No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 1233 |
| Acc16I | TGCGCA | 1 cut(s) | 1392 |
| Acc36I | ACCTGC | 1 cut(s) | 1393 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 49, 1069 |
| AccII | CGCG | 8 cut(s) | 258, 260, 1259, 1299, 1363, 1385, 1422, 1452 |
| AccIII | TCCGGA | 1 cut(s) | 850 |
| AclWI | GGATC | 3 cut(s) | 212, 902, 1007 |
| AcoI | YGGCCR | 1 cut(s) | 1095 |
| AcuI | CTGAAG | 2 cut(s) | 549, 1517 |
| AcvI | CACGTG | 1 cut(s) | 1661 |
| AfaI | GTAC | 4 cut(s) | 95, 134, 801, 982 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 49, 917, 922, 1069, 1093, 1149, 1678 |
| AgsI | TTSAA | 3 cut(s) | 197, 932, 1526 |
| AjnI | CCWGG | 4 cut(s) | 138, 211, 1038, 1189 |
| Alw21I | GWGCWC | 1 cut(s) | 1273 |
| Alw26I | GTCTC | 3 cut(s) | 398, 427, 1644 |
| AlwI | GGATC | 3 cut(s) | 212, 902, 1007 |
| Ama87I | CYCGRG | 1 cut(s) | 1136 |
| Aor13HI | TCCGGA | 1 cut(s) | 850 |
| AoxI | GGCC | 6 cut(s) | 366, 1095, 1423, 1536, 1557, 1578 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 443, 475 |
| AscI | GGCGCGCC | 1 cut(s) | 1257 |
| AseI | ATTAAT | 1 cut(s) | 1368 |
| AspLEI | GCGC | 8 cut(s) | 260, 588, 724, 730, 1259, 1261, 1363, 1393 |
| AspS9I | GGNCC | 8 cut(s) | 598, 660, 736, 1235, 1515, 1537, 1558, 1579 |
| AsuC2I | CCSGG | 3 cut(s) | 741, 918, 1254 |
| AsuHPI | GGTGA | 3 cut(s) | 277, 932, 1585 |
| AsuII | TTCGAA | 1 cut(s) | 1629 |
| AsuNHI | GCTAGC | 1 cut(s) | 761 |
| AvaI | CYCGRG | 1 cut(s) | 1136 |
| AvaII | GGWCC | 5 cut(s) | 598, 660, 736, 1235, 1515 |
| AxyI | CCTNAGG | 2 cut(s) | 732, 864 |
| BanII | GRGCYC | 3 cut(s) | 364, 1143, 1273 |
| BbrPI | CACGTG | 1 cut(s) | 1661 |
| BbsI | GAAGAC | 1 cut(s) | 1041 |
| Bbv12I | GWGCWC | 1 cut(s) | 1273 |
| BbvCI | CCTCAGC | 3 cut(s) | 482, 993, 1602 |
| BccI | CCATC | 5 cut(s) | 51, 66, 193, 377, 1279 |
| BceAI | ACGGC | 1 cut(s) | 1593 |
| BcgI | CGANNNNNNTGC | 6 cut(s) | 296, 330, 443, 477, 882, 916 |
| BciT130I | CCWGG | 4 cut(s) | 140, 213, 1040, 1191 |
| BciVI | GTATCC | 1 cut(s) | 392 |
| BclI | TGATCA | 1 cut(s) | 55 |
| BcnI | CCSGG | 3 cut(s) | 741, 918, 1254 |
| BcoDI | GTCTC | 3 cut(s) | 398, 427, 1644 |
| BfaI | CTAG | 6 cut(s) | 245, 762, 1398, 1607, 1619, 1701 |
| BfmI | CTRYAG | 1 cut(s) | 1220 |
| BfoI | RGCGCY | 1 cut(s) | 731 |
| BfuAI | ACCTGC | 1 cut(s) | 1393 |
| BfuI | GTATCC | 1 cut(s) | 392 |
| BmcAI | AGTACT | 2 cut(s) | 95, 982 |
