No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 249 |
| Acc36I | ACCTGC | 2 cut(s) | 25, 409 |
| AccII | CGCG | 8 cut(s) | 186, 315, 379, 401, 438, 468, 495, 702 |
| AciI | CCGC | 9 cut(s) | 74, 117, 313, 379, 399, 401, 405, 438, 758 |
| AclWI | GGATC | 3 cut(s) | 389, 510, 518 |
| AcoI | YGGCCR | 1 cut(s) | 402 |
| AcsI | RAATTY | 1 cut(s) | 338 |
| AcuI | CTGAAG | 2 cut(s) | 159, 351 |
| AfaI | GTAC | 4 cut(s) | 60, 189, 306, 322 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 38, 98, 541 |
| AgsI | TTSAA | 1 cut(s) | 347 |
| AjnI | CCWGG | 4 cut(s) | 24, 246, 413, 663 |
| AluBI | AGCT | 4 cut(s) | 278, 287, 358, 720 |
| AluI | AGCT | 4 cut(s) | 278, 287, 358, 720 |
| Alw21I | GWGCWC | 3 cut(s) | 289, 360, 738 |
| Alw26I | GTCTC | 1 cut(s) | 660 |
| AlwI | GGATC | 3 cut(s) | 389, 510, 518 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 664 |
| AoxI | GGCC | 7 cut(s) | 75, 100, 402, 411, 439, 573, 594 |
| ApeKI | GCWGC | 8 cut(s) | 107, 110, 113, 238, 275, 278, 704, 707 |
| ApoI | RAATTY | 1 cut(s) | 338 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 684 |
| AspLEI | GCGC | 7 cut(s) | 275, 379, 607, 643, 676, 702, 704 |
| AspS9I | GGNCC | 7 cut(s) | 76, 101, 251, 531, 544, 574, 595 |
| AsuC2I | CCSGG | 1 cut(s) | 270 |
| AsuNHI | GCTAGC | 1 cut(s) | 716 |
| AvaII | GGWCC | 3 cut(s) | 251, 531, 544 |
| BanII | GRGCYC | 2 cut(s) | 289, 360 |
| Bbv12I | GWGCWC | 3 cut(s) | 289, 360, 738 |
| BbvI | GCAGC | 8 cut(s) | 94, 97, 100, 250, 265, 287, 691, 694 |
| BccI | CCATC | 2 cut(s) | 295, 332 |
| BceAI | ACGGC | 2 cut(s) | 609, 654 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 725, 759 |
| BciT130I | CCWGG | 4 cut(s) | 26, 248, 415, 665 |
| BcnI | CCSGG | 1 cut(s) | 270 |
| BcoDI | GTCTC | 1 cut(s) | 660 |
| BfaI | CTAG | 3 cut(s) | 476, 644, 717 |
| BfmI | CTRYAG | 1 cut(s) | 236 |
| BfoI | RGCGCY | 1 cut(s) | 644 |
| BfuAI | ACCTGC | 2 cut(s) | 25, 409 |
| BglI | GCCNNNNNGGC | 2 cut(s) | 410, 602 |
| Bme1390I | CCNGG | 5 cut(s) | 26, 248, 270, 415, 665 |
| Bme18I | GGWCC | 3 cut(s) | 251, 531, 544 |
| BmgT120I | GGNCC | 7 cut(s) | 76, 101, 251, 531, 544, 574, 595 |
| BmiI | GGNNCC | 6 cut(s) | 30, 78, 201, 252, 533, 615 |
| BmrFI | CCNGG | 5 cut(s) | 26, 248, 270, 415, 665 |
| BmsI | GCATC | 1 cut(s) | 112 |
| BmtI | GCTAGC | 1 cut(s) | 720 |
| Bpu10I | CCTNAGC | 1 cut(s) | 153 |
| BpuEI | CTTGAG | 3 cut(s) | 78, 273, 654 |
| BpuMI | CCSGG | 1 cut(s) | 270 |
| BsaJI | CCNNGG | 5 cut(s) | 24, 206, 247, 399, 570 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 38, 98, 541 |
