Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 371 |
| AccB1I | GGYRCC | 3 cut(s) | 83, 157, 269 |
| AccI | GTMKAC | 1 cut(s) | 220 |
| AccII | CGCG | 5 cut(s) | 285, 342, 349, 421, 423 |
| AciI | CCGC | 7 cut(s) | 88, 349, 419, 423, 471, 690, 796 |
| AclWI | GGATC | 2 cut(s) | 633, 646 |
| AcoI | YGGCCR | 2 cut(s) | 183, 302 |
| AfaI | GTAC | 2 cut(s) | 710, 760 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 66, 67, 294, 554 |
| AgeI | ACCGGT | 1 cut(s) | 817 |
| AhlI | ACTAGT | 1 cut(s) | 755 |
| AjnI | CCWGG | 2 cut(s) | 247, 702 |
| AluBI | AGCT | 1 cut(s) | 264 |
| AluI | AGCT | 1 cut(s) | 264 |
| Alw21I | GWGCWC | 1 cut(s) | 678 |
| Alw26I | GTCTC | 2 cut(s) | 320, 770 |
| AlwI | GGATC | 2 cut(s) | 633, 646 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 264 |
| AoxI | GGCC | 6 cut(s) | 183, 205, 302, 447, 609, 780 |
| ApeKI | GCWGC | 4 cut(s) | 377, 426, 439, 624 |
| AsiGI | ACCGGT | 1 cut(s) | 817 |
| AspLEI | GCGC | 4 cut(s) | 166, 287, 423, 629 |
| AspS9I | GGNCC | 3 cut(s) | 243, 610, 781 |
| AsuC2I | CCSGG | 2 cut(s) | 446, 671 |
| AsuHPI | GGTGA | 2 cut(s) | 505, 529 |
| AvaII | GGWCC | 1 cut(s) | 243 |
| BaeGI | GKGCMC | 2 cut(s) | 88, 274 |
| BamHI | GGATCC | 1 cut(s) | 638 |
| BanI | GGYRCC | 3 cut(s) | 83, 157, 269 |
| Bbv12I | GWGCWC | 1 cut(s) | 678 |
| BbvI | GCAGC | 4 cut(s) | 389, 413, 426, 636 |
| BccI | CCATC | 7 cut(s) | 116, 288, 320, 420, 542, 548, 645 |
| BceAI | ACGGC | 2 cut(s) | 289, 795 |
| BciT130I | CCWGG | 2 cut(s) | 249, 704 |
| BcnI | CCSGG | 2 cut(s) | 446, 671 |
| BcoDI | GTCTC | 2 cut(s) | 320, 770 |
| BcuI | ACTAGT | 1 cut(s) | 755 |
| BfaI | CTAG | 2 cut(s) | 756, 773 |
| BfoI | RGCGCY | 2 cut(s) | 167, 630 |
| BfuAI | ACCTGC | 1 cut(s) | 371 |
| BglII | AGATCT | 1 cut(s) | 358 |
| BisI | GCNGC | 6 cut(s) | 378, 424, 427, 440, 625, 796 |
| BlsI | GCNGC | 6 cut(s) | 379, 425, 428, 441, 626, 797 |
| BmcAI | AGTACT | 2 cut(s) | 710, 760 |
| Bme1390I | CCNGG | 4 cut(s) | 249, 446, 671, 704 |
| Bme18I | GGWCC | 1 cut(s) | 243 |
| BmgT120I | GGNCC | 3 cut(s) | 243, 610, 781 |
| BmiI | GGNNCC | 7 cut(s) | 6, 73, 85, 159, 245, 271, 640 |
| BmrFI | CCNGG | 4 cut(s) | 249, 446, 671, 704 |
| BmsI | GCATC | 2 cut(s) | 163, 519 |
| BpmI | CTGGAG | 2 cut(s) | 270, 725 |
| BpuMI | CCSGG | 2 cut(s) | 446, 671 |
| Bsa29I | ATCGAT | 1 cut(s) | 27 |
| BsaJI | CCNNGG | 2 cut(s) | 247, 606 |
| BsaWI | WCCGGW | 2 cut(s) | 149, 817 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 108, 138 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 66, 67, 294, 554 |