| Bme1390I | CCNGG | 7 cut(s) | 140, 213, 741, 918, 1040, 1191, 1254 |
| Bme18I | GGWCC | 5 cut(s) | 598, 660, 736, 1235, 1515 |
| BmeT110I | CYCGRG | 1 cut(s) | 1136 |
| BmgT120I | GGNCC | 8 cut(s) | 598, 660, 736, 1235, 1515, 1537, 1558, 1579 |
| BmiI | GGNNCC | 9 cut(s) | 388, 488, 600, 738, 870, 1074, 1236, 1517, 1599 |
| BmrFI | CCNGG | 7 cut(s) | 140, 213, 741, 918, 1040, 1191, 1254 |
| BmrI | ACTGGG | 1 cut(s) | 1555 |
| BmsI | GCATC | 4 cut(s) | 138, 501, 523, 844 |
| BmtI | GCTAGC | 1 cut(s) | 765 |
| BmuI | ACTGGG | 1 cut(s) | 1555 |
| BpiI | GAAGAC | 1 cut(s) | 1041 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1461, 1493 |
| BpmI | CTGGAG | 1 cut(s) | 1173 |
| Bpu10I | CCTNAGC | 4 cut(s) | 363, 482, 993, 1602 |
| Bpu14I | TTCGAA | 1 cut(s) | 1629 |
| BpuEI | CTTGAG | 5 cut(s) | 1032, 1062, 1257, 1607, 1638 |
| BpuMI | CCSGG | 3 cut(s) | 741, 918, 1254 |
| Bsa29I | ATCGAT | 1 cut(s) | 643 |
| BsaAI | YACGTR | 1 cut(s) | 1661 |
| BsaBI | GATNNNNATC | 3 cut(s) | 42, 184, 950 |
| BsaJI | CCNNGG | 3 cut(s) | 614, 739, 916 |
| BsaWI | WCCGGW | 2 cut(s) | 445, 850 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1338, 1368 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 49, 917, 922, 1069, 1093, 1149, 1678 |
| Bse118I | RCCGGY | 2 cut(s) | 657, 695 |
| Bse1I | ACTGG | 2 cut(s) | 337, 1561 |
| Bse21I | CCTNAGG | 2 cut(s) | 732, 864 |
| Bse8I | GATNNNNATC | 3 cut(s) | 42, 184, 950 |
| BseAI | TCCGGA | 1 cut(s) | 850 |
| BseBI | CCWGG | 4 cut(s) | 140, 213, 1040, 1191 |
| BseCI | ATCGAT | 1 cut(s) | 643 |
| BseDI | CCNNGG | 3 cut(s) | 614, 739, 916 |
| BseGI | GGATG | 5 cut(s) | 98, 148, 785, 859, 1720 |
| BseJI | GATNNNNATC | 3 cut(s) | 42, 184, 950 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 49, 917, 922, 1069, 1093, 1149, 1678 |
| BseNI | ACTGG | 2 cut(s) | 337, 1561 |
| BsePI | GCGCGC | 1 cut(s) | 1257 |
| BseRI | GAGGAG | 2 cut(s) | 881, 1176 |
| BseX3I | CGGCCG | 1 cut(s) | 1095 |
| BseYI | CCCAGC | 2 cut(s) | 546, 674 |
| BsgI | GTGCAG | 2 cut(s) | 864, 924 |
| Bsh1236I | CGCG | 8 cut(s) | 258, 260, 1259, 1299, 1363, 1385, 1422, 1452 |
| Bsh1285I | CGRYCG | 4 cut(s) | 235, 564, 1098, 1383 |
| BshFI | GGCC | 6 cut(s) | 368, 1097, 1425, 1538, 1559, 1580 |
| BshVI | ATCGAT | 1 cut(s) | 643 |
| BsiEI | CGRYCG | 4 cut(s) | 235, 564, 1098, 1383 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1273 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1136 |
