Plant mobile domain
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 376 |
| Acc16I | TGCGCA | 1 cut(s) | 1503 |
| AccB1I | GGYRCC | 1 cut(s) | 1694 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 475, 1202 |
| AccBSI | CCGCTC | 1 cut(s) | 1317 |
| AccII | CGCG | 9 cut(s) | 438, 495, 669, 671, 1179, 1235, 2019, 2105, 2172 |
| AcoI | YGGCCR | 3 cut(s) | 1204, 1413, 1638 |
| AcsI | RAATTY | 1 cut(s) | 218 |
| AcuI | CTGAAG | 4 cut(s) | 723, 1263, 1779, 2237 |
| AcyI | GRCGYC | 2 cut(s) | 900, 1695 |
| AfaI | GTAC | 5 cut(s) | 256, 506, 545, 785, 1689 |
| AfeI | AGCGCT | 1 cut(s) | 124 |
| AgeI | ACCGGT | 2 cut(s) | 313, 460 |
| AgsI | TTSAA | 5 cut(s) | 608, 1034, 1898, 2288, 2330 |
| AjnI | CCWGG | 3 cut(s) | 791, 1116, 2244 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 405, 437, 1230, 1262 |
| Alw21I | GWGCWC | 3 cut(s) | 174, 1105, 1993 |
| Alw26I | GTCTC | 6 cut(s) | 362, 952, 1245, 1384, 1961, 2343 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1202 |
| Ama87I | CYCGRG | 2 cut(s) | 305, 1387 |
| Aor51HI | AGCGCT | 1 cut(s) | 124 |
| ApaI | GGGCCC | 2 cut(s) | 828, 1805 |
| ApeKI | GCWGC | 9 cut(s) | 120, 698, 989, 1292, 1311, 1595, 1832, 2062, 2108 |
| ApoI | RAATTY | 1 cut(s) | 218 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 968, 1000, 1420, 1452 |
| AseI | ATTAAT | 2 cut(s) | 1355, 2088 |
| AsiGI | ACCGGT | 2 cut(s) | 313, 460 |
| AspLEI | GCGC | 9 cut(s) | 125, 654, 671, 1181, 1311, 1453, 1504, 1697, 1979 |
| AsuC2I | CCSGG | 7 cut(s) | 624, 835, 1793, 1845, 1911, 1974, 2281 |
| AsuHPI | GGTGA | 9 cut(s) | 25, 79, 85, 1108, 1155, 1240, 1730, 1741, 2038 |
| AvaI | CYCGRG | 2 cut(s) | 305, 1387 |
| AvaII | GGWCC | 3 cut(s) | 1321, 1847, 2235 |
| AxyI | CCTNAGG | 1 cut(s) | 1533 |
| BaeGI | GKGCMC | 2 cut(s) | 828, 1805 |
| BalI | TGGCCA | 1 cut(s) | 1206 |
| BamHI | GGATCC | 1 cut(s) | 408 |
| BanI | GGYRCC | 1 cut(s) | 1694 |
| BanII | GRGCYC | 9 cut(s) | 306, 328, 828, 1105, 1143, 1805, 1941, 1993, 2301 |
| BauI | CACGAG | 2 cut(s) | 1136, 1628 |
| BbsI | GAAGAC | 2 cut(s) | 1728, 1940 |
| Bbv12I | GWGCWC | 3 cut(s) | 174, 1105, 1993 |
| BbvCI | CCTCAGC | 1 cut(s) | 1680 |
| BbvI | GCAGC | 9 cut(s) | 132, 685, 1001, 1279, 1323, 1607, 1819, 2049, 2095 |
| BccI | CCATC | 7 cut(s) | 38, 53, 441, 1001, 1219, 1999, 2036 |
