Plant mobile domain
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 2565 |
| Acc36I | ACCTGC | 3 cut(s) | 371, 2341, 2725 |
| Acc65I | GGTACC | 2 cut(s) | 1192, 1487 |
| AccB1I | GGYRCC | 4 cut(s) | 71, 269, 1192, 1487 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 1256, 2899 |
| AccBSI | CCGCTC | 1 cut(s) | 1657 |
| AccI | GTMKAC | 1 cut(s) | 1329 |
| AclI | AACGTT | 2 cut(s) | 879, 2457 |
| AclWI | GGATC | 9 cut(s) | 907, 920, 1046, 1757, 2154, 2285, 2705, 2826, 2834 |
| AcoI | YGGCCR | 4 cut(s) | 667, 793, 965, 1779 |
| AcsI | RAATTY | 3 cut(s) | 722, 1241, 2654 |
| AcuI | CTGAAG | 5 cut(s) | 1529, 1743, 1755, 1956, 2667 |
| AcyI | GRCGYC | 1 cut(s) | 1638 |
| AfeI | AGCGCT | 1 cut(s) | 628 |
| AgeI | ACCGGT | 2 cut(s) | 755, 817 |
| AgsI | TTSAA | 2 cut(s) | 583, 2858 |
| Alw21I | GWGCWC | 8 cut(s) | 88, 1029, 1146, 1601, 1684, 2605, 2676, 3054 |
| Alw26I | GTCTC | 6 cut(s) | 320, 338, 1375, 2236, 2768, 2976 |
| AlwI | GGATC | 9 cut(s) | 907, 920, 1046, 1757, 2154, 2285, 2705, 2826, 2834 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 2069 |
| Ama87I | CYCGRG | 2 cut(s) | 646, 2001 |
| Aor51HI | AGCGCT | 1 cut(s) | 628 |
| ApaI | GGGCCC | 4 cut(s) | 1263, 1312, 2024, 2217 |
| ApoI | RAATTY | 3 cut(s) | 722, 1241, 2654 |
| ArsI | GACNNNNNNTTYG | 8 cut(s) | 479, 511, 1231, 1263, 1391, 1423, 1561, 1593 |
| AsiGI | ACCGGT | 2 cut(s) | 755, 817 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 3000 |
| Asp718I | GGTACC | 2 cut(s) | 1192, 1487 |
| AspLEI | GCGC | 8 cut(s) | 629, 1073, 1094, 1288, 2008, 2221, 2360, 2591 |
| AsuC2I | CCSGG | 7 cut(s) | 151, 182, 249, 671, 1691, 2130, 2586 |
| AsuHPI | GGTGA | 3 cut(s) | 104, 379, 2321 |
| AsuII | TTCGAA | 1 cut(s) | 238 |
| AsuNHI | GCTAGC | 1 cut(s) | 3032 |
| AvaI | CYCGRG | 2 cut(s) | 646, 2001 |
| AvaII | GGWCC | 7 cut(s) | 63, 365, 765, 828, 1247, 1335, 2567 |
| AxyI | CCTNAGG | 2 cut(s) | 2142, 2340 |
| BaeGI | GKGCMC | 8 cut(s) | 74, 274, 355, 1263, 1312, 2024, 2135, 2217 |
| BamHI | GGATCC | 1 cut(s) | 912 |
| BanI | GGYRCC | 4 cut(s) | 71, 269, 1192, 1487 |
| BauI | CACGAG | 4 cut(s) | 354, 420, 1181, 1476 |
| BbsI | GAAGAC | 1 cut(s) | 200 |
| Bbv12I | GWGCWC | 8 cut(s) | 88, 1029, 1146, 1601, 1684, 2605, 2676, 3054 |
| BccI | CCATC | 8 cut(s) | 420, 542, 548, 557, 645, 2048, 2611, 2648 |
| BceAI | ACGGC | 3 cut(s) | 795, 808, 2970 |