| BsiSI | CCGG | 8 cut(s) | 446, 557, 658, 696, 741, 851, 918, 1253 |
| BslFI | GGGAC | 1 cut(s) | 1226 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 49, 917, 922, 1069, 1093, 1149, 1678 |
| BsmAI | GTCTC | 3 cut(s) | 398, 427, 1644 |
| BsmFI | GGGAC | 1 cut(s) | 1226 |
| BsmI | GAATGC | 1 cut(s) | 781 |
| BsnI | GGCC | 6 cut(s) | 368, 1097, 1425, 1538, 1559, 1580 |
| BsoBI | CYCGRG | 1 cut(s) | 1136 |
| Bsp119I | TTCGAA | 1 cut(s) | 1629 |
| Bsp1286I | GDGCHC | 3 cut(s) | 364, 1143, 1273 |
| Bsp13I | TCCGGA | 1 cut(s) | 850 |
| Bsp1407I | TGTACA | 1 cut(s) | 799 |
| Bsp143I | GATC | 9 cut(s) | 55, 217, 261, 282, 346, 640, 907, 1012, 1545 |
| Bsp19I | CCATGG | 1 cut(s) | 614 |
| Bsp68I | TCGCGA | 1 cut(s) | 1452 |
| BspANI | GGCC | 6 cut(s) | 368, 1097, 1425, 1538, 1559, 1580 |
| BspDI | ATCGAT | 1 cut(s) | 643 |
| BspEI | TCCGGA | 1 cut(s) | 850 |
| BspFNI | CGCG | 8 cut(s) | 258, 260, 1259, 1299, 1363, 1385, 1422, 1452 |
| BspLI | GGNNCC | 9 cut(s) | 388, 488, 600, 738, 870, 1074, 1236, 1517, 1599 |
| BspMAI | CTGCAG | 1 cut(s) | 1224 |
| BspMI | ACCTGC | 1 cut(s) | 1393 |
| BspOI | GCTAGC | 1 cut(s) | 765 |
| BspPI | GGATC | 3 cut(s) | 212, 902, 1007 |
| BspT104I | TTCGAA | 1 cut(s) | 1629 |
| BsrFI | RCCGGY | 2 cut(s) | 657, 695 |
| BsrGI | TGTACA | 1 cut(s) | 799 |
| BsrI | ACTGG | 2 cut(s) | 337, 1561 |
| BssAI | RCCGGY | 2 cut(s) | 657, 695 |
| BssECI | CCNNGG | 3 cut(s) | 614, 739, 916 |
| BssHII | GCGCGC | 1 cut(s) | 1257 |
| BssMI | GATC | 9 cut(s) | 55, 217, 261, 282, 346, 640, 907, 1012, 1545 |
| BssT1I | CCWWGG | 1 cut(s) | 614 |
| Bst2UI | CCWGG | 4 cut(s) | 140, 213, 1040, 1191 |
| Bst4CI | ACNGT | 1 cut(s) | 985 |
| Bst6I | CTCTTC | 2 cut(s) | 476, 558 |
| BstAUI | TGTACA | 1 cut(s) | 799 |
| BstBAI | YACGTR | 1 cut(s) | 1661 |
| BstBI | TTCGAA | 1 cut(s) | 1629 |
| BstDSI | CCRYGG | 1 cut(s) | 614 |
| BstF5I | GGATG | 5 cut(s) | 98, 148, 785, 859, 1720 |
| BstFNI | CGCG | 8 cut(s) | 258, 260, 1259, 1299, 1363, 1385, 1422, 1452 |
| BstH2I | RGCGCY | 1 cut(s) | 731 |
| BstHHI | GCGC | 8 cut(s) | 260, 588, 724, 730, 1259, 1261, 1363, 1393 |
| BstKTI | GATC | 9 cut(s) | 58, 220, 264, 285, 349, 643, 910, 1015, 1548 |
| BstMAI | GTCTC | 3 cut(s) | 398, 427, 1644 |
| BstMBI | GATC | 9 cut(s) | 55, 217, 261, 282, 346, 640, 907, 1012, 1545 |
