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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 1083 |
| AatII | GACGTC | 1 cut(s) | 783 |
| Acc36I | ACCTGC | 3 cut(s) | 450, 859, 1243 |
| AccIII | TCCGGA | 1 cut(s) | 646 |
| AclWI | GGATC | 5 cut(s) | 332, 659, 672, 1223, 1344 |
| AcoI | YGGCCR | 2 cut(s) | 169, 1230 |
| AcsI | RAATTY | 1 cut(s) | 1172 |
| AcuI | CTGAAG | 3 cut(s) | 474, 993, 1185 |
| AcyI | GRCGYC | 1 cut(s) | 780 |
| AfaI | GTAC | 4 cut(s) | 228, 894, 1140, 1156 |
| AfeI | AGCGCT | 1 cut(s) | 690 |
| AfiI | CCNNNNNNNGG | 9 cut(s) | 149, 167, 200, 347, 504, 790, 872, 932, 1375 |
| AflII | CTTAAG | 1 cut(s) | 1468 |
| AgeI | ACCGGT | 1 cut(s) | 193 |
| AgsI | TTSAA | 1 cut(s) | 1181 |
| AjnI | CCWGG | 7 cut(s) | 166, 341, 502, 858, 1039, 1080, 1247 |
| AluBI | AGCT | 8 cut(s) | 101, 245, 494, 725, 1112, 1121, 1192, 1554 |
| AluI | AGCT | 8 cut(s) | 101, 245, 494, 725, 1112, 1121, 1192, 1554 |
| Alw21I | GWGCWC | 4 cut(s) | 103, 1123, 1194, 1572 |
| Alw26I | GTCTC | 2 cut(s) | 754, 1494 |
| AlwI | GGATC | 5 cut(s) | 332, 659, 672, 1223, 1344 |
| Aor13HI | TCCGGA | 1 cut(s) | 646 |
| Aor51HI | AGCGCT | 1 cut(s) | 690 |
| AoxI | GGCC | 9 cut(s) | 169, 760, 934, 1230, 1236, 1245, 1273, 1407, 1428 |
| ApaI | GGGCCC | 1 cut(s) | 764 |
| ApeKI | GCWGC | 9 cut(s) | 296, 494, 941, 944, 1072, 1109, 1112, 1538, 1541 |
| ApoI | RAATTY | 1 cut(s) | 1172 |
| AsiGI | ACCGGT | 1 cut(s) | 193 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 549, 978, 1518 |
| AspS9I | GGNCC | 9 cut(s) | 539, 760, 761, 935, 1085, 1365, 1378, 1408, 1429 |
| AsuC2I | CCSGG | 1 cut(s) | 1104 |
| AsuHPI | GGTGA | 2 cut(s) | 183, 690 |
| AsuNHI | GCTAGC | 1 cut(s) | 1550 |
| AvaII | GGWCC | 4 cut(s) | 539, 1085, 1365, 1378 |
| BaeGI | GKGCMC | 1 cut(s) | 764 |
| BamHI | GGATCC | 1 cut(s) | 664 |
| BanII | GRGCYC | 5 cut(s) | 103, 764, 822, 1123, 1194 |
| BauI | CACGAG | 1 cut(s) | 519 |
| Bbv12I | GWGCWC | 4 cut(s) | 103, 1123, 1194, 1572 |
| BbvCI | CCTCAGC | 2 cut(s) | 246, 789 |
| BbvI | GCAGC | 9 cut(s) | 283, 481, 928, 931, 1084, 1099, 1121, 1525, 1528 |
| BccI | CCATC | 4 cut(s) | 566, 688, 1129, 1166 |
| BceAI | ACGGC | 5 cut(s) | 23, 46, 875, 1245, 1443 |
| BcgI | CGANNNNNNTGC | 6 cut(s) | 35, 45, 69, 79, 1559, 1593 |
| BciT130I | CCWGG | 7 cut(s) | 168, 343, 504, 860, 1041, 1082, 1249 |
| BcnI | CCSGG | 1 cut(s) | 1104 |
| BcoDI | GTCTC | 2 cut(s) | 754, 1494 |
