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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 507 |
| Acc16I | TGCGCA | 1 cut(s) | 1284 |
| Acc36I | ACCTGC | 1 cut(s) | 649 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 314, 347 |
| AccI | GTMKAC | 2 cut(s) | 69, 1841 |
| AccII | CGCG | 8 cut(s) | 282, 324, 380, 830, 1344, 1533, 1652, 1745 |
| AclWI | GGATC | 5 cut(s) | 895, 1013, 1394, 1751, 1764 |
| AcoI | YGGCCR | 4 cut(s) | 135, 349, 825, 840 |
| AcuI | CTGAAG | 5 cut(s) | 219, 408, 528, 873, 948 |
| AcyI | GRCGYC | 1 cut(s) | 45 |
| AfaI | GTAC | 6 cut(s) | 738, 798, 1065, 1172, 1726, 1991 |
| AflII | CTTAAG | 1 cut(s) | 1457 |
| AflIII | ACRYGT | 1 cut(s) | 1650 |
| AgeI | ACCGGT | 1 cut(s) | 238 |
| AgsI | TTSAA | 9 cut(s) | 154, 395, 1427, 1502, 1631, 1659, 1690, 1721, 1731 |
| AjiI | CACGTC | 2 cut(s) | 254, 634 |
| AjnI | CCWGG | 8 cut(s) | 261, 1100, 1144, 1289, 1416, 1879, 1931, 1946 |
| AleI | CACNNNNGTG | 1 cut(s) | 623 |
| AluBI | AGCT | 8 cut(s) | 675, 793, 995, 1033, 1058, 1163, 1298, 1559 |
| AluI | AGCT | 8 cut(s) | 675, 793, 995, 1033, 1058, 1163, 1298, 1559 |
| Alw21I | GWGCWC | 1 cut(s) | 1165 |
| Alw26I | GTCTC | 7 cut(s) | 649, 1202, 1371, 1515, 1767, 1857, 1912 |
| AlwI | GGATC | 5 cut(s) | 895, 1013, 1394, 1751, 1764 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 347, 551 |
| Ama87I | CYCGRG | 1 cut(s) | 1059 |
| ApeKI | GCWGC | 7 cut(s) | 167, 206, 437, 848, 1007, 1559, 1562 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 113, 145 |
| AseI | ATTAAT | 1 cut(s) | 1260 |
| AsiGI | ACCGGT | 1 cut(s) | 238 |
| AspLEI | GCGC | 7 cut(s) | 326, 456, 586, 760, 1151, 1285, 1908 |
| AsuC2I | CCSGG | 4 cut(s) | 774, 1083, 1453, 1849 |
| AsuHPI | GGTGA | 8 cut(s) | 253, 385, 566, 788, 955, 1210, 1456, 1936 |
| AsuNHI | GCTAGC | 1 cut(s) | 1054 |
| AvaI | CYCGRG | 1 cut(s) | 1059 |
| AvaII | GGWCC | 3 cut(s) | 516, 1407, 1852 |
| AxyI | CCTNAGG | 1 cut(s) | 720 |
| BalI | TGGCCA | 1 cut(s) | 351 |
| BamHI | GGATCC | 1 cut(s) | 1756 |
| BanII | GRGCYC | 5 cut(s) | 250, 288, 1113, 1130, 1165 |
| BauI | CACGAG | 1 cut(s) | 815 |
| BbsI | GAAGAC | 2 cut(s) | 897, 1638 |
| Bbv12I | GWGCWC | 1 cut(s) | 1165 |
| BbvI | GCAGC | 7 cut(s) | 154, 193, 424, 835, 994, 1546, 1549 |
| BccI | CCATC | 8 cut(s) | 146, 629, 1100, 1706, 1746, 1930, 1936, 1955 |