| BciVI | GTATCC | 1 cut(s) | 1622 |
| BcnI | CCSGG | 7 cut(s) | 151, 182, 249, 671, 1691, 2130, 2586 |
| BcoDI | GTCTC | 6 cut(s) | 320, 338, 1375, 2236, 2768, 2976 |
| BfaI | CTAG | 5 cut(s) | 98, 362, 1980, 2196, 3033 |
| BfmI | CTRYAG | 4 cut(s) | 1326, 1728, 1785, 2552 |
| BfoI | RGCGCY | 3 cut(s) | 630, 2009, 2361 |
| BfuAI | ACCTGC | 3 cut(s) | 371, 2341, 2725 |
| BfuI | GTATCC | 1 cut(s) | 1622 |
| BglI | GCCNNNNNGGC | 3 cut(s) | 1176, 1471, 2342 |
| BglII | AGATCT | 1 cut(s) | 358 |
| BlpI | GCTNAGC | 3 cut(s) | 612, 2062, 2298 |
| BmcAI | AGTACT | 1 cut(s) | 1716 |
| Bme18I | GGWCC | 7 cut(s) | 63, 365, 765, 828, 1247, 1335, 2567 |
| BmeT110I | CYCGRG | 2 cut(s) | 646, 2001 |
| BmrI | ACTGGG | 2 cut(s) | 1315, 2989 |
| BmsI | GCATC | 9 cut(s) | 87, 178, 849, 871, 1201, 1713, 2186, 2428, 3019 |
| BmtI | GCTAGC | 1 cut(s) | 3036 |
| BmuI | ACTGGG | 2 cut(s) | 1315, 2989 |
| BpiI | GAAGAC | 1 cut(s) | 200 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 499, 531 |
| BpmI | CTGGAG | 3 cut(s) | 2331, 2849, 2939 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1600 |
| Bpu1102I | GCTNAGC | 3 cut(s) | 612, 2062, 2298 |
| Bpu14I | TTCGAA | 1 cut(s) | 238 |
| BpuEI | CTTGAG | 4 cut(s) | 725, 2193, 2589, 2970 |
| BpuMI | CCSGG | 7 cut(s) | 151, 182, 249, 671, 1691, 2130, 2586 |
| Bsa29I | ATCGAT | 3 cut(s) | 27, 552, 2700 |
| BsaHI | GRCGYC | 1 cut(s) | 1638 |
| BsaI | GGTCTC | 1 cut(s) | 1375 |
| BsaWI | WCCGGW | 4 cut(s) | 686, 755, 817, 1563 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 108, 138, 1666, 1696, 1865, 1895 |
| Bse118I | RCCGGY | 6 cut(s) | 219, 755, 817, 963, 1267, 2221 |
| Bse1I | ACTGG | 8 cut(s) | 230, 544, 1196, 1310, 1491, 2388, 2922, 2984 |
| Bse21I | CCTNAGG | 2 cut(s) | 2142, 2340 |
| Bse3DI | GCAATG | 2 cut(s) | 192, 2316 |
| BseCI | ATCGAT | 3 cut(s) | 27, 552, 2700 |
| BseGI | GGATG | 6 cut(s) | 190, 525, 862, 1110, 1572, 3052 |
| BseMI | GCAATG | 2 cut(s) | 192, 2316 |
| BseNI | ACTGG | 8 cut(s) | 230, 544, 1196, 1310, 1491, 2388, 2922, 2984 |
| BseRI | GAGGAG | 4 cut(s) | 298, 730, 1674, 2454 |
| BseSI | GKGCMC | 8 cut(s) | 74, 274, 355, 1263, 1312, 2024, 2135, 2217 |
| BseX3I | CGGCCG | 2 cut(s) | 793, 965 |
| BseYI | CCCAGC | 2 cut(s) | 160, 1958 |
| BsgI | GTGCAG | 3 cut(s) | 718, 2099, 2142 |
| Bsh1285I | CGRYCG | 7 cut(s) | 687, 796, 968, 1069, 1655, 2715, 2800 |
