Plant mobile domain
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 22 |
| Acc36I | ACCTGC | 3 cut(s) | 1162, 1255, 1761 |
| AccB1I | GGYRCC | 2 cut(s) | 415, 1133 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 815 |
| AccBSI | CCGCTC | 1 cut(s) | 963 |
| AccIII | TCCGGA | 2 cut(s) | 727, 1219 |
| AclWI | GGATC | 6 cut(s) | 49, 62, 269, 347, 1271, 1376 |
| AcoI | YGGCCR | 3 cut(s) | 108, 817, 850 |
| AcuI | CTGAAG | 4 cut(s) | 582, 909, 915, 1781 |
| AcyI | GRCGYC | 2 cut(s) | 435, 546 |
| AfaI | GTAC | 1 cut(s) | 191 |
| AfeI | AGCGCT | 1 cut(s) | 1272 |
| AfiI | CCNNNNNNNGG | 8 cut(s) | 757, 796, 797, 815, 848, 1130, 1462, 1747 |
| AflIII | ACRYGT | 1 cut(s) | 21 |
| AgsI | TTSAA | 5 cut(s) | 254, 448, 1301, 1442, 1790 |
| AjnI | CCWGG | 3 cut(s) | 195, 268, 437 |
| Alw21I | GWGCWC | 2 cut(s) | 594, 879 |
| Alw26I | GTCTC | 4 cut(s) | 8, 569, 1694, 1908 |
| AlwI | GGATC | 6 cut(s) | 49, 62, 269, 347, 1271, 1376 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 887 |
| Ama87I | CYCGRG | 2 cut(s) | 1193, 1511 |
| Aor13HI | TCCGGA | 2 cut(s) | 727, 1219 |
| Aor51HI | AGCGCT | 1 cut(s) | 1272 |
| AoxI | GGCC | 8 cut(s) | 28, 108, 759, 817, 850, 1800, 1821, 1842 |
| ApeKI | GCWGC | 6 cut(s) | 935, 938, 957, 1061, 1211, 1247 |
| AseI | ATTAAT | 1 cut(s) | 1632 |
| AspS9I | GGNCC | 8 cut(s) | 29, 760, 967, 1750, 1779, 1801, 1822, 1843 |
| AsuC2I | CCSGG | 1 cut(s) | 758 |
| AsuHPI | GGTGA | 3 cut(s) | 1182, 1582, 1849 |
| AsuII | TTCGAA | 1 cut(s) | 1893 |
| AvaI | CYCGRG | 2 cut(s) | 1193, 1511 |
| AvaII | GGWCC | 3 cut(s) | 967, 1750, 1779 |
| BamHI | GGATCC | 1 cut(s) | 54 |
| BanI | GGYRCC | 2 cut(s) | 415, 1133 |
| BanII | GRGCYC | 5 cut(s) | 474, 486, 535, 594, 751 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1015, 1047 |
| BbsI | GAAGAC | 1 cut(s) | 1023 |
| Bbv12I | GWGCWC | 2 cut(s) | 594, 879 |
| BbvCI | CCTCAGC | 4 cut(s) | 348, 653, 1362, 1866 |
| BbvI | GCAGC | 6 cut(s) | 925, 947, 969, 1048, 1223, 1234 |
| BccI | CCATC | 6 cut(s) | 123, 250, 548, 1237, 1405, 1543 |
| BceAI | ACGGC | 4 cut(s) | 66, 533, 807, 1857 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 353, 387, 1150, 1184 |
| BciT130I | CCWGG | 3 cut(s) | 197, 270, 439 |
| BciVI | GTATCC | 1 cut(s) | 563 |
| BcnI | CCSGG | 1 cut(s) | 758 |