| BceAI | ACGGC | 4 cut(s) | 32, 719, 827, 855 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 113, 147 |
| BciT130I | CCWGG | 8 cut(s) | 263, 1102, 1146, 1291, 1418, 1881, 1933, 1948 |
| BcnI | CCSGG | 4 cut(s) | 774, 1083, 1453, 1849 |
| BcoDI | GTCTC | 7 cut(s) | 649, 1202, 1371, 1515, 1767, 1857, 1912 |
| BfaI | CTAG | 9 cut(s) | 746, 762, 881, 1055, 1158, 1166, 1478, 1490, 1682 |
| BfoI | RGCGCY | 3 cut(s) | 457, 587, 761 |
| BfrI | CTTAAG | 1 cut(s) | 1457 |
| BfuAI | ACCTGC | 1 cut(s) | 649 |
| BmcAI | AGTACT | 2 cut(s) | 1172, 1726 |
| Bme18I | GGWCC | 3 cut(s) | 516, 1407, 1852 |
| BmeT110I | CYCGRG | 1 cut(s) | 1059 |
| BmgBI | CACGTC | 2 cut(s) | 254, 634 |
| BmrI | ACTGGG | 1 cut(s) | 37 |
| BmsI | GCATC | 3 cut(s) | 193, 1160, 1558 |
| BmtI | GCTAGC | 1 cut(s) | 1058 |
| BmuI | ACTGGG | 1 cut(s) | 37 |
| BpiI | GAAGAC | 2 cut(s) | 897, 1638 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 1892, 1924, 1909, 1941 |
| BpmI | CTGGAG | 7 cut(s) | 324, 505, 999, 1902, 1936, 1954, 1970 |
| Bpu10I | CCTNAGC | 3 cut(s) | 33, 1029, 1299 |
| BpuEI | CTTGAG | 2 cut(s) | 771, 1195 |
| BpuMI | CCSGG | 4 cut(s) | 774, 1083, 1453, 1849 |
| BsaBI | GATNNNNATC | 3 cut(s) | 417, 806, 1199 |
| BsaHI | GRCGYC | 1 cut(s) | 45 |
| BsaI | GGTCTC | 2 cut(s) | 649, 1912 |
| BsaWI | WCCGGW | 2 cut(s) | 238, 955 |
| Bse118I | RCCGGY | 2 cut(s) | 238, 513 |
| Bse1I | ACTGG | 8 cut(s) | 32, 352, 352, 507, 653, 1050, 1572, 1987 |
| Bse21I | CCTNAGG | 1 cut(s) | 720 |
| Bse8I | GATNNNNATC | 3 cut(s) | 417, 806, 1199 |
| BseBI | CCWGG | 8 cut(s) | 263, 1102, 1146, 1291, 1418, 1881, 1933, 1948 |
| BseGI | GGATG | 7 cut(s) | 124, 487, 739, 1111, 1134, 1151, 1928 |
| BseJI | GATNNNNATC | 3 cut(s) | 417, 806, 1199 |
| BseMII | CTCAG | 8 cut(s) | 51, 285, 711, 1020, 1115, 1197, 1203, 1313 |
| BseNI | ACTGG | 8 cut(s) | 32, 352, 352, 507, 653, 1050, 1572, 1987 |
| BseRI | GAGGAG | 2 cut(s) | 213, 1755 |
| BseX3I | CGGCCG | 2 cut(s) | 825, 840 |
| BseXI | GCAGC | 7 cut(s) | 154, 193, 424, 835, 994, 1546, 1549 |
| BsgI | GTGCAG | 2 cut(s) | 192, 677 |
| Bsh1236I | CGCG | 8 cut(s) | 282, 324, 380, 830, 1344, 1533, 1652, 1745 |
| Bsh1285I | CGRYCG | 5 cut(s) | 732, 828, 843, 1275, 1824 |
| BshTI | ACCGGT | 1 cut(s) | 238 |
