Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 2670 |
| AarI | CACCTGC | 1 cut(s) | 2809 |
| AasI | GACNNNNNNGTC | 2 cut(s) | 826, 2193 |
| Acc36I | ACCTGC | 5 cut(s) | 317, 1693, 1786, 2457, 2809 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1349 |
| AccBSI | CCGCTC | 2 cut(s) | 1858, 2639 |
| AccI | GTMKAC | 1 cut(s) | 3104 |
| AccIII | TCCGGA | 1 cut(s) | 1327 |
| AcoI | YGGCCR | 4 cut(s) | 739, 1351, 1384, 2049 |
| AcuI | CTGAAG | 7 cut(s) | 1116, 1443, 1449, 1575, 1734, 2477, 2529 |
| AcyI | GRCGYC | 2 cut(s) | 1080, 2658 |
| AfaI | GTAC | 4 cut(s) | 706, 1245, 2133, 2794 |
| AfeI | AGCGCT | 2 cut(s) | 1278, 1369 |
| AflIII | ACRYGT | 3 cut(s) | 825, 2718, 2882 |
| AgeI | ACCGGT | 1 cut(s) | 763 |
| AgsI | TTSAA | 8 cut(s) | 101, 905, 1832, 1949, 1973, 2699, 2727, 2789 |
| AjiI | CACGTC | 1 cut(s) | 2885 |
| AjnI | CCWGG | 7 cut(s) | 247, 648, 919, 1112, 1296, 1374, 2232 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 856, 888 |
| Alw21I | GWGCWC | 3 cut(s) | 519, 1413, 1866 |
| Alw26I | GTCTC | 7 cut(s) | 812, 1132, 2396, 2604, 2868, 2932, 3030 |
| Alw44I | GTGCAC | 1 cut(s) | 515 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 264, 1421, 1598 |
| Ama87I | CYCGRG | 4 cut(s) | 755, 1724, 1859, 2096 |
| Aor13HI | TCCGGA | 1 cut(s) | 1327 |
| Aor51HI | AGCGCT | 2 cut(s) | 1278, 1369 |
| ApaI | GGGCCC | 2 cut(s) | 2521, 3118 |
| ApaLI | GTGCAC | 1 cut(s) | 515 |
| ArsI | GACNNNNNNTTYG | 6 cut(s) | 425, 457, 1148, 1180, 2869, 2901 |
| AseI | ATTAAT | 1 cut(s) | 2328 |
| AsiGI | ACCGGT | 1 cut(s) | 763 |
| AsuC2I | CCSGG | 2 cut(s) | 1868, 2214 |
| AsuHPI | GGTGA | 4 cut(s) | 1943, 2278, 2545, 2790 |
| AsuNHI | GCTAGC | 1 cut(s) | 1279 |
| AvaI | CYCGRG | 4 cut(s) | 755, 1724, 1859, 2096 |
| AvaII | GGWCC | 7 cut(s) | 158, 1501, 1563, 2195, 2446, 2475, 2991 |
| AxyI | CCTNAGG | 2 cut(s) | 2031, 3109 |
| BaeGI | GKGCMC | 3 cut(s) | 519, 2521, 3118 |
| BamHI | GGATCC | 2 cut(s) | 859, 1639 |
| BanII | GRGCYC | 7 cut(s) | 510, 756, 778, 1866, 2233, 2521, 3118 |
| BbsI | GAAGAC | 3 cut(s) | 89, 1437, 2706 |
| Bbv12I | GWGCWC | 3 cut(s) | 519, 1413, 1866 |
| BceAI | ACGGC | 3 cut(s) | 220, 754, 1067 |
| BcgI | CGANNNNNNTGC | 8 cut(s) | 38, 61, 72, 95, 1148, 1182, 1663, 1697 |
| BciT130I | CCWGG | 7 cut(s) | 249, 650, 921, 1114, 1298, 1376, 2234 |
| BcnI | CCSGG | 2 cut(s) | 1868, 2214 |
| BcoDI | GTCTC | 7 cut(s) | 812, 1132, 2396, 2604, 2868, 2932, 3030 |
| BfmI | CTRYAG | 2 cut(s) | 342, 2180 |
| BfoI | RGCGCY | 4 cut(s) | 167, 576, 1280, 1371 |
