Plant mobile domain
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 789 |
| Acc36I | ACCTGC | 1 cut(s) | 371 |
| AccB1I | GGYRCC | 2 cut(s) | 269, 758 |
| AccBSI | CCGCTC | 2 cut(s) | 435, 442 |
| AccI | GTMKAC | 1 cut(s) | 544 |
| AccII | CGCG | 3 cut(s) | 342, 423, 649 |
| AclWI | GGATC | 3 cut(s) | 366, 907, 920 |
| AcoI | YGGCCR | 3 cut(s) | 302, 793, 966 |
| AcuI | CTGAAG | 1 cut(s) | 475 |
| AfaI | GTAC | 4 cut(s) | 321, 822, 1010, 1049 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 66, 67, 203, 294, 361, 425 |
| AgsI | TTSAA | 2 cut(s) | 101, 707 |
| AhlI | ACTAGT | 1 cut(s) | 539 |
| AjnI | CCWGG | 3 cut(s) | 247, 332, 761 |
| AluBI | AGCT | 2 cut(s) | 639, 976 |
| AluI | AGCT | 2 cut(s) | 639, 976 |
| Alw26I | GTCTC | 3 cut(s) | 320, 338, 866 |
| AlwI | GGATC | 3 cut(s) | 366, 907, 920 |
| Ama87I | CYCGRG | 1 cut(s) | 354 |
| AoxI | GGCC | 9 cut(s) | 157, 205, 302, 351, 609, 780, 793, 886, 966 |
| ApaI | GGGCCC | 1 cut(s) | 161 |
| ApeKI | GCWGC | 3 cut(s) | 56, 377, 446 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 479, 511 |
| AspA2I | CCTAGG | 1 cut(s) | 979 |
| AspS9I | GGNCC | 9 cut(s) | 157, 158, 243, 352, 610, 620, 765, 781, 887 |
| AsuC2I | CCSGG | 5 cut(s) | 151, 182, 355, 356, 671 |
| AvaI | CYCGRG | 1 cut(s) | 354 |
| AvaII | GGWCC | 3 cut(s) | 243, 620, 765 |
| AvrII | CCTAGG | 1 cut(s) | 979 |
| BaeGI | GKGCMC | 3 cut(s) | 161, 274, 631 |
| BalI | TGGCCA | 1 cut(s) | 304 |
| BamHI | GGATCC | 1 cut(s) | 912 |
| BanI | GGYRCC | 2 cut(s) | 269, 758 |
| BanII | GRGCYC | 2 cut(s) | 161, 832 |
| BbsI | GAAGAC | 1 cut(s) | 89 |
| BbvI | GCAGC | 3 cut(s) | 43, 389, 433 |
| BccI | CCATC | 5 cut(s) | 150, 313, 542, 645, 981 |
| BceAI | ACGGC | 4 cut(s) | 220, 795, 808, 981 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 975, 1009 |
| BciT130I | CCWGG | 3 cut(s) | 249, 334, 763 |
| BcnI | CCSGG | 5 cut(s) | 151, 182, 355, 356, 671 |
| BcoDI | GTCTC | 3 cut(s) | 320, 338, 866 |
| BcuI | ACTAGT | 1 cut(s) | 539 |
| BfaI | CTAG | 3 cut(s) | 540, 824, 980 |
| BfuAI | ACCTGC | 1 cut(s) | 371 |
| BisI | GCNGC | 6 cut(s) | 57, 378, 440, 447, 796, 940 |
| BlnI | CCTAGG | 1 cut(s) | 979 |
| BlsI | GCNGC | 6 cut(s) | 58, 379, 441, 448, 797, 941 |
| BmcAI | AGTACT | 1 cut(s) | 1010 |
| Bme1390I | CCNGG | 8 cut(s) | 151, 182, 249, 334, 355, 356, 671, 763 |
| Bme18I | GGWCC | 3 cut(s) | 243, 620, 765 |