| Bse1I | ACTGG | 1 cut(s) | 606 |
| BseBI | CCWGG | 4 cut(s) | 26, 248, 415, 665 |
| BseDI | CCNNGG | 5 cut(s) | 24, 206, 247, 399, 570 |
| BseGI | GGATG | 1 cut(s) | 736 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 38, 98, 541 |
| BseMII | CTCAG | 3 cut(s) | 144, 632, 671 |
| BseNI | ACTGG | 1 cut(s) | 606 |
| BsePI | GCGCGC | 1 cut(s) | 700 |
| BseRI | GAGGAG | 3 cut(s) | 138, 192, 626 |
| BseX3I | CGGCCG | 1 cut(s) | 402 |
| BseXI | GCAGC | 8 cut(s) | 94, 97, 100, 250, 265, 287, 691, 694 |
| Bsh1236I | CGCG | 8 cut(s) | 186, 315, 379, 401, 438, 468, 495, 702 |
| Bsh1285I | CGRYCG | 4 cut(s) | 84, 399, 405, 484 |
| BshFI | GGCC | 7 cut(s) | 77, 102, 404, 413, 441, 575, 596 |
| BsiEI | CGRYCG | 4 cut(s) | 84, 399, 405, 484 |
| BsiHKAI | GWGCWC | 3 cut(s) | 289, 360, 738 |
| BsiSI | CCGG | 1 cut(s) | 269 |
| BslFI | GGGAC | 1 cut(s) | 242 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 38, 98, 541 |
| BsmAI | GTCTC | 1 cut(s) | 660 |
| BsmFI | GGGAC | 1 cut(s) | 242 |
| BsnI | GGCC | 7 cut(s) | 77, 102, 404, 413, 441, 575, 596 |
| Bsp1286I | GDGCHC | 3 cut(s) | 289, 360, 738 |
| Bsp143I | GATC | 5 cut(s) | 81, 381, 481, 502, 510 |
| Bsp68I | TCGCGA | 1 cut(s) | 468 |
| BspACI | CCGC | 9 cut(s) | 74, 117, 313, 379, 399, 401, 405, 438, 758 |
| BspANI | GGCC | 7 cut(s) | 77, 102, 404, 413, 441, 575, 596 |
| BspCNI | CTCAG | 3 cut(s) | 145, 631, 670 |
| BspFNI | CGCG | 8 cut(s) | 186, 315, 379, 401, 438, 468, 495, 702 |
| BspLI | GGNNCC | 6 cut(s) | 30, 78, 201, 252, 533, 615 |
| BspMAI | CTGCAG | 1 cut(s) | 240 |
| BspMI | ACCTGC | 2 cut(s) | 25, 409 |
| BspOI | GCTAGC | 1 cut(s) | 720 |
| BspPI | GGATC | 3 cut(s) | 389, 510, 518 |
| BsrI | ACTGG | 1 cut(s) | 606 |
| BssECI | CCNNGG | 5 cut(s) | 24, 206, 247, 399, 570 |
| BssHII | GCGCGC | 1 cut(s) | 700 |
| BssMI | GATC | 5 cut(s) | 81, 381, 481, 502, 510 |
| BssT1I | CCWWGG | 2 cut(s) | 206, 570 |
| Bst2UI | CCWGG | 4 cut(s) | 26, 248, 415, 665 |
| Bst4CI | ACNGT | 2 cut(s) | 589, 685 |
| BstC8I | GCNNGC | 2 cut(s) | 702, 718 |
| BstDEI | CTNAG | 4 cut(s) | 153, 506, 618, 657 |
| BstDSI | CCRYGG | 1 cut(s) | 399 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 96 |
| BstF5I | GGATG | 1 cut(s) | 736 |
| BstFNI | CGCG | 8 cut(s) | 186, 315, 379, 401, 438, 468, 495, 702 |
| BstH2I | RGCGCY | 1 cut(s) | 644 |
| BstHHI | GCGC | 7 cut(s) | 275, 379, 607, 643, 676, 702, 704 |
| BstKTI | GATC | 5 cut(s) | 84, 384, 484, 505, 513 |
| BstMAI | GTCTC | 1 cut(s) | 660 |
| BstMBI | GATC | 5 cut(s) | 81, 381, 481, 502, 510 |
| BstMCI | CGRYCG | 4 cut(s) | 84, 399, 405, 484 |
