Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 82 |
| AccBSI | CCGCTC | 1 cut(s) | 153 |
| AccII | CGCG | 5 cut(s) | 53, 60, 66, 134, 360 |
| AciI | CCGC | 5 cut(s) | 60, 134, 137, 151, 358 |
| AcoI | YGGCCR | 1 cut(s) | 13 |
| AcsI | RAATTY | 1 cut(s) | 205 |
| AfaI | GTAC | 1 cut(s) | 471 |
| AgsI | TTSAA | 1 cut(s) | 204 |
| AjnI | CCWGG | 1 cut(s) | 413 |
| AluBI | AGCT | 1 cut(s) | 76 |
| AluI | AGCT | 1 cut(s) | 76 |
| Alw21I | GWGCWC | 1 cut(s) | 389 |
| Alw26I | GTCTC | 1 cut(s) | 31 |
| AoxI | GGCC | 2 cut(s) | 13, 320 |
| ApeKI | GCWGC | 3 cut(s) | 88, 157, 335 |
| ApoI | RAATTY | 1 cut(s) | 205 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 190, 222 |
| AspLEI | GCGC | 3 cut(s) | 66, 134, 340 |
| AspS9I | GGNCC | 1 cut(s) | 321 |
| AsuC2I | CCSGG | 1 cut(s) | 382 |
| AsuHPI | GGTGA | 2 cut(s) | 240, 300 |
| Bbv12I | GWGCWC | 1 cut(s) | 389 |
| BbvI | GCAGC | 3 cut(s) | 100, 144, 347 |
| BccI | CCATC | 4 cut(s) | 31, 131, 253, 356 |
| BciT130I | CCWGG | 1 cut(s) | 415 |
| BcnI | CCSGG | 1 cut(s) | 382 |
| BcoDI | GTCTC | 1 cut(s) | 31 |
| BfaI | CTAG | 1 cut(s) | 73 |
| BfoI | RGCGCY | 1 cut(s) | 341 |
| BfuAI | ACCTGC | 1 cut(s) | 82 |
| BglII | AGATCT | 1 cut(s) | 69 |
| BisI | GCNGC | 6 cut(s) | 89, 135, 138, 151, 158, 336 |
| BlsI | GCNGC | 6 cut(s) | 90, 136, 139, 152, 159, 337 |
| Bme1390I | CCNGG | 2 cut(s) | 382, 415 |
| BmgT120I | GGNCC | 1 cut(s) | 321 |
| BmiI | GGNNCC | 1 cut(s) | 351 |
| BmrFI | CCNGG | 2 cut(s) | 382, 415 |
| BpmI | CTGGAG | 1 cut(s) | 436 |
| BpuMI | CCSGG | 1 cut(s) | 382 |
| BsaJI | CCNNGG | 1 cut(s) | 317 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 334, 364 |
| Bse118I | RCCGGY | 2 cut(s) | 250, 397 |
| Bse1I | ACTGG | 1 cut(s) | 471 |
| Bse3DI | GCAATG | 2 cut(s) | 147, 260 |
| BseBI | CCWGG | 1 cut(s) | 415 |
| BseDI | CCNNGG | 1 cut(s) | 317 |
| BseMI | GCAATG | 2 cut(s) | 147, 260 |
| BseNI | ACTGG | 1 cut(s) | 471 |
| BseRI | GAGGAG | 1 cut(s) | 441 |
| BseXI | GCAGC | 3 cut(s) | 100, 144, 347 |
| BseYI | CCCAGC | 1 cut(s) | 323 |
| BsgI | GTGCAG | 1 cut(s) | 429 |
| Bsh1236I | CGCG | 5 cut(s) | 53, 60, 66, 134, 360 |
| Bsh1285I | CGRYCG | 2 cut(s) | 333, 398 |