| BfaI | CTAG | 2 cut(s) | 1310, 1551 |
| BfmI | CTRYAG | 3 cut(s) | 240, 300, 1070 |
| BfoI | RGCGCY | 2 cut(s) | 527, 692 |
| BfrI | CTTAAG | 1 cut(s) | 1468 |
| BfuAI | ACCTGC | 3 cut(s) | 450, 859, 1243 |
| BglI | GCCNNNNNGGC | 3 cut(s) | 860, 1244, 1436 |
| BlpI | GCTNAGC | 2 cut(s) | 580, 816 |
| BmcAI | AGTACT | 1 cut(s) | 228 |
| Bme1390I | CCNGG | 8 cut(s) | 168, 343, 504, 860, 1041, 1082, 1104, 1249 |
| Bme18I | GGWCC | 4 cut(s) | 539, 1085, 1365, 1378 |
| BmgT120I | GGNCC | 9 cut(s) | 539, 760, 761, 935, 1085, 1365, 1378, 1408, 1429 |
| BmrFI | CCNGG | 8 cut(s) | 168, 343, 504, 860, 1041, 1082, 1104, 1249 |
| BmrI | ACTGGG | 1 cut(s) | 219 |
| BmsI | GCATC | 7 cut(s) | 76, 132, 172, 640, 784, 946, 1353 |
| BmtI | GCTAGC | 1 cut(s) | 1554 |
| BmuI | ACTGGG | 1 cut(s) | 219 |
| BpmI | CTGGAG | 4 cut(s) | 129, 486, 849, 1023 |
| Bpu10I | CCTNAGC | 3 cut(s) | 246, 789, 987 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 580, 816 |
| BpuEI | CTTGAG | 4 cut(s) | 711, 912, 1107, 1488 |
| BpuMI | CCSGG | 1 cut(s) | 1104 |
| BsaHI | GRCGYC | 1 cut(s) | 780 |
| BsaJI | CCNNGG | 8 cut(s) | 341, 342, 503, 858, 1040, 1081, 1233, 1404 |
| BsaWI | WCCGGW | 2 cut(s) | 193, 646 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 85, 115, 380, 410 |
| Bsc4I | CCNNNNNNNGG | 9 cut(s) | 149, 167, 200, 347, 504, 790, 872, 932, 1375 |
| Bse118I | RCCGGY | 2 cut(s) | 119, 193 |
| Bse1I | ACTGG | 3 cut(s) | 214, 378, 1440 |
| BseAI | TCCGGA | 1 cut(s) | 646 |
| BseBI | CCWGG | 7 cut(s) | 168, 343, 504, 860, 1041, 1082, 1249 |
| BseDI | CCNNGG | 8 cut(s) | 341, 342, 503, 858, 1040, 1081, 1233, 1404 |
| BseGI | GGATG | 6 cut(s) | 163, 655, 680, 799, 963, 1570 |
| BseLI | CCNNNNNNNGG | 9 cut(s) | 149, 167, 200, 347, 504, 790, 872, 932, 1375 |
| BseMII | CTCAG | 8 cut(s) | 237, 336, 594, 780, 807, 978, 1466, 1505 |
| BseNI | ACTGG | 3 cut(s) | 214, 378, 1440 |
| BsePI | GCGCGC | 2 cut(s) | 1508, 1534 |
| BseRI | GAGGAG | 3 cut(s) | 93, 1026, 1460 |
| BseSI | GKGCMC | 1 cut(s) | 764 |
| BseX3I | CGGCCG | 1 cut(s) | 1230 |
| BseXI | GCAGC | 9 cut(s) | 283, 481, 928, 931, 1084, 1099, 1121, 1525, 1528 |
| BseYI | CCCAGC | 2 cut(s) | 476, 685 |
| BsgI | GTGCAG | 1 cut(s) | 1194 |
| Bsh1285I | CGRYCG | 4 cut(s) | 198, 672, 1233, 1318 |
| BshFI | GGCC | 9 cut(s) | 171, 762, 936, 1232, 1238, 1247, 1275, 1409, 1430 |
| BshTI | ACCGGT | 1 cut(s) | 193 |
| BsiEI | CGRYCG | 4 cut(s) | 198, 672, 1233, 1318 |