| BfuAI | ACCTGC | 5 cut(s) | 317, 1693, 1786, 2457, 2809 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 1050 |
| BmcAI | AGTACT | 2 cut(s) | 2133, 2794 |
| Bme1390I | CCNGG | 9 cut(s) | 249, 650, 921, 1114, 1298, 1376, 1868, 2214, 2234 |
| Bme18I | GGWCC | 7 cut(s) | 158, 1501, 1563, 2195, 2446, 2475, 2991 |
| BmeT110I | CYCGRG | 4 cut(s) | 755, 1724, 1859, 2096 |
| BmgBI | CACGTC | 1 cut(s) | 2885 |
| BmrFI | CCNGG | 9 cut(s) | 249, 650, 921, 1114, 1298, 1376, 1868, 2214, 2234 |
| BmrI | ACTGGG | 2 cut(s) | 164, 2515 |
| BmsI | GCATC | 6 cut(s) | 81, 163, 817, 1206, 2056, 2068 |
| BmtI | GCTAGC | 1 cut(s) | 1283 |
| BmuI | ACTGGG | 2 cut(s) | 164, 2515 |
| BpiI | GAAGAC | 3 cut(s) | 89, 1437, 2706 |
| BplI | GAGNNNNNCTC | 6 cut(s) | 445, 477, 2912, 2944, 3010, 3042 |
| BpmI | CTGGAG | 1 cut(s) | 270 |
| Bpu10I | CCTNAGC | 2 cut(s) | 1068, 2613 |
| BpuEI | CTTGAG | 1 cut(s) | 2567 |
| BpuMI | CCSGG | 2 cut(s) | 1868, 2214 |
| Bsa29I | ATCGAT | 2 cut(s) | 27, 498 |
| BsaHI | GRCGYC | 2 cut(s) | 1080, 2658 |
| BsaI | GGTCTC | 1 cut(s) | 1132 |
| BsaJI | CCNNGG | 8 cut(s) | 552, 999, 1083, 1296, 1374, 1517, 2232, 2529 |
| BsaWI | WCCGGW | 3 cut(s) | 149, 763, 1327 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 108, 138, 3038, 3068 |
| Bse118I | RCCGGY | 3 cut(s) | 763, 1382, 1560 |
| Bse21I | CCTNAGG | 2 cut(s) | 2031, 3109 |
| Bse3DI | GCAATG | 1 cut(s) | 2601 |
| BseAI | TCCGGA | 1 cut(s) | 1327 |
| BseBI | CCWGG | 7 cut(s) | 249, 650, 921, 1114, 1298, 1376, 2234 |
| BseCI | ATCGAT | 2 cut(s) | 27, 498 |
| BseDI | CCNNGG | 8 cut(s) | 552, 999, 1083, 1296, 1374, 1517, 2232, 2529 |
| BseGI | GGATG | 4 cut(s) | 808, 1243, 2179, 2481 |
| BseMI | GCAATG | 1 cut(s) | 2601 |
| BseRI | GAGGAG | 9 cut(s) | 1275, 1781, 2136, 2920, 2933, 2961, 3018, 3031, 3059 |
| BseSI | GKGCMC | 3 cut(s) | 519, 2521, 3118 |
| BseX3I | CGGCCG | 2 cut(s) | 739, 2049 |
| BseYI | CCCAGC | 5 cut(s) | 264, 558, 1251, 1577, 1982 |
| BsgI | GTGCAG | 4 cut(s) | 664, 1721, 1764, 1824 |
| Bsh1285I | CGRYCG | 8 cut(s) | 568, 633, 742, 943, 1872, 2052, 2343, 2349 |
| BshTI | ACCGGT | 1 cut(s) | 763 |
| BshVI | ATCGAT | 2 cut(s) | 27, 498 |
| BsiEI | CGRYCG | 8 cut(s) | 568, 633, 742, 943, 1872, 2052, 2343, 2349 |
| BsiHKAI | GWGCWC | 3 cut(s) | 519, 1413, 1866 |
| BsiHKCI | CYCGRG | 4 cut(s) | 755, 1724, 1859, 2096 |
| BsiSI | CCGG | 8 cut(s) | 150, 764, 831, 1328, 1383, 1561, 1868, 2213 |
| BslFI | GGGAC | 1 cut(s) | 2459 |