| Bse118I | RCCGGY | 3 cut(s) | 539, 686, 817 |
| Bse1I | ACTGG | 4 cut(s) | 159, 212, 230, 716 |
| Bse3DI | GCAATG | 1 cut(s) | 805 |
| BseBI | CCWGG | 2 cut(s) | 249, 704 |
| BseCI | ATCGAT | 1 cut(s) | 27 |
| BseDI | CCNNGG | 2 cut(s) | 247, 606 |
| BseGI | GGATG | 2 cut(s) | 104, 108 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 66, 67, 294, 554 |
| BseMI | GCAATG | 1 cut(s) | 805 |
| BseNI | ACTGG | 4 cut(s) | 159, 212, 230, 716 |
| BseRI | GAGGAG | 1 cut(s) | 116 |
| BseSI | GKGCMC | 2 cut(s) | 88, 274 |
| BseX3I | CGGCCG | 1 cut(s) | 183 |
| BseXI | GCAGC | 4 cut(s) | 389, 413, 426, 636 |
| BseYI | CCCAGC | 2 cut(s) | 264, 612 |
| BsgI | GTGCAG | 1 cut(s) | 718 |
| Bsh1236I | CGCG | 5 cut(s) | 285, 342, 349, 421, 423 |
| Bsh1285I | CGRYCG | 3 cut(s) | 186, 622, 687 |
| BshFI | GGCC | 6 cut(s) | 185, 207, 304, 449, 611, 782 |
| BshNI | GGYRCC | 3 cut(s) | 83, 157, 269 |
| BshTI | ACCGGT | 1 cut(s) | 817 |
| BshVI | ATCGAT | 1 cut(s) | 27 |
| BsiEI | CGRYCG | 3 cut(s) | 186, 622, 687 |
| BsiHKAI | GWGCWC | 1 cut(s) | 678 |
| BsiSI | CCGG | 7 cut(s) | 150, 182, 446, 540, 670, 687, 818 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 66, 67, 294, 554 |
| BsmAI | GTCTC | 2 cut(s) | 320, 770 |
| BsmBI | CGTCTC | 1 cut(s) | 770 |
| BsmI | GAATGC | 2 cut(s) | 90, 379 |
| BsnI | GGCC | 6 cut(s) | 185, 207, 304, 449, 611, 782 |
| Bsp1286I | GDGCHC | 3 cut(s) | 88, 274, 678 |
| Bsp143I | GATC | 5 cut(s) | 28, 54, 358, 400, 638 |
| Bsp19I | CCATGG | 1 cut(s) | 606 |
| Bsp68I | TCGCGA | 1 cut(s) | 342 |
| BspACI | CCGC | 7 cut(s) | 88, 349, 419, 423, 471, 690, 796 |
| BspANI | GGCC | 6 cut(s) | 185, 207, 304, 449, 611, 782 |
| BspDI | ATCGAT | 1 cut(s) | 27 |
| BspFNI | CGCG | 5 cut(s) | 285, 342, 349, 421, 423 |
| BspLI | GGNNCC | 7 cut(s) | 6, 73, 85, 159, 245, 271, 640 |
| BspMI | ACCTGC | 1 cut(s) | 371 |
| BspPI | GGATC | 2 cut(s) | 633, 646 |
| BspT107I | GGYRCC | 3 cut(s) | 83, 157, 269 |
| BsrDI | GCAATG | 1 cut(s) | 805 |
| BsrFI | RCCGGY | 3 cut(s) | 539, 686, 817 |
| BsrI | ACTGG | 4 cut(s) | 159, 212, 230, 716 |
| BssAI | RCCGGY | 3 cut(s) | 539, 686, 817 |
| BssECI | CCNNGG | 2 cut(s) | 247, 606 |
| BssMI | GATC | 5 cut(s) | 28, 54, 358, 400, 638 |
| BssT1I | CCWWGG | 1 cut(s) | 606 |
| Bst2UI | CCWGG | 2 cut(s) | 249, 704 |
| Bst4CI | ACNGT | 2 cut(s) | 620, 635 |
| Bst6I | CTCTTC | 2 cut(s) | 745, 774 |
| BstC8I | GCNNGC | 6 cut(s) | 88, 162, 367, 437, 545, 749 |