| BsiHKAI | GWGCWC | 4 cut(s) | 103, 1123, 1194, 1572 |
| BsiSI | CCGG | 5 cut(s) | 120, 194, 647, 1103, 1116 |
| BslFI | GGGAC | 4 cut(s) | 520, 552, 767, 1076 |
| BslI | CCNNNNNNNGG | 9 cut(s) | 149, 167, 200, 347, 504, 790, 872, 932, 1375 |
| BsmAI | GTCTC | 2 cut(s) | 754, 1494 |
| BsmFI | GGGAC | 4 cut(s) | 520, 552, 767, 1076 |
| BsmI | GAATGC | 2 cut(s) | 58, 640 |
| BsnI | GGCC | 9 cut(s) | 171, 762, 936, 1232, 1238, 1247, 1275, 1409, 1430 |
| Bsp120I | GGGCCC | 1 cut(s) | 760 |
| Bsp1286I | GDGCHC | 6 cut(s) | 103, 764, 822, 1123, 1194, 1572 |
| Bsp13I | TCCGGA | 1 cut(s) | 646 |
| Bsp143I | GATC | 6 cut(s) | 337, 664, 669, 1215, 1315, 1336 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 580, 816 |
| Bsp68I | TCGCGA | 1 cut(s) | 1302 |
| BspANI | GGCC | 9 cut(s) | 171, 762, 936, 1232, 1238, 1247, 1275, 1409, 1430 |
| BspCNI | CTCAG | 8 cut(s) | 238, 335, 593, 781, 808, 979, 1465, 1504 |
| BspEI | TCCGGA | 1 cut(s) | 646 |
| BspMAI | CTGCAG | 1 cut(s) | 1074 |
| BspMI | ACCTGC | 3 cut(s) | 450, 859, 1243 |
| BspOI | GCTAGC | 1 cut(s) | 1554 |
| BspPI | GGATC | 5 cut(s) | 332, 659, 672, 1223, 1344 |
| BspTI | CTTAAG | 1 cut(s) | 1468 |
| BsrFI | RCCGGY | 2 cut(s) | 119, 193 |
| BsrI | ACTGG | 3 cut(s) | 214, 378, 1440 |
| BssAI | RCCGGY | 2 cut(s) | 119, 193 |
| BssECI | CCNNGG | 8 cut(s) | 341, 342, 503, 858, 1040, 1081, 1233, 1404 |
| BssHII | GCGCGC | 2 cut(s) | 1508, 1534 |
| BssMI | GATC | 6 cut(s) | 337, 664, 669, 1215, 1315, 1336 |
| BssNI | GRCGYC | 1 cut(s) | 780 |
| BssSI | CACGAG | 1 cut(s) | 519 |
| BssT1I | CCWWGG | 1 cut(s) | 1404 |
| Bst2BI | CACGAG | 1 cut(s) | 519 |
| Bst2UI | CCWGG | 7 cut(s) | 168, 343, 504, 860, 1041, 1082, 1249 |
| Bst4CI | ACNGT | 3 cut(s) | 185, 289, 1423 |
| Bst6I | CTCTTC | 2 cut(s) | 624, 648 |
| BstACI | GRCGYC | 1 cut(s) | 780 |
| BstAFI | CTTAAG | 1 cut(s) | 1468 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 230 |
| BstDEI | CTNAG | 9 cut(s) | 246, 322, 580, 789, 816, 987, 1340, 1452, 1491 |
| BstDSI | CCRYGG | 1 cut(s) | 1233 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 147 |
| BstF5I | GGATG | 6 cut(s) | 163, 655, 680, 799, 963, 1570 |
| BstH2I | RGCGCY | 2 cut(s) | 527, 692 |
| BstKTI | GATC | 6 cut(s) | 340, 667, 672, 1218, 1318, 1339 |
| BstMAI | GTCTC | 2 cut(s) | 754, 1494 |
| BstMBI | GATC | 6 cut(s) | 337, 664, 669, 1215, 1315, 1336 |
| BstMCI | CGRYCG | 4 cut(s) | 198, 672, 1233, 1318 |
