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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 1287 |
| Acc36I | ACCTGC | 1 cut(s) | 496 |
| AccB7I | CCANNNNNTGG | 3 cut(s) | 314, 347, 1354 |
| AccI | GTMKAC | 3 cut(s) | 51, 69, 171 |
| AccII | CGCG | 8 cut(s) | 8, 282, 324, 380, 629, 833, 1194, 1536 |
| AclWI | GGATC | 5 cut(s) | 898, 1016, 1397, 1547, 1560 |
| AcoI | YGGCCR | 4 cut(s) | 135, 349, 828, 843 |
| AcuI | CTGAAG | 4 cut(s) | 219, 408, 531, 951 |
| AcvI | CACGTG | 1 cut(s) | 1576 |
| AcyI | GRCGYC | 1 cut(s) | 45 |
| AfaI | GTAC | 5 cut(s) | 660, 801, 1068, 1175, 1787 |
| AgeI | ACCGGT | 1 cut(s) | 238 |
| AgsI | TTSAA | 4 cut(s) | 154, 395, 1430, 1505 |
| AjiI | CACGTC | 2 cut(s) | 254, 637 |
| AjnI | CCWGG | 9 cut(s) | 261, 1103, 1147, 1292, 1419, 1643, 1675, 1727, 1742 |
| AluBI | AGCT | 7 cut(s) | 551, 678, 796, 998, 1166, 1301, 1532 |
| AluI | AGCT | 7 cut(s) | 551, 678, 796, 998, 1166, 1301, 1532 |
| Alw21I | GWGCWC | 1 cut(s) | 1168 |
| Alw26I | GTCTC | 6 cut(s) | 652, 1205, 1374, 1518, 1563, 1653 |
| AlwI | GGATC | 5 cut(s) | 898, 1016, 1397, 1547, 1560 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 347, 554 |
| ApeKI | GCWGC | 6 cut(s) | 206, 437, 551, 851, 1007, 1010 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 113, 145, 492, 524 |
| AseI | ATTAAT | 1 cut(s) | 1263 |
| AsiGI | ACCGGT | 1 cut(s) | 238 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1542 |
| AspLEI | GCGC | 6 cut(s) | 10, 326, 589, 763, 1154, 1288 |
| AsuC2I | CCSGG | 3 cut(s) | 777, 1086, 1456 |
| AsuHPI | GGTGA | 9 cut(s) | 253, 385, 569, 791, 902, 958, 1213, 1459, 1732 |
| AvaII | GGWCC | 3 cut(s) | 519, 1410, 1648 |
| BaeGI | GKGCMC | 1 cut(s) | 458 |
| BalI | TGGCCA | 1 cut(s) | 351 |
| BamHI | GGATCC | 1 cut(s) | 1552 |
| BanII | GRGCYC | 5 cut(s) | 250, 288, 1116, 1133, 1168 |
| BauI | CACGAG | 1 cut(s) | 818 |
| BbrPI | CACGTG | 1 cut(s) | 1576 |
| BbsI | GAAGAC | 1 cut(s) | 900 |
| Bbv12I | GWGCWC | 1 cut(s) | 1168 |
| BbvI | GCAGC | 6 cut(s) | 193, 424, 538, 838, 994, 997 |
| BccI | CCATC | 5 cut(s) | 146, 1103, 1726, 1732, 1751 |
| BceAI | ACGGC | 3 cut(s) | 32, 830, 858 |
| BcgI | CGANNNNNNTGC | 6 cut(s) | 113, 147, 494, 528, 619, 653 |
| BciT130I | CCWGG | 9 cut(s) | 263, 1105, 1149, 1294, 1421, 1645, 1677, 1729, 1744 |
| BciVI | GTATCC | 1 cut(s) | 1707 |
| BcnI | CCSGG | 3 cut(s) | 777, 1086, 1456 |
| BcoDI | GTCTC | 6 cut(s) | 652, 1205, 1374, 1518, 1563, 1653 |