| BstMCI | CGRYCG | 4 cut(s) | 235, 564, 1098, 1383 |
| BstNI | CCWGG | 4 cut(s) | 140, 213, 1040, 1191 |
| BstNSI | RCATGY | 1 cut(s) | 674 |
| BstSCI | CCNGG | 7 cut(s) | 138, 211, 739, 916, 1038, 1189, 1252 |
| BstSFI | CTRYAG | 1 cut(s) | 1220 |
| BstUI | CGCG | 8 cut(s) | 258, 260, 1259, 1299, 1363, 1385, 1422, 1452 |
| BstV2I | GAAGAC | 1 cut(s) | 1041 |
| BstZI | CGGCCG | 1 cut(s) | 1095 |
| Bsu15I | ATCGAT | 1 cut(s) | 643 |
| Bsu36I | CCTNAGG | 2 cut(s) | 732, 864 |
| BsuI | GTATCC | 1 cut(s) | 392 |
| BsuRI | GGCC | 6 cut(s) | 368, 1097, 1425, 1538, 1559, 1580 |
| BsuTUI | ATCGAT | 1 cut(s) | 643 |
| BtgI | CCRYGG | 1 cut(s) | 614 |
| BtgZI | GCGATG | 1 cut(s) | 789 |
| BtsCI | GGATG | 5 cut(s) | 98, 148, 785, 859, 1720 |
| BtsIMutI | CAGTG | 4 cut(s) | 122, 606, 636, 1311 |
| BtuMI | TCGCGA | 1 cut(s) | 1452 |
| BveI | ACCTGC | 1 cut(s) | 1393 |
| CciNI | GCGGCCGC | 1 cut(s) | 1095 |
| CfoI | GCGC | 8 cut(s) | 260, 588, 724, 730, 1259, 1261, 1363, 1393 |
| Cfr10I | RCCGGY | 2 cut(s) | 657, 695 |
| Cfr13I | GGNCC | 8 cut(s) | 598, 660, 736, 1235, 1515, 1537, 1558, 1579 |
| ClaI | ATCGAT | 1 cut(s) | 643 |
| CseI | GACGC | 2 cut(s) | 383, 1706 |
| CsiI | ACCWGGT | 1 cut(s) | 1038 |
| Csp6I | GTAC | 4 cut(s) | 94, 133, 800, 981 |
| CviAII | CATG | 3 cut(s) | 615, 671, 1739 |
| CviQI | GTAC | 4 cut(s) | 94, 133, 800, 981 |
| DpnI | GATC | 9 cut(s) | 57, 219, 263, 284, 348, 642, 909, 1014, 1547 |
| DpnII | GATC | 9 cut(s) | 55, 217, 261, 282, 346, 640, 907, 1012, 1545 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 1233 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 1233 |
| EaeI | YGGCCR | 1 cut(s) | 1095 |
| EagI | CGGCCG | 1 cut(s) | 1095 |
| Eam1104I | CTCTTC | 2 cut(s) | 476, 558 |
| EarI | CTCTTC | 2 cut(s) | 476, 558 |
| Ecl136II | GAGCTC | 1 cut(s) | 1271 |
| EclXI | CGGCCG | 1 cut(s) | 1095 |
| Eco130I | CCWWGG | 1 cut(s) | 614 |
| Eco24I | GRGCYC | 3 cut(s) | 364, 1143, 1273 |
| Eco47I | GGWCC | 5 cut(s) | 598, 660, 736, 1235, 1515 |
| Eco52I | CGGCCG | 1 cut(s) | 1095 |
| Eco53kI | GAGCTC | 1 cut(s) | 1271 |
| Eco57I | CTGAAG | 2 cut(s) | 549, 1517 |
| Eco72I | CACGTG | 1 cut(s) | 1661 |
| Eco81I | CCTNAGG | 2 cut(s) | 732, 864 |
| Eco88I | CYCGRG | 1 cut(s) | 1136 |
| EcoICRI | GAGCTC | 1 cut(s) | 1271 |
| EcoO109I | RGGNCCY | 2 cut(s) | 736, 1235 |
| EcoRII | CCWGG | 4 cut(s) | 138, 211, 1038, 1189 |