| BshFI | GGCC | 2 cut(s) | 15, 322 |
| BsiEI | CGRYCG | 2 cut(s) | 333, 398 |
| BsiHKAI | GWGCWC | 1 cut(s) | 389 |
| BsiSI | CCGG | 3 cut(s) | 251, 381, 398 |
| BsmAI | GTCTC | 1 cut(s) | 31 |
| BsmI | GAATGC | 1 cut(s) | 90 |
| BsnI | GGCC | 2 cut(s) | 15, 322 |
| Bsp1286I | GDGCHC | 1 cut(s) | 389 |
| Bsp143I | GATC | 2 cut(s) | 69, 111 |
| Bsp19I | CCATGG | 1 cut(s) | 317 |
| Bsp68I | TCGCGA | 1 cut(s) | 53 |
| BspACI | CCGC | 5 cut(s) | 60, 134, 137, 151, 358 |
| BspANI | GGCC | 2 cut(s) | 15, 322 |
| BspFNI | CGCG | 5 cut(s) | 53, 60, 66, 134, 360 |
| BspLI | GGNNCC | 1 cut(s) | 351 |
| BspMI | ACCTGC | 1 cut(s) | 82 |
| BsrBI | CCGCTC | 1 cut(s) | 153 |
| BsrDI | GCAATG | 2 cut(s) | 147, 260 |
| BsrFI | RCCGGY | 2 cut(s) | 250, 397 |
| BsrI | ACTGG | 1 cut(s) | 471 |
| BssAI | RCCGGY | 2 cut(s) | 250, 397 |
| BssECI | CCNNGG | 1 cut(s) | 317 |
| BssMI | GATC | 2 cut(s) | 69, 111 |
| BssT1I | CCWWGG | 1 cut(s) | 317 |
| Bst2UI | CCWGG | 1 cut(s) | 415 |
| Bst4CI | ACNGT | 2 cut(s) | 331, 346 |
| BstC8I | GCNNGC | 5 cut(s) | 62, 78, 155, 256, 267 |
| BstDEI | CTNAG | 1 cut(s) | 473 |
| BstDSI | CCRYGG | 1 cut(s) | 317 |
| BstFNI | CGCG | 5 cut(s) | 53, 60, 66, 134, 360 |
| BstH2I | RGCGCY | 1 cut(s) | 341 |
| BstHHI | GCGC | 3 cut(s) | 66, 134, 340 |
| BstKTI | GATC | 2 cut(s) | 72, 114 |
| BstMAI | GTCTC | 1 cut(s) | 31 |
| BstMBI | GATC | 2 cut(s) | 69, 111 |
| BstMCI | CGRYCG | 2 cut(s) | 333, 398 |
| BstNI | CCWGG | 1 cut(s) | 415 |
| BstSCI | CCNGG | 2 cut(s) | 380, 413 |
| BstUI | CGCG | 5 cut(s) | 53, 60, 66, 134, 360 |
| BstV1I | GCAGC | 3 cut(s) | 100, 144, 347 |
| BstX2I | RGATCY | 1 cut(s) | 69 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 195 |
| BstYI | RGATCY | 1 cut(s) | 69 |
| BsuRI | GGCC | 2 cut(s) | 15, 322 |
| BtgI | CCRYGG | 1 cut(s) | 317 |
| BtgZI | GCGATG | 1 cut(s) | 375 |
| BtsIMutI | CAGTG | 2 cut(s) | 351, 464 |
| BtuMI | TCGCGA | 1 cut(s) | 53 |
| BveI | ACCTGC | 1 cut(s) | 82 |
| Cac8I | GCNNGC | 5 cut(s) | 62, 78, 155, 256, 267 |
| CfoI | GCGC | 3 cut(s) | 66, 134, 340 |
| Cfr10I | RCCGGY | 2 cut(s) | 250, 397 |
| Cfr13I | GGNCC | 1 cut(s) | 321 |
| Csp6I | GTAC | 1 cut(s) | 470 |