| BfaI | CTAG | 8 cut(s) | 749, 765, 884, 1049, 1058, 1169, 1481, 1493 |
| BfmI | CTRYAG | 1 cut(s) | 503 |
| BfoI | RGCGCY | 2 cut(s) | 590, 764 |
| BfuAI | ACCTGC | 1 cut(s) | 496 |
| BfuI | GTATCC | 1 cut(s) | 1707 |
| BmcAI | AGTACT | 2 cut(s) | 1068, 1175 |
| Bme18I | GGWCC | 3 cut(s) | 519, 1410, 1648 |
| BmgBI | CACGTC | 2 cut(s) | 254, 637 |
| BmrI | ACTGGG | 1 cut(s) | 37 |
| BmsI | GCATC | 3 cut(s) | 193, 633, 1163 |
| BmuI | ACTGGG | 1 cut(s) | 37 |
| BpiI | GAAGAC | 1 cut(s) | 900 |
| BpmI | CTGGAG | 6 cut(s) | 324, 508, 1002, 1698, 1750, 1766 |
| Bpu10I | CCTNAGC | 3 cut(s) | 33, 1032, 1302 |
| BpuEI | CTTGAG | 5 cut(s) | 743, 774, 1198, 1481, 1512 |
| BpuMI | CCSGG | 3 cut(s) | 777, 1086, 1456 |
| BsaAI | YACGTR | 1 cut(s) | 1576 |
| BsaBI | GATNNNNATC | 2 cut(s) | 417, 809 |
| BsaHI | GRCGYC | 1 cut(s) | 45 |
| BsaI | GGTCTC | 1 cut(s) | 652 |
| BsaJI | CCNNGG | 9 cut(s) | 261, 294, 441, 470, 591, 831, 1104, 1644, 1675 |
| BsaWI | WCCGGW | 2 cut(s) | 238, 958 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 930, 960 |
| Bse118I | RCCGGY | 2 cut(s) | 238, 516 |
| Bse1I | ACTGG | 5 cut(s) | 32, 352, 352, 656, 1783 |
| Bse8I | GATNNNNATC | 2 cut(s) | 417, 809 |
| BseBI | CCWGG | 9 cut(s) | 263, 1105, 1149, 1294, 1421, 1645, 1677, 1729, 1744 |
| BseDI | CCNNGG | 9 cut(s) | 261, 294, 441, 470, 591, 831, 1104, 1644, 1675 |
| BseGI | GGATG | 7 cut(s) | 124, 487, 742, 1114, 1137, 1154, 1724 |
| BseJI | GATNNNNATC | 2 cut(s) | 417, 809 |
| BseMII | CTCAG | 6 cut(s) | 51, 1023, 1118, 1200, 1206, 1316 |
| BseNI | ACTGG | 5 cut(s) | 32, 352, 352, 656, 1783 |
| BseRI | GAGGAG | 2 cut(s) | 213, 1551 |
| BseSI | GKGCMC | 1 cut(s) | 458 |
| BseX3I | CGGCCG | 2 cut(s) | 828, 843 |
| BseXI | GCAGC | 6 cut(s) | 193, 424, 538, 838, 994, 997 |
| BsgI | GTGCAG | 1 cut(s) | 192 |
| Bsh1236I | CGCG | 8 cut(s) | 8, 282, 324, 380, 629, 833, 1194, 1536 |
| Bsh1285I | CGRYCG | 5 cut(s) | 735, 831, 846, 1278, 1620 |
| BshTI | ACCGGT | 1 cut(s) | 238 |
| BsiEI | CGRYCG | 5 cut(s) | 735, 831, 846, 1278, 1620 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1168 |
| BsiSI | CCGG | 8 cut(s) | 227, 239, 517, 777, 827, 959, 1086, 1456 |
| BslFI | GGGAC | 3 cut(s) | 70, 577, 647 |
| BsmAI | GTCTC | 6 cut(s) | 652, 1205, 1374, 1518, 1563, 1653 |
| BsmBI | CGTCTC | 1 cut(s) | 1563 |
| BsmFI | GGGAC | 3 cut(s) | 70, 577, 647 |
| BsmI | GAATGC | 1 cut(s) | 955 |
| Bso31I | GGTCTC | 1 cut(s) | 652 |
