Plant mobile domain
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1143 |
| AarI | CACCTGC | 1 cut(s) | 973 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 1812 |
| Acc16I | TGCGCA | 1 cut(s) | 273 |
| Acc36I | ACCTGC | 3 cut(s) | 371, 973, 1597 |
| AccB1I | GGYRCC | 2 cut(s) | 83, 163 |
| AccB7I | CCANNNNNTGG | 3 cut(s) | 1607, 1640, 2176 |
| AccI | GTMKAC | 1 cut(s) | 220 |
| AccII | CGCG | 6 cut(s) | 169, 342, 999, 1652, 1755, 2043 |
| AclWI | GGATC | 7 cut(s) | 892, 905, 1754, 1766, 1839, 1852, 2243 |
| AcoI | YGGCCR | 6 cut(s) | 302, 499, 574, 774, 793, 2115 |
| AcuI | CTGAAG | 4 cut(s) | 1443, 1578, 1701, 1929 |
| AcyI | GRCGYC | 1 cut(s) | 972 |
| AfaI | GTAC | 6 cut(s) | 841, 1010, 1083, 1353, 1368, 2226 |
| AgsI | TTSAA | 6 cut(s) | 917, 1112, 1505, 2057, 2132, 2243 |
| AhlI | ACTAGT | 1 cut(s) | 1270 |
| AjnI | CCWGG | 5 cut(s) | 247, 771, 1126, 1158, 2013 |
| AluBI | AGCT | 8 cut(s) | 328, 347, 639, 1225, 1486, 2174, 2183, 2279 |
| AluI | AGCT | 8 cut(s) | 328, 347, 639, 1225, 1486, 2174, 2183, 2279 |
| Alw21I | GWGCWC | 2 cut(s) | 1227, 1488 |
| Alw26I | GTCTC | 2 cut(s) | 1456, 1462 |
| AlwI | GGATC | 7 cut(s) | 892, 905, 1754, 1766, 1839, 1852, 2243 |
| AlwNI | CAGNNNCTG | 4 cut(s) | 1625, 1640, 1799, 1982 |
| Ama87I | CYCGRG | 1 cut(s) | 354 |
| ApaI | GGGCCC | 1 cut(s) | 830 |
| ApeKI | GCWGC | 3 cut(s) | 446, 1853, 1976 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 479, 511 |
| AspLEI | GCGC | 4 cut(s) | 274, 1320, 1757, 1981 |
| AspS9I | GGNCC | 8 cut(s) | 610, 758, 826, 827, 1155, 1328, 1340, 2062 |
| AsuHPI | GGTGA | 3 cut(s) | 187, 569, 2015 |
| AvaI | CYCGRG | 1 cut(s) | 354 |
| AvaII | GGWCC | 2 cut(s) | 758, 2062 |
| BaeGI | GKGCMC | 3 cut(s) | 88, 300, 830 |
| BalI | TGGCCA | 4 cut(s) | 304, 501, 576, 776 |
| BamHI | GGATCC | 2 cut(s) | 897, 1844 |
| BanI | GGYRCC | 2 cut(s) | 83, 163 |
| BanII | GRGCYC | 4 cut(s) | 830, 1135, 1227, 1488 |
| BauI | CACGAG | 1 cut(s) | 1940 |
| BbsI | GAAGAC | 1 cut(s) | 1695 |
| Bbv12I | GWGCWC | 2 cut(s) | 1227, 1488 |
| BbvI | GCAGC | 3 cut(s) | 433, 1840, 1988 |
| BccI | CCATC | 5 cut(s) | 313, 548, 557, 1406, 1666 |
| BceAI | ACGGC | 2 cut(s) | 783, 808 |
| BcgI | CGANNNNNNTGC | 6 cut(s) | 38, 72, 263, 297, 1526, 1560 |
| BciT130I | CCWGG | 5 cut(s) | 249, 773, 1128, 1160, 2015 |
| BciVI | GTATCC | 1 cut(s) | 654 |
| BclI | TGATCA | 1 cut(s) | 1432 |