| EcoT14I | CCWWGG | 1 cut(s) | 614 |
| EcoT38I | GRGCYC | 3 cut(s) | 364, 1143, 1273 |
| ErhI | CCWWGG | 1 cut(s) | 614 |
| FaeI | CATG | 3 cut(s) | 618, 674, 1742 |
| FaqI | GGGAC | 1 cut(s) | 1226 |
| FatI | CATG | 3 cut(s) | 614, 670, 1738 |
| FauI | CCCGC | 2 cut(s) | 341, 1735 |
| FbaI | TGATCA | 1 cut(s) | 55 |
| FokI | GGATG | 5 cut(s) | 85, 155, 772, 866, 1727 |
| FriOI | GRGCYC | 3 cut(s) | 364, 1143, 1273 |
| FspBI | CTAG | 6 cut(s) | 245, 762, 1398, 1607, 1619, 1701 |
| FspI | TGCGCA | 1 cut(s) | 1392 |
| GlaI | GCGC | 8 cut(s) | 259, 587, 723, 729, 1258, 1260, 1362, 1392 |
| GsaI | CCCAGC | 2 cut(s) | 550, 678 |
| GsuI | CTGGAG | 1 cut(s) | 1173 |
| HaeII | RGCGCY | 1 cut(s) | 731 |
| HaeIII | GGCC | 6 cut(s) | 368, 1097, 1425, 1538, 1559, 1580 |
| HapII | CCGG | 8 cut(s) | 446, 557, 658, 696, 741, 851, 918, 1253 |
| HgaI | GACGC | 2 cut(s) | 383, 1706 |
| HhaI | GCGC | 8 cut(s) | 260, 588, 724, 730, 1259, 1261, 1363, 1393 |
| Hin1II | CATG | 3 cut(s) | 618, 674, 1742 |
| Hin6I | GCGC | 8 cut(s) | 258, 586, 722, 728, 1257, 1259, 1361, 1391 |
| HinP1I | GCGC | 8 cut(s) | 258, 586, 722, 728, 1257, 1259, 1361, 1391 |
| HinfI | GANTC | 5 cut(s) | 38, 180, 439, 793, 1454 |
| HpaII | CCGG | 8 cut(s) | 446, 557, 658, 696, 741, 851, 918, 1253 |
| HphI | GGTGA | 3 cut(s) | 277, 932, 1585 |
| Hpy166II | GTNNAC | 1 cut(s) | 382 |
| Hpy188I | TCNGA | 5 cut(s) | 274, 476, 529, 598, 1673 |
| Hpy8I | GTNNAC | 1 cut(s) | 382 |
| Hpy99I | CGWCG | 5 cut(s) | 377, 455, 657, 962, 1700 |
| HpyAV | CCTTC | 4 cut(s) | 389, 674, 857, 1636 |
| HpyCH4III | ACNGT | 1 cut(s) | 985 |
| HpyCH4IV | ACGT | 1 cut(s) | 1660 |
| HpyCH4V | TGCA | 9 cut(s) | 464, 539, 781, 842, 857, 881, 941, 1222, 1430 |
| HpySE526I | ACGT | 1 cut(s) | 1660 |
| Hsp92II | CATG | 3 cut(s) | 618, 674, 1742 |
| HspAI | GCGC | 8 cut(s) | 258, 586, 722, 728, 1257, 1259, 1361, 1391 |
| Kpn2I | TCCGGA | 1 cut(s) | 850 |
| Ksp22I | TGATCA | 1 cut(s) | 55 |
| Kzo9I | GATC | 9 cut(s) | 55, 217, 261, 282, 346, 640, 907, 1012, 1545 |
| LmnI | GCTCC | 4 cut(s) | 868, 1063, 1189, 1681 |
| LweI | GCATC | 4 cut(s) | 138, 501, 523, 844 |
| MabI | ACCWGGT | 1 cut(s) | 1038 |
| MaeI | CTAG | 6 cut(s) | 245, 762, 1398, 1607, 1619, 1701 |
| MaeII | ACGT | 1 cut(s) | 1660 |
| MaeIII | GTNAC | 1 cut(s) | 1573 |
| MalI | GATC | 9 cut(s) | 57, 219, 263, 284, 348, 642, 909, 1014, 1547 |