| BceAI | ACGGC | 4 cut(s) | 67, 291, 887, 2292 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 968, 1002 |
| BciT130I | CCWGG | 3 cut(s) | 793, 1118, 2246 |
| BciVI | GTATCC | 1 cut(s) | 917 |
| BcnI | CCSGG | 7 cut(s) | 624, 835, 1793, 1845, 1911, 1974, 2281 |
| BcoDI | GTCTC | 6 cut(s) | 362, 952, 1245, 1384, 1961, 2343 |
| BfmI | CTRYAG | 3 cut(s) | 637, 1277, 2066 |
| BfoI | RGCGCY | 3 cut(s) | 126, 1454, 1698 |
| BfuI | GTATCC | 1 cut(s) | 917 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 753 |
| Bme18I | GGWCC | 3 cut(s) | 1321, 1847, 2235 |
| BmeT110I | CYCGRG | 2 cut(s) | 305, 1387 |
| BmrI | ACTGGG | 1 cut(s) | 1706 |
| BmsI | GCATC | 5 cut(s) | 549, 778, 1048, 1489, 1988 |
| BmuI | ACTGGG | 1 cut(s) | 1706 |
| BoxI | GACNNNNGTC | 1 cut(s) | 1286 |
| BpiI | GAAGAC | 2 cut(s) | 1728, 1940 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1090, 1122 |
| BpmI | CTGGAG | 2 cut(s) | 1440, 1925 |
| Bpu10I | CCTNAGC | 3 cut(s) | 1680, 1992, 2127 |
| BpuEI | CTTGAG | 3 cut(s) | 1584, 1803, 2097 |
| BpuMI | CCSGG | 7 cut(s) | 624, 835, 1793, 1845, 1911, 1974, 2281 |
| Bsa29I | ATCGAT | 1 cut(s) | 1366 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1229 |
| BsaHI | GRCGYC | 2 cut(s) | 900, 1695 |
| BsaI | GGTCTC | 1 cut(s) | 952 |
| BsaJI | CCNNGG | 6 cut(s) | 102, 143, 903, 1116, 1455, 2103 |
| BsaWI | WCCGGW | 2 cut(s) | 313, 460 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1244, 1274 |
| Bse118I | RCCGGY | 6 cut(s) | 35, 182, 313, 460, 1121, 1706 |
| Bse1I | ACTGG | 6 cut(s) | 21, 256, 1098, 1207, 1207, 1712 |
| Bse21I | CCTNAGG | 1 cut(s) | 1533 |
| Bse3DI | GCAATG | 1 cut(s) | 301 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1229 |
| BseBI | CCWGG | 3 cut(s) | 793, 1118, 2246 |
| BseCI | ATCGAT | 1 cut(s) | 1366 |
| BseDI | CCNNGG | 6 cut(s) | 102, 143, 903, 1116, 1455, 2103 |
| BseJI | GATNNNNATC | 1 cut(s) | 1229 |
| BseMI | GCAATG | 1 cut(s) | 301 |
| BseMII | CTCAG | 8 cut(s) | 906, 1044, 1524, 1671, 2006, 2025, 2031, 2141 |
| BseNI | ACTGG | 6 cut(s) | 21, 256, 1098, 1207, 1207, 1712 |
| BseRI | GAGGAG | 6 cut(s) | 621, 1068, 1095, 1252, 1697, 2309 |
| BseSI | GKGCMC | 2 cut(s) | 828, 1805 |
| BseX3I | CGGCCG | 2 cut(s) | 1413, 1638 |
| BseXI | GCAGC | 9 cut(s) | 132, 685, 1001, 1279, 1323, 1607, 1819, 2049, 2095 |
| BseYI | CCCAGC | 2 cut(s) | 1195, 1397 |