| BcoDI | GTCTC | 2 cut(s) | 1456, 1462 |
| BcuI | ACTAGT | 1 cut(s) | 1270 |
| BfaI | CTAG | 6 cut(s) | 155, 182, 704, 876, 885, 1271 |
| BfoI | RGCGCY | 1 cut(s) | 1982 |
| BfuAI | ACCTGC | 3 cut(s) | 371, 973, 1597 |
| BfuI | GTATCC | 1 cut(s) | 654 |
| BglII | AGATCT | 1 cut(s) | 358 |
| BisI | GCNGC | 7 cut(s) | 447, 796, 1650, 1731, 1854, 1977, 2091 |
| BlsI | GCNGC | 7 cut(s) | 448, 797, 1651, 1732, 1855, 1978, 2092 |
| BmcAI | AGTACT | 1 cut(s) | 1083 |
| Bme1390I | CCNGG | 5 cut(s) | 249, 773, 1128, 1160, 2015 |
| Bme18I | GGWCC | 2 cut(s) | 758, 2062 |
| BmeT110I | CYCGRG | 1 cut(s) | 354 |
| BmgT120I | GGNCC | 8 cut(s) | 610, 758, 826, 827, 1155, 1328, 1340, 2062 |
| BmrFI | CCNGG | 5 cut(s) | 249, 773, 1128, 1160, 2015 |
| BmrI | ACTGGG | 2 cut(s) | 1347, 1396 |
| BmsI | GCATC | 5 cut(s) | 234, 871, 1211, 1282, 1516 |
| BmuI | ACTGGG | 2 cut(s) | 1347, 1396 |
| BpiI | GAAGAC | 1 cut(s) | 1695 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1022, 1054 |
| BpmI | CTGGAG | 4 cut(s) | 270, 1486, 1617, 2292 |
| Bpu10I | CCTNAGC | 1 cut(s) | 2205 |
| BpuEI | CTTGAG | 2 cut(s) | 333, 1922 |
| Bsa29I | ATCGAT | 2 cut(s) | 27, 552 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1431 |
| BsaHI | GRCGYC | 1 cut(s) | 972 |
| BsaJI | CCNNGG | 8 cut(s) | 606, 647, 761, 1127, 1158, 1407, 1775, 2013 |
| BsaWI | WCCGGW | 3 cut(s) | 74, 229, 2000 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 1327, 1357, 1615, 1645, 2265, 2295 |
| Bse3DI | GCAATG | 2 cut(s) | 953, 2210 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1431 |
| BseBI | CCWGG | 5 cut(s) | 249, 773, 1128, 1160, 2015 |
| BseCI | ATCGAT | 2 cut(s) | 27, 552 |
| BseDI | CCNNGG | 8 cut(s) | 606, 647, 761, 1127, 1158, 1407, 1775, 2013 |
| BseGI | GGATG | 5 cut(s) | 249, 305, 862, 1013, 1417 |
| BseJI | GATNNNNATC | 1 cut(s) | 1431 |
| BseMI | GCAATG | 2 cut(s) | 953, 2210 |
| BseMII | CTCAG | 5 cut(s) | 142, 1020, 1228, 2196, 2301 |
| BseRI | GAGGAG | 4 cut(s) | 1016, 1095, 1274, 2289 |
| BseSI | GKGCMC | 3 cut(s) | 88, 300, 830 |
| BseX3I | CGGCCG | 1 cut(s) | 793 |
| BseXI | GCAGC | 3 cut(s) | 433, 1840, 1988 |
| BseYI | CCCAGC | 1 cut(s) | 2183 |
| BsgI | GTGCAG | 1 cut(s) | 1638 |
| Bsh1236I | CGCG | 6 cut(s) | 169, 342, 999, 1652, 1755, 2043 |
| Bsh1285I | CGRYCG | 2 cut(s) | 796, 1615 |
| BshNI | GGYRCC | 2 cut(s) | 83, 163 |
| BshVI | ATCGAT | 2 cut(s) | 27, 552 |