| BmeT110I | CYCGRG | 1 cut(s) | 354 |
| BmgT120I | GGNCC | 9 cut(s) | 157, 158, 243, 352, 610, 620, 765, 781, 887 |
| BmiI | GGNNCC | 8 cut(s) | 6, 159, 245, 271, 622, 760, 829, 914 |
| BmrFI | CCNGG | 8 cut(s) | 151, 182, 249, 334, 355, 356, 671, 763 |
| BmrI | ACTGGG | 1 cut(s) | 618 |
| BmsI | GCATC | 3 cut(s) | 849, 871, 1053 |
| BmuI | ACTGGG | 1 cut(s) | 618 |
| BpiI | GAAGAC | 1 cut(s) | 89 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 499, 531 |
| BpmI | CTGGAG | 1 cut(s) | 270 |
| BpuMI | CCSGG | 5 cut(s) | 151, 182, 355, 356, 671 |
| BsaI | GGTCTC | 2 cut(s) | 320, 866 |
| BsaJI | CCNNGG | 4 cut(s) | 247, 354, 606, 979 |
| BsaWI | WCCGGW | 1 cut(s) | 322 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 108, 138, 623, 653 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 66, 67, 203, 294, 361, 425 |
| Bse118I | RCCGGY | 2 cut(s) | 686, 964 |
| Bse1I | ACTGG | 4 cut(s) | 230, 624, 760, 1059 |
| Bse3DI | GCAATG | 1 cut(s) | 949 |
| BseBI | CCWGG | 3 cut(s) | 249, 334, 763 |
| BseDI | CCNNGG | 4 cut(s) | 247, 354, 606, 979 |
| BseGI | GGATG | 4 cut(s) | 305, 525, 862, 948 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 66, 67, 203, 294, 361, 425 |
| BseMI | GCAATG | 1 cut(s) | 949 |
| BseMII | CTCAG | 1 cut(s) | 1020 |
| BseNI | ACTGG | 4 cut(s) | 230, 624, 760, 1059 |
| BseSI | GKGCMC | 3 cut(s) | 161, 274, 631 |
| BseX3I | CGGCCG | 2 cut(s) | 793, 966 |
| BseXI | GCAGC | 3 cut(s) | 43, 389, 433 |
| BseYI | CCCAGC | 3 cut(s) | 154, 160, 612 |
| BsgI | GTGCAG | 1 cut(s) | 718 |
| Bsh1236I | CGCG | 3 cut(s) | 342, 423, 649 |
| Bsh1285I | CGRYCG | 3 cut(s) | 687, 796, 969 |
| BshFI | GGCC | 9 cut(s) | 159, 207, 304, 353, 611, 782, 795, 888, 968 |
| BshNI | GGYRCC | 2 cut(s) | 269, 758 |
| BsiEI | CGRYCG | 3 cut(s) | 687, 796, 969 |
| BsiHKCI | CYCGRG | 1 cut(s) | 354 |
| BsiSI | CCGG | 8 cut(s) | 150, 182, 323, 355, 670, 687, 885, 965 |
| BslFI | GGGAC | 2 cut(s) | 85, 606 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 66, 67, 203, 294, 361, 425 |
| BsmAI | GTCTC | 3 cut(s) | 320, 338, 866 |
| BsmBI | CGTCTC | 1 cut(s) | 338 |
| BsmFI | GGGAC | 2 cut(s) | 85, 606 |
| BsmI | GAATGC | 1 cut(s) | 90 |
| BsnI | GGCC | 9 cut(s) | 159, 207, 304, 353, 611, 782, 795, 888, 968 |
| Bso31I | GGTCTC | 2 cut(s) | 320, 866 |
| BsoBI | CYCGRG | 1 cut(s) | 354 |
| Bsp120I | GGGCCC | 1 cut(s) | 157 |