| BsiEI | CGRYCG | 5 cut(s) | 732, 828, 843, 1275, 1824 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1165 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1059 |
| BslFI | GGGAC | 2 cut(s) | 70, 574 |
| BsmAI | GTCTC | 7 cut(s) | 649, 1202, 1371, 1515, 1767, 1857, 1912 |
| BsmBI | CGTCTC | 1 cut(s) | 1767 |
| BsmFI | GGGAC | 2 cut(s) | 70, 574 |
| BsmI | GAATGC | 2 cut(s) | 952, 1685 |
| Bso31I | GGTCTC | 2 cut(s) | 649, 1912 |
| BsoBI | CYCGRG | 1 cut(s) | 1059 |
| Bsp1286I | GDGCHC | 5 cut(s) | 250, 288, 1113, 1130, 1165 |
| Bsp143I | GATC | 9 cut(s) | 16, 212, 375, 496, 729, 900, 1018, 1386, 1756 |
| Bsp19I | CCATGG | 1 cut(s) | 470 |
| Bsp68I | TCGCGA | 3 cut(s) | 282, 1344, 1533 |
| BspCNI | CTCAG | 8 cut(s) | 52, 286, 712, 1021, 1116, 1198, 1204, 1312 |
| BspFNI | CGCG | 8 cut(s) | 282, 324, 380, 830, 1344, 1533, 1652, 1745 |
| BspMI | ACCTGC | 1 cut(s) | 649 |
| BspOI | GCTAGC | 1 cut(s) | 1058 |
| BspPI | GGATC | 5 cut(s) | 895, 1013, 1394, 1751, 1764 |
| BspQI | GCTCTTC | 1 cut(s) | 547 |
| BspTI | CTTAAG | 1 cut(s) | 1457 |
| BspTNI | GGTCTC | 2 cut(s) | 649, 1912 |
| BsrFI | RCCGGY | 2 cut(s) | 238, 513 |
| BsrI | ACTGG | 8 cut(s) | 32, 352, 352, 507, 653, 1050, 1572, 1987 |
| BssAI | RCCGGY | 2 cut(s) | 238, 513 |
| BssMI | GATC | 9 cut(s) | 16, 212, 375, 496, 729, 900, 1018, 1386, 1756 |
| BssNAI | GTATAC | 1 cut(s) | 70 |
| BssNI | GRCGYC | 1 cut(s) | 45 |
| BssSI | CACGAG | 1 cut(s) | 815 |
| BssT1I | CCWWGG | 2 cut(s) | 441, 470 |
| Bst1107I | GTATAC | 1 cut(s) | 70 |
| Bst2BI | CACGAG | 1 cut(s) | 815 |
| Bst2UI | CCWGG | 8 cut(s) | 263, 1102, 1146, 1291, 1418, 1881, 1933, 1948 |
| Bst4CI | ACNGT | 3 cut(s) | 373, 430, 1825 |
| Bst6I | CTCTTC | 2 cut(s) | 471, 547 |
| BstACI | GRCGYC | 1 cut(s) | 45 |
| BstAFI | CTTAAG | 1 cut(s) | 1457 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 332 |
| BstDSI | CCRYGG | 5 cut(s) | 48, 470, 588, 828, 1835 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 293 |
| BstF5I | GGATG | 7 cut(s) | 124, 487, 739, 1111, 1134, 1151, 1928 |
| BstFNI | CGCG | 8 cut(s) | 282, 324, 380, 830, 1344, 1533, 1652, 1745 |
| BstH2I | RGCGCY | 3 cut(s) | 457, 587, 761 |
| BstHHI | GCGC | 7 cut(s) | 326, 456, 586, 760, 1151, 1285, 1908 |
| BstKTI | GATC | 9 cut(s) | 19, 215, 378, 499, 732, 903, 1021, 1389, 1759 |
| BstMAI | GTCTC | 7 cut(s) | 649, 1202, 1371, 1515, 1767, 1857, 1912 |