| BcoDI | GTCTC | 4 cut(s) | 8, 569, 1694, 1908 |
| BfaI | CTAG | 5 cut(s) | 302, 1065, 1394, 1662, 1871 |
| BfmI | CTRYAG | 1 cut(s) | 1754 |
| BfoI | RGCGCY | 1 cut(s) | 1274 |
| BfuAI | ACCTGC | 3 cut(s) | 1162, 1255, 1761 |
| BfuI | GTATCC | 1 cut(s) | 563 |
| Bme1390I | CCNGG | 4 cut(s) | 197, 270, 439, 758 |
| Bme18I | GGWCC | 3 cut(s) | 967, 1750, 1779 |
| BmeT110I | CYCGRG | 2 cut(s) | 1193, 1511 |
| BmgT120I | GGNCC | 8 cut(s) | 29, 760, 967, 1750, 1779, 1801, 1822, 1843 |
| BmrFI | CCNGG | 4 cut(s) | 197, 270, 439, 758 |
| BmrI | ACTGGG | 1 cut(s) | 1819 |
| BmsI | GCATC | 6 cut(s) | 13, 672, 1213, 1471, 1483, 1718 |
| BmuI | ACTGGG | 1 cut(s) | 1819 |
| BpiI | GAAGAC | 1 cut(s) | 1023 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 461, 493, 1725, 1757 |
| BpmI | CTGGAG | 1 cut(s) | 777 |
| Bpu10I | CCTNAGC | 5 cut(s) | 348, 653, 1362, 1866, 1917 |
| Bpu14I | TTCGAA | 1 cut(s) | 1893 |
| BpuEI | CTTGAG | 3 cut(s) | 1401, 1431, 1871 |
| BpuMI | CCSGG | 1 cut(s) | 758 |
| Bsa29I | ATCGAT | 1 cut(s) | 1012 |
| BsaBI | GATNNNNATC | 2 cut(s) | 241, 1319 |
| BsaHI | GRCGYC | 2 cut(s) | 435, 546 |
| BsaI | GGTCTC | 2 cut(s) | 8, 1694 |
| BsaJI | CCNNGG | 3 cut(s) | 549, 983, 1101 |
| BsaWI | WCCGGW | 3 cut(s) | 727, 1219, 1336 |
| Bsc4I | CCNNNNNNNGG | 8 cut(s) | 757, 796, 797, 815, 848, 1130, 1462, 1747 |
| Bse118I | RCCGGY | 5 cut(s) | 106, 739, 848, 1026, 1130 |
| Bse1I | ACTGG | 2 cut(s) | 394, 1825 |
| Bse3DI | GCAATG | 1 cut(s) | 1905 |
| Bse8I | GATNNNNATC | 2 cut(s) | 241, 1319 |
| BseAI | TCCGGA | 2 cut(s) | 727, 1219 |
| BseBI | CCWGG | 3 cut(s) | 197, 270, 439 |
| BseCI | ATCGAT | 1 cut(s) | 1012 |
| BseDI | CCNNGG | 3 cut(s) | 549, 983, 1101 |
| BseGI | GGATG | 7 cut(s) | 4, 90, 155, 205, 709, 1228, 1416 |
| BseJI | GATNNNNATC | 2 cut(s) | 241, 1319 |
| BseLI | CCNNNNNNNGG | 8 cut(s) | 757, 796, 797, 815, 848, 1130, 1462, 1747 |
| BseMI | GCAATG | 1 cut(s) | 1905 |
| BseNI | ACTGG | 2 cut(s) | 394, 1825 |
| BsePI | GCGCGC | 1 cut(s) | 1922 |
| BseRI | GAGGAG | 1 cut(s) | 1250 |
| BseX3I | CGGCCG | 1 cut(s) | 108 |
| BseXI | GCAGC | 6 cut(s) | 925, 947, 969, 1048, 1223, 1234 |
| BseYI | CCCAGC | 4 cut(s) | 717, 841, 1043, 1845 |
| BsgI | GTGCAG | 4 cut(s) | 1190, 1230, 1233, 1293 |
| Bsh1285I | CGRYCG | 4 cut(s) | 111, 292, 1341, 1647 |