| BstNI | CCWGG | 4 cut(s) | 26, 248, 415, 665 |
| BstSCI | CCNGG | 5 cut(s) | 24, 246, 268, 413, 663 |
| BstSFI | CTRYAG | 1 cut(s) | 236 |
| BstUI | CGCG | 8 cut(s) | 186, 315, 379, 401, 438, 468, 495, 702 |
| BstV1I | GCAGC | 8 cut(s) | 94, 97, 100, 250, 265, 287, 691, 694 |
| BstX2I | RGATCY | 2 cut(s) | 502, 510 |
| BstYI | RGATCY | 2 cut(s) | 502, 510 |
| BstZI | CGGCCG | 1 cut(s) | 402 |
| BsuRI | GGCC | 7 cut(s) | 77, 102, 404, 413, 441, 575, 596 |
| BtgI | CCRYGG | 1 cut(s) | 399 |
| BtgZI | GCGATG | 2 cut(s) | 118, 665 |
| BtsCI | GGATG | 1 cut(s) | 736 |
| BtsIMutI | CAGTG | 1 cut(s) | 327 |
| BtuMI | TCGCGA | 1 cut(s) | 468 |
| BveI | ACCTGC | 2 cut(s) | 25, 409 |
| Cac8I | GCNNGC | 2 cut(s) | 702, 718 |
| CaiI | CAGNNNCTG | 1 cut(s) | 664 |
| CciNI | GCGGCCGC | 1 cut(s) | 402 |
| CfoI | GCGC | 7 cut(s) | 275, 379, 607, 643, 676, 702, 704 |
| Cfr13I | GGNCC | 7 cut(s) | 76, 101, 251, 531, 544, 574, 595 |
| Cfr42I | CCGCGG | 1 cut(s) | 402 |
| CseI | GACGC | 2 cut(s) | 484, 722 |
| Csp6I | GTAC | 4 cut(s) | 59, 188, 305, 321 |
| CviAII | CATG | 1 cut(s) | 755 |
| CviQI | GTAC | 4 cut(s) | 59, 188, 305, 321 |
| DdeI | CTNAG | 4 cut(s) | 153, 506, 618, 657 |
| DpnI | GATC | 5 cut(s) | 83, 383, 483, 504, 512 |
| DpnII | GATC | 5 cut(s) | 81, 381, 481, 502, 510 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 249 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 249 |
| EaeI | YGGCCR | 1 cut(s) | 402 |
| EagI | CGGCCG | 1 cut(s) | 402 |
| Ecl136II | GAGCTC | 2 cut(s) | 287, 358 |
| EclXI | CGGCCG | 1 cut(s) | 402 |
| Eco130I | CCWWGG | 2 cut(s) | 206, 570 |
| Eco24I | GRGCYC | 2 cut(s) | 289, 360 |
| Eco32I | GATATC | 1 cut(s) | 130 |
| Eco47I | GGWCC | 3 cut(s) | 251, 531, 544 |
| Eco52I | CGGCCG | 1 cut(s) | 402 |
| Eco53kI | GAGCTC | 2 cut(s) | 287, 358 |
| Eco57I | CTGAAG | 2 cut(s) | 159, 351 |
| EcoICRI | GAGCTC | 2 cut(s) | 287, 358 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 96 |
| EcoO109I | RGGNCCY | 3 cut(s) | 101, 251, 544 |
| EcoRII | CCWGG | 4 cut(s) | 24, 246, 413, 663 |
| EcoRV | GATATC | 1 cut(s) | 130 |
| EcoT14I | CCWWGG | 2 cut(s) | 206, 570 |
| EcoT38I | GRGCYC | 2 cut(s) | 289, 360 |
| ErhI | CCWWGG | 2 cut(s) | 206, 570 |
| FaeI | CATG | 1 cut(s) | 758 |
| FaiI | YATR | 4 cut(s) | 50, 352, 354, 756 |
| FaqI | GGGAC | 1 cut(s) | 242 |
| FatI | CATG | 1 cut(s) | 754 |
| FauI | CCCGC | 1 cut(s) | 751 |
| FokI | GGATG | 1 cut(s) | 743 |
| FriOI | GRGCYC | 2 cut(s) | 289, 360 |
| FspBI | CTAG | 3 cut(s) | 476, 644, 717 |
| GlaI | GCGC | 7 cut(s) | 274, 378, 606, 642, 675, 701, 703 |