| BsiEI | CGRYCG | 2 cut(s) | 796, 1615 |
| BsiHKAI | GWGCWC | 2 cut(s) | 1227, 1488 |
| BsiHKCI | CYCGRG | 1 cut(s) | 354 |
| BsiSI | CCGG | 3 cut(s) | 75, 230, 2001 |
| BslFI | GGGAC | 2 cut(s) | 1388, 1429 |
| BsmAI | GTCTC | 2 cut(s) | 1456, 1462 |
| BsmFI | GGGAC | 2 cut(s) | 1388, 1429 |
| BsoBI | CYCGRG | 1 cut(s) | 354 |
| Bsp120I | GGGCCC | 1 cut(s) | 826 |
| Bsp1286I | GDGCHC | 6 cut(s) | 88, 300, 830, 1135, 1227, 1488 |
| Bsp19I | CCATGG | 2 cut(s) | 606, 1775 |
| Bsp68I | TCGCGA | 3 cut(s) | 342, 999, 2043 |
| BspCNI | CTCAG | 5 cut(s) | 141, 1021, 1227, 2197, 2302 |
| BspDI | ATCGAT | 2 cut(s) | 27, 552 |
| BspFNI | CGCG | 6 cut(s) | 169, 342, 999, 1652, 1755, 2043 |
| BspHI | TCATGA | 1 cut(s) | 1491 |
| BspMI | ACCTGC | 3 cut(s) | 371, 973, 1597 |
| BspPI | GGATC | 7 cut(s) | 892, 905, 1754, 1766, 1839, 1852, 2243 |
| BspQI | GCTCTTC | 1 cut(s) | 1493 |
| BspT107I | GGYRCC | 2 cut(s) | 83, 163 |
| BsrDI | GCAATG | 2 cut(s) | 953, 2210 |
| BssECI | CCNNGG | 8 cut(s) | 606, 647, 761, 1127, 1158, 1407, 1775, 2013 |
| BssNI | GRCGYC | 1 cut(s) | 972 |
| BssSI | CACGAG | 1 cut(s) | 1940 |
| BssT1I | CCWWGG | 3 cut(s) | 606, 761, 1775 |
| Bst2BI | CACGAG | 1 cut(s) | 1940 |
| Bst2UI | CCWGG | 5 cut(s) | 249, 773, 1128, 1160, 2015 |
| Bst4CI | ACNGT | 4 cut(s) | 322, 425, 839, 2305 |
| Bst6I | CTCTTC | 6 cut(s) | 1493, 1500, 1699, 2043, 2052, 2100 |
| BstACI | GRCGYC | 1 cut(s) | 972 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 1063, 1625 |
| BstDEI | CTNAG | 6 cut(s) | 128, 1029, 1078, 1214, 2205, 2310 |
| BstDSI | CCRYGG | 4 cut(s) | 606, 647, 1407, 1775 |
| BstF5I | GGATG | 5 cut(s) | 249, 305, 862, 1013, 1417 |
| BstFNI | CGCG | 6 cut(s) | 169, 342, 999, 1652, 1755, 2043 |
| BstH2I | RGCGCY | 1 cut(s) | 1982 |
| BstHHI | GCGC | 4 cut(s) | 274, 1320, 1757, 1981 |
| BstMAI | GTCTC | 2 cut(s) | 1456, 1462 |
| BstMCI | CGRYCG | 2 cut(s) | 796, 1615 |
| BstNI | CCWGG | 5 cut(s) | 249, 773, 1128, 1160, 2015 |
| BstNSI | RCATGY | 1 cut(s) | 1363 |
| BstSCI | CCNGG | 5 cut(s) | 247, 771, 1126, 1158, 2013 |
| BstSLI | GKGCMC | 3 cut(s) | 88, 300, 830 |
| BstUI | CGCG | 6 cut(s) | 169, 342, 999, 1652, 1755, 2043 |
| BstV1I | GCAGC | 3 cut(s) | 433, 1840, 1988 |
| BstV2I | GAAGAC | 1 cut(s) | 1695 |
| BstX2I | RGATCY | 3 cut(s) | 358, 897, 1844 |
| BstYI | RGATCY | 3 cut(s) | 358, 897, 1844 |
| BstZI | CGGCCG | 1 cut(s) | 793 |