| BshFI | GGCC | 8 cut(s) | 30, 110, 761, 819, 852, 1802, 1823, 1844 |
| BshNI | GGYRCC | 2 cut(s) | 415, 1133 |
| BshVI | ATCGAT | 1 cut(s) | 1012 |
| BsiEI | CGRYCG | 4 cut(s) | 111, 292, 1341, 1647 |
| BsiHKAI | GWGCWC | 2 cut(s) | 594, 879 |
| BsiHKCI | CYCGRG | 2 cut(s) | 1193, 1511 |
| BslFI | GGGAC | 1 cut(s) | 1763 |
| BslI | CCNNNNNNNGG | 8 cut(s) | 757, 796, 797, 815, 848, 1130, 1462, 1747 |
| BsmAI | GTCTC | 4 cut(s) | 8, 569, 1694, 1908 |
| BsmFI | GGGAC | 1 cut(s) | 1763 |
| BsmI | GAATGC | 1 cut(s) | 1150 |
| BsnI | GGCC | 8 cut(s) | 30, 110, 761, 819, 852, 1802, 1823, 1844 |
| Bso31I | GGTCTC | 2 cut(s) | 8, 1694 |
| BsoBI | CYCGRG | 2 cut(s) | 1193, 1511 |
| Bsp119I | TTCGAA | 1 cut(s) | 1893 |
| Bsp1286I | GDGCHC | 6 cut(s) | 474, 486, 535, 594, 751, 879 |
| Bsp13I | TCCGGA | 2 cut(s) | 727, 1219 |
| Bsp143I | GATC | 8 cut(s) | 54, 112, 274, 339, 517, 1009, 1276, 1381 |
| Bsp19I | CCATGG | 1 cut(s) | 983 |
| Bsp68I | TCGCGA | 2 cut(s) | 783, 1716 |
| BspANI | GGCC | 8 cut(s) | 30, 110, 761, 819, 852, 1802, 1823, 1844 |
| BspDI | ATCGAT | 1 cut(s) | 1012 |
| BspEI | TCCGGA | 2 cut(s) | 727, 1219 |
| BspMAI | CTGCAG | 1 cut(s) | 1758 |
| BspMI | ACCTGC | 3 cut(s) | 1162, 1255, 1761 |
| BspPI | GGATC | 6 cut(s) | 49, 62, 269, 347, 1271, 1376 |
| BspQI | GCTCTTC | 2 cut(s) | 582, 1060 |
| BspT104I | TTCGAA | 1 cut(s) | 1893 |
| BspT107I | GGYRCC | 2 cut(s) | 415, 1133 |
| BspTNI | GGTCTC | 2 cut(s) | 8, 1694 |
| BsrBI | CCGCTC | 1 cut(s) | 963 |
| BsrDI | GCAATG | 1 cut(s) | 1905 |
| BsrFI | RCCGGY | 5 cut(s) | 106, 739, 848, 1026, 1130 |
| BsrI | ACTGG | 2 cut(s) | 394, 1825 |
| BssAI | RCCGGY | 5 cut(s) | 106, 739, 848, 1026, 1130 |
| BssECI | CCNNGG | 3 cut(s) | 549, 983, 1101 |
| BssHII | GCGCGC | 1 cut(s) | 1922 |
| BssMI | GATC | 8 cut(s) | 54, 112, 274, 339, 517, 1009, 1276, 1381 |
| BssNI | GRCGYC | 2 cut(s) | 435, 546 |
| BssT1I | CCWWGG | 1 cut(s) | 983 |
| Bst2UI | CCWGG | 3 cut(s) | 197, 270, 439 |
| Bst4CI | ACNGT | 1 cut(s) | 931 |
| Bst6I | CTCTTC | 4 cut(s) | 582, 647, 729, 1060 |
| BstACI | GRCGYC | 2 cut(s) | 435, 546 |
| BstBI | TTCGAA | 1 cut(s) | 1893 |
| BstDSI | CCRYGG | 3 cut(s) | 549, 983, 1101 |
| BstF5I | GGATG | 7 cut(s) | 4, 90, 155, 205, 709, 1228, 1416 |
| BstH2I | RGCGCY | 1 cut(s) | 1274 |
