No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 107 |
| AccII | CGCG | 4 cut(s) | 56, 398, 408, 413 |
| AccIII | TCCGGA | 1 cut(s) | 225 |
| AciI | CCGC | 8 cut(s) | 6, 49, 56, 293, 313, 401, 411, 599 |
| AfaI | GTAC | 1 cut(s) | 371 |
| AfiI | CCNNNNNNNGG | 9 cut(s) | 12, 55, 123, 145, 228, 249, 276, 292, 351 |
| AhlI | ACTAGT | 1 cut(s) | 94 |
| AjnI | CCWGG | 1 cut(s) | 260 |
| AluBI | AGCT | 3 cut(s) | 195, 433, 561 |
| AluI | AGCT | 3 cut(s) | 195, 433, 561 |
| Alw26I | GTCTC | 1 cut(s) | 501 |
| Ama87I | CYCGRG | 1 cut(s) | 22 |
| Aor13HI | TCCGGA | 1 cut(s) | 225 |
| AoxI | GGCC | 6 cut(s) | 26, 114, 267, 278, 480, 507 |
| ApaI | GGGCCC | 2 cut(s) | 271, 282 |
| ApeKI | GCWGC | 2 cut(s) | 192, 548 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 525 |
| AspLEI | GCGC | 3 cut(s) | 400, 410, 415 |
| AspS9I | GGNCC | 6 cut(s) | 115, 267, 268, 278, 279, 508 |
| AsuC2I | CCSGG | 1 cut(s) | 244 |
| AsuII | TTCGAA | 1 cut(s) | 308 |
| AsuNHI | GCTAGC | 1 cut(s) | 557 |
| AvaI | CYCGRG | 1 cut(s) | 22 |
| BaeGI | GKGCMC | 2 cut(s) | 271, 282 |
| BanII | GRGCYC | 3 cut(s) | 166, 271, 282 |
| BbvI | GCAGC | 2 cut(s) | 204, 535 |
| BccI | CCATC | 2 cut(s) | 230, 414 |
| BceAI | ACGGC | 2 cut(s) | 129, 495 |
| BciT130I | CCWGG | 1 cut(s) | 262 |
| BclI | TGATCA | 1 cut(s) | 120 |
| BcnI | CCSGG | 1 cut(s) | 244 |
| BcoDI | GTCTC | 1 cut(s) | 501 |
| BcuI | ACTAGT | 1 cut(s) | 94 |
| BfaI | CTAG | 2 cut(s) | 95, 558 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 421 |
| BisI | GCNGC | 5 cut(s) | 57, 193, 401, 411, 549 |
| BlsI | GCNGC | 5 cut(s) | 58, 194, 402, 412, 550 |
| Bme1390I | CCNGG | 2 cut(s) | 244, 262 |
| BmeT110I | CYCGRG | 1 cut(s) | 22 |
| BmgT120I | GGNCC | 6 cut(s) | 115, 267, 268, 278, 279, 508 |
| BmiI | GGNNCC | 4 cut(s) | 268, 269, 279, 280 |
| BmrFI | CCNGG | 2 cut(s) | 244, 262 |
| BmrI | ACTGGG | 1 cut(s) | 360 |
| BmsI | GCATC | 1 cut(s) | 433 |
| BmtI | GCTAGC | 1 cut(s) | 561 |
| BmuI | ACTGGG | 1 cut(s) | 360 |
| BoxI | GACNNNNGTC | 1 cut(s) | 138 |
| BpmI | CTGGAG | 1 cut(s) | 464 |
| Bpu14I | TTCGAA | 1 cut(s) | 308 |
| BpuMI | CCSGG | 1 cut(s) | 244 |
| BsaJI | CCNNGG | 4 cut(s) | 23, 243, 260, 261 |
| BsaWI | WCCGGW | 1 cut(s) | 225 |
| Bsc4I | CCNNNNNNNGG | 9 cut(s) | 12, 55, 123, 145, 228, 249, 276, 292, 351 |
| Bse1I | ACTGG | 2 cut(s) | 355, 447 |
| BseAI | TCCGGA | 1 cut(s) | 225 |
| BseBI | CCWGG | 1 cut(s) | 262 |
| BseDI | CCNNGG | 4 cut(s) | 23, 243, 260, 261 |
| BseGI | GGATG | 2 cut(s) | 222, 577 |
| BseLI | CCNNNNNNNGG | 9 cut(s) | 12, 55, 123, 145, 228, 249, 276, 292, 351 |
| BseMII | CTCAG | 2 cut(s) | 473, 512 |
| BseNI | ACTGG | 2 cut(s) | 355, 447 |