| BsmAI | GTCTC | 7 cut(s) | 812, 1132, 2396, 2604, 2868, 2932, 3030 |
| BsmBI | CGTCTC | 1 cut(s) | 3030 |
| BsmFI | GGGAC | 1 cut(s) | 2459 |
| BsmI | GAATGC | 1 cut(s) | 90 |
| Bso31I | GGTCTC | 1 cut(s) | 1132 |
| BsoBI | CYCGRG | 4 cut(s) | 755, 1724, 1859, 2096 |
| Bsp120I | GGGCCC | 2 cut(s) | 2517, 3114 |
| Bsp1286I | GDGCHC | 9 cut(s) | 510, 519, 756, 778, 1413, 1866, 2233, 2521, 3118 |
| Bsp13I | TCCGGA | 1 cut(s) | 1327 |
| Bsp19I | CCATGG | 2 cut(s) | 552, 1517 |
| Bsp68I | TCGCGA | 3 cut(s) | 288, 1317, 2412 |
| BspDI | ATCGAT | 2 cut(s) | 27, 498 |
| BspEI | TCCGGA | 1 cut(s) | 1327 |
| BspHI | TCATGA | 1 cut(s) | 3122 |
| BspMI | ACCTGC | 5 cut(s) | 317, 1693, 1786, 2457, 2809 |
| BspOI | GCTAGC | 1 cut(s) | 1283 |
| BspQI | GCTCTTC | 1 cut(s) | 1594 |
| BspTNI | GGTCTC | 1 cut(s) | 1132 |
| BsrBI | CCGCTC | 2 cut(s) | 1858, 2639 |
| BsrDI | GCAATG | 1 cut(s) | 2601 |
| BsrFI | RCCGGY | 3 cut(s) | 763, 1382, 1560 |
| BssAI | RCCGGY | 3 cut(s) | 763, 1382, 1560 |
| BssECI | CCNNGG | 8 cut(s) | 552, 999, 1083, 1296, 1374, 1517, 2232, 2529 |
| BssNI | GRCGYC | 2 cut(s) | 1080, 2658 |
| BssT1I | CCWWGG | 2 cut(s) | 552, 1517 |
| Bst2UI | CCWGG | 7 cut(s) | 249, 650, 921, 1114, 1298, 1376, 2234 |
| Bst4CI | ACNGT | 6 cut(s) | 521, 566, 614, 1465, 1885, 3088 |
| Bst6I | CTCTTC | 7 cut(s) | 33, 691, 1116, 1263, 1441, 1518, 1594 |
| BstACI | GRCGYC | 2 cut(s) | 1080, 2658 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 766 |
| BstDSI | CCRYGG | 4 cut(s) | 552, 1083, 1517, 2529 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1295 |
| BstF5I | GGATG | 4 cut(s) | 808, 1243, 2179, 2481 |
| BstH2I | RGCGCY | 4 cut(s) | 167, 576, 1280, 1371 |
| BstMAI | GTCTC | 7 cut(s) | 812, 1132, 2396, 2604, 2868, 2932, 3030 |
| BstMCI | CGRYCG | 8 cut(s) | 568, 633, 742, 943, 1872, 2052, 2343, 2349 |
| BstNI | CCWGG | 7 cut(s) | 249, 650, 921, 1114, 1298, 1376, 2234 |
| BstNSI | RCATGY | 3 cut(s) | 790, 829, 1577 |
| BstSCI | CCNGG | 9 cut(s) | 247, 648, 919, 1112, 1296, 1374, 1866, 2212, 2232 |
| BstSFI | CTRYAG | 2 cut(s) | 342, 2180 |
| BstSLI | GKGCMC | 3 cut(s) | 519, 2521, 3118 |
| BstV2I | GAAGAC | 3 cut(s) | 89, 1437, 2706 |
| BstX2I | RGATCY | 3 cut(s) | 304, 859, 1639 |
| BstYI | RGATCY | 3 cut(s) | 304, 859, 1639 |
| BstZI | CGGCCG | 2 cut(s) | 739, 2049 |
| Bsu15I | ATCGAT | 2 cut(s) | 27, 498 |
| Bsu36I | CCTNAGG | 2 cut(s) | 2031, 3109 |
| BsuTUI | ATCGAT | 2 cut(s) | 27, 498 |
| BtgI | CCRYGG | 4 cut(s) | 552, 1083, 1517, 2529 |