| BstKTI | GATC | 8 cut(s) | 57, 115, 277, 342, 520, 1012, 1279, 1384 |
| BstMAI | GTCTC | 4 cut(s) | 8, 569, 1694, 1908 |
| BstMBI | GATC | 8 cut(s) | 54, 112, 274, 339, 517, 1009, 1276, 1381 |
| BstMCI | CGRYCG | 4 cut(s) | 111, 292, 1341, 1647 |
| BstNI | CCWGG | 3 cut(s) | 197, 270, 439 |
| BstNSI | RCATGY | 2 cut(s) | 25, 1043 |
| BstSCI | CCNGG | 4 cut(s) | 195, 268, 437, 756 |
| BstSFI | CTRYAG | 1 cut(s) | 1754 |
| BstV1I | GCAGC | 6 cut(s) | 925, 947, 969, 1048, 1223, 1234 |
| BstV2I | GAAGAC | 1 cut(s) | 1023 |
| BstX2I | RGATCY | 1 cut(s) | 54 |
| BstYI | RGATCY | 1 cut(s) | 54 |
| BstZI | CGGCCG | 1 cut(s) | 108 |
| Bsu15I | ATCGAT | 1 cut(s) | 1012 |
| BsuI | GTATCC | 1 cut(s) | 563 |
| BsuRI | GGCC | 8 cut(s) | 30, 110, 761, 819, 852, 1802, 1823, 1844 |
| BsuTUI | ATCGAT | 1 cut(s) | 1012 |
| BtgI | CCRYGG | 3 cut(s) | 549, 983, 1101 |
| BtgZI | GCGATG | 1 cut(s) | 1158 |
| BtsCI | GGATG | 7 cut(s) | 4, 90, 155, 205, 709, 1228, 1416 |
| BtsIMutI | CAGTG | 2 cut(s) | 975, 1575 |
| BtuMI | TCGCGA | 2 cut(s) | 783, 1716 |
| BveI | ACCTGC | 3 cut(s) | 1162, 1255, 1761 |
| CaiI | CAGNNNCTG | 1 cut(s) | 887 |
| Cfr10I | RCCGGY | 5 cut(s) | 106, 739, 848, 1026, 1130 |
| Cfr13I | GGNCC | 8 cut(s) | 29, 760, 967, 1750, 1779, 1801, 1822, 1843 |
| ClaI | ATCGAT | 1 cut(s) | 1012 |
| CseI | GACGC | 2 cut(s) | 443, 554 |
| Csp6I | GTAC | 1 cut(s) | 190 |
| CviAII | CATG | 4 cut(s) | 22, 984, 1040, 1433 |
| CviQI | GTAC | 1 cut(s) | 190 |
| DpnI | GATC | 8 cut(s) | 56, 114, 276, 341, 519, 1011, 1278, 1383 |
| DpnII | GATC | 8 cut(s) | 54, 112, 274, 339, 517, 1009, 1276, 1381 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 22 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 22 |
| EaeI | YGGCCR | 3 cut(s) | 108, 817, 850 |
| EagI | CGGCCG | 1 cut(s) | 108 |
| Eam1104I | CTCTTC | 4 cut(s) | 582, 647, 729, 1060 |
| EarI | CTCTTC | 4 cut(s) | 582, 647, 729, 1060 |
| EciI | GGCGGA | 1 cut(s) | 68 |
| Ecl136II | GAGCTC | 1 cut(s) | 592 |
| EclXI | CGGCCG | 1 cut(s) | 108 |
| Eco130I | CCWWGG | 1 cut(s) | 983 |
| Eco24I | GRGCYC | 5 cut(s) | 474, 486, 535, 594, 751 |
| Eco31I | GGTCTC | 2 cut(s) | 8, 1694 |
| Eco32I | GATATC | 1 cut(s) | 1317 |
| Eco47I | GGWCC | 3 cut(s) | 967, 1750, 1779 |
| Eco47III | AGCGCT | 1 cut(s) | 1272 |
| Eco52I | CGGCCG | 1 cut(s) | 108 |