| BstNI | CCWGG | 7 cut(s) | 168, 343, 504, 860, 1041, 1082, 1249 |
| BstNSI | RCATGY | 1 cut(s) | 14 |
| BstSCI | CCNGG | 8 cut(s) | 166, 341, 502, 858, 1039, 1080, 1102, 1247 |
| BstSFI | CTRYAG | 3 cut(s) | 240, 300, 1070 |
| BstSLI | GKGCMC | 1 cut(s) | 764 |
| BstV1I | GCAGC | 9 cut(s) | 283, 481, 928, 931, 1084, 1099, 1121, 1525, 1528 |
| BstX2I | RGATCY | 2 cut(s) | 664, 1336 |
| BstYI | RGATCY | 2 cut(s) | 664, 1336 |
| BstZI | CGGCCG | 1 cut(s) | 1230 |
| BsuRI | GGCC | 9 cut(s) | 171, 762, 936, 1232, 1238, 1247, 1275, 1409, 1430 |
| BtgI | CCRYGG | 1 cut(s) | 1233 |
| BtgZI | GCGATG | 1 cut(s) | 1499 |
| BtsCI | GGATG | 6 cut(s) | 163, 655, 680, 799, 963, 1570 |
| BtsIMutI | CAGTG | 3 cut(s) | 190, 567, 1161 |
| BtuMI | TCGCGA | 1 cut(s) | 1302 |
| BveI | ACCTGC | 3 cut(s) | 450, 859, 1243 |
| Cfr10I | RCCGGY | 2 cut(s) | 119, 193 |
| Cfr13I | GGNCC | 9 cut(s) | 539, 760, 761, 935, 1085, 1365, 1378, 1408, 1429 |
| Cfr42I | CCGCGG | 1 cut(s) | 1236 |
| CseI | GACGC | 4 cut(s) | 245, 684, 1318, 1556 |
| Csp6I | GTAC | 4 cut(s) | 227, 893, 1139, 1155 |
| CspAI | ACCGGT | 1 cut(s) | 193 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 516, 551 |
| CviAII | CATG | 3 cut(s) | 11, 659, 1589 |
| CviQI | GTAC | 4 cut(s) | 227, 893, 1139, 1155 |
| DdeI | CTNAG | 9 cut(s) | 246, 322, 580, 789, 816, 987, 1340, 1452, 1491 |
| DpnI | GATC | 6 cut(s) | 339, 666, 671, 1217, 1317, 1338 |
| DpnII | GATC | 6 cut(s) | 337, 664, 669, 1215, 1315, 1336 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 1083 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 1083 |
| EaeI | YGGCCR | 2 cut(s) | 169, 1230 |
| EagI | CGGCCG | 1 cut(s) | 1230 |
| Eam1104I | CTCTTC | 2 cut(s) | 624, 648 |
| EarI | CTCTTC | 2 cut(s) | 624, 648 |
| Ecl136II | GAGCTC | 3 cut(s) | 101, 1121, 1192 |
| EclXI | CGGCCG | 1 cut(s) | 1230 |
| Eco130I | CCWWGG | 1 cut(s) | 1404 |
| Eco24I | GRGCYC | 5 cut(s) | 103, 764, 822, 1123, 1194 |
| Eco47I | GGWCC | 4 cut(s) | 539, 1085, 1365, 1378 |
| Eco47III | AGCGCT | 1 cut(s) | 690 |
| Eco52I | CGGCCG | 1 cut(s) | 1230 |
| Eco53kI | GAGCTC | 3 cut(s) | 101, 1121, 1192 |
| Eco57I | CTGAAG | 3 cut(s) | 474, 993, 1185 |
| EcoICRI | GAGCTC | 3 cut(s) | 101, 1121, 1192 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 147 |
| EcoO109I | RGGNCCY | 5 cut(s) | 539, 760, 761, 1085, 1378 |
| EcoRII | CCWGG | 7 cut(s) | 166, 341, 502, 858, 1039, 1080, 1247 |
| EcoT14I | CCWWGG | 1 cut(s) | 1404 |