| BtgZI | GCGATG | 2 cut(s) | 610, 1692 |
| BtrI | CACGTC | 1 cut(s) | 2885 |
| BtsCI | GGATG | 4 cut(s) | 808, 1243, 2179, 2481 |
| BtsIMutI | CAGTG | 5 cut(s) | 699, 1509, 2061, 2974, 3001 |
| BtuMI | TCGCGA | 3 cut(s) | 288, 1317, 2412 |
| BveI | ACCTGC | 5 cut(s) | 317, 1693, 1786, 2457, 2809 |
| CaiI | CAGNNNCTG | 3 cut(s) | 264, 1421, 1598 |
| CciI | TCATGA | 1 cut(s) | 3122 |
| CciNI | GCGGCCGC | 1 cut(s) | 2049 |
| Cfr10I | RCCGGY | 3 cut(s) | 763, 1382, 1560 |
| Cfr42I | CCGCGG | 1 cut(s) | 2532 |
| ClaI | ATCGAT | 2 cut(s) | 27, 498 |
| CseI | GACGC | 5 cut(s) | 197, 1088, 1763, 2208, 2666 |
| CsiI | ACCWGGT | 1 cut(s) | 1112 |
| Csp6I | GTAC | 4 cut(s) | 705, 1244, 2132, 2793 |
| CspAI | ACCGGT | 1 cut(s) | 763 |
| CviAII | CATG | 7 cut(s) | 553, 787, 826, 1518, 1574, 2084, 3123 |
| CviQI | GTAC | 4 cut(s) | 705, 1244, 2132, 2793 |
| DrdI | GACNNNNNNGTC | 2 cut(s) | 826, 2193 |
| DseDI | GACNNNNNNGTC | 2 cut(s) | 826, 2193 |
| EaeI | YGGCCR | 4 cut(s) | 739, 1351, 1384, 2049 |
| EagI | CGGCCG | 2 cut(s) | 739, 2049 |
| Eam1104I | CTCTTC | 7 cut(s) | 33, 691, 1116, 1263, 1441, 1518, 1594 |
| EarI | CTCTTC | 7 cut(s) | 33, 691, 1116, 1263, 1441, 1518, 1594 |
| EciI | GGCGGA | 5 cut(s) | 284, 873, 2918, 2981, 3079 |
| Ecl136II | GAGCTC | 1 cut(s) | 1864 |
| EclXI | CGGCCG | 2 cut(s) | 739, 2049 |
| Eco130I | CCWWGG | 2 cut(s) | 552, 1517 |
| Eco147I | AGGCCT | 1 cut(s) | 2385 |
| Eco24I | GRGCYC | 7 cut(s) | 510, 756, 778, 1866, 2233, 2521, 3118 |
| Eco31I | GGTCTC | 1 cut(s) | 1132 |
| Eco32I | GATATC | 1 cut(s) | 472 |
| Eco47I | GGWCC | 7 cut(s) | 158, 1501, 1563, 2195, 2446, 2475, 2991 |
| Eco47III | AGCGCT | 2 cut(s) | 1278, 1369 |
| Eco52I | CGGCCG | 2 cut(s) | 739, 2049 |
| Eco53kI | GAGCTC | 1 cut(s) | 1864 |
| Eco57I | CTGAAG | 7 cut(s) | 1116, 1443, 1449, 1575, 1734, 2477, 2529 |
| Eco81I | CCTNAGG | 2 cut(s) | 2031, 3109 |
| Eco88I | CYCGRG | 4 cut(s) | 755, 1724, 1859, 2096 |
| EcoICRI | GAGCTC | 1 cut(s) | 1864 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1295 |
| EcoO109I | RGGNCCY | 5 cut(s) | 2038, 2195, 2446, 2517, 3114 |
| EcoRII | CCWGG | 7 cut(s) | 247, 648, 919, 1112, 1296, 1374, 2232 |
| EcoRV | GATATC | 1 cut(s) | 472 |
| EcoT14I | CCWWGG | 2 cut(s) | 552, 1517 |
| EcoT22I | ATGCAT | 1 cut(s) | 810 |
| EcoT38I | GRGCYC | 7 cut(s) | 510, 756, 778, 1866, 2233, 2521, 3118 |
| ErhI | CCWWGG | 2 cut(s) | 552, 1517 |
| Esp3I | CGTCTC | 1 cut(s) | 3030 |
| FaeI | CATG | 7 cut(s) | 556, 790, 829, 1521, 1577, 2087, 3126 |