| Bsp1286I | GDGCHC | 6 cut(s) | 250, 288, 458, 1116, 1133, 1168 |
| Bsp143I | GATC | 9 cut(s) | 16, 212, 375, 496, 732, 903, 1021, 1389, 1552 |
| Bsp19I | CCATGG | 1 cut(s) | 470 |
| Bsp68I | TCGCGA | 4 cut(s) | 282, 629, 1194, 1536 |
| BspCNI | CTCAG | 6 cut(s) | 52, 1024, 1119, 1201, 1207, 1315 |
| BspFNI | CGCG | 8 cut(s) | 8, 282, 324, 380, 629, 833, 1194, 1536 |
| BspHI | TCATGA | 1 cut(s) | 991 |
| BspMAI | CTGCAG | 1 cut(s) | 507 |
| BspMI | ACCTGC | 1 cut(s) | 496 |
| BspPI | GGATC | 5 cut(s) | 898, 1016, 1397, 1547, 1560 |
| BspQI | GCTCTTC | 1 cut(s) | 550 |
| BspTNI | GGTCTC | 1 cut(s) | 652 |
| BsrFI | RCCGGY | 2 cut(s) | 238, 516 |
| BsrI | ACTGG | 5 cut(s) | 32, 352, 352, 656, 1783 |
| BssAI | RCCGGY | 2 cut(s) | 238, 516 |
| BssECI | CCNNGG | 9 cut(s) | 261, 294, 441, 470, 591, 831, 1104, 1644, 1675 |
| BssMI | GATC | 9 cut(s) | 16, 212, 375, 496, 732, 903, 1021, 1389, 1552 |
| BssNAI | GTATAC | 1 cut(s) | 70 |
| BssNI | GRCGYC | 1 cut(s) | 45 |
| BssSI | CACGAG | 1 cut(s) | 818 |
| BssT1I | CCWWGG | 2 cut(s) | 441, 470 |
| Bst1107I | GTATAC | 1 cut(s) | 70 |
| Bst2BI | CACGAG | 1 cut(s) | 818 |
| Bst2UI | CCWGG | 9 cut(s) | 263, 1105, 1149, 1294, 1421, 1645, 1677, 1729, 1744 |
| Bst4CI | ACNGT | 3 cut(s) | 373, 430, 1621 |
| Bst6I | CTCTTC | 2 cut(s) | 471, 550 |
| BstACI | GRCGYC | 1 cut(s) | 45 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 332 |
| BstBAI | YACGTR | 1 cut(s) | 1576 |
| BstDEI | CTNAG | 8 cut(s) | 33, 60, 1032, 1127, 1209, 1215, 1302, 1547 |
| BstDSI | CCRYGG | 3 cut(s) | 470, 591, 831 |
| BstF5I | GGATG | 7 cut(s) | 124, 487, 742, 1114, 1137, 1154, 1724 |
| BstFNI | CGCG | 8 cut(s) | 8, 282, 324, 380, 629, 833, 1194, 1536 |
| BstH2I | RGCGCY | 2 cut(s) | 590, 764 |
| BstHHI | GCGC | 6 cut(s) | 10, 326, 589, 763, 1154, 1288 |
| BstKTI | GATC | 9 cut(s) | 19, 215, 378, 499, 735, 906, 1024, 1392, 1555 |
| BstMAI | GTCTC | 6 cut(s) | 652, 1205, 1374, 1518, 1563, 1653 |
| BstMBI | GATC | 9 cut(s) | 16, 212, 375, 496, 732, 903, 1021, 1389, 1552 |
| BstMCI | CGRYCG | 5 cut(s) | 735, 831, 846, 1278, 1620 |
| BstNI | CCWGG | 9 cut(s) | 263, 1105, 1149, 1294, 1421, 1645, 1677, 1729, 1744 |
| BstSFI | CTRYAG | 1 cut(s) | 503 |
| BstSLI | GKGCMC | 1 cut(s) | 458 |
| BstUI | CGCG | 8 cut(s) | 8, 282, 324, 380, 629, 833, 1194, 1536 |
| BstV1I | GCAGC | 6 cut(s) | 193, 424, 538, 838, 994, 997 |
| BstV2I | GAAGAC | 1 cut(s) | 900 |
| BstX2I | RGATCY | 2 cut(s) | 1021, 1552 |