| Eco53kI | GAGCTC | 1 cut(s) | 592 |
| Eco57I | CTGAAG | 4 cut(s) | 582, 909, 915, 1781 |
| Eco88I | CYCGRG | 2 cut(s) | 1193, 1511 |
| EcoICRI | GAGCTC | 1 cut(s) | 592 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1750 |
| EcoRII | CCWGG | 3 cut(s) | 195, 268, 437 |
| EcoRV | GATATC | 1 cut(s) | 1317 |
| EcoT14I | CCWWGG | 1 cut(s) | 983 |
| EcoT22I | ATGCAT | 1 cut(s) | 6 |
| EcoT38I | GRGCYC | 5 cut(s) | 474, 486, 535, 594, 751 |
| ErhI | CCWWGG | 1 cut(s) | 983 |
| FaeI | CATG | 4 cut(s) | 25, 987, 1043, 1436 |
| FaqI | GGGAC | 1 cut(s) | 1763 |
| FatI | CATG | 4 cut(s) | 21, 983, 1039, 1432 |
| FauI | CCCGC | 3 cut(s) | 102, 398, 1515 |
| FokI | GGATG | 6 cut(s) | 77, 142, 212, 716, 1235, 1423 |
| FriOI | GRGCYC | 5 cut(s) | 474, 486, 535, 594, 751 |
| FspBI | CTAG | 5 cut(s) | 302, 1065, 1394, 1662, 1871 |
| GsaI | CCCAGC | 4 cut(s) | 721, 845, 1047, 1849 |
| GsuI | CTGGAG | 1 cut(s) | 777 |
| HaeII | RGCGCY | 1 cut(s) | 1274 |
| HaeIII | GGCC | 8 cut(s) | 30, 110, 761, 819, 852, 1802, 1823, 1844 |
| HgaI | GACGC | 2 cut(s) | 443, 554 |
| Hin1I | GRCGYC | 2 cut(s) | 435, 546 |
| Hin1II | CATG | 4 cut(s) | 25, 987, 1043, 1436 |
| HincII | GTYRAC | 1 cut(s) | 1830 |
| HindII | GTYRAC | 1 cut(s) | 1830 |
| HinfI | GANTC | 6 cut(s) | 237, 610, 899, 1106, 1162, 1718 |
| HphI | GGTGA | 3 cut(s) | 1182, 1582, 1849 |
| Hpy166II | GTNNAC | 5 cut(s) | 553, 1190, 1565, 1590, 1830 |
| Hpy8I | GTNNAC | 5 cut(s) | 553, 1190, 1565, 1590, 1830 |
| Hpy99I | CGWCG | 3 cut(s) | 437, 548, 1563 |
| HpyAV | CCTTC | 5 cut(s) | 560, 1043, 1226, 1784, 1900 |
| HpyCH4III | ACNGT | 1 cut(s) | 931 |
| Hsp92I | GRCGYC | 2 cut(s) | 435, 546 |
| Hsp92II | CATG | 4 cut(s) | 25, 987, 1043, 1436 |
| Kpn2I | TCCGGA | 2 cut(s) | 727, 1219 |
| KroI | GCCGGC | 2 cut(s) | 848, 1130 |
| KroNI | GCCGGC | 2 cut(s) | 850, 1132 |
| Kzo9I | GATC | 8 cut(s) | 54, 112, 274, 339, 517, 1009, 1276, 1381 |
| LguI | GCTCTTC | 2 cut(s) | 582, 1060 |
| LmnI | GCTCC | 4 cut(s) | 379, 1237, 1360, 1507 |
| Lsp1109I | GCAGC | 6 cut(s) | 925, 947, 969, 1048, 1223, 1234 |
| LweI | GCATC | 6 cut(s) | 13, 672, 1213, 1471, 1483, 1718 |
| MaeI | CTAG | 5 cut(s) | 302, 1065, 1394, 1662, 1871 |
| MaeIII | GTNAC | 2 cut(s) | 1608, 1837 |
| MalI | GATC | 8 cut(s) | 56, 114, 276, 341, 519, 1011, 1278, 1383 |