| Bsu15I | ATCGAT | 2 cut(s) | 27, 552 |
| BsuI | GTATCC | 1 cut(s) | 654 |
| BsuTUI | ATCGAT | 2 cut(s) | 27, 552 |
| BtgI | CCRYGG | 4 cut(s) | 606, 647, 1407, 1775 |
| BtgZI | GCGATG | 1 cut(s) | 1685 |
| BtsCI | GGATG | 5 cut(s) | 249, 305, 862, 1013, 1417 |
| BtsIMutI | CAGTG | 7 cut(s) | 298, 327, 753, 825, 992, 1638, 2297 |
| BtuMI | TCGCGA | 3 cut(s) | 342, 999, 2043 |
| BveI | ACCTGC | 3 cut(s) | 371, 973, 1597 |
| CaiI | CAGNNNCTG | 4 cut(s) | 1625, 1640, 1799, 1982 |
| CciI | TCATGA | 1 cut(s) | 1491 |
| CfoI | GCGC | 4 cut(s) | 274, 1320, 1757, 1981 |
| Cfr13I | GGNCC | 8 cut(s) | 610, 758, 826, 827, 1155, 1328, 1340, 2062 |
| ClaI | ATCGAT | 2 cut(s) | 27, 552 |
| CseI | GACGC | 3 cut(s) | 197, 980, 1986 |
| Csp6I | GTAC | 6 cut(s) | 840, 1009, 1082, 1352, 1367, 2225 |
| CviAII | CATG | 7 cut(s) | 572, 607, 859, 1058, 1360, 1492, 1776 |
| CviQI | GTAC | 6 cut(s) | 840, 1009, 1082, 1352, 1367, 2225 |
| DdeI | CTNAG | 6 cut(s) | 128, 1029, 1078, 1214, 2205, 2310 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 1812 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 1812 |
| EaeI | YGGCCR | 6 cut(s) | 302, 499, 574, 774, 793, 2115 |
| EagI | CGGCCG | 1 cut(s) | 793 |
| Eam1104I | CTCTTC | 6 cut(s) | 1493, 1500, 1699, 2043, 2052, 2100 |
| EarI | CTCTTC | 6 cut(s) | 1493, 1500, 1699, 2043, 2052, 2100 |
| EciI | GGCGGA | 2 cut(s) | 730, 1335 |
| Ecl136II | GAGCTC | 2 cut(s) | 1225, 1486 |
| EclXI | CGGCCG | 1 cut(s) | 793 |
| Eco130I | CCWWGG | 3 cut(s) | 606, 761, 1775 |
| Eco24I | GRGCYC | 4 cut(s) | 830, 1135, 1227, 1488 |
| Eco32I | GATATC | 1 cut(s) | 1517 |
| Eco47I | GGWCC | 2 cut(s) | 758, 2062 |
| Eco52I | CGGCCG | 1 cut(s) | 793 |
| Eco53kI | GAGCTC | 2 cut(s) | 1225, 1486 |
| Eco57I | CTGAAG | 4 cut(s) | 1443, 1578, 1701, 1929 |
| Eco88I | CYCGRG | 1 cut(s) | 354 |
| EcoICRI | GAGCTC | 2 cut(s) | 1225, 1486 |
| EcoO109I | RGGNCCY | 3 cut(s) | 827, 1155, 2062 |
| EcoRII | CCWGG | 5 cut(s) | 247, 771, 1126, 1158, 2013 |
| EcoRV | GATATC | 1 cut(s) | 1517 |
| EcoT14I | CCWWGG | 3 cut(s) | 606, 761, 1775 |
| EcoT22I | ATGCAT | 1 cut(s) | 864 |
| EcoT38I | GRGCYC | 4 cut(s) | 830, 1135, 1227, 1488 |
| ErhI | CCWWGG | 3 cut(s) | 606, 761, 1775 |
| FaeI | CATG | 7 cut(s) | 575, 610, 862, 1061, 1363, 1495, 1779 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 713, 745, 1504, 1536 |
| FaqI | GGGAC | 2 cut(s) | 1388, 1429 |