| FaqI | GGGAC | 1 cut(s) | 2459 |
| FatI | CATG | 7 cut(s) | 552, 786, 825, 1517, 1573, 2083, 3122 |
| FauI | CCCGC | 5 cut(s) | 288, 294, 600, 2100, 2716 |
| FblI | GTMKAC | 1 cut(s) | 3104 |
| FokI | GGATG | 4 cut(s) | 795, 1250, 2186, 2468 |
| FriOI | GRGCYC | 7 cut(s) | 510, 756, 778, 1866, 2233, 2521, 3118 |
| GsaI | CCCAGC | 5 cut(s) | 268, 562, 1255, 1581, 1986 |
| GsuI | CTGGAG | 1 cut(s) | 270 |
| HaeII | RGCGCY | 4 cut(s) | 167, 576, 1280, 1371 |
| HapII | CCGG | 8 cut(s) | 150, 764, 831, 1328, 1383, 1561, 1868, 2213 |
| HgaI | GACGC | 5 cut(s) | 197, 1088, 1763, 2208, 2666 |
| Hin1I | GRCGYC | 2 cut(s) | 1080, 2658 |
| Hin1II | CATG | 7 cut(s) | 556, 790, 829, 1521, 1577, 2087, 3126 |
| HincII | GTYRAC | 2 cut(s) | 538, 2526 |
| HindII | GTYRAC | 2 cut(s) | 538, 2526 |
| HpaII | CCGG | 8 cut(s) | 150, 764, 831, 1328, 1383, 1561, 1868, 2213 |
| HphI | GGTGA | 4 cut(s) | 1943, 2278, 2545, 2790 |
| Hpy166II | GTNNAC | 6 cut(s) | 517, 538, 1087, 2286, 2526, 3105 |
| Hpy8I | GTNNAC | 6 cut(s) | 517, 538, 1087, 2286, 2526, 3105 |
| HpyAV | CCTTC | 9 cut(s) | 137, 234, 1094, 1212, 1577, 1758, 2480, 2963, 3061 |
| HpyCH4III | ACNGT | 6 cut(s) | 521, 566, 614, 1465, 1885, 3088 |
| HpyCH4IV | ACGT | 2 cut(s) | 747, 2884 |
| HpyCH4V | TGCA | 8 cut(s) | 517, 681, 808, 1169, 1684, 1702, 1781, 1841 |
| HpySE526I | ACGT | 2 cut(s) | 747, 2884 |
| Hsp92I | GRCGYC | 2 cut(s) | 1080, 2658 |
| Hsp92II | CATG | 7 cut(s) | 556, 790, 829, 1521, 1577, 2087, 3126 |
| Kpn2I | TCCGGA | 1 cut(s) | 1327 |
| KroI | GCCGGC | 1 cut(s) | 1382 |
| KroNI | GCCGGC | 1 cut(s) | 1384 |
| KspI | CCGCGG | 1 cut(s) | 2532 |
| LguI | GCTCTTC | 1 cut(s) | 1594 |
| LweI | GCATC | 6 cut(s) | 81, 163, 817, 1206, 2056, 2068 |
| MabI | ACCWGGT | 1 cut(s) | 1112 |
| MaeII | ACGT | 2 cut(s) | 747, 2884 |
| MaeIII | GTNAC | 2 cut(s) | 2533, 2885 |
| MbiI | CCGCTC | 2 cut(s) | 1858, 2639 |
| MfeI | CAATTG | 3 cut(s) | 1061, 1135, 2501 |
| MflI | RGATCY | 3 cut(s) | 304, 859, 1639 |
| MhlI | GDGCHC | 9 cut(s) | 510, 519, 756, 778, 1413, 1866, 2233, 2521, 3118 |
| MluCI | AATT | 6 cut(s) | 524, 1061, 1135, 2501, 2677, 2727 |
| MluI | ACGCGT | 1 cut(s) | 2718 |
| MlyI | GAGTC | 7 cut(s) | 238, 706, 1138, 1427, 2930, 3028, 3062 |
| MmeI | TCCRAC | 5 cut(s) | 162, 447, 1710, 2656, 3036 |
| Mph1103I | ATGCAT | 1 cut(s) | 810 |
| MroI | TCCGGA | 1 cut(s) | 1327 |
| MroNI | GCCGGC | 1 cut(s) | 1382 |
| MseI | TTAA | 4 cut(s) | 44, 2328, 2757, 2870 |
| MspA1I | CMGCKG | 6 cut(s) | 1494, 1595, 1892, 1904, 2054, 2531 |
