI | GAWTC | 4 cut(s) | 889, 1042, 1115, 1324 |
| Tru1I | TTAA | 2 cut(s) | 906, 1404 |
| Tru9I | TTAA | 2 cut(s) | 906, 1404 |
| TscAI | CASTG | 6 cut(s) | 66, 169, 360, 504, 675, 856 |
| TseFI | GTSAC | 2 cut(s) | 1090, 1654 |
| TseI | GCWGC | 8 cut(s) | 26, 125, 650, 653, 917, 1139, 1205, 1208 |
| Tsp45I | GTSAC | 2 cut(s) | 1090, 1654 |
| TspDTI | ATGAA | 5 cut(s) | 198, 924, 1235, 1303, 1386 |
| TspGWI | ACGGA | 4 cut(s) | 305, 916, 1461, 1528 |
| TspRI | CASTG | 6 cut(s) | 66, 169, 360, 504, 675, 856 |
| VpaK11BI | GGWCC | 4 cut(s) | 154, 1053, 1469, 1564 |
| VspI | ATTAAT | 1 cut(s) | 906 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1169 |
| XbaI | TCTAGA | 1 cut(s) | 661 |
| XmiI | GTMKAC | 2 cut(s) | 266, 1553 |
| XspI | CTAG | 7 cut(s) | 662, 1103, 1124, 1136, 1166, 1218, 1328 |
| ZraI | GACGTC | 1 cut(s) | 264 |
| ZrmI | AGTACT | 2 cut(s) | 818, 1372 |