| HaeII | RGCGCY | 1 cut(s) | 644 |
| HaeIII | GGCC | 7 cut(s) | 77, 102, 404, 413, 441, 575, 596 |
| HapII | CCGG | 1 cut(s) | 269 |
| HgaI | GACGC | 2 cut(s) | 484, 722 |
| HhaI | GCGC | 7 cut(s) | 275, 379, 607, 643, 676, 702, 704 |
| Hin1II | CATG | 1 cut(s) | 758 |
| Hin6I | GCGC | 7 cut(s) | 273, 377, 605, 641, 674, 700, 702 |
| HinP1I | GCGC | 7 cut(s) | 273, 377, 605, 641, 674, 700, 702 |
| HinfI | GANTC | 4 cut(s) | 7, 243, 470, 490 |
| HpaII | CCGG | 1 cut(s) | 269 |
| Hpy188I | TCNGA | 4 cut(s) | 300, 531, 621, 660 |
| Hpy188III | TCNNGA | 8 cut(s) | 11, 32, 152, 254, 290, 467, 542, 728 |
| Hpy99I | CGWCG | 2 cut(s) | 89, 716 |
| HpyAV | CCTTC | 1 cut(s) | 536 |
| HpyCH4III | ACNGT | 2 cut(s) | 589, 685 |
| HpyCH4IV | ACGT | 1 cut(s) | 319 |
| HpyCH4V | TGCA | 4 cut(s) | 56, 238, 364, 446 |
| HpyF3I | CTNAG | 4 cut(s) | 153, 506, 618, 657 |
| HpySE526I | ACGT | 1 cut(s) | 319 |
| Hsp92II | CATG | 1 cut(s) | 758 |
| HspAI | GCGC | 7 cut(s) | 273, 377, 605, 641, 674, 700, 702 |
| KspI | CCGCGG | 1 cut(s) | 402 |
| Kzo9I | GATC | 5 cut(s) | 81, 381, 481, 502, 510 |
| LmnI | GCTCC | 2 cut(s) | 205, 613 |
| Lsp1109I | GCAGC | 8 cut(s) | 94, 97, 100, 250, 265, 287, 691, 694 |
| LweI | GCATC | 1 cut(s) | 112 |
| MaeI | CTAG | 3 cut(s) | 476, 644, 717 |
| MaeII | ACGT | 1 cut(s) | 319 |
| MaeIII | GTNAC | 2 cut(s) | 583, 589 |
| MalI | GATC | 5 cut(s) | 83, 383, 483, 504, 512 |
| MboI | GATC | 5 cut(s) | 81, 381, 481, 502, 510 |
| MboII | GAAGA | 2 cut(s) | 344, 362 |
| MflI | RGATCY | 2 cut(s) | 502, 510 |
| MhlI | GDGCHC | 3 cut(s) | 289, 360, 738 |
| MluCI | AATT | 2 cut(s) | 338, 578 |
| MlyI | GAGTC | 2 cut(s) | 237, 464 |
| MroXI | GAANNNNTTC | 1 cut(s) | 684 |
| MseI | TTAA | 1 cut(s) | 635 |
| MspA1I | CMGCKG | 3 cut(s) | 119, 278, 401 |
| MspI | CCGG | 1 cut(s) | 269 |
| MspR9I | CCNGG | 5 cut(s) | 26, 248, 270, 415, 665 |
| MvaI | CCWGG | 4 cut(s) | 26, 248, 415, 665 |
| MvnI | CGCG | 8 cut(s) | 186, 315, 379, 401, 438, 468, 495, 702 |
| NciI | CCSGG | 1 cut(s) | 270 |
| NdeII | GATC | 5 cut(s) | 81, 381, 481, 502, 510 |
| NheI | GCTAGC | 1 cut(s) | 716 |
| NlaIII | CATG | 1 cut(s) | 758 |
| NlaIV | GGNNCC | 6 cut(s) | 30, 78, 201, 252, 533, 615 |
| NmuCI | GTSAC | 2 cut(s) | 583, 589 |
| NotI | GCGGCCGC | 1 cut(s) | 402 |
| NruI | TCGCGA | 1 cut(s) | 468 |
| PauI | GCGCGC | 1 cut(s) | 700 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 316 |
| PdmI | GAANNNNTTC | 1 cut(s) | 684 |
| PfeI | GAWTC | 2 cut(s) | 7, 490 |
| Ple19I | CGATCG | 2 cut(s) | 84, 484 |
| PleI | GAGTC | 2 cut(s) | 237, 464 |