| Bsp1286I | GDGCHC | 4 cut(s) | 161, 274, 631, 832 |
| Bsp143I | GATC | 3 cut(s) | 358, 912, 970 |
| Bsp19I | CCATGG | 1 cut(s) | 606 |
| Bsp68I | TCGCGA | 1 cut(s) | 342 |
| BspANI | GGCC | 9 cut(s) | 159, 207, 304, 353, 611, 782, 795, 888, 968 |
| BspCNI | CTCAG | 1 cut(s) | 1021 |
| BspFNI | CGCG | 3 cut(s) | 342, 423, 649 |
| BspLI | GGNNCC | 8 cut(s) | 6, 159, 245, 271, 622, 760, 829, 914 |
| BspMI | ACCTGC | 1 cut(s) | 371 |
| BspPI | GGATC | 3 cut(s) | 366, 907, 920 |
| BspT107I | GGYRCC | 2 cut(s) | 269, 758 |
| BspTNI | GGTCTC | 2 cut(s) | 320, 866 |
| BsrBI | CCGCTC | 2 cut(s) | 435, 442 |
| BsrDI | GCAATG | 1 cut(s) | 949 |
| BsrFI | RCCGGY | 2 cut(s) | 686, 964 |
| BsrI | ACTGG | 4 cut(s) | 230, 624, 760, 1059 |
| BssAI | RCCGGY | 2 cut(s) | 686, 964 |
| BssECI | CCNNGG | 4 cut(s) | 247, 354, 606, 979 |
| BssMI | GATC | 3 cut(s) | 358, 912, 970 |
| BssT1I | CCWWGG | 2 cut(s) | 606, 979 |
| Bst2UI | CCWGG | 3 cut(s) | 249, 334, 763 |
| Bst4CI | ACNGT | 3 cut(s) | 620, 635, 820 |
| Bst6I | CTCTTC | 1 cut(s) | 33 |
| BstC8I | GCNNGC | 5 cut(s) | 351, 367, 437, 444, 842 |
| BstDEI | CTNAG | 2 cut(s) | 772, 1029 |
| BstDSI | CCRYGG | 1 cut(s) | 606 |
| BstEII | GGTNACC | 1 cut(s) | 428 |
| BstF5I | GGATG | 4 cut(s) | 305, 525, 862, 948 |
| BstFNI | CGCG | 3 cut(s) | 342, 423, 649 |
| BstKTI | GATC | 3 cut(s) | 361, 915, 973 |
| BstMAI | GTCTC | 3 cut(s) | 320, 338, 866 |
| BstMBI | GATC | 3 cut(s) | 358, 912, 970 |
| BstMCI | CGRYCG | 3 cut(s) | 687, 796, 969 |
| BstNI | CCWGG | 3 cut(s) | 249, 334, 763 |
| BstNSI | RCATGY | 1 cut(s) | 844 |
| BstPI | GGTNACC | 1 cut(s) | 428 |
| BstSCI | CCNGG | 8 cut(s) | 149, 180, 247, 332, 353, 354, 669, 761 |
| BstSLI | GKGCMC | 3 cut(s) | 161, 274, 631 |
| BstUI | CGCG | 3 cut(s) | 342, 423, 649 |
| BstV1I | GCAGC | 3 cut(s) | 43, 389, 433 |
| BstV2I | GAAGAC | 1 cut(s) | 89 |
| BstX2I | RGATCY | 2 cut(s) | 358, 912 |
| BstYI | RGATCY | 2 cut(s) | 358, 912 |
| BstZI | CGGCCG | 2 cut(s) | 793, 966 |
| BsuRI | GGCC | 9 cut(s) | 159, 207, 304, 353, 611, 782, 795, 888, 968 |
| BtgI | CCRYGG | 1 cut(s) | 606 |
| BtgZI | GCGATG | 1 cut(s) | 664 |
| BtsCI | GGATG | 4 cut(s) | 305, 525, 862, 948 |
| BtsI | GCAGTG | 1 cut(s) | 164 |
| BtsIMutI | CAGTG | 4 cut(s) | 164, 322, 631, 753 |
| BtuMI | TCGCGA | 1 cut(s) | 342 |
| BveI | ACCTGC | 1 cut(s) | 371 |