| BsgI | GTGCAG | 2 cut(s) | 214, 1593 |
| Bsh1236I | CGCG | 9 cut(s) | 438, 495, 669, 671, 1179, 1235, 2019, 2105, 2172 |
| Bsh1285I | CGRYCG | 4 cut(s) | 183, 1416, 1545, 1641 |
| BshNI | GGYRCC | 1 cut(s) | 1694 |
| BshTI | ACCGGT | 2 cut(s) | 313, 460 |
| BshVI | ATCGAT | 1 cut(s) | 1366 |
| BsiEI | CGRYCG | 4 cut(s) | 183, 1416, 1545, 1641 |
| BsiHKAI | GWGCWC | 3 cut(s) | 174, 1105, 1993 |
| BsiHKCI | CYCGRG | 2 cut(s) | 305, 1387 |
| BslFI | GGGAC | 2 cut(s) | 925, 1441 |
| BsmAI | GTCTC | 6 cut(s) | 362, 952, 1245, 1384, 1961, 2343 |
| BsmFI | GGGAC | 2 cut(s) | 925, 1441 |
| Bso31I | GGTCTC | 1 cut(s) | 952 |
| BsoBI | CYCGRG | 2 cut(s) | 305, 1387 |
| Bsp120I | GGGCCC | 2 cut(s) | 824, 1801 |
| Bsp19I | CCATGG | 1 cut(s) | 102 |
| Bsp68I | TCGCGA | 2 cut(s) | 438, 2172 |
| BspCNI | CTCAG | 8 cut(s) | 907, 1045, 1525, 1672, 2005, 2026, 2032, 2140 |
| BspDI | ATCGAT | 1 cut(s) | 1366 |
| BspFNI | CGCG | 9 cut(s) | 438, 495, 669, 671, 1179, 1235, 2019, 2105, 2172 |
| BspMAI | CTGCAG | 1 cut(s) | 1281 |
| BspT107I | GGYRCC | 1 cut(s) | 1694 |
| BspTNI | GGTCTC | 1 cut(s) | 952 |
| BsrBI | CCGCTC | 1 cut(s) | 1317 |
| BsrDI | GCAATG | 1 cut(s) | 301 |
| BsrFI | RCCGGY | 6 cut(s) | 35, 182, 313, 460, 1121, 1706 |
| BsrI | ACTGG | 6 cut(s) | 21, 256, 1098, 1207, 1207, 1712 |
| BssAI | RCCGGY | 6 cut(s) | 35, 182, 313, 460, 1121, 1706 |
| BssECI | CCNNGG | 6 cut(s) | 102, 143, 903, 1116, 1455, 2103 |
| BssNI | GRCGYC | 2 cut(s) | 900, 1695 |
| BssSI | CACGAG | 2 cut(s) | 1136, 1628 |
| BssT1I | CCWWGG | 1 cut(s) | 102 |
| Bst2BI | CACGAG | 2 cut(s) | 1136, 1628 |
| Bst2UI | CCWGG | 3 cut(s) | 793, 1118, 2246 |
| Bst4CI | ACNGT | 7 cut(s) | 131, 147, 164, 641, 1285, 1492, 2272 |
| Bst6I | CTCTTC | 4 cut(s) | 270, 936, 1261, 1338 |
| BstACI | GRCGYC | 2 cut(s) | 900, 1695 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 316, 1187 |
| BstDSI | CCRYGG | 5 cut(s) | 102, 143, 903, 1455, 2103 |
| BstFNI | CGCG | 9 cut(s) | 438, 495, 669, 671, 1179, 1235, 2019, 2105, 2172 |
| BstH2I | RGCGCY | 3 cut(s) | 126, 1454, 1698 |
| BstHHI | GCGC | 9 cut(s) | 125, 654, 671, 1181, 1311, 1453, 1504, 1697, 1979 |
| BstMAI | GTCTC | 6 cut(s) | 362, 952, 1245, 1384, 1961, 2343 |
| BstMCI | CGRYCG | 4 cut(s) | 183, 1416, 1545, 1641 |
| BstNI | CCWGG | 3 cut(s) | 793, 1118, 2246 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 1286 |