| EcoT38I | GRGCYC | 5 cut(s) | 103, 764, 822, 1123, 1194 |
| ErhI | CCWWGG | 1 cut(s) | 1404 |
| FaeI | CATG | 3 cut(s) | 14, 662, 1592 |
| FaqI | GGGAC | 4 cut(s) | 520, 552, 767, 1076 |
| FatI | CATG | 3 cut(s) | 10, 658, 1588 |
| FauI | CCCGC | 4 cut(s) | 314, 748, 829, 1585 |
| FauNDI | CATATG | 1 cut(s) | 472 |
| FokI | GGATG | 6 cut(s) | 150, 662, 667, 806, 950, 1577 |
| FriOI | GRGCYC | 5 cut(s) | 103, 764, 822, 1123, 1194 |
| FspBI | CTAG | 2 cut(s) | 1310, 1551 |
| GsaI | CCCAGC | 2 cut(s) | 480, 689 |
| GsuI | CTGGAG | 4 cut(s) | 129, 486, 849, 1023 |
| HaeII | RGCGCY | 2 cut(s) | 527, 692 |
| HaeIII | GGCC | 9 cut(s) | 171, 762, 936, 1232, 1238, 1247, 1275, 1409, 1430 |
| HapII | CCGG | 5 cut(s) | 120, 194, 647, 1103, 1116 |
| HgaI | GACGC | 4 cut(s) | 245, 684, 1318, 1556 |
| Hin1I | GRCGYC | 1 cut(s) | 780 |
| Hin1II | CATG | 3 cut(s) | 14, 662, 1592 |
| HinfI | GANTC | 5 cut(s) | 251, 841, 1077, 1304, 1324 |
| HpaII | CCGG | 5 cut(s) | 120, 194, 647, 1103, 1116 |
| HphI | GGTGA | 2 cut(s) | 183, 690 |
| Hpy166II | GTNNAC | 1 cut(s) | 137 |
| Hpy188I | TCNGA | 9 cut(s) | 89, 265, 325, 619, 669, 1134, 1365, 1455, 1494 |
| Hpy8I | GTNNAC | 1 cut(s) | 137 |
| Hpy99I | CGWCG | 7 cut(s) | 9, 50, 67, 272, 275, 459, 1550 |
| HpyAV | CCTTC | 7 cut(s) | 143, 214, 341, 447, 476, 824, 1370 |
| HpyCH4III | ACNGT | 3 cut(s) | 185, 289, 1423 |
| HpyCH4IV | ACGT | 2 cut(s) | 780, 1153 |
| HpyF3I | CTNAG | 9 cut(s) | 246, 322, 580, 789, 816, 987, 1340, 1452, 1491 |
| HpySE526I | ACGT | 2 cut(s) | 780, 1153 |
| Hsp92I | GRCGYC | 1 cut(s) | 780 |
| Hsp92II | CATG | 3 cut(s) | 14, 662, 1592 |
| Kpn2I | TCCGGA | 1 cut(s) | 646 |
| KroI | GCCGGC | 1 cut(s) | 119 |
| KroNI | GCCGGC | 1 cut(s) | 121 |
| KspI | CCGCGG | 1 cut(s) | 1236 |
| Kzo9I | GATC | 6 cut(s) | 337, 664, 669, 1215, 1315, 1336 |
| LmnI | GCTCC | 7 cut(s) | 106, 388, 868, 916, 1039, 1118, 1447 |
| Lsp1109I | GCAGC | 9 cut(s) | 283, 481, 928, 931, 1084, 1099, 1121, 1525, 1528 |
| LweI | GCATC | 7 cut(s) | 76, 132, 172, 640, 784, 946, 1353 |
| MaeI | CTAG | 2 cut(s) | 1310, 1551 |
| MaeII | ACGT | 2 cut(s) | 780, 1153 |
| MaeIII | GTNAC | 4 cut(s) | 696, 776, 1417, 1423 |
| MalI | GATC | 6 cut(s) | 339, 666, 671, 1217, 1317, 1338 |
| MboI | GATC | 6 cut(s) | 337, 664, 669, 1215, 1315, 1336 |
| MfeI | CAATTG | 1 cut(s) | 27 |
| MflI | RGATCY | 2 cut(s) | 664, 1336 |
| MhlI | GDGCHC | 6 cut(s) | 103, 764, 822, 1123, 1194, 1572 |