| BstDSI | CCRYGG | 1 cut(s) | 606 |
| BstF5I | GGATG | 2 cut(s) | 104, 108 |
| BstFNI | CGCG | 5 cut(s) | 285, 342, 349, 421, 423 |
| BstH2I | RGCGCY | 2 cut(s) | 167, 630 |
| BstHHI | GCGC | 4 cut(s) | 166, 287, 423, 629 |
| BstKTI | GATC | 5 cut(s) | 31, 57, 361, 403, 641 |
| BstMAI | GTCTC | 2 cut(s) | 320, 770 |
| BstMBI | GATC | 5 cut(s) | 28, 54, 358, 400, 638 |
| BstMCI | CGRYCG | 3 cut(s) | 186, 622, 687 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 182, 432 |
| BstNI | CCWGG | 2 cut(s) | 249, 704 |
| BstSCI | CCNGG | 4 cut(s) | 247, 444, 669, 702 |
| BstSLI | GKGCMC | 2 cut(s) | 88, 274 |
| BstUI | CGCG | 5 cut(s) | 285, 342, 349, 421, 423 |
| BstV1I | GCAGC | 4 cut(s) | 389, 413, 426, 636 |
| BstX2I | RGATCY | 2 cut(s) | 358, 638 |
| BstYI | RGATCY | 2 cut(s) | 358, 638 |
| BstZI | CGGCCG | 1 cut(s) | 183 |
| Bsu15I | ATCGAT | 1 cut(s) | 27 |
| BsuRI | GGCC | 6 cut(s) | 185, 207, 304, 449, 611, 782 |
| BsuTUI | ATCGAT | 1 cut(s) | 27 |
| BtgI | CCRYGG | 1 cut(s) | 606 |
| BtgZI | GCGATG | 1 cut(s) | 266 |
| BtsCI | GGATG | 2 cut(s) | 104, 108 |
| BtsIMutI | CAGTG | 1 cut(s) | 640 |
| BtuMI | TCGCGA | 1 cut(s) | 342 |
| BveI | ACCTGC | 1 cut(s) | 371 |
| Cac8I | GCNNGC | 6 cut(s) | 88, 162, 367, 437, 545, 749 |
| CaiI | CAGNNNCTG | 1 cut(s) | 264 |
| CfoI | GCGC | 4 cut(s) | 166, 287, 423, 629 |
| Cfr10I | RCCGGY | 3 cut(s) | 539, 686, 817 |
| Cfr13I | GGNCC | 3 cut(s) | 243, 610, 781 |
| ClaI | ATCGAT | 1 cut(s) | 27 |
| Csp6I | GTAC | 2 cut(s) | 709, 759 |
| CspAI | ACCGGT | 1 cut(s) | 817 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 636, 671 |
| CviAII | CATG | 2 cut(s) | 572, 607 |
| CviQI | GTAC | 2 cut(s) | 709, 759 |
| DpnI | GATC | 5 cut(s) | 30, 56, 360, 402, 640 |
| DpnII | GATC | 5 cut(s) | 28, 54, 358, 400, 638 |
| EaeI | YGGCCR | 2 cut(s) | 183, 302 |
| EagI | CGGCCG | 1 cut(s) | 183 |
| Eam1104I | CTCTTC | 2 cut(s) | 745, 774 |
| EarI | CTCTTC | 2 cut(s) | 745, 774 |
| EciI | GGCGGA | 1 cut(s) | 705 |
| EclXI | CGGCCG | 1 cut(s) | 183 |
| Eco130I | CCWWGG | 1 cut(s) | 606 |
| Eco47I | GGWCC | 1 cut(s) | 243 |
| Eco52I | CGGCCG | 1 cut(s) | 183 |
| EcoO109I | RGGNCCY | 1 cut(s) | 243 |
| EcoRII | CCWGG | 2 cut(s) | 247, 702 |
| EcoT14I | CCWWGG | 1 cut(s) | 606 |
| ErhI | CCWWGG | 1 cut(s) | 606 |
| Esp3I | CGTCTC | 1 cut(s) | 770 |
| FaeI | CATG | 2 cut(s) | 575, 610 |
| FaiI | YATR | 7 cut(s) | 204, 393, 406, 573, 608, 728, 826 |
| FatI | CATG | 2 cut(s) | 571, 606 |
| FauI | CCCGC | 2 cut(s) | 95, 342 |