| MspI | CCGG | 8 cut(s) | 150, 764, 831, 1328, 1383, 1561, 1868, 2213 |
| MspR9I | CCNGG | 9 cut(s) | 249, 650, 921, 1114, 1298, 1376, 1868, 2214, 2234 |
| MunI | CAATTG | 3 cut(s) | 1061, 1135, 2501 |
| Mva1269I | GAATGC | 1 cut(s) | 90 |
| MvaI | CCWGG | 7 cut(s) | 249, 650, 921, 1114, 1298, 1376, 2234 |
| NaeI | GCCGGC | 1 cut(s) | 1384 |
| NciI | CCSGG | 2 cut(s) | 1868, 2214 |
| NcoI | CCATGG | 2 cut(s) | 552, 1517 |
| NgoMIV | GCCGGC | 1 cut(s) | 1382 |
| NheI | GCTAGC | 1 cut(s) | 1279 |
| NlaIII | CATG | 7 cut(s) | 556, 790, 829, 1521, 1577, 2087, 3126 |
| NmeAIII | GCCGAG | 1 cut(s) | 1024 |
| NmuCI | GTSAC | 2 cut(s) | 2533, 2885 |
| NotI | GCGGCCGC | 1 cut(s) | 2049 |
| NruI | TCGCGA | 3 cut(s) | 288, 1317, 2412 |
| NsiI | ATGCAT | 1 cut(s) | 810 |
| NspI | RCATGY | 3 cut(s) | 790, 829, 1577 |
| PaeR7I | CTCGAG | 1 cut(s) | 1859 |
| PagI | TCATGA | 1 cut(s) | 3122 |
| PaqCI | CACCTGC | 1 cut(s) | 2809 |
| PceI | AGGCCT | 1 cut(s) | 2385 |
| PciI | ACATGT | 1 cut(s) | 825 |
| PciSI | GCTCTTC | 1 cut(s) | 1594 |
| PcsI | WCGNNNNNNNCGW | 5 cut(s) | 525, 744, 1314, 2260, 2641 |
| PctI | GAATGC | 1 cut(s) | 90 |
| PdiI | GCCGGC | 1 cut(s) | 1384 |
| PfeI | GAWTC | 5 cut(s) | 639, 1312, 2746, 2768, 2843 |
| PflFI | GACNNNGTC | 1 cut(s) | 156 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1349 |
| PfoI | TCCNGGA | 2 cut(s) | 247, 648 |
| PinAI | ACCGGT | 1 cut(s) | 763 |
| Ple19I | CGATCG | 1 cut(s) | 633 |
| PleI | GAGTC | 7 cut(s) | 238, 706, 1138, 1427, 2929, 3027, 3061 |
| PpsI | GAGTC | 7 cut(s) | 238, 706, 1138, 1427, 2929, 3027, 3061 |
| PpuMI | RGGWCCY | 2 cut(s) | 2195, 2446 |
| PscI | ACATGT | 1 cut(s) | 825 |
| PshBI | ATTAAT | 1 cut(s) | 2328 |
| PsiI | TTATAA | 1 cut(s) | 2670 |
| Psp124BI | GAGCTC | 1 cut(s) | 1866 |
| Psp5II | RGGWCCY | 2 cut(s) | 2195, 2446 |
| Psp6I | CCWGG | 7 cut(s) | 247, 648, 919, 1112, 1296, 1374, 2232 |
| PspFI | CCCAGC | 5 cut(s) | 264, 558, 1251, 1577, 1982 |
| PspGI | CCWGG | 7 cut(s) | 247, 648, 919, 1112, 1296, 1374, 2232 |
| PspOMI | GGGCCC | 2 cut(s) | 2517, 3114 |
| PspPPI | RGGWCCY | 2 cut(s) | 2195, 2446 |
| PspXI | VCTCGAGB | 1 cut(s) | 1859 |
| PstNI | CAGNNNCTG | 3 cut(s) | 264, 1421, 1598 |
| PsuI | RGATCY | 3 cut(s) | 304, 859, 1639 |
| PsyI | GACNNNGTC | 1 cut(s) | 156 |
| PvuI | CGATCG | 1 cut(s) | 633 |
| PvuII | CAGCTG | 3 cut(s) | 1494, 1595, 1892 |
| RruI | TCGCGA | 3 cut(s) | 288, 1317, 2412 |
| RsaI | GTAC | 4 cut(s) | 706, 1245, 2133, 2794 |