| FatI | CATG | 7 cut(s) | 571, 606, 858, 1057, 1359, 1491, 1775 |
| FauI | CCCGC | 2 cut(s) | 95, 1722 |
| FbaI | TGATCA | 1 cut(s) | 1432 |
| FblI | GTMKAC | 1 cut(s) | 220 |
| Fnu4HI | GCNGC | 7 cut(s) | 447, 796, 1650, 1731, 1854, 1977, 2091 |
| FokI | GGATG | 5 cut(s) | 256, 292, 849, 1000, 1424 |
| FriOI | GRGCYC | 4 cut(s) | 830, 1135, 1227, 1488 |
| Fsp4HI | GCNGC | 7 cut(s) | 447, 796, 1650, 1731, 1854, 1977, 2091 |
| FspBI | CTAG | 6 cut(s) | 155, 182, 704, 876, 885, 1271 |
| FspI | TGCGCA | 1 cut(s) | 273 |
| GlaI | GCGC | 4 cut(s) | 273, 1319, 1756, 1980 |
| GluI | GCNGC | 7 cut(s) | 447, 796, 1650, 1731, 1854, 1977, 2091 |
| GsaI | CCCAGC | 1 cut(s) | 2187 |
| GsuI | CTGGAG | 4 cut(s) | 270, 1486, 1617, 2292 |
| HaeII | RGCGCY | 1 cut(s) | 1982 |
| HapII | CCGG | 3 cut(s) | 75, 230, 2001 |
| HgaI | GACGC | 3 cut(s) | 197, 980, 1986 |
| HhaI | GCGC | 4 cut(s) | 274, 1320, 1757, 1981 |
| Hin1I | GRCGYC | 1 cut(s) | 972 |
| Hin1II | CATG | 7 cut(s) | 575, 610, 862, 1061, 1363, 1495, 1779 |
| Hin6I | GCGC | 4 cut(s) | 272, 1318, 1755, 1979 |
| HinP1I | GCGC | 4 cut(s) | 272, 1318, 1755, 1979 |
| HincII | GTYRAC | 2 cut(s) | 221, 1459 |
| HindII | GTYRAC | 2 cut(s) | 221, 1459 |
| HpaII | CCGG | 3 cut(s) | 75, 230, 2001 |
| HphI | GGTGA | 3 cut(s) | 187, 569, 2015 |
| Hpy166II | GTNNAC | 3 cut(s) | 221, 1011, 1459 |
| Hpy8I | GTNNAC | 3 cut(s) | 221, 1011, 1459 |
| Hpy99I | CGWCG | 4 cut(s) | 191, 222, 1818, 1924 |
| HpyAV | CCTTC | 9 cut(s) | 234, 425, 460, 986, 1553, 1835, 1856, 1973, 2275 |
| HpyCH4III | ACNGT | 4 cut(s) | 322, 425, 839, 2305 |
| HpyCH4IV | ACGT | 2 cut(s) | 375, 1919 |
| HpyCH4V | TGCA | 8 cut(s) | 571, 720, 862, 1057, 1202, 1619, 1743, 1955 |
| HpyF3I | CTNAG | 6 cut(s) | 128, 1029, 1078, 1214, 2205, 2310 |
| HpySE526I | ACGT | 2 cut(s) | 375, 1919 |
| Hsp92I | GRCGYC | 1 cut(s) | 972 |
| Hsp92II | CATG | 7 cut(s) | 575, 610, 862, 1061, 1363, 1495, 1779 |
| HspAI | GCGC | 4 cut(s) | 272, 1318, 1755, 1979 |
| Ksp22I | TGATCA | 1 cut(s) | 1432 |
| LguI | GCTCTTC | 1 cut(s) | 1493 |
| LmnI | GCTCC | 7 cut(s) | 10, 325, 1138, 1237, 1675, 2158, 2276 |
| Lsp1109I | GCAGC | 3 cut(s) | 433, 1840, 1988 |
| LweI | GCATC | 5 cut(s) | 234, 871, 1211, 1282, 1516 |
| MaeI | CTAG | 6 cut(s) | 155, 182, 704, 876, 885, 1271 |
| MaeII | ACGT | 2 cut(s) | 375, 1919 |
| MaeIII | GTNAC | 3 cut(s) | 620, 1539, 1621 |