| BshNI | GGYRCC | 4 cut(s) | 71, 269, 1192, 1487 |
| BshTI | ACCGGT | 2 cut(s) | 755, 817 |
| BshVI | ATCGAT | 3 cut(s) | 27, 552, 2700 |
| BsiEI | CGRYCG | 7 cut(s) | 687, 796, 968, 1069, 1655, 2715, 2800 |
| BsiHKAI | GWGCWC | 8 cut(s) | 88, 1029, 1146, 1601, 1684, 2605, 2676, 3054 |
| BsiHKCI | CYCGRG | 2 cut(s) | 646, 2001 |
| BslFI | GGGAC | 7 cut(s) | 351, 814, 1184, 1479, 1518, 2249, 2558 |
| BsmAI | GTCTC | 6 cut(s) | 320, 338, 1375, 2236, 2768, 2976 |
| BsmBI | CGTCTC | 2 cut(s) | 338, 2236 |
| BsmFI | GGGAC | 7 cut(s) | 351, 814, 1184, 1479, 1518, 2249, 2558 |
| BsmI | GAATGC | 1 cut(s) | 379 |
| Bso31I | GGTCTC | 1 cut(s) | 1375 |
| BsoBI | CYCGRG | 2 cut(s) | 646, 2001 |
| Bsp119I | TTCGAA | 1 cut(s) | 238 |
| Bsp120I | GGGCCC | 4 cut(s) | 1259, 1308, 2020, 2213 |
| Bsp1407I | TGTACA | 2 cut(s) | 568, 2761 |
| Bsp1720I | GCTNAGC | 3 cut(s) | 612, 2062, 2298 |
| Bsp19I | CCATGG | 1 cut(s) | 606 |
| Bsp68I | TCGCGA | 2 cut(s) | 342, 2784 |
| BspDI | ATCGAT | 3 cut(s) | 27, 552, 2700 |
| BspMAI | CTGCAG | 2 cut(s) | 1732, 2556 |
| BspMI | ACCTGC | 3 cut(s) | 371, 2341, 2725 |
| BspOI | GCTAGC | 1 cut(s) | 3036 |
| BspPI | GGATC | 9 cut(s) | 907, 920, 1046, 1757, 2154, 2285, 2705, 2826, 2834 |
| BspQI | GCTCTTC | 2 cut(s) | 1975, 2922 |
| BspT104I | TTCGAA | 1 cut(s) | 238 |
| BspT107I | GGYRCC | 4 cut(s) | 71, 269, 1192, 1487 |
| BspTNI | GGTCTC | 1 cut(s) | 1375 |
| BsrBI | CCGCTC | 1 cut(s) | 1657 |
| BsrDI | GCAATG | 2 cut(s) | 192, 2316 |
| BsrFI | RCCGGY | 6 cut(s) | 219, 755, 817, 963, 1267, 2221 |
| BsrGI | TGTACA | 2 cut(s) | 568, 2761 |
| BsrI | ACTGG | 8 cut(s) | 230, 544, 1196, 1310, 1491, 2388, 2922, 2984 |
| BssAI | RCCGGY | 6 cut(s) | 219, 755, 817, 963, 1267, 2221 |
| BssNI | GRCGYC | 1 cut(s) | 1638 |
| BssSI | CACGAG | 4 cut(s) | 354, 420, 1181, 1476 |
| BssT1I | CCWWGG | 2 cut(s) | 606, 2886 |
| Bst2BI | CACGAG | 4 cut(s) | 354, 420, 1181, 1476 |
| Bst4CI | ACNGT | 3 cut(s) | 206, 1774, 2716 |
| Bst6I | CTCTTC | 4 cut(s) | 1412, 1582, 1975, 2922 |
| BstACI | GRCGYC | 1 cut(s) | 1638 |
| BstAUI | TGTACA | 2 cut(s) | 568, 2761 |
| BstBI | TTCGAA | 1 cut(s) | 238 |
| BstDSI | CCRYGG | 2 cut(s) | 606, 2016 |
| BstF5I | GGATG | 6 cut(s) | 190, 525, 862, 1110, 1572, 3052 |
| BstH2I | RGCGCY | 3 cut(s) | 630, 2009, 2361 |
| BstHHI | GCGC | 8 cut(s) | 629, 1073, 1094, 1288, 2008, 2221, 2360, 2591 |
| BstMAI | GTCTC | 6 cut(s) | 320, 338, 1375, 2236, 2768, 2976 |