| BstSFI | CTRYAG | 3 cut(s) | 637, 1277, 2066 |
| BstSLI | GKGCMC | 2 cut(s) | 828, 1805 |
| BstUI | CGCG | 9 cut(s) | 438, 495, 669, 671, 1179, 1235, 2019, 2105, 2172 |
| BstV1I | GCAGC | 9 cut(s) | 132, 685, 1001, 1279, 1323, 1607, 1819, 2049, 2095 |
| BstV2I | GAAGAC | 2 cut(s) | 1728, 1940 |
| BstX2I | RGATCY | 2 cut(s) | 393, 408 |
| BstYI | RGATCY | 2 cut(s) | 393, 408 |
| BstZI | CGGCCG | 2 cut(s) | 1413, 1638 |
| Bsu15I | ATCGAT | 1 cut(s) | 1366 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1533 |
| BsuI | GTATCC | 1 cut(s) | 917 |
| BsuTUI | ATCGAT | 1 cut(s) | 1366 |
| BtgI | CCRYGG | 5 cut(s) | 102, 143, 903, 1455, 2103 |
| BtgZI | GCGATG | 4 cut(s) | 419, 453, 1512, 2348 |
| BtsI | GCAGTG | 1 cut(s) | 1850 |
| BtsIMutI | CAGTG | 8 cut(s) | 249, 646, 1192, 1200, 1329, 1850, 2031, 2277 |
| BtuMI | TCGCGA | 2 cut(s) | 438, 2172 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1202 |
| CfoI | GCGC | 9 cut(s) | 125, 654, 671, 1181, 1311, 1453, 1504, 1697, 1979 |
| Cfr10I | RCCGGY | 6 cut(s) | 35, 182, 313, 460, 1121, 1706 |
| Cfr42I | CCGCGG | 1 cut(s) | 2106 |
| ClaI | ATCGAT | 1 cut(s) | 1366 |
| CseI | GACGC | 3 cut(s) | 908, 1532, 1934 |
| Csp6I | GTAC | 5 cut(s) | 255, 505, 544, 784, 1688 |
| CspAI | ACCGGT | 2 cut(s) | 313, 460 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 132, 167 |
| CviAII | CATG | 8 cut(s) | 68, 103, 113, 1338, 1726, 1751, 1829, 2291 |
| CviQI | GTAC | 5 cut(s) | 255, 505, 544, 784, 1688 |
| DinI | GGCGCC | 1 cut(s) | 1696 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 376 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 376 |
| EaeI | YGGCCR | 3 cut(s) | 1204, 1413, 1638 |
| EagI | CGGCCG | 2 cut(s) | 1413, 1638 |
| Eam1104I | CTCTTC | 4 cut(s) | 270, 936, 1261, 1338 |
| EarI | CTCTTC | 4 cut(s) | 270, 936, 1261, 1338 |
| EciI | GGCGGA | 2 cut(s) | 201, 2003 |
| Ecl136II | GAGCTC | 2 cut(s) | 1103, 1991 |
| EclXI | CGGCCG | 2 cut(s) | 1413, 1638 |
| Eco130I | CCWWGG | 1 cut(s) | 102 |
| Eco24I | GRGCYC | 9 cut(s) | 306, 328, 828, 1105, 1143, 1805, 1941, 1993, 2301 |
| Eco31I | GGTCTC | 1 cut(s) | 952 |
| Eco32I | GATATC | 1 cut(s) | 688 |
| Eco47I | GGWCC | 3 cut(s) | 1321, 1847, 2235 |
| Eco47III | AGCGCT | 1 cut(s) | 124 |
| Eco52I | CGGCCG | 2 cut(s) | 1413, 1638 |
| Eco53kI | GAGCTC | 2 cut(s) | 1103, 1991 |