| CviAII | CATG | 3 cut(s) | 99, 283, 318 |
| CviJI | RGCY | 8 cut(s) | 15, 76, 254, 322, 350, 380, 426, 462 |
| CviKI_1 | RGCY | 8 cut(s) | 15, 76, 254, 322, 350, 380, 426, 462 |
| CviQI | GTAC | 1 cut(s) | 470 |
| DdeI | CTNAG | 1 cut(s) | 473 |
| DpnI | GATC | 2 cut(s) | 71, 113 |
| DpnII | GATC | 2 cut(s) | 69, 111 |
| EaeI | YGGCCR | 1 cut(s) | 13 |
| Eco130I | CCWWGG | 1 cut(s) | 317 |
| EcoRII | CCWGG | 1 cut(s) | 413 |
| EcoT14I | CCWWGG | 1 cut(s) | 317 |
| EcoT22I | ATGCAT | 1 cut(s) | 104 |
| ErhI | CCWWGG | 1 cut(s) | 317 |
| FaeI | CATG | 3 cut(s) | 102, 286, 321 |
| FaiI | YATR | 7 cut(s) | 100, 104, 117, 284, 319, 372, 439 |
| FatI | CATG | 3 cut(s) | 98, 282, 317 |
| FauI | CCCGC | 2 cut(s) | 53, 365 |
| Fnu4HI | GCNGC | 6 cut(s) | 89, 135, 138, 151, 158, 336 |
| Fsp4HI | GCNGC | 6 cut(s) | 89, 135, 138, 151, 158, 336 |
| FspBI | CTAG | 1 cut(s) | 73 |
| GlaI | GCGC | 3 cut(s) | 65, 133, 339 |
| GluI | GCNGC | 6 cut(s) | 89, 135, 138, 151, 158, 336 |
| GsaI | CCCAGC | 1 cut(s) | 327 |
| GsuI | CTGGAG | 1 cut(s) | 436 |
| HaeII | RGCGCY | 1 cut(s) | 341 |
| HaeIII | GGCC | 2 cut(s) | 15, 322 |
| HapII | CCGG | 3 cut(s) | 251, 381, 398 |
| HhaI | GCGC | 3 cut(s) | 66, 134, 340 |
| Hin1II | CATG | 3 cut(s) | 102, 286, 321 |
| Hin6I | GCGC | 3 cut(s) | 64, 132, 338 |
| HinP1I | GCGC | 3 cut(s) | 64, 132, 338 |
| HincII | GTYRAC | 1 cut(s) | 303 |
| HindII | GTYRAC | 1 cut(s) | 303 |
| HinfI | GANTC | 2 cut(s) | 295, 404 |
| HpaII | CCGG | 3 cut(s) | 251, 381, 398 |
| HphI | GGTGA | 2 cut(s) | 240, 300 |
| Hpy166II | GTNNAC | 1 cut(s) | 303 |
| Hpy188III | TCNNGA | 2 cut(s) | 52, 174 |
| Hpy8I | GTNNAC | 1 cut(s) | 303 |
| HpyCH4III | ACNGT | 2 cut(s) | 331, 346 |
| HpyCH4V | TGCA | 5 cut(s) | 88, 102, 282, 431, 446 |
| HpyF3I | CTNAG | 1 cut(s) | 473 |
| Hsp92II | CATG | 3 cut(s) | 102, 286, 321 |
| HspAI | GCGC | 3 cut(s) | 64, 132, 338 |
| Kzo9I | GATC | 2 cut(s) | 69, 111 |
| LmnI | GCTCC | 2 cut(s) | 355, 384 |
| Lsp1109I | GCAGC | 3 cut(s) | 100, 144, 347 |
| MaeI | CTAG | 1 cut(s) | 73 |
| MalI | GATC | 2 cut(s) | 71, 113 |
| MbiI | CCGCTC | 1 cut(s) | 153 |
| MboI | GATC | 2 cut(s) | 69, 111 |