| MbiI | CCGCTC | 1 cut(s) | 963 |
| MboI | GATC | 8 cut(s) | 54, 112, 274, 339, 517, 1009, 1276, 1381 |
| MfeI | CAATTG | 3 cut(s) | 410, 601, 1805 |
| MflI | RGATCY | 1 cut(s) | 54 |
| MhlI | GDGCHC | 6 cut(s) | 474, 486, 535, 594, 751, 879 |
| MluCI | AATT | 6 cut(s) | 222, 318, 410, 601, 777, 1805 |
| MlyI | GAGTC | 2 cut(s) | 604, 1712 |
| Mph1103I | ATGCAT | 1 cut(s) | 6 |
| MroI | TCCGGA | 2 cut(s) | 727, 1219 |
| MroNI | GCCGGC | 2 cut(s) | 848, 1130 |
| MseI | TTAA | 1 cut(s) | 1632 |
| MslI | CAYNNNNRTG | 1 cut(s) | 680 |
| MspA1I | CMGCKG | 3 cut(s) | 347, 938, 1835 |
| MspR9I | CCNGG | 4 cut(s) | 197, 270, 439, 758 |
| MunI | CAATTG | 3 cut(s) | 410, 601, 1805 |
| Mva1269I | GAATGC | 1 cut(s) | 1150 |
| MvaI | CCWGG | 3 cut(s) | 197, 270, 439 |
| NaeI | GCCGGC | 2 cut(s) | 850, 1132 |
| NciI | CCSGG | 1 cut(s) | 758 |
| NcoI | CCATGG | 1 cut(s) | 983 |
| NdeII | GATC | 8 cut(s) | 54, 112, 274, 339, 517, 1009, 1276, 1381 |
| NgoMIV | GCCGGC | 2 cut(s) | 848, 1130 |
| NlaIII | CATG | 4 cut(s) | 25, 987, 1043, 1436 |
| NmuCI | GTSAC | 1 cut(s) | 1837 |
| NruI | TCGCGA | 2 cut(s) | 783, 1716 |
| NsiI | ATGCAT | 1 cut(s) | 6 |
| NspI | RCATGY | 2 cut(s) | 25, 1043 |
| NspV | TTCGAA | 1 cut(s) | 1893 |
| PaeI | GCATGC | 1 cut(s) | 1043 |
| PauI | GCGCGC | 1 cut(s) | 1922 |
| PciI | ACATGT | 1 cut(s) | 21 |
| PciSI | GCTCTTC | 2 cut(s) | 582, 1060 |
| PcsI | WCGNNNNNNNCGW | 3 cut(s) | 1018, 1564, 1590 |
| PctI | GAATGC | 1 cut(s) | 1150 |
| PdiI | GCCGGC | 2 cut(s) | 850, 1132 |
| PfeI | GAWTC | 4 cut(s) | 237, 899, 1106, 1162 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 815 |
| PfoI | TCCNGGA | 1 cut(s) | 195 |
| PleI | GAGTC | 2 cut(s) | 604, 1712 |
| PpsI | GAGTC | 2 cut(s) | 604, 1712 |
| PpuMI | RGGWCCY | 1 cut(s) | 1750 |
| PscI | ACATGT | 1 cut(s) | 21 |
| PshBI | ATTAAT | 1 cut(s) | 1632 |
| Psp124BI | GAGCTC | 1 cut(s) | 594 |
| Psp5II | RGGWCCY | 1 cut(s) | 1750 |
| Psp6I | CCWGG | 3 cut(s) | 195, 268, 437 |
| PspFI | CCCAGC | 4 cut(s) | 717, 841, 1043, 1845 |
| PspGI | CCWGG | 3 cut(s) | 195, 268, 437 |
| PspPI | GGNCC | 8 cut(s) | 29, 760, 967, 1750, 1779, 1801, 1822, 1843 |
| PspPPI | RGGWCCY | 1 cut(s) | 1750 |
| PstI | CTGCAG | 1 cut(s) | 1758 |
| PstNI | CAGNNNCTG | 1 cut(s) | 887 |
| PsuI | RGATCY | 1 cut(s) | 54 |