| BstMCI | CGRYCG | 7 cut(s) | 687, 796, 968, 1069, 1655, 2715, 2800 |
| BstNSI | RCATGY | 4 cut(s) | 844, 985, 1282, 1958 |
| BstSFI | CTRYAG | 4 cut(s) | 1326, 1728, 1785, 2552 |
| BstSLI | GKGCMC | 8 cut(s) | 74, 274, 355, 1263, 1312, 2024, 2135, 2217 |
| BstV2I | GAAGAC | 1 cut(s) | 200 |
| BstX2I | RGATCY | 5 cut(s) | 358, 912, 2146, 2818, 2826 |
| BstYI | RGATCY | 5 cut(s) | 358, 912, 2146, 2818, 2826 |
| BstZI | CGGCCG | 2 cut(s) | 793, 965 |
| Bsu15I | ATCGAT | 3 cut(s) | 27, 552, 2700 |
| Bsu36I | CCTNAGG | 2 cut(s) | 2142, 2340 |
| BsuI | GTATCC | 1 cut(s) | 1622 |
| BsuTUI | ATCGAT | 3 cut(s) | 27, 552, 2700 |
| BtgI | CCRYGG | 2 cut(s) | 606, 2016 |
| BtgZI | GCGATG | 2 cut(s) | 2163, 2981 |
| BtsCI | GGATG | 6 cut(s) | 190, 525, 862, 1110, 1572, 3052 |
| BtsI | GCAGTG | 1 cut(s) | 2910 |
| BtsIMutI | CAGTG | 5 cut(s) | 537, 1719, 2049, 2643, 2910 |
| BtuMI | TCGCGA | 2 cut(s) | 342, 2784 |
| BveI | ACCTGC | 3 cut(s) | 371, 2341, 2725 |
| CaiI | CAGNNNCTG | 1 cut(s) | 2069 |
| CfoI | GCGC | 8 cut(s) | 629, 1073, 1094, 1288, 2008, 2221, 2360, 2591 |
| Cfr10I | RCCGGY | 6 cut(s) | 219, 755, 817, 963, 1267, 2221 |
| Cfr42I | CCGCGG | 1 cut(s) | 2019 |
| ClaI | ATCGAT | 3 cut(s) | 27, 552, 2700 |
| CseI | GACGC | 4 cut(s) | 355, 1331, 1646, 2800 |
| CspAI | ACCGGT | 2 cut(s) | 755, 817 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 2565 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 2565 |
| EaeI | YGGCCR | 4 cut(s) | 667, 793, 965, 1779 |
| EagI | CGGCCG | 2 cut(s) | 793, 965 |
| Eam1104I | CTCTTC | 4 cut(s) | 1412, 1582, 1975, 2922 |
| EarI | CTCTTC | 4 cut(s) | 1412, 1582, 1975, 2922 |
| EciI | GGCGGA | 2 cut(s) | 926, 1076 |
| Ecl136II | GAGCTC | 5 cut(s) | 1144, 1599, 1682, 2603, 2674 |
| EclXI | CGGCCG | 2 cut(s) | 793, 965 |
| Eco130I | CCWWGG | 2 cut(s) | 606, 2886 |
| Eco147I | AGGCCT | 1 cut(s) | 1648 |
| Eco31I | GGTCTC | 1 cut(s) | 1375 |
| Eco47I | GGWCC | 7 cut(s) | 63, 365, 765, 828, 1247, 1335, 2567 |
| Eco47III | AGCGCT | 1 cut(s) | 628 |
| Eco52I | CGGCCG | 2 cut(s) | 793, 965 |
| Eco53kI | GAGCTC | 5 cut(s) | 1144, 1599, 1682, 2603, 2674 |
| Eco57I | CTGAAG | 5 cut(s) | 1529, 1743, 1755, 1956, 2667 |
| Eco81I | CCTNAGG | 2 cut(s) | 2142, 2340 |
| Eco88I | CYCGRG | 2 cut(s) | 646, 2001 |
| EcoICRI | GAGCTC | 5 cut(s) | 1144, 1599, 1682, 2603, 2674 |