| Eco57I | CTGAAG | 4 cut(s) | 723, 1263, 1779, 2237 |
| Eco81I | CCTNAGG | 1 cut(s) | 1533 |
| Eco88I | CYCGRG | 2 cut(s) | 305, 1387 |
| EcoICRI | GAGCTC | 2 cut(s) | 1103, 1991 |
| EcoO109I | RGGNCCY | 3 cut(s) | 825, 1802, 2143 |
| EcoRII | CCWGG | 3 cut(s) | 791, 1116, 2244 |
| EcoRV | GATATC | 1 cut(s) | 688 |
| EcoT14I | CCWWGG | 1 cut(s) | 102 |
| EcoT38I | GRGCYC | 9 cut(s) | 306, 328, 828, 1105, 1143, 1805, 1941, 1993, 2301 |
| EgeI | GGCGCC | 1 cut(s) | 1696 |
| EheI | GGCGCC | 1 cut(s) | 1696 |
| ErhI | CCWWGG | 1 cut(s) | 102 |
| FaeI | CATG | 8 cut(s) | 71, 106, 116, 1341, 1729, 1754, 1832, 2294 |
| FaqI | GGGAC | 2 cut(s) | 925, 1441 |
| FatI | CATG | 8 cut(s) | 67, 102, 112, 1337, 1725, 1750, 1828, 2290 |
| FauI | CCCGC | 4 cut(s) | 456, 963, 1756, 1792 |
| FriOI | GRGCYC | 9 cut(s) | 306, 328, 828, 1105, 1143, 1805, 1941, 1993, 2301 |
| FspI | TGCGCA | 1 cut(s) | 1503 |
| GlaI | GCGC | 9 cut(s) | 124, 653, 670, 1180, 1310, 1452, 1503, 1696, 1978 |
| GsaI | CCCAGC | 2 cut(s) | 1199, 1401 |
| GsuI | CTGGAG | 2 cut(s) | 1440, 1925 |
| HaeII | RGCGCY | 3 cut(s) | 126, 1454, 1698 |
| HgaI | GACGC | 3 cut(s) | 908, 1532, 1934 |
| HhaI | GCGC | 9 cut(s) | 125, 654, 671, 1181, 1311, 1453, 1504, 1697, 1979 |
| Hin1I | GRCGYC | 2 cut(s) | 900, 1695 |
| Hin1II | CATG | 8 cut(s) | 71, 106, 116, 1341, 1729, 1754, 1832, 2294 |
| Hin6I | GCGC | 9 cut(s) | 123, 652, 669, 1179, 1309, 1451, 1502, 1695, 1977 |
| HinP1I | GCGC | 9 cut(s) | 123, 652, 669, 1179, 1309, 1451, 1502, 1695, 1977 |
| HincII | GTYRAC | 1 cut(s) | 466 |
| HindII | GTYRAC | 1 cut(s) | 466 |
| HphI | GGTGA | 9 cut(s) | 25, 79, 85, 1108, 1155, 1240, 1730, 1741, 2038 |
| Hpy166II | GTNNAC | 4 cut(s) | 466, 907, 1850, 2046 |
| Hpy188I | TCNGA | 7 cut(s) | 526, 685, 1054, 1150, 1267, 1321, 2235 |
| Hpy8I | GTNNAC | 4 cut(s) | 466, 907, 1850, 2046 |
| Hpy99I | CGWCG | 6 cut(s) | 53, 277, 902, 1271, 1383, 1550 |
| HpyAV | CCTTC | 9 cut(s) | 100, 557, 629, 914, 1334, 1397, 1418, 1763, 1875 |
| HpyCH4III | ACNGT | 7 cut(s) | 131, 147, 164, 641, 1285, 1492, 2272 |
| HpyCH4V | TGCA | 7 cut(s) | 67, 231, 243, 358, 989, 1279, 1610 |
| Hsp92I | GRCGYC | 2 cut(s) | 900, 1695 |
| Hsp92II | CATG | 8 cut(s) | 71, 106, 116, 1341, 1729, 1754, 1832, 2294 |
| HspAI | GCGC | 9 cut(s) | 123, 652, 669, 1179, 1309, 1451, 1502, 1695, 1977 |