| MfeI | CAATTG | 1 cut(s) | 1722 |
| MflI | RGATCY | 3 cut(s) | 358, 897, 1844 |
| MhlI | GDGCHC | 6 cut(s) | 88, 300, 830, 1135, 1227, 1488 |
| MlsI | TGGCCA | 4 cut(s) | 304, 501, 576, 776 |
| MluCI | AATT | 6 cut(s) | 78, 578, 615, 1138, 1323, 1722 |
| MluNI | TGGCCA | 4 cut(s) | 304, 501, 576, 776 |
| MlyI | GAGTC | 4 cut(s) | 126, 578, 760, 1685 |
| MmeI | TCCRAC | 1 cut(s) | 1291 |
| Mox20I | TGGCCA | 4 cut(s) | 304, 501, 576, 776 |
| Mph1103I | ATGCAT | 1 cut(s) | 864 |
| MscI | TGGCCA | 4 cut(s) | 304, 501, 576, 776 |
| MseI | TTAA | 3 cut(s) | 1086, 1511, 2294 |
| MslI | CAYNNNNRTG | 1 cut(s) | 320 |
| Msp20I | TGGCCA | 4 cut(s) | 304, 501, 576, 776 |
| MspA1I | CMGCKG | 1 cut(s) | 1853 |
| MspI | CCGG | 3 cut(s) | 75, 230, 2001 |
| MspR9I | CCNGG | 5 cut(s) | 249, 773, 1128, 1160, 2015 |
| MunI | CAATTG | 1 cut(s) | 1722 |
| MvaI | CCWGG | 5 cut(s) | 249, 773, 1128, 1160, 2015 |
| MvnI | CGCG | 6 cut(s) | 169, 342, 999, 1652, 1755, 2043 |
| NcoI | CCATGG | 2 cut(s) | 606, 1775 |
| NlaIII | CATG | 7 cut(s) | 575, 610, 862, 1061, 1363, 1495, 1779 |
| NmeAIII | GCCGAG | 2 cut(s) | 140, 2143 |
| NmuCI | GTSAC | 1 cut(s) | 620 |
| NruI | TCGCGA | 3 cut(s) | 342, 999, 2043 |
| NsbI | TGCGCA | 1 cut(s) | 273 |
| NsiI | ATGCAT | 1 cut(s) | 864 |
| NspI | RCATGY | 1 cut(s) | 1363 |
| PaeI | GCATGC | 1 cut(s) | 1363 |
| PagI | TCATGA | 1 cut(s) | 1491 |
| PaqCI | CACCTGC | 1 cut(s) | 973 |
| PciSI | GCTCTTC | 1 cut(s) | 1493 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1810 |
| PfeI | GAWTC | 6 cut(s) | 139, 173, 913, 1095, 1985, 2122 |
| PflMI | CCANNNNNTGG | 3 cut(s) | 1607, 1640, 2176 |
| PkrI | GCNGC | 7 cut(s) | 448, 797, 1651, 1732, 1855, 1978, 2092 |
| PleI | GAGTC | 4 cut(s) | 126, 578, 760, 1685 |
| PpsI | GAGTC | 4 cut(s) | 126, 578, 760, 1685 |
| PpuMI | RGGWCCY | 1 cut(s) | 2062 |
| PsiI | TTATAA | 1 cut(s) | 1143 |
| Psp124BI | GAGCTC | 2 cut(s) | 1227, 1488 |
| Psp5II | RGGWCCY | 1 cut(s) | 2062 |
| Psp6I | CCWGG | 5 cut(s) | 247, 771, 1126, 1158, 2013 |
| PspFI | CCCAGC | 1 cut(s) | 2183 |
| PspGI | CCWGG | 5 cut(s) | 247, 771, 1126, 1158, 2013 |
| PspOMI | GGGCCC | 1 cut(s) | 826 |
| PspPI | GGNCC | 8 cut(s) | 610, 758, 826, 827, 1155, 1328, 1340, 2062 |
| PspPPI | RGGWCCY | 1 cut(s) | 2062 |
| PstNI | CAGNNNCTG | 4 cut(s) | 1625, 1640, 1799, 1982 |
| PsuI | RGATCY | 3 cut(s) | 358, 897, 1844 |