| EcoO109I | RGGNCCY | 7 cut(s) | 365, 828, 1260, 1944, 2021, 2213, 2567 |
| EcoRI | GAATTC | 1 cut(s) | 2654 |
| EcoT14I | CCWWGG | 2 cut(s) | 606, 2886 |
| EcoT22I | ATGCAT | 1 cut(s) | 864 |
| ErhI | CCWWGG | 2 cut(s) | 606, 2886 |
| Esp3I | CGTCTC | 2 cut(s) | 338, 2236 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1003, 1035 |
| FaqI | GGGAC | 7 cut(s) | 351, 814, 1184, 1479, 1518, 2249, 2558 |
| FauI | CCCGC | 9 cut(s) | 342, 968, 1175, 1470, 2011, 2023, 2224, 2311, 3067 |
| FblI | GTMKAC | 1 cut(s) | 1329 |
| FokI | GGATG | 6 cut(s) | 197, 512, 849, 1097, 1579, 3059 |
| FspBI | CTAG | 5 cut(s) | 98, 362, 1980, 2196, 3033 |
| GlaI | GCGC | 8 cut(s) | 628, 1072, 1093, 1287, 2007, 2220, 2359, 2590 |
| GsaI | CCCAGC | 2 cut(s) | 164, 1962 |
| GsuI | CTGGAG | 3 cut(s) | 2331, 2849, 2939 |
| HaeII | RGCGCY | 3 cut(s) | 630, 2009, 2361 |
| HgaI | GACGC | 4 cut(s) | 355, 1331, 1646, 2800 |
| HhaI | GCGC | 8 cut(s) | 629, 1073, 1094, 1288, 2008, 2221, 2360, 2591 |
| Hin1I | GRCGYC | 1 cut(s) | 1638 |
| Hin6I | GCGC | 8 cut(s) | 627, 1071, 1092, 1286, 2006, 2219, 2358, 2589 |
| HinP1I | GCGC | 8 cut(s) | 627, 1071, 1092, 1286, 2006, 2219, 2358, 2589 |
| HincII | GTYRAC | 2 cut(s) | 1378, 1548 |
| HindII | GTYRAC | 2 cut(s) | 1378, 1548 |
| HphI | GGTGA | 3 cut(s) | 104, 379, 2321 |
| Hpy166II | GTNNAC | 5 cut(s) | 1250, 1330, 1378, 1548, 2227 |
| Hpy8I | GTNNAC | 5 cut(s) | 1250, 1330, 1378, 1548, 2227 |
| Hpy99I | CGWCG | 3 cut(s) | 1763, 1941, 2405 |
| HpyCH4III | ACNGT | 3 cut(s) | 206, 1774, 2716 |
| HpyCH4IV | ACGT | 4 cut(s) | 879, 2229, 2262, 2457 |
| HpySE526I | ACGT | 4 cut(s) | 879, 2229, 2262, 2457 |
| Hsp92I | GRCGYC | 1 cut(s) | 1638 |
| HspAI | GCGC | 8 cut(s) | 627, 1071, 1092, 1286, 2006, 2219, 2358, 2589 |
| KflI | GGGWCCC | 1 cut(s) | 828 |
| KpnI | GGTACC | 2 cut(s) | 1196, 1491 |
| KroI | GCCGGC | 2 cut(s) | 219, 963 |
| KroNI | GCCGGC | 2 cut(s) | 221, 965 |
| KspI | CCGCGG | 1 cut(s) | 2019 |
| LguI | GCTCTTC | 2 cut(s) | 1975, 2922 |
| LmnI | GCTCC | 9 cut(s) | 10, 1032, 1156, 1662, 1687, 1873, 2350, 2521, 2920 |
| LweI | GCATC | 9 cut(s) | 87, 178, 849, 871, 1201, 1713, 2186, 2428, 3019 |
| MaeI | CTAG | 5 cut(s) | 98, 362, 1980, 2196, 3033 |
| MaeII | ACGT | 4 cut(s) | 879, 2229, 2262, 2457 |
| MaeIII | GTNAC | 4 cut(s) | 511, 2258, 2716, 2905 |
| MbiI | CCGCTC | 1 cut(s) | 1657 |