| KasI | GGCGCC | 1 cut(s) | 1694 |
| KroI | GCCGGC | 1 cut(s) | 1706 |
| KroNI | GCCGGC | 1 cut(s) | 1708 |
| KspI | CCGCGG | 1 cut(s) | 2106 |
| LmnI | GCTCC | 9 cut(s) | 169, 323, 733, 1108, 1759, 1813, 1846, 1944, 2296 |
| Lsp1109I | GCAGC | 9 cut(s) | 132, 685, 1001, 1279, 1323, 1607, 1819, 2049, 2095 |
| LweI | GCATC | 5 cut(s) | 549, 778, 1048, 1489, 1988 |
| MaeIII | GTNAC | 3 cut(s) | 85, 1161, 2272 |
| MbiI | CCGCTC | 1 cut(s) | 1317 |
| MfeI | CAATTG | 3 cut(s) | 955, 1505, 2261 |
| MflI | RGATCY | 2 cut(s) | 393, 408 |
| MlsI | TGGCCA | 1 cut(s) | 1206 |
| MluNI | TGGCCA | 1 cut(s) | 1206 |
| Mly113I | GGCGCC | 1 cut(s) | 1695 |
| MlyI | GAGTC | 3 cut(s) | 256, 1247, 1657 |
| MmeI | TCCRAC | 2 cut(s) | 1228, 1290 |
| Mox20I | TGGCCA | 1 cut(s) | 1206 |
| MroNI | GCCGGC | 1 cut(s) | 1706 |
| MscI | TGGCCA | 1 cut(s) | 1206 |
| MseI | TTAA | 3 cut(s) | 1355, 2088, 2353 |
| MslI | CAYNNNNRTG | 2 cut(s) | 438, 1034 |
| Msp20I | TGGCCA | 1 cut(s) | 1206 |
| MspA1I | CMGCKG | 3 cut(s) | 970, 1418, 2105 |
| MunI | CAATTG | 3 cut(s) | 955, 1505, 2261 |
| MvaI | CCWGG | 3 cut(s) | 793, 1118, 2246 |
| MvnI | CGCG | 9 cut(s) | 438, 495, 669, 671, 1179, 1235, 2019, 2105, 2172 |
| NaeI | GCCGGC | 1 cut(s) | 1708 |
| NarI | GGCGCC | 1 cut(s) | 1695 |
| NciI | CCSGG | 7 cut(s) | 624, 835, 1793, 1845, 1911, 1974, 2281 |
| NcoI | CCATGG | 1 cut(s) | 102 |
| NgoMIV | GCCGGC | 1 cut(s) | 1706 |
| NlaIII | CATG | 8 cut(s) | 71, 106, 116, 1341, 1729, 1754, 1832, 2294 |
| NmuCI | GTSAC | 3 cut(s) | 85, 1161, 2272 |
| NruI | TCGCGA | 2 cut(s) | 438, 2172 |
| NsbI | TGCGCA | 1 cut(s) | 1503 |
| PaeR7I | CTCGAG | 1 cut(s) | 1387 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1134 |
| PdiI | GCCGGC | 1 cut(s) | 1708 |
| PfeI | GAWTC | 7 cut(s) | 80, 189, 591, 819, 964, 1460, 2071 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 475, 1202 |
| PfoI | TCCNGGA | 3 cut(s) | 1791, 1909, 2244 |
| PinAI | ACCGGT | 2 cut(s) | 313, 460 |
| Ple19I | CGATCG | 1 cut(s) | 1545 |
| PleI | GAGTC | 3 cut(s) | 256, 1247, 1656 |
| PluTI | GGCGCC | 1 cut(s) | 1698 |
| PpsI | GAGTC | 3 cut(s) | 256, 1247, 1656 |
| PshAI | GACNNNNGTC | 1 cut(s) | 1286 |
| PshBI | ATTAAT | 2 cut(s) | 1355, 2088 |
| Psp124BI | GAGCTC | 2 cut(s) | 1105, 1993 |
| Psp6I | CCWGG | 3 cut(s) | 791, 1116, 2244 |