| PteI | GCGCGC | 1 cut(s) | 1922 |
| PvuII | CAGCTG | 1 cut(s) | 938 |
| RruI | TCGCGA | 2 cut(s) | 783, 1716 |
| RsaI | GTAC | 1 cut(s) | 191 |
| RsaNI | GTAC | 1 cut(s) | 190 |
| RseI | CAYNNNNRTG | 1 cut(s) | 680 |
| SacI | GAGCTC | 1 cut(s) | 594 |
| SapI | GCTCTTC | 2 cut(s) | 582, 1060 |
| SaqAI | TTAA | 1 cut(s) | 1632 |
| Sau3AI | GATC | 8 cut(s) | 54, 112, 274, 339, 517, 1009, 1276, 1381 |
| Sau96I | GGNCC | 8 cut(s) | 29, 760, 967, 1750, 1779, 1801, 1822, 1843 |
| SchI | GAGTC | 2 cut(s) | 604, 1712 |
| ScrFI | CCNGG | 4 cut(s) | 197, 270, 439, 758 |
| SduI | GDGCHC | 6 cut(s) | 474, 486, 535, 594, 751, 879 |
| SfaNI | GCATC | 6 cut(s) | 13, 672, 1213, 1471, 1483, 1718 |
| SfcI | CTRYAG | 1 cut(s) | 1754 |
| SfuI | TTCGAA | 1 cut(s) | 1893 |
| SinI | GGWCC | 3 cut(s) | 967, 1750, 1779 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 680 |
| SmlI | CTYRAG | 3 cut(s) | 1416, 1446, 1850 |
| SmoI | CTYRAG | 3 cut(s) | 1416, 1446, 1850 |
| SphI | GCATGC | 1 cut(s) | 1043 |
| Sse9I | AATT | 6 cut(s) | 222, 318, 410, 601, 777, 1805 |
| SspI | AATATT | 1 cut(s) | 1544 |
| SspMI | CTAG | 5 cut(s) | 302, 1065, 1394, 1662, 1871 |
| SstI | GAGCTC | 1 cut(s) | 594 |
| StyD4I | CCNGG | 4 cut(s) | 195, 268, 437, 756 |
| StyI | CCWWGG | 1 cut(s) | 983 |
| TaaI | ACNGT | 1 cut(s) | 931 |
| TaqI | TCGA | 8 cut(s) | 127, 543, 1012, 1160, 1584, 1684, 1812, 1893 |
| TaqII | GACCGA | 1 cut(s) | 389 |
| TasI | AATT | 6 cut(s) | 222, 318, 410, 601, 777, 1805 |
| TauI | GCSGC | 5 cut(s) | 141, 347, 822, 848, 963 |
| TfiI | GAWTC | 4 cut(s) | 237, 899, 1106, 1162 |
| Tru1I | TTAA | 1 cut(s) | 1632 |
| Tru9I | TTAA | 1 cut(s) | 1632 |
| TscAI | CASTG | 2 cut(s) | 982, 1582 |
| TseFI | GTSAC | 1 cut(s) | 1837 |
| TseI | GCWGC | 6 cut(s) | 935, 938, 957, 1061, 1211, 1247 |
| Tsp45I | GTSAC | 1 cut(s) | 1837 |
| TspDTI | ATGAA | 4 cut(s) | 144, 639, 1011, 1650 |
| TspGWI | ACGGA | 2 cut(s) | 570, 1118 |
| TspRI | CASTG | 2 cut(s) | 982, 1582 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 815 |
| VpaK11BI | GGWCC | 3 cut(s) | 967, 1750, 1779 |
| VspI | ATTAAT | 1 cut(s) | 1632 |
| XceI | RCATGY | 2 cut(s) | 25, 1043 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 547 |
| XspI | CTAG | 5 cut(s) | 302, 1065, 1394, 1662, 1871 |
| Zsp2I | ATGCAT | 1 cut(s) | 6 |