| MboI | GATC | 9 cut(s) | 55, 217, 261, 282, 346, 640, 907, 1012, 1545 |
| MfeI | CAATTG | 3 cut(s) | 430, 1026, 1541 |
| MhlI | GDGCHC | 3 cut(s) | 364, 1143, 1273 |
| MluCI | AATT | 6 cut(s) | 23, 165, 430, 1026, 1541, 1566 |
| MlyI | GAGTC | 2 cut(s) | 433, 1448 |
| MmeI | TCCRAC | 1 cut(s) | 1696 |
| MroI | TCCGGA | 1 cut(s) | 850 |
| MseI | TTAA | 2 cut(s) | 1368, 1565 |
| MspA1I | CMGCKG | 3 cut(s) | 569, 591, 1100 |
| MspI | CCGG | 8 cut(s) | 446, 557, 658, 696, 741, 851, 918, 1253 |
| MspR9I | CCNGG | 7 cut(s) | 140, 213, 741, 918, 1040, 1191, 1254 |
| MunI | CAATTG | 3 cut(s) | 430, 1026, 1541 |
| Mva1269I | GAATGC | 1 cut(s) | 781 |
| MvaI | CCWGG | 4 cut(s) | 140, 213, 1040, 1191 |
| MvnI | CGCG | 8 cut(s) | 258, 260, 1259, 1299, 1363, 1385, 1422, 1452 |
| NciI | CCSGG | 3 cut(s) | 741, 918, 1254 |
| NcoI | CCATGG | 1 cut(s) | 614 |
| NdeII | GATC | 9 cut(s) | 55, 217, 261, 282, 346, 640, 907, 1012, 1545 |
| NheI | GCTAGC | 1 cut(s) | 761 |
| NlaIII | CATG | 3 cut(s) | 618, 674, 1742 |
| NlaIV | GGNNCC | 9 cut(s) | 388, 488, 600, 738, 870, 1074, 1236, 1517, 1599 |
| NmuCI | GTSAC | 1 cut(s) | 1573 |
| NotI | GCGGCCGC | 1 cut(s) | 1095 |
| NruI | TCGCGA | 1 cut(s) | 1452 |
| NsbI | TGCGCA | 1 cut(s) | 1392 |
| NspI | RCATGY | 1 cut(s) | 674 |
| NspV | TTCGAA | 1 cut(s) | 1629 |
| PaeI | GCATGC | 1 cut(s) | 674 |
| PalAI | GGCGCGCC | 1 cut(s) | 1257 |
| PauI | GCGCGC | 1 cut(s) | 1257 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 649, 1300 |
| PctI | GAATGC | 1 cut(s) | 781 |
| PfeI | GAWTC | 3 cut(s) | 38, 180, 793 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 49, 1069 |
| PfoI | TCCNGGA | 2 cut(s) | 138, 1189 |
| PleI | GAGTC | 2 cut(s) | 433, 1448 |
| PmaCI | CACGTG | 1 cut(s) | 1661 |
| PmlI | CACGTG | 1 cut(s) | 1661 |
| PpsI | GAGTC | 2 cut(s) | 433, 1448 |
| Ppu21I | YACGTR | 1 cut(s) | 1661 |
| PpuMI | RGGWCCY | 2 cut(s) | 736, 1235 |
| PshBI | ATTAAT | 1 cut(s) | 1368 |
| Psp124BI | GAGCTC | 1 cut(s) | 1273 |
| Psp5II | RGGWCCY | 2 cut(s) | 736, 1235 |
| Psp6I | CCWGG | 4 cut(s) | 138, 211, 1038, 1189 |
| PspCI | CACGTG | 1 cut(s) | 1661 |
| PspFI | CCCAGC | 2 cut(s) | 546, 674 |
| PspGI | CCWGG | 4 cut(s) | 138, 211, 1038, 1189 |
| PspN4I | GGNNCC | 9 cut(s) | 388, 488, 600, 738, 870, 1074, 1236, 1517, 1599 |
| PspPI | GGNCC | 8 cut(s) | 598, 660, 736, 1235, 1515, 1537, 1558, 1579 |
| PspPPI | RGGWCCY | 2 cut(s) | 736, 1235 |