| BstYI | RGATCY | 2 cut(s) | 1021, 1552 |
| BstZ17I | GTATAC | 1 cut(s) | 70 |
| BstZI | CGGCCG | 2 cut(s) | 828, 843 |
| BsuI | GTATCC | 1 cut(s) | 1707 |
| BtgI | CCRYGG | 3 cut(s) | 470, 591, 831 |
| BtgZI | GCGATG | 1 cut(s) | 610 |
| BtrI | CACGTC | 2 cut(s) | 254, 637 |
| BtsCI | GGATG | 7 cut(s) | 124, 487, 742, 1114, 1137, 1154, 1724 |
| BtsI | GCAGTG | 1 cut(s) | 1025 |
| BtsIMutI | CAGTG | 4 cut(s) | 345, 462, 1025, 1206 |
| BtuMI | TCGCGA | 4 cut(s) | 282, 629, 1194, 1536 |
| BveI | ACCTGC | 1 cut(s) | 496 |
| CaiI | CAGNNNCTG | 2 cut(s) | 347, 554 |
| CciI | TCATGA | 1 cut(s) | 991 |
| CfoI | GCGC | 6 cut(s) | 10, 326, 589, 763, 1154, 1288 |
| Cfr10I | RCCGGY | 2 cut(s) | 238, 516 |
| Cfr42I | CCGCGG | 1 cut(s) | 834 |
| CseI | GACGC | 2 cut(s) | 53, 722 |
| Csp6I | GTAC | 5 cut(s) | 659, 800, 1067, 1174, 1786 |
| CspAI | ACCGGT | 1 cut(s) | 238 |
| CviAII | CATG | 6 cut(s) | 471, 898, 923, 992, 1001, 1466 |
| CviQI | GTAC | 5 cut(s) | 659, 800, 1067, 1174, 1786 |
| DdeI | CTNAG | 8 cut(s) | 33, 60, 1032, 1127, 1209, 1215, 1302, 1547 |
| DpnI | GATC | 9 cut(s) | 18, 214, 377, 498, 734, 905, 1023, 1391, 1554 |
| DpnII | GATC | 9 cut(s) | 16, 212, 375, 496, 732, 903, 1021, 1389, 1552 |
| EaeI | YGGCCR | 4 cut(s) | 135, 349, 828, 843 |
| EagI | CGGCCG | 2 cut(s) | 828, 843 |
| Eam1104I | CTCTTC | 2 cut(s) | 471, 550 |
| EarI | CTCTTC | 2 cut(s) | 471, 550 |
| EciI | GGCGGA | 2 cut(s) | 1147, 1620 |
| Ecl136II | GAGCTC | 1 cut(s) | 1166 |
| EclXI | CGGCCG | 2 cut(s) | 828, 843 |
| Eco130I | CCWWGG | 2 cut(s) | 441, 470 |
| Eco24I | GRGCYC | 5 cut(s) | 250, 288, 1116, 1133, 1168 |
| Eco31I | GGTCTC | 1 cut(s) | 652 |
| Eco47I | GGWCC | 3 cut(s) | 519, 1410, 1648 |
| Eco52I | CGGCCG | 2 cut(s) | 828, 843 |
| Eco53kI | GAGCTC | 1 cut(s) | 1166 |
| Eco57I | CTGAAG | 4 cut(s) | 219, 408, 531, 951 |
| Eco72I | CACGTG | 1 cut(s) | 1576 |
| EcoICRI | GAGCTC | 1 cut(s) | 1166 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1318 |
| EcoRII | CCWGG | 9 cut(s) | 261, 1103, 1147, 1292, 1419, 1643, 1675, 1727, 1742 |
| EcoT14I | CCWWGG | 2 cut(s) | 441, 470 |
| EcoT38I | GRGCYC | 5 cut(s) | 250, 288, 1116, 1133, 1168 |
| ErhI | CCWWGG | 2 cut(s) | 441, 470 |
| Esp3I | CGTCTC | 1 cut(s) | 1563 |
| FaeI | CATG | 6 cut(s) | 474, 901, 926, 995, 1004, 1469 |
| FaqI | GGGAC | 3 cut(s) | 70, 577, 647 |
| FatI | CATG | 6 cut(s) | 470, 897, 922, 991, 1000, 1465 |
| FauI | CCCGC | 2 cut(s) | 108, 928 |