| BstMBI | GATC | 9 cut(s) | 16, 212, 375, 496, 729, 900, 1018, 1386, 1756 |
| BstMCI | CGRYCG | 5 cut(s) | 732, 828, 843, 1275, 1824 |
| BstNI | CCWGG | 8 cut(s) | 263, 1102, 1146, 1291, 1418, 1881, 1933, 1948 |
| BstUI | CGCG | 8 cut(s) | 282, 324, 380, 830, 1344, 1533, 1652, 1745 |
| BstV1I | GCAGC | 7 cut(s) | 154, 193, 424, 835, 994, 1546, 1549 |
| BstV2I | GAAGAC | 2 cut(s) | 897, 1638 |
| BstX2I | RGATCY | 2 cut(s) | 1018, 1756 |
| BstYI | RGATCY | 2 cut(s) | 1018, 1756 |
| BstZ17I | GTATAC | 1 cut(s) | 70 |
| BstZI | CGGCCG | 2 cut(s) | 825, 840 |
| Bsu36I | CCTNAGG | 1 cut(s) | 720 |
| BtgI | CCRYGG | 5 cut(s) | 48, 470, 588, 828, 1835 |
| BtrI | CACGTC | 2 cut(s) | 254, 634 |
| BtsCI | GGATG | 7 cut(s) | 124, 487, 739, 1111, 1134, 1151, 1928 |
| BtsIMutI | CAGTG | 4 cut(s) | 345, 462, 660, 1203 |
| BtuMI | TCGCGA | 3 cut(s) | 282, 1344, 1533 |
| BveI | ACCTGC | 1 cut(s) | 649 |
| CaiI | CAGNNNCTG | 2 cut(s) | 347, 551 |
| CfoI | GCGC | 7 cut(s) | 326, 456, 586, 760, 1151, 1285, 1908 |
| Cfr10I | RCCGGY | 2 cut(s) | 238, 513 |
| Cfr42I | CCGCGG | 1 cut(s) | 831 |
| CseI | GACGC | 2 cut(s) | 53, 719 |
| Csp6I | GTAC | 6 cut(s) | 737, 797, 1064, 1171, 1725, 1990 |
| CspAI | ACCGGT | 1 cut(s) | 238 |
| CviAII | CATG | 6 cut(s) | 471, 895, 920, 989, 998, 1463 |
| CviQI | GTAC | 6 cut(s) | 737, 797, 1064, 1171, 1725, 1990 |
| DpnI | GATC | 9 cut(s) | 18, 214, 377, 498, 731, 902, 1020, 1388, 1758 |
| DpnII | GATC | 9 cut(s) | 16, 212, 375, 496, 729, 900, 1018, 1386, 1756 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 507 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 507 |
| EaeI | YGGCCR | 4 cut(s) | 135, 349, 825, 840 |
| EagI | CGGCCG | 2 cut(s) | 825, 840 |
| Eam1104I | CTCTTC | 2 cut(s) | 471, 547 |
| EarI | CTCTTC | 2 cut(s) | 471, 547 |
| Ecl136II | GAGCTC | 1 cut(s) | 1163 |
| EclXI | CGGCCG | 2 cut(s) | 825, 840 |
| Eco130I | CCWWGG | 2 cut(s) | 441, 470 |
| Eco24I | GRGCYC | 5 cut(s) | 250, 288, 1113, 1130, 1165 |
| Eco31I | GGTCTC | 2 cut(s) | 649, 1912 |
| Eco47I | GGWCC | 3 cut(s) | 516, 1407, 1852 |
| Eco52I | CGGCCG | 2 cut(s) | 825, 840 |
| Eco53kI | GAGCTC | 1 cut(s) | 1163 |
| Eco57I | CTGAAG | 5 cut(s) | 219, 408, 528, 873, 948 |
| Eco81I | CCTNAGG | 1 cut(s) | 720 |
| Eco88I | CYCGRG | 1 cut(s) | 1059 |
| EcoICRI | GAGCTC | 1 cut(s) | 1163 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 293 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1315 |