| RsaNI | GTAC | 4 cut(s) | 705, 1244, 2132, 2793 |
| SacI | GAGCTC | 1 cut(s) | 1866 |
| SacII | CCGCGG | 1 cut(s) | 2532 |
| SapI | GCTCTTC | 1 cut(s) | 1594 |
| SaqAI | TTAA | 4 cut(s) | 44, 2328, 2757, 2870 |
| ScaI | AGTACT | 2 cut(s) | 2133, 2794 |
| SchI | GAGTC | 7 cut(s) | 238, 706, 1138, 1427, 2930, 3028, 3062 |
| ScrFI | CCNGG | 9 cut(s) | 249, 650, 921, 1114, 1298, 1376, 1868, 2214, 2234 |
| SduI | GDGCHC | 9 cut(s) | 510, 519, 756, 778, 1413, 1866, 2233, 2521, 3118 |
| SexAI | ACCWGGT | 1 cut(s) | 1112 |
| SfaNI | GCATC | 6 cut(s) | 81, 163, 817, 1206, 2056, 2068 |
| SfcI | CTRYAG | 2 cut(s) | 342, 2180 |
| Sfr274I | CTCGAG | 1 cut(s) | 1859 |
| Sfr303I | CCGCGG | 1 cut(s) | 2532 |
| SgrBI | CCGCGG | 1 cut(s) | 2532 |
| SinI | GGWCC | 7 cut(s) | 158, 1501, 1563, 2195, 2446, 2475, 2991 |
| SlaI | CTCGAG | 1 cut(s) | 1859 |
| SmlI | CTYRAG | 2 cut(s) | 1859, 2546 |
| SmoI | CTYRAG | 2 cut(s) | 1859, 2546 |
| Sse9I | AATT | 6 cut(s) | 524, 1061, 1135, 2501, 2677, 2727 |
| SseBI | AGGCCT | 1 cut(s) | 2385 |
| SspI | AATATT | 2 cut(s) | 656, 2240 |
| SstI | GAGCTC | 1 cut(s) | 1866 |
| StuI | AGGCCT | 1 cut(s) | 2385 |
| StyD4I | CCNGG | 9 cut(s) | 247, 648, 919, 1112, 1296, 1374, 1866, 2212, 2232 |
| StyI | CCWWGG | 2 cut(s) | 552, 1517 |
| TaaI | ACNGT | 6 cut(s) | 521, 566, 614, 1465, 1885, 3088 |
| TaiI | ACGT | 2 cut(s) | 750, 2887 |
| TaqII | GACCGA | 1 cut(s) | 1560 |
| TasI | AATT | 6 cut(s) | 524, 1061, 1135, 2501, 2677, 2727 |
| TatI | WGTACW | 2 cut(s) | 2131, 2792 |
| TfiI | GAWTC | 5 cut(s) | 639, 1312, 2746, 2768, 2843 |
| Tru1I | TTAA | 4 cut(s) | 44, 2328, 2757, 2870 |
| Tru9I | TTAA | 4 cut(s) | 44, 2328, 2757, 2870 |
| TscAI | CASTG | 5 cut(s) | 706, 1516, 2068, 2981, 3001 |
| TseFI | GTSAC | 2 cut(s) | 2533, 2885 |
| Tsp45I | GTSAC | 2 cut(s) | 2533, 2885 |
| TspDTI | ATGAA | 5 cut(s) | 661, 1122, 1545, 2346, 2725 |
| TspGWI | ACGGA | 6 cut(s) | 206, 651, 1104, 1120, 1652, 3012 |
| TspRI | CASTG | 5 cut(s) | 706, 1516, 2068, 2981, 3001 |
| Tth111I | GACNNNGTC | 1 cut(s) | 156 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1349 |
| VneI | GTGCAC | 1 cut(s) | 515 |
| VpaK11BI | GGWCC | 7 cut(s) | 158, 1501, 1563, 2195, 2446, 2475, 2991 |
| VspI | ATTAAT | 1 cut(s) | 2328 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1295 |
| XceI | RCATGY | 3 cut(s) | 790, 829, 1577 |
| XhoI | CTCGAG | 1 cut(s) | 1859 |
| XmiI | GTMKAC | 1 cut(s) | 3104 |
| ZrmI | AGTACT | 2 cut(s) | 2133, 2794 |
| Zsp2I | ATGCAT | 1 cut(s) | 810 |