| Cac8I | GCNNGC | 5 cut(s) | 351, 367, 437, 444, 842 |
| Cfr10I | RCCGGY | 2 cut(s) | 686, 964 |
| Cfr13I | GGNCC | 9 cut(s) | 157, 158, 243, 352, 610, 620, 765, 781, 887 |
| Cfr9I | CCCGGG | 1 cut(s) | 354 |
| CseI | GACGC | 2 cut(s) | 197, 355 |
| Csp6I | GTAC | 4 cut(s) | 320, 821, 1009, 1048 |
| CviAII | CATG | 3 cut(s) | 572, 607, 841 |
| CviQI | GTAC | 4 cut(s) | 320, 821, 1009, 1048 |
| DdeI | CTNAG | 2 cut(s) | 772, 1029 |
| DpnI | GATC | 3 cut(s) | 360, 914, 972 |
| DpnII | GATC | 3 cut(s) | 358, 912, 970 |
| EaeI | YGGCCR | 3 cut(s) | 302, 793, 966 |
| EagI | CGGCCG | 2 cut(s) | 793, 966 |
| Eam1104I | CTCTTC | 1 cut(s) | 33 |
| EarI | CTCTTC | 1 cut(s) | 33 |
| EciI | GGCGGA | 2 cut(s) | 705, 926 |
| EclXI | CGGCCG | 2 cut(s) | 793, 966 |
| Eco130I | CCWWGG | 2 cut(s) | 606, 979 |
| Eco24I | GRGCYC | 2 cut(s) | 161, 832 |
| Eco31I | GGTCTC | 2 cut(s) | 320, 866 |
| Eco47I | GGWCC | 3 cut(s) | 243, 620, 765 |
| Eco52I | CGGCCG | 2 cut(s) | 793, 966 |
| Eco57I | CTGAAG | 1 cut(s) | 475 |
| Eco88I | CYCGRG | 1 cut(s) | 354 |
| Eco91I | GGTNACC | 1 cut(s) | 428 |
| EcoO109I | RGGNCCY | 1 cut(s) | 243 |
| EcoO65I | GGTNACC | 1 cut(s) | 428 |
| EcoRII | CCWGG | 3 cut(s) | 247, 332, 761 |
| EcoT14I | CCWWGG | 2 cut(s) | 606, 979 |
| EcoT22I | ATGCAT | 1 cut(s) | 864 |
| EcoT38I | GRGCYC | 2 cut(s) | 161, 832 |
| ErhI | CCWWGG | 2 cut(s) | 606, 979 |
| Esp3I | CGTCTC | 1 cut(s) | 338 |
| FaeI | CATG | 3 cut(s) | 575, 610, 844 |
| FaqI | GGGAC | 2 cut(s) | 85, 606 |
| FatI | CATG | 3 cut(s) | 571, 606, 840 |
| FauI | CCCGC | 2 cut(s) | 654, 960 |
| FblI | GTMKAC | 1 cut(s) | 544 |
| Fnu4HI | GCNGC | 6 cut(s) | 57, 378, 440, 447, 796, 940 |
| FokI | GGATG | 4 cut(s) | 292, 512, 849, 935 |
| FriOI | GRGCYC | 2 cut(s) | 161, 832 |
| Fsp4HI | GCNGC | 6 cut(s) | 57, 378, 440, 447, 796, 940 |
| FspBI | CTAG | 3 cut(s) | 540, 824, 980 |
| GluI | GCNGC | 6 cut(s) | 57, 378, 440, 447, 796, 940 |
| GsaI | CCCAGC | 3 cut(s) | 158, 164, 616 |
| GsuI | CTGGAG | 1 cut(s) | 270 |
| HaeIII | GGCC | 9 cut(s) | 159, 207, 304, 353, 611, 782, 795, 888, 968 |
| HapII | CCGG | 8 cut(s) | 150, 182, 323, 355, 670, 687, 885, 965 |
| HgaI | GACGC | 2 cut(s) | 197, 355 |
| Hin1II | CATG | 3 cut(s) | 575, 610, 844 |
| HincII | GTYRAC | 1 cut(s) | 592 |
| HindII | GTYRAC | 1 cut(s) | 592 |
| HinfI | GANTC | 1 cut(s) | 584 |
| HpaII | CCGG | 8 cut(s) | 150, 182, 323, 355, 670, 687, 885, 965 |