| EcoRII | CCWGG | 8 cut(s) | 261, 1100, 1144, 1289, 1416, 1879, 1931, 1946 |
| EcoT14I | CCWWGG | 2 cut(s) | 441, 470 |
| EcoT38I | GRGCYC | 5 cut(s) | 250, 288, 1113, 1130, 1165 |
| ErhI | CCWWGG | 2 cut(s) | 441, 470 |
| Esp3I | CGTCTC | 1 cut(s) | 1767 |
| FaeI | CATG | 6 cut(s) | 474, 898, 923, 992, 1001, 1466 |
| FaqI | GGGAC | 2 cut(s) | 70, 574 |
| FatI | CATG | 6 cut(s) | 470, 894, 919, 988, 997, 1462 |
| FauI | CCCGC | 2 cut(s) | 108, 925 |
| FblI | GTMKAC | 2 cut(s) | 69, 1841 |
| FokI | GGATG | 7 cut(s) | 131, 494, 726, 1118, 1121, 1138, 1915 |
| FriOI | GRGCYC | 5 cut(s) | 250, 288, 1113, 1130, 1165 |
| FspBI | CTAG | 9 cut(s) | 746, 762, 881, 1055, 1158, 1166, 1478, 1490, 1682 |
| FspI | TGCGCA | 1 cut(s) | 1284 |
| GlaI | GCGC | 7 cut(s) | 325, 455, 585, 759, 1150, 1284, 1907 |
| GsuI | CTGGAG | 7 cut(s) | 324, 505, 999, 1902, 1936, 1954, 1970 |
| HaeII | RGCGCY | 3 cut(s) | 457, 587, 761 |
| HgaI | GACGC | 2 cut(s) | 53, 719 |
| HhaI | GCGC | 7 cut(s) | 326, 456, 586, 760, 1151, 1285, 1908 |
| Hin1I | GRCGYC | 1 cut(s) | 45 |
| Hin1II | CATG | 6 cut(s) | 474, 898, 923, 992, 1001, 1466 |
| Hin6I | GCGC | 7 cut(s) | 324, 454, 584, 758, 1149, 1283, 1906 |
| HinP1I | GCGC | 7 cut(s) | 324, 454, 584, 758, 1149, 1283, 1906 |
| HinfI | GANTC | 5 cut(s) | 109, 398, 593, 1678, 1747 |
| HphI | GGTGA | 8 cut(s) | 253, 385, 566, 788, 955, 1210, 1456, 1936 |
| Hpy166II | GTNNAC | 4 cut(s) | 52, 70, 1218, 1842 |
| Hpy8I | GTNNAC | 4 cut(s) | 52, 70, 1218, 1842 |
| Hpy99I | CGWCG | 4 cut(s) | 47, 513, 635, 848 |
| HpyCH4III | ACNGT | 3 cut(s) | 373, 430, 1825 |
| HpyCH4IV | ACGT | 3 cut(s) | 253, 303, 633 |
| HpyCH4V | TGCA | 4 cut(s) | 209, 637, 658, 1600 |
| HpySE526I | ACGT | 3 cut(s) | 253, 303, 633 |
| Hsp92I | GRCGYC | 1 cut(s) | 45 |
| Hsp92II | CATG | 6 cut(s) | 474, 898, 923, 992, 1001, 1466 |
| HspAI | GCGC | 7 cut(s) | 324, 454, 584, 758, 1149, 1283, 1906 |
| KspI | CCGCGG | 1 cut(s) | 831 |
| Kzo9I | GATC | 9 cut(s) | 16, 212, 375, 496, 729, 900, 1018, 1386, 1756 |
| LguI | GCTCTTC | 1 cut(s) | 547 |
| LmnI | GCTCC | 8 cut(s) | 382, 869, 958, 982, 1116, 1552, 1783, 1989 |
| Lsp1109I | GCAGC | 7 cut(s) | 154, 193, 424, 835, 994, 1546, 1549 |
| LweI | GCATC | 3 cut(s) | 193, 1160, 1558 |