| RruI | TCGCGA | 3 cut(s) | 342, 999, 2043 |
| RsaI | GTAC | 6 cut(s) | 841, 1010, 1083, 1353, 1368, 2226 |
| RsaNI | GTAC | 6 cut(s) | 840, 1009, 1082, 1352, 1367, 2225 |
| RseI | CAYNNNNRTG | 1 cut(s) | 320 |
| SacI | GAGCTC | 2 cut(s) | 1227, 1488 |
| SalI | GTCGAC | 1 cut(s) | 219 |
| SapI | GCTCTTC | 1 cut(s) | 1493 |
| SaqAI | TTAA | 3 cut(s) | 1086, 1511, 2294 |
| SatI | GCNGC | 7 cut(s) | 447, 796, 1650, 1731, 1854, 1977, 2091 |
| Sau96I | GGNCC | 8 cut(s) | 610, 758, 826, 827, 1155, 1328, 1340, 2062 |
| ScaI | AGTACT | 1 cut(s) | 1083 |
| SchI | GAGTC | 4 cut(s) | 126, 578, 760, 1685 |
| ScrFI | CCNGG | 5 cut(s) | 249, 773, 1128, 1160, 2015 |
| SduI | GDGCHC | 6 cut(s) | 88, 300, 830, 1135, 1227, 1488 |
| SfaNI | GCATC | 5 cut(s) | 234, 871, 1211, 1282, 1516 |
| SinI | GGWCC | 2 cut(s) | 758, 2062 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 320 |
| SmlI | CTYRAG | 2 cut(s) | 348, 1901 |
| SmoI | CTYRAG | 2 cut(s) | 348, 1901 |
| SpeI | ACTAGT | 1 cut(s) | 1270 |
| SphI | GCATGC | 1 cut(s) | 1363 |
| Sse9I | AATT | 6 cut(s) | 78, 578, 615, 1138, 1323, 1722 |
| SspMI | CTAG | 6 cut(s) | 155, 182, 704, 876, 885, 1271 |
| SstI | GAGCTC | 2 cut(s) | 1227, 1488 |
| StyD4I | CCNGG | 5 cut(s) | 247, 771, 1126, 1158, 2013 |
| StyI | CCWWGG | 3 cut(s) | 606, 761, 1775 |
| TaaI | ACNGT | 4 cut(s) | 322, 425, 839, 2305 |
| TaiI | ACGT | 2 cut(s) | 378, 1922 |
| TasI | AATT | 6 cut(s) | 78, 578, 615, 1138, 1323, 1722 |
| TatI | WGTACW | 3 cut(s) | 1081, 1351, 1366 |
| TauI | GCSGC | 4 cut(s) | 798, 1652, 1733, 2093 |
| TfiI | GAWTC | 6 cut(s) | 139, 173, 913, 1095, 1985, 2122 |
| Tru1I | TTAA | 3 cut(s) | 1086, 1511, 2294 |
| Tru9I | TTAA | 3 cut(s) | 1086, 1511, 2294 |
| TscAI | CASTG | 7 cut(s) | 305, 327, 760, 825, 992, 1645, 2304 |
| TseFI | GTSAC | 1 cut(s) | 620 |
| TseI | GCWGC | 3 cut(s) | 446, 1853, 1976 |
| Tsp45I | GTSAC | 1 cut(s) | 620 |
| TspDTI | ATGAA | 6 cut(s) | 620, 715, 942, 1074, 1480, 1803 |
| TspGWI | ACGGA | 2 cut(s) | 206, 636 |
| TspRI | CASTG | 7 cut(s) | 305, 327, 760, 825, 992, 1645, 2304 |
| Van91I | CCANNNNNTGG | 3 cut(s) | 1607, 1640, 2176 |
| VpaK11BI | GGWCC | 2 cut(s) | 758, 2062 |
| XbaI | TCTAGA | 2 cut(s) | 181, 703 |
| XceI | RCATGY | 1 cut(s) | 1363 |
| XmiI | GTMKAC | 1 cut(s) | 220 |
| XspI | CTAG | 6 cut(s) | 155, 182, 704, 876, 885, 1271 |
| ZrmI | AGTACT | 1 cut(s) | 1083 |
| Zsp2I | ATGCAT | 1 cut(s) | 864 |