| FauNDI | CATATG | 1 cut(s) | 163 |
| FblI | GTMKAC | 3 cut(s) | 51, 69, 171 |
| FokI | GGATG | 7 cut(s) | 131, 494, 729, 1121, 1124, 1141, 1711 |
| FriOI | GRGCYC | 5 cut(s) | 250, 288, 1116, 1133, 1168 |
| FspBI | CTAG | 8 cut(s) | 749, 765, 884, 1049, 1058, 1169, 1481, 1493 |
| FspI | TGCGCA | 1 cut(s) | 1287 |
| GlaI | GCGC | 6 cut(s) | 9, 325, 588, 762, 1153, 1287 |
| GsuI | CTGGAG | 6 cut(s) | 324, 508, 1002, 1698, 1750, 1766 |
| HaeII | RGCGCY | 2 cut(s) | 590, 764 |
| HapII | CCGG | 8 cut(s) | 227, 239, 517, 777, 827, 959, 1086, 1456 |
| HgaI | GACGC | 2 cut(s) | 53, 722 |
| HhaI | GCGC | 6 cut(s) | 10, 326, 589, 763, 1154, 1288 |
| Hin1I | GRCGYC | 1 cut(s) | 45 |
| Hin1II | CATG | 6 cut(s) | 474, 901, 926, 995, 1004, 1469 |
| Hin6I | GCGC | 6 cut(s) | 8, 324, 587, 761, 1152, 1286 |
| HinP1I | GCGC | 6 cut(s) | 8, 324, 587, 761, 1152, 1286 |
| HincII | GTYRAC | 1 cut(s) | 172 |
| HindII | GTYRAC | 1 cut(s) | 172 |
| HinfI | GANTC | 4 cut(s) | 109, 398, 596, 1543 |
| HpaII | CCGG | 8 cut(s) | 227, 239, 517, 777, 827, 959, 1086, 1456 |
| HphI | GGTGA | 9 cut(s) | 253, 385, 569, 791, 902, 958, 1213, 1459, 1732 |
| Hpy166II | GTNNAC | 5 cut(s) | 52, 70, 172, 1221, 1573 |
| Hpy188I | TCNGA | 9 cut(s) | 146, 199, 295, 409, 712, 1128, 1410, 1566, 1652 |
| Hpy8I | GTNNAC | 5 cut(s) | 52, 70, 172, 1221, 1573 |
| Hpy99I | CGWCG | 3 cut(s) | 47, 516, 851 |
| HpyCH4III | ACNGT | 3 cut(s) | 373, 430, 1621 |
| HpyCH4IV | ACGT | 3 cut(s) | 253, 636, 1575 |
| HpyCH4V | TGCA | 3 cut(s) | 209, 505, 640 |
| HpyF3I | CTNAG | 8 cut(s) | 33, 60, 1032, 1127, 1209, 1215, 1302, 1547 |
| HpySE526I | ACGT | 3 cut(s) | 253, 636, 1575 |
| Hsp92I | GRCGYC | 1 cut(s) | 45 |
| Hsp92II | CATG | 6 cut(s) | 474, 901, 926, 995, 1004, 1469 |
| HspAI | GCGC | 6 cut(s) | 8, 324, 587, 761, 1152, 1286 |
| KspI | CCGCGG | 1 cut(s) | 834 |
| Kzo9I | GATC | 9 cut(s) | 16, 212, 375, 496, 732, 903, 1021, 1389, 1552 |
| LguI | GCTCTTC | 1 cut(s) | 550 |
| LmnI | GCTCC | 9 cut(s) | 382, 451, 872, 931, 961, 985, 1119, 1579, 1785 |
| Lsp1109I | GCAGC | 6 cut(s) | 193, 424, 538, 838, 994, 997 |
| LweI | GCATC | 3 cut(s) | 193, 633, 1163 |
| MaeI | CTAG | 8 cut(s) | 749, 765, 884, 1049, 1058, 1169, 1481, 1493 |
| MaeII | ACGT | 3 cut(s) | 253, 636, 1575 |
| MaeIII | GTNAC | 1 cut(s) | 1738 |
| MalI | GATC | 9 cut(s) | 18, 214, 377, 498, 734, 905, 1023, 1391, 1554 |
| MboI | GATC | 9 cut(s) | 16, 212, 375, 496, 732, 903, 1021, 1389, 1552 |