| Hpy166II | GTNNAC | 3 cut(s) | 320, 545, 592 |
| Hpy188I | TCNGA | 5 cut(s) | 139, 239, 494, 812, 1030 |
| Hpy188III | TCNNGA | 6 cut(s) | 341, 463, 704, 895, 910, 916 |
| Hpy8I | GTNNAC | 3 cut(s) | 320, 545, 592 |
| Hpy99I | CGWCG | 3 cut(s) | 191, 781, 859 |
| HpyAV | CCTTC | 5 cut(s) | 137, 218, 234, 460, 778 |
| HpyCH4III | ACNGT | 3 cut(s) | 620, 635, 820 |
| HpyCH4IV | ACGT | 1 cut(s) | 801 |
| HpyCH4V | TGCA | 4 cut(s) | 169, 571, 735, 862 |
| HpyF3I | CTNAG | 2 cut(s) | 772, 1029 |
| HpySE526I | ACGT | 1 cut(s) | 801 |
| Hsp92II | CATG | 3 cut(s) | 575, 610, 844 |
| Kzo9I | GATC | 3 cut(s) | 358, 912, 970 |
| LmnI | GCTCC | 4 cut(s) | 10, 644, 827, 981 |
| Lsp1109I | GCAGC | 3 cut(s) | 43, 389, 433 |
| LweI | GCATC | 3 cut(s) | 849, 871, 1053 |
| MaeI | CTAG | 3 cut(s) | 540, 824, 980 |
| MaeII | ACGT | 1 cut(s) | 801 |
| MaeIII | GTNAC | 1 cut(s) | 428 |
| MalI | GATC | 3 cut(s) | 360, 914, 972 |
| MbiI | CCGCTC | 2 cut(s) | 435, 442 |
| MboI | GATC | 3 cut(s) | 358, 912, 970 |
| MboII | GAAGA | 6 cut(s) | 47, 50, 89, 407, 732, 925 |
| MflI | RGATCY | 2 cut(s) | 358, 912 |
| MhlI | GDGCHC | 4 cut(s) | 161, 274, 631, 832 |
| MlsI | TGGCCA | 1 cut(s) | 304 |
| MluCI | AATT | 3 cut(s) | 298, 578, 693 |
| MluNI | TGGCCA | 1 cut(s) | 304 |
| MmeI | TCCRAC | 1 cut(s) | 162 |
| Mox20I | TGGCCA | 1 cut(s) | 304 |
| Mph1103I | ATGCAT | 1 cut(s) | 864 |
| MscI | TGGCCA | 1 cut(s) | 304 |
| MseI | TTAA | 1 cut(s) | 44 |
| Msp20I | TGGCCA | 1 cut(s) | 304 |
| MspI | CCGG | 8 cut(s) | 150, 182, 323, 355, 670, 687, 885, 965 |
| MspR9I | CCNGG | 8 cut(s) | 151, 182, 249, 334, 355, 356, 671, 763 |
| Mva1269I | GAATGC | 1 cut(s) | 90 |
| MvaI | CCWGG | 3 cut(s) | 249, 334, 763 |
| MvnI | CGCG | 3 cut(s) | 342, 423, 649 |
| NciI | CCSGG | 5 cut(s) | 151, 182, 355, 356, 671 |
| NcoI | CCATGG | 1 cut(s) | 606 |
| NdeII | GATC | 3 cut(s) | 358, 912, 970 |
| NlaIII | CATG | 3 cut(s) | 575, 610, 844 |
| NlaIV | GGNNCC | 8 cut(s) | 6, 159, 245, 271, 622, 760, 829, 914 |
| NruI | TCGCGA | 1 cut(s) | 342 |
| NsiI | ATGCAT | 1 cut(s) | 864 |
| NspI | RCATGY | 1 cut(s) | 844 |
| PaeI | GCATGC | 1 cut(s) | 844 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 798 |
| PctI | GAATGC | 1 cut(s) | 90 |
| PfeI | GAWTC | 1 cut(s) | 584 |
| PfoI | TCCNGGA | 1 cut(s) | 180 |
| PkrI | GCNGC | 6 cut(s) | 58, 379, 441, 448, 797, 941 |