| FblI | GTMKAC | 1 cut(s) | 220 |
| Fnu4HI | GCNGC | 6 cut(s) | 378, 424, 427, 440, 625, 796 |
| FokI | GGATG | 2 cut(s) | 91, 95 |
| Fsp4HI | GCNGC | 6 cut(s) | 378, 424, 427, 440, 625, 796 |
| FspBI | CTAG | 2 cut(s) | 756, 773 |
| GlaI | GCGC | 4 cut(s) | 165, 286, 422, 628 |
| GluI | GCNGC | 6 cut(s) | 378, 424, 427, 440, 625, 796 |
| GsaI | CCCAGC | 2 cut(s) | 268, 616 |
| GsuI | CTGGAG | 2 cut(s) | 270, 725 |
| HaeII | RGCGCY | 2 cut(s) | 167, 630 |
| HaeIII | GGCC | 6 cut(s) | 185, 207, 304, 449, 611, 782 |
| HapII | CCGG | 7 cut(s) | 150, 182, 446, 540, 670, 687, 818 |
| HhaI | GCGC | 4 cut(s) | 166, 287, 423, 629 |
| Hin1II | CATG | 2 cut(s) | 575, 610 |
| Hin6I | GCGC | 4 cut(s) | 164, 285, 421, 627 |
| HinP1I | GCGC | 4 cut(s) | 164, 285, 421, 627 |
| HincII | GTYRAC | 2 cut(s) | 221, 592 |
| HindII | GTYRAC | 2 cut(s) | 221, 592 |
| HinfI | GANTC | 6 cut(s) | 132, 188, 495, 584, 693, 766 |
| HpaII | CCGG | 7 cut(s) | 150, 182, 446, 540, 670, 687, 818 |
| HphI | GGTGA | 2 cut(s) | 505, 529 |
| Hpy166II | GTNNAC | 2 cut(s) | 221, 592 |
| Hpy188I | TCNGA | 2 cut(s) | 131, 139 |
| Hpy188III | TCNNGA | 4 cut(s) | 32, 341, 463, 773 |
| Hpy8I | GTNNAC | 2 cut(s) | 221, 592 |
| Hpy99I | CGWCG | 1 cut(s) | 222 |
| HpyAV | CCTTC | 1 cut(s) | 460 |
| HpyCH4III | ACNGT | 2 cut(s) | 620, 635 |
| HpyCH4V | TGCA | 6 cut(s) | 377, 429, 571, 720, 735, 747 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 182, 432 |
| Hsp92II | CATG | 2 cut(s) | 575, 610 |
| HspAI | GCGC | 4 cut(s) | 164, 285, 421, 627 |
| Kzo9I | GATC | 5 cut(s) | 28, 54, 358, 400, 638 |
| LmnI | GCTCC | 4 cut(s) | 10, 129, 447, 673 |
| Lsp1109I | GCAGC | 4 cut(s) | 389, 413, 426, 636 |
| LweI | GCATC | 2 cut(s) | 163, 519 |
| MaeI | CTAG | 2 cut(s) | 756, 773 |
| MalI | GATC | 5 cut(s) | 30, 56, 360, 402, 640 |
| MboI | GATC | 5 cut(s) | 28, 54, 358, 400, 638 |
| MboII | GAAGA | 6 cut(s) | 25, 50, 86, 407, 732, 761 |
| MflI | RGATCY | 2 cut(s) | 358, 638 |
| MhlI | GDGCHC | 3 cut(s) | 88, 274, 678 |
| MluCI | AATT | 1 cut(s) | 578 |
| MlyI | GAGTC | 2 cut(s) | 182, 760 |
| MmeI | TCCRAC | 1 cut(s) | 162 |
| MnlI | CCTC | 6 cut(s) | 28, 137, 245, 319, 748, 794 |
| MspI | CCGG | 7 cut(s) | 150, 182, 446, 540, 670, 687, 818 |
| MspR9I | CCNGG | 4 cut(s) | 249, 446, 671, 704 |
| Mva1269I | GAATGC | 2 cut(s) | 90, 379 |
| MvaI | CCWGG | 2 cut(s) | 249, 704 |
| MvnI | CGCG | 5 cut(s) | 285, 342, 349, 421, 423 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 182, 432 |
| NciI | CCSGG | 2 cut(s) | 446, 671 |