| MfeI | CAATTG | 3 cut(s) | 1187, 1482, 2894 |
| MflI | RGATCY | 5 cut(s) | 358, 912, 2146, 2818, 2826 |
| MlyI | GAGTC | 7 cut(s) | 238, 1381, 1551, 2535, 2553, 2780, 2842 |
| MmeI | TCCRAC | 4 cut(s) | 162, 501, 1054, 1089 |
| Mph1103I | ATGCAT | 1 cut(s) | 864 |
| MroNI | GCCGGC | 2 cut(s) | 219, 963 |
| MroXI | GAANNNNTTC | 1 cut(s) | 3000 |
| MseI | TTAA | 3 cut(s) | 44, 315, 998 |
| MspA1I | CMGCKG | 5 cut(s) | 1733, 1976, 2018, 2306, 2594 |
| MunI | CAATTG | 3 cut(s) | 1187, 1482, 2894 |
| Mva1269I | GAATGC | 1 cut(s) | 379 |
| NaeI | GCCGGC | 2 cut(s) | 221, 965 |
| NciI | CCSGG | 7 cut(s) | 151, 182, 249, 671, 1691, 2130, 2586 |
| NcoI | CCATGG | 1 cut(s) | 606 |
| NgoMIV | GCCGGC | 2 cut(s) | 219, 963 |
| NheI | GCTAGC | 1 cut(s) | 3032 |
| NmeAIII | GCCGAG | 1 cut(s) | 1150 |
| NmuCI | GTSAC | 2 cut(s) | 2716, 2905 |
| NruI | TCGCGA | 2 cut(s) | 342, 2784 |
| NsiI | ATGCAT | 1 cut(s) | 864 |
| NspI | RCATGY | 4 cut(s) | 844, 985, 1282, 1958 |
| NspV | TTCGAA | 1 cut(s) | 238 |
| PaeI | GCATGC | 2 cut(s) | 844, 1282 |
| PaeR7I | CTCGAG | 1 cut(s) | 2001 |
| PasI | CCCWGGG | 1 cut(s) | 1827 |
| PceI | AGGCCT | 1 cut(s) | 1648 |
| PciSI | GCTCTTC | 2 cut(s) | 1975, 2922 |
| PcsI | WCGNNNNNNNCGW | 4 cut(s) | 876, 1290, 1299, 2235 |
| PctI | GAATGC | 1 cut(s) | 379 |
| PdiI | GCCGGC | 2 cut(s) | 221, 965 |
| PdmI | GAANNNNTTC | 1 cut(s) | 3000 |
| PfeI | GAWTC | 6 cut(s) | 693, 1435, 1605, 1739, 2323, 2806 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 1256, 2899 |
| PfoI | TCCNGGA | 2 cut(s) | 180, 247 |
| PinAI | ACCGGT | 2 cut(s) | 755, 817 |
| Ple19I | CGATCG | 1 cut(s) | 2800 |
| PleI | GAGTC | 7 cut(s) | 238, 1381, 1551, 2534, 2553, 2780, 2842 |
| PpsI | GAGTC | 7 cut(s) | 238, 1381, 1551, 2534, 2553, 2780, 2842 |
| PpuMI | RGGWCCY | 3 cut(s) | 365, 828, 2567 |
| Psp124BI | GAGCTC | 5 cut(s) | 1146, 1601, 1684, 2605, 2676 |
| Psp1406I | AACGTT | 2 cut(s) | 879, 2457 |
| Psp5II | RGGWCCY | 3 cut(s) | 365, 828, 2567 |
| PspFI | CCCAGC | 2 cut(s) | 160, 1958 |
| PspOMI | GGGCCC | 4 cut(s) | 1259, 1308, 2020, 2213 |
| PspPPI | RGGWCCY | 3 cut(s) | 365, 828, 2567 |
| PstI | CTGCAG | 2 cut(s) | 1732, 2556 |
| PstNI | CAGNNNCTG | 1 cut(s) | 2069 |
| PsuI | RGATCY | 5 cut(s) | 358, 912, 2146, 2818, 2826 |
| PvuI | CGATCG | 1 cut(s) | 2800 |
| PvuII | CAGCTG | 3 cut(s) | 1733, 1976, 2594 |
| RruI | TCGCGA | 2 cut(s) | 342, 2784 |