| PpsI | GAGTC | 2 cut(s) | 237, 464 |
| PpuMI | RGGWCCY | 2 cut(s) | 251, 544 |
| Psp124BI | GAGCTC | 2 cut(s) | 289, 360 |
| Psp5II | RGGWCCY | 2 cut(s) | 251, 544 |
| Psp6I | CCWGG | 4 cut(s) | 24, 246, 413, 663 |
| PspGI | CCWGG | 4 cut(s) | 24, 246, 413, 663 |
| PspN4I | GGNNCC | 6 cut(s) | 30, 78, 201, 252, 533, 615 |
| PspPI | GGNCC | 7 cut(s) | 76, 101, 251, 531, 544, 574, 595 |
| PspPPI | RGGWCCY | 2 cut(s) | 251, 544 |
| PstI | CTGCAG | 1 cut(s) | 240 |
| PstNI | CAGNNNCTG | 1 cut(s) | 664 |
| PsuI | RGATCY | 2 cut(s) | 502, 510 |
| PteI | GCGCGC | 1 cut(s) | 700 |
| PvuI | CGATCG | 2 cut(s) | 84, 484 |
| PvuII | CAGCTG | 1 cut(s) | 278 |
| RruI | TCGCGA | 1 cut(s) | 468 |
| RsaI | GTAC | 4 cut(s) | 60, 189, 306, 322 |
| RsaNI | GTAC | 4 cut(s) | 59, 188, 305, 321 |
| SacI | GAGCTC | 2 cut(s) | 289, 360 |
| SacII | CCGCGG | 1 cut(s) | 402 |
| SaqAI | TTAA | 1 cut(s) | 635 |
| Sau3AI | GATC | 5 cut(s) | 81, 381, 481, 502, 510 |
| Sau96I | GGNCC | 7 cut(s) | 76, 101, 251, 531, 544, 574, 595 |
| SchI | GAGTC | 2 cut(s) | 237, 464 |
| ScrFI | CCNGG | 5 cut(s) | 26, 248, 270, 415, 665 |
| SduI | GDGCHC | 3 cut(s) | 289, 360, 738 |
| SfaNI | GCATC | 1 cut(s) | 112 |
| SfcI | CTRYAG | 1 cut(s) | 236 |
| SfiI | GGCCNNNNNGGCC | 1 cut(s) | 410 |
| Sfr303I | CCGCGG | 1 cut(s) | 402 |
| SgrBI | CCGCGG | 1 cut(s) | 402 |
| SinI | GGWCC | 3 cut(s) | 251, 531, 544 |
| SmlI | CTYRAG | 3 cut(s) | 93, 288, 669 |
| SmoI | CTYRAG | 3 cut(s) | 93, 288, 669 |
| Sse9I | AATT | 2 cut(s) | 338, 578 |
| SsiI | CCGC | 9 cut(s) | 74, 117, 313, 379, 399, 401, 405, 438, 758 |
| SspMI | CTAG | 3 cut(s) | 476, 644, 717 |
| SstI | GAGCTC | 2 cut(s) | 289, 360 |
| StyD4I | CCNGG | 5 cut(s) | 24, 246, 268, 413, 663 |
| StyI | CCWWGG | 2 cut(s) | 206, 570 |
| TaaI | ACNGT | 2 cut(s) | 589, 685 |
| TaiI | ACGT | 1 cut(s) | 322 |
| TaqI | TCGA | 6 cut(s) | 87, 192, 484, 564, 688, 763 |
| TasI | AATT | 2 cut(s) | 338, 578 |
| TauI | GCSGC | 6 cut(s) | 77, 119, 315, 404, 407, 441 |
| TfiI | GAWTC | 2 cut(s) | 7, 490 |
| Tru1I | TTAA | 1 cut(s) | 635 |
| Tru9I | TTAA | 1 cut(s) | 635 |
| TscAI | CASTG | 1 cut(s) | 334 |
| TseFI | GTSAC | 2 cut(s) | 583, 589 |
| TseI | GCWGC | 8 cut(s) | 107, 110, 113, 238, 275, 278, 704, 707 |
| Tsp45I | GTSAC | 2 cut(s) | 583, 589 |
| TspDTI | ATGAA | 3 cut(s) | 234, 351, 402 |
| TspRI | CASTG | 1 cut(s) | 334 |
| VpaK11BI | GGWCC | 3 cut(s) | 251, 531, 544 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 96 |
| XapI | RAATTY | 1 cut(s) | 338 |
| XmnI | GAANNNNTTC | 1 cut(s) | 684 |
| XspI | CTAG | 3 cut(s) | 476, 644, 717 |