| NcoI | CCATGG | 1 cut(s) | 606 |
| NdeII | GATC | 5 cut(s) | 28, 54, 358, 400, 638 |
| NlaIII | CATG | 2 cut(s) | 575, 610 |
| NlaIV | GGNNCC | 7 cut(s) | 6, 73, 85, 159, 245, 271, 640 |
| NruI | TCGCGA | 1 cut(s) | 342 |
| PctI | GAATGC | 2 cut(s) | 90, 379 |
| PfeI | GAWTC | 4 cut(s) | 132, 495, 584, 693 |
| PfoI | TCCNGGA | 1 cut(s) | 702 |
| PinAI | ACCGGT | 1 cut(s) | 817 |
| PkrI | GCNGC | 6 cut(s) | 379, 425, 428, 441, 626, 797 |
| PleI | GAGTC | 2 cut(s) | 182, 760 |
| PpsI | GAGTC | 2 cut(s) | 182, 760 |
| PpuMI | RGGWCCY | 1 cut(s) | 243 |
| Psp5II | RGGWCCY | 1 cut(s) | 243 |
| Psp6I | CCWGG | 2 cut(s) | 247, 702 |
| PspFI | CCCAGC | 2 cut(s) | 264, 612 |
| PspGI | CCWGG | 2 cut(s) | 247, 702 |
| PspN4I | GGNNCC | 7 cut(s) | 6, 73, 85, 159, 245, 271, 640 |
| PspPI | GGNCC | 3 cut(s) | 243, 610, 781 |
| PspPPI | RGGWCCY | 1 cut(s) | 243 |
| PstNI | CAGNNNCTG | 1 cut(s) | 264 |
| PsuI | RGATCY | 2 cut(s) | 358, 638 |
| RruI | TCGCGA | 1 cut(s) | 342 |
| RsaI | GTAC | 2 cut(s) | 710, 760 |
| RsaNI | GTAC | 2 cut(s) | 709, 759 |
| SalI | GTCGAC | 1 cut(s) | 219 |
| SatI | GCNGC | 6 cut(s) | 378, 424, 427, 440, 625, 796 |
| Sau3AI | GATC | 5 cut(s) | 28, 54, 358, 400, 638 |
| Sau96I | GGNCC | 3 cut(s) | 243, 610, 781 |
| ScaI | AGTACT | 2 cut(s) | 710, 760 |
| SchI | GAGTC | 2 cut(s) | 182, 760 |
| ScrFI | CCNGG | 4 cut(s) | 249, 446, 671, 704 |
| SduI | GDGCHC | 3 cut(s) | 88, 274, 678 |
| SetI | ASST | 3 cut(s) | 266, 385, 740 |
| SfaNI | GCATC | 2 cut(s) | 163, 519 |
| SinI | GGWCC | 1 cut(s) | 243 |
| SpeI | ACTAGT | 1 cut(s) | 755 |
| Sse9I | AATT | 1 cut(s) | 578 |
| SsiI | CCGC | 7 cut(s) | 88, 349, 419, 423, 471, 690, 796 |
| SspMI | CTAG | 2 cut(s) | 756, 773 |
| StyD4I | CCNGG | 4 cut(s) | 247, 444, 669, 702 |
| StyI | CCWWGG | 1 cut(s) | 606 |
| TaaI | ACNGT | 2 cut(s) | 620, 635 |
| TaqI | TCGA | 4 cut(s) | 27, 220, 582, 602 |
| TasI | AATT | 1 cut(s) | 578 |
| TatI | WGTACW | 2 cut(s) | 708, 758 |
| TauI | GCSGC | 2 cut(s) | 426, 798 |
| TfiI | GAWTC | 4 cut(s) | 132, 495, 584, 693 |
| TscAI | CASTG | 1 cut(s) | 640 |
| TseI | GCWGC | 4 cut(s) | 377, 426, 439, 624 |
| TspDTI | ATGAA | 1 cut(s) | 715 |
| TspGWI | ACGGA | 1 cut(s) | 206 |
| TspRI | CASTG | 1 cut(s) | 640 |
| VpaK11BI | GGWCC | 1 cut(s) | 243 |
| XbaI | TCTAGA | 1 cut(s) | 772 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 245 |
| XmiI | GTMKAC | 1 cut(s) | 220 |
| XspI | CTAG | 2 cut(s) | 756, 773 |
| ZrmI | AGTACT | 2 cut(s) | 710, 760 |