| BseSI | GKGCMC | 2 cut(s) | 271, 282 |
| BseXI | GCAGC | 2 cut(s) | 204, 535 |
| BseYI | CCCAGC | 1 cut(s) | 270 |
| BsgI | GTGCAG | 1 cut(s) | 211 |
| Bsh1236I | CGCG | 4 cut(s) | 56, 398, 408, 413 |
| BshFI | GGCC | 6 cut(s) | 28, 116, 269, 280, 482, 509 |
| BsiHKCI | CYCGRG | 1 cut(s) | 22 |
| BsiSI | CCGG | 2 cut(s) | 226, 243 |
| BslFI | GGGAC | 5 cut(s) | 97, 105, 268, 368, 377 |
| BslI | CCNNNNNNNGG | 9 cut(s) | 12, 55, 123, 145, 228, 249, 276, 292, 351 |
| BsmAI | GTCTC | 1 cut(s) | 501 |
| BsmFI | GGGAC | 5 cut(s) | 97, 105, 268, 368, 377 |
| BsnI | GGCC | 6 cut(s) | 28, 116, 269, 280, 482, 509 |
| BsoBI | CYCGRG | 1 cut(s) | 22 |
| Bsp119I | TTCGAA | 1 cut(s) | 308 |
| Bsp120I | GGGCCC | 2 cut(s) | 267, 278 |
| Bsp1286I | GDGCHC | 3 cut(s) | 166, 271, 282 |
| Bsp13I | TCCGGA | 1 cut(s) | 225 |
| Bsp143I | GATC | 2 cut(s) | 120, 384 |
| BspACI | CCGC | 8 cut(s) | 6, 49, 56, 293, 313, 401, 411, 599 |
| BspANI | GGCC | 6 cut(s) | 28, 116, 269, 280, 482, 509 |
| BspCNI | CTCAG | 2 cut(s) | 472, 511 |
| BspEI | TCCGGA | 1 cut(s) | 225 |
| BspFNI | CGCG | 4 cut(s) | 56, 398, 408, 413 |
| BspLI | GGNNCC | 4 cut(s) | 268, 269, 279, 280 |
| BspOI | GCTAGC | 1 cut(s) | 561 |
| BspQI | GCTCTTC | 1 cut(s) | 447 |
| BspT104I | TTCGAA | 1 cut(s) | 308 |
| BsrI | ACTGG | 2 cut(s) | 355, 447 |
| BssECI | CCNNGG | 4 cut(s) | 23, 243, 260, 261 |
| BssMI | GATC | 2 cut(s) | 120, 384 |
| Bst2UI | CCWGG | 1 cut(s) | 262 |
| Bst4CI | ACNGT | 1 cut(s) | 66 |
| Bst6I | CTCTTC | 1 cut(s) | 447 |
| BstBI | TTCGAA | 1 cut(s) | 308 |
| BstC8I | GCNNGC | 2 cut(s) | 166, 559 |
| BstDEI | CTNAG | 3 cut(s) | 459, 484, 498 |
| BstF5I | GGATG | 2 cut(s) | 222, 577 |
| BstFNI | CGCG | 4 cut(s) | 56, 398, 408, 413 |
| BstHHI | GCGC | 3 cut(s) | 400, 410, 415 |
| BstKTI | GATC | 2 cut(s) | 123, 387 |
| BstMAI | GTCTC | 1 cut(s) | 501 |
| BstMBI | GATC | 2 cut(s) | 120, 384 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 395, 421, 430, 454, 488, 521, 554 |
| BstNI | CCWGG | 1 cut(s) | 262 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 138 |
| BstSCI | CCNGG | 2 cut(s) | 242, 260 |
| BstSLI | GKGCMC | 2 cut(s) | 271, 282 |
| BstUI | CGCG | 4 cut(s) | 56, 398, 408, 413 |
| BstV1I | GCAGC | 2 cut(s) | 204, 535 |
| BsuRI | GGCC | 6 cut(s) | 28, 116, 269, 280, 482, 509 |
| BtgZI | GCGATG | 1 cut(s) | 506 |
| BtsCI | GGATG | 2 cut(s) | 222, 577 |
| BtsIMutI | CAGTG | 1 cut(s) | 36 |
| Cac8I | GCNNGC | 2 cut(s) | 166, 559 |
| CfoI | GCGC | 3 cut(s) | 400, 410, 415 |
| Cfr13I | GGNCC | 6 cut(s) | 115, 267, 268, 278, 279, 508 |
| CseI | GACGC | 2 cut(s) | 404, 563 |
| Csp6I | GTAC | 1 cut(s) | 370 |
| CviAII | CATG | 1 cut(s) | 596 |
| CviQI | GTAC | 1 cut(s) | 370 |