| PpuMI | RGGWCCY | 1 cut(s) | 243 |
| PsiI | TTATAA | 1 cut(s) | 789 |
| Psp5II | RGGWCCY | 1 cut(s) | 243 |
| Psp6I | CCWGG | 3 cut(s) | 247, 332, 761 |
| PspEI | GGTNACC | 1 cut(s) | 428 |
| PspFI | CCCAGC | 3 cut(s) | 154, 160, 612 |
| PspGI | CCWGG | 3 cut(s) | 247, 332, 761 |
| PspN4I | GGNNCC | 8 cut(s) | 6, 159, 245, 271, 622, 760, 829, 914 |
| PspOMI | GGGCCC | 1 cut(s) | 157 |
| PspPI | GGNCC | 9 cut(s) | 157, 158, 243, 352, 610, 620, 765, 781, 887 |
| PspPPI | RGGWCCY | 1 cut(s) | 243 |
| PsuI | RGATCY | 2 cut(s) | 358, 912 |
| RruI | TCGCGA | 1 cut(s) | 342 |
| RsaI | GTAC | 4 cut(s) | 321, 822, 1010, 1049 |
| RsaNI | GTAC | 4 cut(s) | 320, 821, 1009, 1048 |
| SaqAI | TTAA | 1 cut(s) | 44 |
| SatI | GCNGC | 6 cut(s) | 57, 378, 440, 447, 796, 940 |
| Sau3AI | GATC | 3 cut(s) | 358, 912, 970 |
| Sau96I | GGNCC | 9 cut(s) | 157, 158, 243, 352, 610, 620, 765, 781, 887 |
| ScaI | AGTACT | 1 cut(s) | 1010 |
| ScrFI | CCNGG | 8 cut(s) | 151, 182, 249, 334, 355, 356, 671, 763 |
| SduI | GDGCHC | 4 cut(s) | 161, 274, 631, 832 |
| SfaNI | GCATC | 3 cut(s) | 849, 871, 1053 |
| SinI | GGWCC | 3 cut(s) | 243, 620, 765 |
| SmaI | CCCGGG | 1 cut(s) | 356 |
| SpeI | ACTAGT | 1 cut(s) | 539 |
| SphI | GCATGC | 1 cut(s) | 844 |
| Sse9I | AATT | 3 cut(s) | 298, 578, 693 |
| SspI | AATATT | 1 cut(s) | 710 |
| SspMI | CTAG | 3 cut(s) | 540, 824, 980 |
| StyD4I | CCNGG | 8 cut(s) | 149, 180, 247, 332, 353, 354, 669, 761 |
| StyI | CCWWGG | 2 cut(s) | 606, 979 |
| TaaI | ACNGT | 3 cut(s) | 620, 635, 820 |
| TaiI | ACGT | 1 cut(s) | 804 |
| TaqI | TCGA | 4 cut(s) | 27, 115, 602, 985 |
| TasI | AATT | 3 cut(s) | 298, 578, 693 |
| TatI | WGTACW | 2 cut(s) | 1008, 1047 |
| TauI | GCSGC | 3 cut(s) | 442, 798, 942 |
| TfiI | GAWTC | 1 cut(s) | 584 |
| Tru1I | TTAA | 1 cut(s) | 44 |
| Tru9I | TTAA | 1 cut(s) | 44 |
| TscAI | CASTG | 4 cut(s) | 171, 322, 631, 760 |
| TseI | GCWGC | 3 cut(s) | 56, 377, 446 |
| TspDTI | ATGAA | 3 cut(s) | 101, 401, 715 |
| TspMI | CCCGGG | 1 cut(s) | 354 |
| TspRI | CASTG | 4 cut(s) | 171, 322, 631, 760 |
| VpaK11BI | GGWCC | 3 cut(s) | 243, 620, 765 |
| XceI | RCATGY | 1 cut(s) | 844 |
| XmaI | CCCGGG | 1 cut(s) | 354 |
| XmaJI | CCTAGG | 1 cut(s) | 979 |
| XmiI | GTMKAC | 1 cut(s) | 544 |
| XspI | CTAG | 3 cut(s) | 540, 824, 980 |
| ZrmI | AGTACT | 1 cut(s) | 1010 |
| Zsp2I | ATGCAT | 1 cut(s) | 864 |