| MfeI | CAATTG | 3 cut(s) | 100, 641, 1436 |
| MflI | RGATCY | 2 cut(s) | 1021, 1552 |
| MhlI | GDGCHC | 6 cut(s) | 250, 288, 458, 1116, 1133, 1168 |
| MlsI | TGGCCA | 1 cut(s) | 351 |
| MluCI | AATT | 9 cut(s) | 100, 149, 276, 641, 651, 686, 771, 861, 1436 |
| MluNI | TGGCCA | 1 cut(s) | 351 |
| MmeI | TCCRAC | 2 cut(s) | 1141, 1675 |
| Mox20I | TGGCCA | 1 cut(s) | 351 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1542 |
| MscI | TGGCCA | 1 cut(s) | 351 |
| MseI | TTAA | 1 cut(s) | 1263 |
| MslI | CAYNNNNRTG | 1 cut(s) | 179 |
| Msp20I | TGGCCA | 1 cut(s) | 351 |
| MspA1I | CMGCKG | 5 cut(s) | 115, 437, 551, 833, 1007 |
| MspI | CCGG | 8 cut(s) | 227, 239, 517, 777, 827, 959, 1086, 1456 |
| MunI | CAATTG | 3 cut(s) | 100, 641, 1436 |
| Mva1269I | GAATGC | 1 cut(s) | 955 |
| MvaI | CCWGG | 9 cut(s) | 263, 1105, 1149, 1294, 1421, 1645, 1677, 1729, 1744 |
| MvnI | CGCG | 8 cut(s) | 8, 282, 324, 380, 629, 833, 1194, 1536 |
| NciI | CCSGG | 3 cut(s) | 777, 1086, 1456 |
| NcoI | CCATGG | 1 cut(s) | 470 |
| NdeI | CATATG | 1 cut(s) | 163 |
| NdeII | GATC | 9 cut(s) | 16, 212, 375, 496, 732, 903, 1021, 1389, 1552 |
| NlaIII | CATG | 6 cut(s) | 474, 901, 926, 995, 1004, 1469 |
| NmuCI | GTSAC | 1 cut(s) | 1738 |
| NruI | TCGCGA | 4 cut(s) | 282, 629, 1194, 1536 |
| NsbI | TGCGCA | 1 cut(s) | 1287 |
| PagI | TCATGA | 1 cut(s) | 991 |
| PciSI | GCTCTTC | 1 cut(s) | 550 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 279, 633 |
| PctI | GAATGC | 1 cut(s) | 955 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1542 |
| PfeI | GAWTC | 4 cut(s) | 109, 398, 596, 1543 |
| PflFI | GACNNNGTC | 1 cut(s) | 884 |
| PflMI | CCANNNNNTGG | 3 cut(s) | 314, 347, 1354 |
| PfoI | TCCNGGA | 3 cut(s) | 1084, 1419, 1727 |
| PinAI | ACCGGT | 1 cut(s) | 238 |
| Ple19I | CGATCG | 1 cut(s) | 735 |
| PmaCI | CACGTG | 1 cut(s) | 1576 |
| PmlI | CACGTG | 1 cut(s) | 1576 |
| Ppu21I | YACGTR | 1 cut(s) | 1576 |
| PshBI | ATTAAT | 1 cut(s) | 1263 |
| Psp124BI | GAGCTC | 1 cut(s) | 1168 |
| Psp6I | CCWGG | 9 cut(s) | 261, 1103, 1147, 1292, 1419, 1643, 1675, 1727, 1742 |
| PspCI | CACGTG | 1 cut(s) | 1576 |
| PspGI | CCWGG | 9 cut(s) | 261, 1103, 1147, 1292, 1419, 1643, 1675, 1727, 1742 |
| PstI | CTGCAG | 1 cut(s) | 507 |
| PstNI | CAGNNNCTG | 2 cut(s) | 347, 554 |
| PsuI | RGATCY | 2 cut(s) | 1021, 1552 |
| PsyI | GACNNNGTC | 1 cut(s) | 884 |
| PvuI | CGATCG | 1 cut(s) | 735 |
| PvuII | CAGCTG | 1 cut(s) | 551 |