| PstI | CTGCAG | 1 cut(s) | 1224 |
| PteI | GCGCGC | 1 cut(s) | 1257 |
| PvuII | CAGCTG | 1 cut(s) | 569 |
| RruI | TCGCGA | 1 cut(s) | 1452 |
| RsaI | GTAC | 4 cut(s) | 95, 134, 801, 982 |
| RsaNI | GTAC | 4 cut(s) | 94, 133, 800, 981 |
| SacI | GAGCTC | 1 cut(s) | 1273 |
| SaqAI | TTAA | 2 cut(s) | 1368, 1565 |
| Sau3AI | GATC | 9 cut(s) | 55, 217, 261, 282, 346, 640, 907, 1012, 1545 |
| Sau96I | GGNCC | 8 cut(s) | 598, 660, 736, 1235, 1515, 1537, 1558, 1579 |
| ScaI | AGTACT | 2 cut(s) | 95, 982 |
| SchI | GAGTC | 2 cut(s) | 433, 1448 |
| ScrFI | CCNGG | 7 cut(s) | 140, 213, 741, 918, 1040, 1191, 1254 |
| SduI | GDGCHC | 3 cut(s) | 364, 1143, 1273 |
| SexAI | ACCWGGT | 1 cut(s) | 1038 |
| SfaNI | GCATC | 4 cut(s) | 138, 501, 523, 844 |
| SfcI | CTRYAG | 1 cut(s) | 1220 |
| SfuI | TTCGAA | 1 cut(s) | 1629 |
| SgsI | GGCGCGCC | 1 cut(s) | 1257 |
| SinI | GGWCC | 5 cut(s) | 598, 660, 736, 1235, 1515 |
| SmlI | CTYRAG | 5 cut(s) | 1047, 1077, 1272, 1586, 1653 |
| SmoI | CTYRAG | 5 cut(s) | 1047, 1077, 1272, 1586, 1653 |
| SphI | GCATGC | 1 cut(s) | 674 |
| Sse9I | AATT | 6 cut(s) | 23, 165, 430, 1026, 1541, 1566 |
| SspI | AATATT | 1 cut(s) | 1280 |
| SspMI | CTAG | 6 cut(s) | 245, 762, 1398, 1607, 1619, 1701 |
| SstI | GAGCTC | 1 cut(s) | 1273 |
| StyD4I | CCNGG | 7 cut(s) | 138, 211, 739, 916, 1038, 1189, 1252 |
| StyI | CCWWGG | 1 cut(s) | 614 |
| TaaI | ACNGT | 1 cut(s) | 985 |
| TaiI | ACGT | 1 cut(s) | 1663 |
| TasI | AATT | 6 cut(s) | 23, 165, 430, 1026, 1541, 1566 |
| TatI | WGTACW | 3 cut(s) | 93, 799, 980 |
| TauI | GCSGC | 6 cut(s) | 258, 594, 1097, 1100, 1299, 1425 |
| TfiI | GAWTC | 3 cut(s) | 38, 180, 793 |
| Tru1I | TTAA | 2 cut(s) | 1368, 1565 |
| Tru9I | TTAA | 2 cut(s) | 1368, 1565 |
| TscAI | CASTG | 4 cut(s) | 122, 613, 643, 1318 |
| TseFI | GTSAC | 1 cut(s) | 1573 |
| Tsp45I | GTSAC | 1 cut(s) | 1573 |
| TspDTI | ATGAA | 6 cut(s) | 642, 774, 1047, 1218, 1386, 1731 |
| TspGWI | ACGGA | 2 cut(s) | 399, 415 |
| TspRI | CASTG | 4 cut(s) | 122, 613, 643, 1318 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 49, 1069 |
| VpaK11BI | GGWCC | 5 cut(s) | 598, 660, 736, 1235, 1515 |
| VspI | ATTAAT | 1 cut(s) | 1368 |
| XceI | RCATGY | 1 cut(s) | 674 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 376, 643 |
| XspI | CTAG | 6 cut(s) | 245, 762, 1398, 1607, 1619, 1701 |
| ZrmI | AGTACT | 2 cut(s) | 95, 982 |