| PspFI | CCCAGC | 2 cut(s) | 1195, 1397 |
| PspGI | CCWGG | 3 cut(s) | 791, 1116, 2244 |
| PspOMI | GGGCCC | 2 cut(s) | 824, 1801 |
| PstI | CTGCAG | 1 cut(s) | 1281 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1202 |
| PsuI | RGATCY | 2 cut(s) | 393, 408 |
| PvuI | CGATCG | 1 cut(s) | 1545 |
| RruI | TCGCGA | 2 cut(s) | 438, 2172 |
| RsaI | GTAC | 5 cut(s) | 256, 506, 545, 785, 1689 |
| RsaNI | GTAC | 5 cut(s) | 255, 505, 544, 784, 1688 |
| RseI | CAYNNNNRTG | 2 cut(s) | 438, 1034 |
| SacI | GAGCTC | 2 cut(s) | 1105, 1993 |
| SacII | CCGCGG | 1 cut(s) | 2106 |
| SaqAI | TTAA | 3 cut(s) | 1355, 2088, 2353 |
| SchI | GAGTC | 3 cut(s) | 256, 1247, 1657 |
| SfaNI | GCATC | 5 cut(s) | 549, 778, 1048, 1489, 1988 |
| SfcI | CTRYAG | 3 cut(s) | 637, 1277, 2066 |
| SfoI | GGCGCC | 1 cut(s) | 1696 |
| Sfr274I | CTCGAG | 1 cut(s) | 1387 |
| Sfr303I | CCGCGG | 1 cut(s) | 2106 |
| SgrBI | CCGCGG | 1 cut(s) | 2106 |
| SinI | GGWCC | 3 cut(s) | 1321, 1847, 2235 |
| SlaI | CTCGAG | 1 cut(s) | 1387 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 438, 1034 |
| SmlI | CTYRAG | 4 cut(s) | 1387, 1599, 1818, 2112 |
| SmoI | CTYRAG | 4 cut(s) | 1387, 1599, 1818, 2112 |
| SspDI | GGCGCC | 1 cut(s) | 1694 |
| SspI | AATATT | 1 cut(s) | 579 |
| SstI | GAGCTC | 2 cut(s) | 1105, 1993 |
| StyI | CCWWGG | 1 cut(s) | 102 |
| TaaI | ACNGT | 7 cut(s) | 131, 147, 164, 641, 1285, 1492, 2272 |
| TaqI | TCGA | 8 cut(s) | 48, 78, 98, 897, 1366, 1381, 1388, 1959 |
| TauI | GCSGC | 8 cut(s) | 294, 495, 669, 1317, 1418, 1643, 2019, 2108 |
| TfiI | GAWTC | 7 cut(s) | 80, 189, 591, 819, 964, 1460, 2071 |
| Tru1I | TTAA | 3 cut(s) | 1355, 2088, 2353 |
| Tru9I | TTAA | 3 cut(s) | 1355, 2088, 2353 |
| TscAI | CASTG | 8 cut(s) | 256, 646, 1192, 1207, 1336, 1857, 2038, 2277 |
| TseFI | GTSAC | 3 cut(s) | 85, 1161, 2272 |
| TseI | GCWGC | 9 cut(s) | 120, 698, 989, 1292, 1311, 1595, 1832, 2062, 2108 |
| Tsp45I | GTSAC | 3 cut(s) | 85, 1161, 2272 |
| TspDTI | ATGAA | 3 cut(s) | 1365, 1605, 2106 |
| TspGWI | ACGGA | 3 cut(s) | 940, 1472, 2098 |
| TspRI | CASTG | 8 cut(s) | 256, 646, 1192, 1207, 1336, 1857, 2038, 2277 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 475, 1202 |
| VpaK11BI | GGWCC | 3 cut(s) | 1321, 1847, 2235 |
| VspI | ATTAAT | 2 cut(s) | 1355, 2088 |
| XapI | RAATTY | 1 cut(s) | 218 |
| XhoI | CTCGAG | 1 cut(s) | 1387 |