| DdeI | CTNAG | 3 cut(s) | 459, 484, 498 |
| DpnI | GATC | 2 cut(s) | 122, 386 |
| DpnII | GATC | 2 cut(s) | 120, 384 |
| Eam1104I | CTCTTC | 1 cut(s) | 447 |
| EarI | CTCTTC | 1 cut(s) | 447 |
| EciI | GGCGGA | 1 cut(s) | 308 |
| Eco24I | GRGCYC | 3 cut(s) | 166, 271, 282 |
| Eco88I | CYCGRG | 1 cut(s) | 22 |
| EcoO109I | RGGNCCY | 2 cut(s) | 267, 278 |
| EcoRII | CCWGG | 1 cut(s) | 260 |
| EcoT38I | GRGCYC | 3 cut(s) | 166, 271, 282 |
| FaeI | CATG | 1 cut(s) | 599 |
| FaiI | YATR | 1 cut(s) | 597 |
| FaqI | GGGAC | 5 cut(s) | 97, 105, 268, 368, 377 |
| FatI | CATG | 1 cut(s) | 595 |
| FauI | CCCGC | 1 cut(s) | 592 |
| FbaI | TGATCA | 1 cut(s) | 120 |
| FblI | GTMKAC | 1 cut(s) | 107 |
| Fnu4HI | GCNGC | 5 cut(s) | 57, 193, 401, 411, 549 |
| FokI | GGATG | 2 cut(s) | 209, 584 |
| FriOI | GRGCYC | 3 cut(s) | 166, 271, 282 |
| Fsp4HI | GCNGC | 5 cut(s) | 57, 193, 401, 411, 549 |
| FspBI | CTAG | 2 cut(s) | 95, 558 |
| GlaI | GCGC | 3 cut(s) | 399, 409, 414 |
| GluI | GCNGC | 5 cut(s) | 57, 193, 401, 411, 549 |
| GsaI | CCCAGC | 1 cut(s) | 274 |
| GsuI | CTGGAG | 1 cut(s) | 464 |
| HaeIII | GGCC | 6 cut(s) | 28, 116, 269, 280, 482, 509 |
| HapII | CCGG | 2 cut(s) | 226, 243 |
| HgaI | GACGC | 2 cut(s) | 404, 563 |
| HhaI | GCGC | 3 cut(s) | 400, 410, 415 |
| Hin1II | CATG | 1 cut(s) | 599 |
| Hin6I | GCGC | 3 cut(s) | 398, 408, 413 |
| HinP1I | GCGC | 3 cut(s) | 398, 408, 413 |
| HincII | GTYRAC | 1 cut(s) | 133 |
| HindII | GTYRAC | 1 cut(s) | 133 |
| HindIII | AAGCTT | 1 cut(s) | 431 |
| HinfI | GANTC | 1 cut(s) | 256 |
| HpaII | CCGG | 2 cut(s) | 226, 243 |
| Hpy166II | GTNNAC | 2 cut(s) | 108, 133 |
| Hpy188I | TCNGA | 5 cut(s) | 70, 429, 438, 462, 501 |
| Hpy188III | TCNNGA | 3 cut(s) | 22, 226, 569 |
| Hpy8I | GTNNAC | 2 cut(s) | 108, 133 |
| Hpy99I | CGWCG | 2 cut(s) | 115, 398 |
| HpyAV | CCTTC | 1 cut(s) | 83 |
| HpyCH4III | ACNGT | 1 cut(s) | 66 |
| HpyCH4IV | ACGT | 1 cut(s) | 129 |
| HpyCH4V | TGCA | 1 cut(s) | 192 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 395, 421, 430, 454, 488, 521, 554 |
| HpyF3I | CTNAG | 3 cut(s) | 459, 484, 498 |
| HpySE526I | ACGT | 1 cut(s) | 129 |
| Hsp92II | CATG | 1 cut(s) | 599 |
| HspAI | GCGC | 3 cut(s) | 398, 408, 413 |
| Kpn2I | TCCGGA | 1 cut(s) | 225 |
| Ksp22I | TGATCA | 1 cut(s) | 120 |
| Kzo9I | GATC | 2 cut(s) | 120, 384 |
| LguI | GCTCTTC | 1 cut(s) | 447 |
| LmnI | GCTCC | 3 cut(s) | 190, 200, 445 |
| Lsp1109I | GCAGC | 2 cut(s) | 204, 535 |
| LweI | GCATC | 1 cut(s) | 433 |
| MaeI | CTAG | 2 cut(s) | 95, 558 |
| MaeII | ACGT | 1 cut(s) | 129 |
| MaeIII | GTNAC | 1 cut(s) | 60 |
| MalI | GATC | 2 cut(s) | 122, 386 |
| MboI | GATC | 2 cut(s) | 120, 384 |