| MluCI | AATT | 5 cut(s) | 27, 129, 402, 1172, 1412 |
| MlyI | GAGTC | 2 cut(s) | 1071, 1298 |
| MmeI | TCCRAC | 1 cut(s) | 378 |
| MroI | TCCGGA | 1 cut(s) | 646 |
| MroNI | GCCGGC | 1 cut(s) | 119 |
| MroXI | GAANNNNTTC | 3 cut(s) | 549, 978, 1518 |
| MseI | TTAA | 1 cut(s) | 1469 |
| MslI | CAYNNNNRTG | 1 cut(s) | 15 |
| MspA1I | CMGCKG | 5 cut(s) | 245, 494, 800, 1112, 1235 |
| MspCI | CTTAAG | 1 cut(s) | 1468 |
| MspI | CCGG | 5 cut(s) | 120, 194, 647, 1103, 1116 |
| MspR9I | CCNGG | 8 cut(s) | 168, 343, 504, 860, 1041, 1082, 1104, 1249 |
| MunI | CAATTG | 1 cut(s) | 27 |
| Mva1269I | GAATGC | 2 cut(s) | 58, 640 |
| MvaI | CCWGG | 7 cut(s) | 168, 343, 504, 860, 1041, 1082, 1249 |
| NaeI | GCCGGC | 1 cut(s) | 121 |
| NciI | CCSGG | 1 cut(s) | 1104 |
| NdeI | CATATG | 1 cut(s) | 472 |
| NdeII | GATC | 6 cut(s) | 337, 664, 669, 1215, 1315, 1336 |
| NgoMIV | GCCGGC | 1 cut(s) | 119 |
| NheI | GCTAGC | 1 cut(s) | 1550 |
| NlaIII | CATG | 3 cut(s) | 14, 662, 1592 |
| NmuCI | GTSAC | 4 cut(s) | 696, 776, 1417, 1423 |
| NruI | TCGCGA | 1 cut(s) | 1302 |
| NspI | RCATGY | 1 cut(s) | 14 |
| PasI | CCCWGGG | 1 cut(s) | 342 |
| PauI | GCGCGC | 2 cut(s) | 1508, 1534 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 957, 1150 |
| PctI | GAATGC | 2 cut(s) | 58, 640 |
| PdiI | GCCGGC | 1 cut(s) | 121 |
| PdmI | GAANNNNTTC | 3 cut(s) | 549, 978, 1518 |
| PfeI | GAWTC | 3 cut(s) | 251, 841, 1324 |
| PinAI | ACCGGT | 1 cut(s) | 193 |
| Ple19I | CGATCG | 2 cut(s) | 672, 1318 |
| PleI | GAGTC | 2 cut(s) | 1071, 1298 |
| PpsI | GAGTC | 2 cut(s) | 1071, 1298 |
| PpuMI | RGGWCCY | 3 cut(s) | 539, 1085, 1378 |
| Psp124BI | GAGCTC | 3 cut(s) | 103, 1123, 1194 |
| Psp5II | RGGWCCY | 3 cut(s) | 539, 1085, 1378 |
| Psp6I | CCWGG | 7 cut(s) | 166, 341, 502, 858, 1039, 1080, 1247 |
| PspFI | CCCAGC | 2 cut(s) | 476, 685 |
| PspGI | CCWGG | 7 cut(s) | 166, 341, 502, 858, 1039, 1080, 1247 |
| PspOMI | GGGCCC | 1 cut(s) | 760 |
| PspPI | GGNCC | 9 cut(s) | 539, 760, 761, 935, 1085, 1365, 1378, 1408, 1429 |
| PspPPI | RGGWCCY | 3 cut(s) | 539, 1085, 1378 |
| PstI | CTGCAG | 1 cut(s) | 1074 |
| PsuI | RGATCY | 2 cut(s) | 664, 1336 |
| PteI | GCGCGC | 2 cut(s) | 1508, 1534 |
| PvuI | CGATCG | 2 cut(s) | 672, 1318 |
| PvuII | CAGCTG | 3 cut(s) | 245, 494, 1112 |
| RruI | TCGCGA | 1 cut(s) | 1302 |
| RsaI | GTAC | 4 cut(s) | 228, 894, 1140, 1156 |
| RsaNI | GTAC | 4 cut(s) | 227, 893, 1139, 1155 |
| RseI | CAYNNNNRTG | 1 cut(s) | 15 |