| SacI | GAGCTC | 5 cut(s) | 1146, 1601, 1684, 2605, 2676 |
| SacII | CCGCGG | 1 cut(s) | 2019 |
| SapI | GCTCTTC | 2 cut(s) | 1975, 2922 |
| SaqAI | TTAA | 3 cut(s) | 44, 315, 998 |
| ScaI | AGTACT | 1 cut(s) | 1716 |
| SchI | GAGTC | 7 cut(s) | 238, 1381, 1551, 2535, 2553, 2780, 2842 |
| SfaNI | GCATC | 9 cut(s) | 87, 178, 849, 871, 1201, 1713, 2186, 2428, 3019 |
| SfcI | CTRYAG | 4 cut(s) | 1326, 1728, 1785, 2552 |
| Sfr274I | CTCGAG | 1 cut(s) | 2001 |
| Sfr303I | CCGCGG | 1 cut(s) | 2019 |
| SfuI | TTCGAA | 1 cut(s) | 238 |
| SgrBI | CCGCGG | 1 cut(s) | 2019 |
| SinI | GGWCC | 7 cut(s) | 63, 365, 765, 828, 1247, 1335, 2567 |
| SlaI | CTCGAG | 1 cut(s) | 2001 |
| SmlI | CTYRAG | 5 cut(s) | 704, 2001, 2208, 2604, 2985 |
| SmoI | CTYRAG | 5 cut(s) | 704, 2001, 2208, 2604, 2985 |
| SphI | GCATGC | 2 cut(s) | 844, 1282 |
| SseBI | AGGCCT | 1 cut(s) | 1648 |
| SspMI | CTAG | 5 cut(s) | 98, 362, 1980, 2196, 3033 |
| SstI | GAGCTC | 5 cut(s) | 1146, 1601, 1684, 2605, 2676 |
| StuI | AGGCCT | 1 cut(s) | 1648 |
| StyI | CCWWGG | 2 cut(s) | 606, 2886 |
| TaaI | ACNGT | 3 cut(s) | 206, 1774, 2716 |
| TaiI | ACGT | 4 cut(s) | 882, 2232, 2265, 2460 |
| TaqII | GACCGA | 3 cut(s) | 1235, 1352, 1869 |
| TatI | WGTACW | 3 cut(s) | 568, 1714, 2761 |
| TauI | GCSGC | 6 cut(s) | 798, 1092, 1124, 1784, 2393, 2757 |
| TfiI | GAWTC | 6 cut(s) | 693, 1435, 1605, 1739, 2323, 2806 |
| Tru1I | TTAA | 3 cut(s) | 44, 315, 998 |
| Tru9I | TTAA | 3 cut(s) | 44, 315, 998 |
| TscAI | CASTG | 5 cut(s) | 544, 1726, 2056, 2650, 2910 |
| TseFI | GTSAC | 2 cut(s) | 2716, 2905 |
| Tsp45I | GTSAC | 2 cut(s) | 2716, 2905 |
| TspDTI | ATGAA | 7 cut(s) | 630, 715, 917, 1854, 2118, 2550, 2718 |
| TspGWI | ACGGA | 5 cut(s) | 1428, 1598, 2123, 2710, 2839 |
| TspRI | CASTG | 5 cut(s) | 544, 1726, 2056, 2650, 2910 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 1256, 2899 |
| VpaK11BI | GGWCC | 7 cut(s) | 63, 365, 765, 828, 1247, 1335, 2567 |
| XapI | RAATTY | 3 cut(s) | 722, 1241, 2654 |
| XbaI | TCTAGA | 1 cut(s) | 97 |
| XceI | RCATGY | 4 cut(s) | 844, 985, 1282, 1958 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 419, 2893 |
| XhoI | CTCGAG | 1 cut(s) | 2001 |
| XmiI | GTMKAC | 1 cut(s) | 1329 |
| XmnI | GAANNNNTTC | 1 cut(s) | 3000 |
| XspI | CTAG | 5 cut(s) | 98, 362, 1980, 2196, 3033 |
| ZrmI | AGTACT | 1 cut(s) | 1716 |
| Zsp2I | ATGCAT | 1 cut(s) | 864 |