| MboII | GAAGA | 2 cut(s) | 229, 464 |
| MhlI | GDGCHC | 3 cut(s) | 166, 271, 282 |
| MluCI | AATT | 1 cut(s) | 211 |
| MlyI | GAGTC | 1 cut(s) | 250 |
| MnlI | CCTC | 8 cut(s) | 18, 44, 190, 211, 222, 289, 352, 468 |
| MroI | TCCGGA | 1 cut(s) | 225 |
| MroXI | GAANNNNTTC | 1 cut(s) | 525 |
| MslI | CAYNNNNRTG | 1 cut(s) | 147 |
| MspI | CCGG | 2 cut(s) | 226, 243 |
| MspR9I | CCNGG | 2 cut(s) | 244, 262 |
| MteI | GCGCNGCGC | 1 cut(s) | 411 |
| MvaI | CCWGG | 1 cut(s) | 262 |
| MvnI | CGCG | 4 cut(s) | 56, 398, 408, 413 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 395, 421, 430, 454, 488, 521, 554 |
| NciI | CCSGG | 1 cut(s) | 244 |
| NdeII | GATC | 2 cut(s) | 120, 384 |
| NheI | GCTAGC | 1 cut(s) | 557 |
| NlaIII | CATG | 1 cut(s) | 599 |
| NlaIV | GGNNCC | 4 cut(s) | 268, 269, 279, 280 |
| NspV | TTCGAA | 1 cut(s) | 308 |
| PasI | CCCWGGG | 1 cut(s) | 261 |
| PciSI | GCTCTTC | 1 cut(s) | 447 |
| PdmI | GAANNNNTTC | 1 cut(s) | 525 |
| PkrI | GCNGC | 5 cut(s) | 58, 194, 402, 412, 550 |
| PleI | GAGTC | 1 cut(s) | 250 |
| PpsI | GAGTC | 1 cut(s) | 250 |
| PshAI | GACNNNNGTC | 1 cut(s) | 138 |
| Psp6I | CCWGG | 1 cut(s) | 260 |
| PspFI | CCCAGC | 1 cut(s) | 270 |
| PspGI | CCWGG | 1 cut(s) | 260 |
| PspN4I | GGNNCC | 4 cut(s) | 268, 269, 279, 280 |
| PspOMI | GGGCCC | 2 cut(s) | 267, 278 |
| PspPI | GGNCC | 6 cut(s) | 115, 267, 268, 278, 279, 508 |
| RsaI | GTAC | 1 cut(s) | 371 |
| RsaNI | GTAC | 1 cut(s) | 370 |
| RseI | CAYNNNNRTG | 1 cut(s) | 147 |
| SapI | GCTCTTC | 1 cut(s) | 447 |
| SatI | GCNGC | 5 cut(s) | 57, 193, 401, 411, 549 |
| Sau3AI | GATC | 2 cut(s) | 120, 384 |
| Sau96I | GGNCC | 6 cut(s) | 115, 267, 268, 278, 279, 508 |
| SchI | GAGTC | 1 cut(s) | 250 |
| ScrFI | CCNGG | 2 cut(s) | 244, 262 |
| SduI | GDGCHC | 3 cut(s) | 166, 271, 282 |
| SetI | ASST | 6 cut(s) | 75, 132, 197, 233, 435, 563 |
| SfaNI | GCATC | 1 cut(s) | 433 |
| SfuI | TTCGAA | 1 cut(s) | 308 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 147 |
| SpeI | ACTAGT | 1 cut(s) | 94 |
| Sse9I | AATT | 1 cut(s) | 211 |
| SsiI | CCGC | 8 cut(s) | 6, 49, 56, 293, 313, 401, 411, 599 |
| SspMI | CTAG | 2 cut(s) | 95, 558 |
| StyD4I | CCNGG | 2 cut(s) | 242, 260 |
| TaaI | ACNGT | 1 cut(s) | 66 |
| TaiI | ACGT | 1 cut(s) | 132 |
| TaqI | TCGA | 3 cut(s) | 308, 529, 604 |
| TasI | AATT | 1 cut(s) | 211 |
| TauI | GCSGC | 3 cut(s) | 59, 403, 413 |
| TscAI | CASTG | 1 cut(s) | 43 |
| TseI | GCWGC | 2 cut(s) | 192, 548 |
| TspDTI | ATGAA | 1 cut(s) | 588 |
| TspGWI | ACGGA | 2 cut(s) | 28, 177 |
| TspRI | CASTG | 1 cut(s) | 43 |
| XmiI | GTMKAC | 1 cut(s) | 107 |
| XmnI | GAANNNNTTC | 1 cut(s) | 525 |
| XspI | CTAG | 2 cut(s) | 95, 558 |