| RruI | TCGCGA | 4 cut(s) | 282, 629, 1194, 1536 |
| RsaI | GTAC | 5 cut(s) | 660, 801, 1068, 1175, 1787 |
| RsaNI | GTAC | 5 cut(s) | 659, 800, 1067, 1174, 1786 |
| RseI | CAYNNNNRTG | 1 cut(s) | 179 |
| SacI | GAGCTC | 1 cut(s) | 1168 |
| SacII | CCGCGG | 1 cut(s) | 834 |
| SalI | GTCGAC | 1 cut(s) | 170 |
| SapI | GCTCTTC | 1 cut(s) | 550 |
| SaqAI | TTAA | 1 cut(s) | 1263 |
| Sau3AI | GATC | 9 cut(s) | 16, 212, 375, 496, 732, 903, 1021, 1389, 1552 |
| ScaI | AGTACT | 2 cut(s) | 1068, 1175 |
| SduI | GDGCHC | 6 cut(s) | 250, 288, 458, 1116, 1133, 1168 |
| SfaNI | GCATC | 3 cut(s) | 193, 633, 1163 |
| SfcI | CTRYAG | 1 cut(s) | 503 |
| Sfr303I | CCGCGG | 1 cut(s) | 834 |
| SgrBI | CCGCGG | 1 cut(s) | 834 |
| SinI | GGWCC | 3 cut(s) | 519, 1410, 1648 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 179 |
| SmlI | CTYRAG | 5 cut(s) | 722, 789, 1177, 1460, 1527 |
| SmoI | CTYRAG | 5 cut(s) | 722, 789, 1177, 1460, 1527 |
| Sse9I | AATT | 9 cut(s) | 100, 149, 276, 641, 651, 686, 771, 861, 1436 |
| SspMI | CTAG | 8 cut(s) | 749, 765, 884, 1049, 1058, 1169, 1481, 1493 |
| SstI | GAGCTC | 1 cut(s) | 1168 |
| StyI | CCWWGG | 2 cut(s) | 441, 470 |
| TaaI | ACNGT | 3 cut(s) | 373, 430, 1621 |
| TaiI | ACGT | 3 cut(s) | 256, 639, 1578 |
| TaqI | TCGA | 5 cut(s) | 42, 171, 177, 499, 1063 |
| TasI | AATT | 9 cut(s) | 100, 149, 276, 641, 651, 686, 771, 861, 1436 |
| TatI | WGTACW | 4 cut(s) | 658, 1066, 1173, 1785 |
| TauI | GCSGC | 8 cut(s) | 137, 437, 740, 788, 833, 974, 1007, 1499 |
| TfiI | GAWTC | 4 cut(s) | 109, 398, 596, 1543 |
| Tru1I | TTAA | 1 cut(s) | 1263 |
| Tru9I | TTAA | 1 cut(s) | 1263 |
| TscAI | CASTG | 4 cut(s) | 352, 469, 1032, 1213 |
| TseFI | GTSAC | 1 cut(s) | 1738 |
| TseI | GCWGC | 6 cut(s) | 206, 437, 551, 851, 1007, 1010 |
| Tsp45I | GTSAC | 1 cut(s) | 1738 |
| TspDTI | ATGAA | 3 cut(s) | 498, 1008, 1281 |
| TspGWI | ACGGA | 2 cut(s) | 608, 1545 |
| TspRI | CASTG | 4 cut(s) | 352, 469, 1032, 1213 |
| Tth111I | GACNNNGTC | 1 cut(s) | 884 |
| Van91I | CCANNNNNTGG | 3 cut(s) | 314, 347, 1354 |
| VpaK11BI | GGWCC | 3 cut(s) | 519, 1410, 1648 |
| VspI | ATTAAT | 1 cut(s) | 1263 |
| XbaI | TCTAGA | 1 cut(s) | 1168 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1725 |
| XmiI | GTMKAC | 3 cut(s) | 51, 69, 171 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1542 |
| XspI | CTAG | 8 cut(s) | 749, 765, 884, 1049, 1058, 1169, 1481, 1493 |
| ZrmI | AGTACT | 2 cut(s) | 1068, 1175 |