| SacI | GAGCTC | 3 cut(s) | 103, 1123, 1194 |
| SacII | CCGCGG | 1 cut(s) | 1236 |
| SaqAI | TTAA | 1 cut(s) | 1469 |
| Sau3AI | GATC | 6 cut(s) | 337, 664, 669, 1215, 1315, 1336 |
| Sau96I | GGNCC | 9 cut(s) | 539, 760, 761, 935, 1085, 1365, 1378, 1408, 1429 |
| ScaI | AGTACT | 1 cut(s) | 228 |
| SchI | GAGTC | 2 cut(s) | 1071, 1298 |
| ScrFI | CCNGG | 8 cut(s) | 168, 343, 504, 860, 1041, 1082, 1104, 1249 |
| SduI | GDGCHC | 6 cut(s) | 103, 764, 822, 1123, 1194, 1572 |
| SfaNI | GCATC | 7 cut(s) | 76, 132, 172, 640, 784, 946, 1353 |
| SfcI | CTRYAG | 3 cut(s) | 240, 300, 1070 |
| SfiI | GGCCNNNNNGGCC | 1 cut(s) | 1244 |
| Sfr303I | CCGCGG | 1 cut(s) | 1236 |
| SgrBI | CCGCGG | 1 cut(s) | 1236 |
| SinI | GGWCC | 4 cut(s) | 539, 1085, 1365, 1378 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 15 |
| SmlI | CTYRAG | 5 cut(s) | 726, 927, 1122, 1468, 1503 |
| SmoI | CTYRAG | 5 cut(s) | 726, 927, 1122, 1468, 1503 |
| Sse9I | AATT | 5 cut(s) | 27, 129, 402, 1172, 1412 |
| SspMI | CTAG | 2 cut(s) | 1310, 1551 |
| SstI | GAGCTC | 3 cut(s) | 103, 1123, 1194 |
| StyD4I | CCNGG | 8 cut(s) | 166, 341, 502, 858, 1039, 1080, 1102, 1247 |
| StyI | CCWWGG | 1 cut(s) | 1404 |
| TaaI | ACNGT | 3 cut(s) | 185, 289, 1423 |
| TaiI | ACGT | 2 cut(s) | 783, 1156 |
| TaqI | TCGA | 5 cut(s) | 1026, 1318, 1398, 1522, 1597 |
| TaqII | GACCGA | 1 cut(s) | 384 |
| TasI | AATT | 5 cut(s) | 27, 129, 402, 1172, 1412 |
| TatI | WGTACW | 1 cut(s) | 226 |
| TauI | GCSGC | 9 cut(s) | 163, 174, 177, 800, 911, 1149, 1235, 1238, 1275 |
| TfiI | GAWTC | 3 cut(s) | 251, 841, 1324 |
| Tru1I | TTAA | 1 cut(s) | 1469 |
| Tru9I | TTAA | 1 cut(s) | 1469 |
| TscAI | CASTG | 3 cut(s) | 190, 574, 1168 |
| TseFI | GTSAC | 4 cut(s) | 696, 776, 1417, 1423 |
| TseI | GCWGC | 9 cut(s) | 296, 494, 941, 944, 1072, 1109, 1112, 1538, 1541 |
| Tsp45I | GTSAC | 4 cut(s) | 696, 776, 1417, 1423 |
| TspDTI | ATGAA | 6 cut(s) | 369, 636, 843, 1068, 1185, 1236 |
| TspGWI | ACGGA | 2 cut(s) | 641, 1228 |
| TspRI | CASTG | 3 cut(s) | 190, 574, 1168 |
| Vha464I | CTTAAG | 1 cut(s) | 1468 |
| VpaK11BI | GGWCC | 4 cut(s) | 539, 1085, 1365, 1378 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 147 |
| XapI | RAATTY | 1 cut(s) | 1172 |
| XceI | RCATGY | 1 cut(s) | 14 |
| XmnI | GAANNNNTTC | 3 cut(s) | 549, 978, 1518 |
| XspI | CTAG | 2 cut(s) | 1310, 1551 |
| ZraI | GACGTC | 1 cut(s) | 781 |
| ZrmI | AGTACT | 1 cut(s) | 228 |