| MboII | GAAGA | 1 cut(s) | 118 |
| MflI | RGATCY | 1 cut(s) | 69 |
| MhlI | GDGCHC | 1 cut(s) | 389 |
| MluCI | AATT | 2 cut(s) | 205, 289 |
| MnlI | CCTC | 3 cut(s) | 30, 459, 462 |
| Mph1103I | ATGCAT | 1 cut(s) | 104 |
| MspI | CCGG | 3 cut(s) | 251, 381, 398 |
| MspR9I | CCNGG | 2 cut(s) | 382, 415 |
| Mva1269I | GAATGC | 1 cut(s) | 90 |
| MvaI | CCWGG | 1 cut(s) | 415 |
| MvnI | CGCG | 5 cut(s) | 53, 60, 66, 134, 360 |
| NciI | CCSGG | 1 cut(s) | 382 |
| NcoI | CCATGG | 1 cut(s) | 317 |
| NdeII | GATC | 2 cut(s) | 69, 111 |
| NlaIII | CATG | 3 cut(s) | 102, 286, 321 |
| NlaIV | GGNNCC | 1 cut(s) | 351 |
| NruI | TCGCGA | 1 cut(s) | 53 |
| NsiI | ATGCAT | 1 cut(s) | 104 |
| PctI | GAATGC | 1 cut(s) | 90 |
| PfeI | GAWTC | 2 cut(s) | 295, 404 |
| PfoI | TCCNGGA | 1 cut(s) | 413 |
| PkrI | GCNGC | 6 cut(s) | 90, 136, 139, 152, 159, 337 |
| Psp6I | CCWGG | 1 cut(s) | 413 |
| PspFI | CCCAGC | 1 cut(s) | 323 |
| PspGI | CCWGG | 1 cut(s) | 413 |
| PspN4I | GGNNCC | 1 cut(s) | 351 |
| PspPI | GGNCC | 1 cut(s) | 321 |
| PsuI | RGATCY | 1 cut(s) | 69 |
| RruI | TCGCGA | 1 cut(s) | 53 |
| RsaI | GTAC | 1 cut(s) | 471 |
| RsaNI | GTAC | 1 cut(s) | 470 |
| SatI | GCNGC | 6 cut(s) | 89, 135, 138, 151, 158, 336 |
| Sau3AI | GATC | 2 cut(s) | 69, 111 |
| Sau96I | GGNCC | 1 cut(s) | 321 |
| ScrFI | CCNGG | 2 cut(s) | 382, 415 |
| SduI | GDGCHC | 1 cut(s) | 389 |
| SetI | ASST | 4 cut(s) | 78, 96, 313, 451 |
| Sse9I | AATT | 2 cut(s) | 205, 289 |
| SsiI | CCGC | 5 cut(s) | 60, 134, 137, 151, 358 |
| SspMI | CTAG | 1 cut(s) | 73 |
| StyD4I | CCNGG | 2 cut(s) | 380, 413 |
| StyI | CCWWGG | 1 cut(s) | 317 |
| TaaI | ACNGT | 2 cut(s) | 331, 346 |
| TaqI | TCGA | 1 cut(s) | 293 |
| TaqII | GACCGA | 1 cut(s) | 199 |
| TasI | AATT | 2 cut(s) | 205, 289 |
| TauI | GCSGC | 3 cut(s) | 137, 140, 153 |
| TfiI | GAWTC | 2 cut(s) | 295, 404 |
| TscAI | CASTG | 2 cut(s) | 351, 471 |
| TseI | GCWGC | 3 cut(s) | 88, 157, 335 |
| TspDTI | ATGAA | 1 cut(s) | 426 |
| TspRI | CASTG | 2 cut(s) | 351, 471 |
| XapI | RAATTY | 1 cut(s) | 205 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 192 |
| XspI | CTAG | 1 cut(s) | 73 |
| Zsp2I | ATGCAT | 1 cut(s) | 104 |