| MaeI | CTAG | 9 cut(s) | 746, 762, 881, 1055, 1158, 1166, 1478, 1490, 1682 |
| MaeII | ACGT | 3 cut(s) | 253, 303, 633 |
| MaeIII | GTNAC | 1 cut(s) | 1942 |
| MalI | GATC | 9 cut(s) | 18, 214, 377, 498, 731, 902, 1020, 1388, 1758 |
| MboI | GATC | 9 cut(s) | 16, 212, 375, 496, 729, 900, 1018, 1386, 1756 |
| MfeI | CAATTG | 3 cut(s) | 100, 638, 1433 |
| MflI | RGATCY | 2 cut(s) | 1018, 1756 |
| MhlI | GDGCHC | 5 cut(s) | 250, 288, 1113, 1130, 1165 |
| MlsI | TGGCCA | 1 cut(s) | 351 |
| MluI | ACGCGT | 1 cut(s) | 1650 |
| MluNI | TGGCCA | 1 cut(s) | 351 |
| MmeI | TCCRAC | 2 cut(s) | 1138, 1879 |
| Mox20I | TGGCCA | 1 cut(s) | 351 |
| MscI | TGGCCA | 1 cut(s) | 351 |
| MseI | TTAA | 2 cut(s) | 1260, 1458 |
| MslI | CAYNNNNRTG | 2 cut(s) | 179, 623 |
| Msp20I | TGGCCA | 1 cut(s) | 351 |
| MspA1I | CMGCKG | 4 cut(s) | 115, 437, 551, 830 |
| MspCI | CTTAAG | 1 cut(s) | 1457 |
| MunI | CAATTG | 3 cut(s) | 100, 638, 1433 |
| Mva1269I | GAATGC | 2 cut(s) | 952, 1685 |
| MvaI | CCWGG | 8 cut(s) | 263, 1102, 1146, 1291, 1418, 1881, 1933, 1948 |
| MvnI | CGCG | 8 cut(s) | 282, 324, 380, 830, 1344, 1533, 1652, 1745 |
| NciI | CCSGG | 4 cut(s) | 774, 1083, 1453, 1849 |
| NcoI | CCATGG | 1 cut(s) | 470 |
| NdeII | GATC | 9 cut(s) | 16, 212, 375, 496, 729, 900, 1018, 1386, 1756 |
| NheI | GCTAGC | 1 cut(s) | 1054 |
| NlaIII | CATG | 6 cut(s) | 474, 898, 923, 992, 1001, 1466 |
| NmuCI | GTSAC | 1 cut(s) | 1942 |
| NruI | TCGCGA | 3 cut(s) | 282, 1344, 1533 |
| NsbI | TGCGCA | 1 cut(s) | 1284 |
| OliI | CACNNNNGTG | 1 cut(s) | 623 |
| PciSI | GCTCTTC | 1 cut(s) | 547 |
| PcsI | WCGNNNNNNNCGW | 3 cut(s) | 279, 505, 630 |
| PctI | GAATGC | 2 cut(s) | 952, 1685 |
| PfeI | GAWTC | 5 cut(s) | 109, 398, 593, 1678, 1747 |
| PflFI | GACNNNGTC | 1 cut(s) | 881 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 314, 347 |
| PfoI | TCCNGGA | 3 cut(s) | 1081, 1416, 1931 |
| PinAI | ACCGGT | 1 cut(s) | 238 |
| Ple19I | CGATCG | 1 cut(s) | 732 |
| PshBI | ATTAAT | 1 cut(s) | 1260 |
| Psp124BI | GAGCTC | 1 cut(s) | 1165 |
| Psp6I | CCWGG | 8 cut(s) | 261, 1100, 1144, 1289, 1416, 1879, 1931, 1946 |
| PspGI | CCWGG | 8 cut(s) | 261, 1100, 1144, 1289, 1416, 1879, 1931, 1946 |
| PstNI | CAGNNNCTG | 2 cut(s) | 347, 551 |
| PsuI | RGATCY | 2 cut(s) | 1018, 1756 |
| PsyI | GACNNNGTC | 1 cut(s) | 881 |
| PvuI | CGATCG | 1 cut(s) | 732 |
| RruI | TCGCGA | 3 cut(s) | 282, 1344, 1533 |
| RsaI | GTAC | 6 cut(s) | 738, 798, 1065, 1172, 1726, 1991 |
| RsaNI | GTAC | 6 cut(s) | 737, 797, 1064, 1171, 1725, 1990 |
| RseI | CAYNNNNRTG | 2 cut(s) | 179, 623 |
| SacI | GAGCTC | 1 cut(s) | 1165 |
| SacII | CCGCGG | 1 cut(s) | 831 |
| SapI | GCTCTTC | 1 cut(s) | 547 |
| SaqAI | TTAA | 2 cut(s) | 1260, 1458 |
| Sau3AI | GATC | 9 cut(s) | 16, 212, 375, 496, 729, 900, 1018, 1386, 1756 |
| ScaI | AGTACT | 2 cut(s) | 1172, 1726 |
| SduI | GDGCHC | 5 cut(s) | 250, 288, 1113, 1130, 1165 |
| SfaNI | GCATC | 3 cut(s) | 193, 1160, 1558 |
| Sfr303I | CCGCGG | 1 cut(s) | 831 |
| SgrBI | CCGCGG | 1 cut(s) | 831 |
| SinI | GGWCC | 3 cut(s) | 516, 1407, 1852 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 179, 623 |
| SmlI | CTYRAG | 3 cut(s) | 786, 1174, 1457 |
| SmoI | CTYRAG | 3 cut(s) | 786, 1174, 1457 |
| SspMI | CTAG | 9 cut(s) | 746, 762, 881, 1055, 1158, 1166, 1478, 1490, 1682 |
| SstI | GAGCTC | 1 cut(s) | 1165 |
| StyI | CCWWGG | 2 cut(s) | 441, 470 |
| TaaI | ACNGT | 3 cut(s) | 373, 430, 1825 |
| TaiI | ACGT | 3 cut(s) | 256, 306, 636 |
| TaqI | TCGA | 4 cut(s) | 42, 177, 499, 1068 |
| TatI | WGTACW | 3 cut(s) | 1170, 1724, 1989 |
| TauI | GCSGC | 9 cut(s) | 137, 437, 551, 785, 830, 971, 1496, 1541, 1620 |
| TfiI | GAWTC | 5 cut(s) | 109, 398, 593, 1678, 1747 |
| Tru1I | TTAA | 2 cut(s) | 1260, 1458 |
| Tru9I | TTAA | 2 cut(s) | 1260, 1458 |
| TscAI | CASTG | 4 cut(s) | 352, 469, 660, 1210 |
| TseFI | GTSAC | 1 cut(s) | 1942 |
| TseI | GCWGC | 7 cut(s) | 167, 206, 437, 848, 1007, 1559, 1562 |
| Tsp45I | GTSAC | 1 cut(s) | 1942 |
| TspDTI | ATGAA | 3 cut(s) | 498, 1278, 1657 |
| TspGWI | ACGGA | 8 cut(s) | 85, 605, 875, 1175, 1270, 1565, 1749, 1824 |
| TspRI | CASTG | 4 cut(s) | 352, 469, 660, 1210 |
| Tth111I | GACNNNGTC | 1 cut(s) | 881 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 314, 347 |
| Vha464I | CTTAAG | 1 cut(s) | 1457 |
| VpaK11BI | GGWCC | 3 cut(s) | 516, 1407, 1852 |
| VspI | ATTAAT | 1 cut(s) | 1260 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 293 |
| XbaI | TCTAGA | 1 cut(s) | 1165 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 1579, 1929 |
| XmiI | GTMKAC | 2 cut(s) | 69, 1841 |
| XspI | CTAG | 9 cut(s) | 746, 762, 881, 1055, 1158, 1166, 1478, 1490, 1682 |
| ZrmI | AGTACT | 2 cut(s) | 1172, 1726 |