Plant mobile domain
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 801 |
| Acc36I | ACCTGC | 1 cut(s) | 1361 |
| AccB1I | GGYRCC | 2 cut(s) | 254, 323 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 833 |
| AccI | GTMKAC | 1 cut(s) | 906 |
| AccII | CGCG | 6 cut(s) | 495, 648, 669, 863, 1099, 1165 |
| AccIII | TCCGGA | 3 cut(s) | 380, 690, 1549 |
| AclWI | GGATC | 7 cut(s) | 403, 416, 623, 1457, 1508, 1521, 1560 |
| AcoI | YGGCCR | 4 cut(s) | 289, 462, 1171, 1197 |
| AcsI | RAATTY | 1 cut(s) | 218 |
| AcuI | CTGAAG | 3 cut(s) | 1074, 1176, 1257 |
| AcyI | GRCGYC | 1 cut(s) | 1500 |
| AfaI | GTAC | 4 cut(s) | 344, 506, 545, 785 |
| AfeI | AGCGCT | 2 cut(s) | 124, 1539 |
| AfiI | CCNNNNNNNGG | 9 cut(s) | 50, 320, 833, 921, 1117, 1151, 1169, 1333, 1510 |
| AflIII | ACRYGT | 1 cut(s) | 540 |
| AgeI | ACCGGT | 1 cut(s) | 313 |
| AgsI | TTSAA | 3 cut(s) | 203, 1403, 1577 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 314 |
| AjnI | CCWGG | 8 cut(s) | 257, 654, 791, 809, 1116, 1168, 1327, 1561 |
| AluBI | AGCT | 6 cut(s) | 714, 721, 1006, 1103, 1241, 1247 |
| AluI | AGCT | 6 cut(s) | 714, 721, 1006, 1103, 1241, 1247 |
| Alw21I | GWGCWC | 4 cut(s) | 723, 1008, 1041, 1105 |
| Alw26I | GTCTC | 3 cut(s) | 952, 1466, 1551 |
| AlwI | GGATC | 7 cut(s) | 403, 416, 623, 1457, 1508, 1521, 1560 |
| Aor13HI | TCCGGA | 3 cut(s) | 380, 690, 1549 |
| Aor51HI | AGCGCT | 2 cut(s) | 124, 1539 |
| ApaI | GGGCCC | 2 cut(s) | 840, 889 |
| ApeKI | GCWGC | 2 cut(s) | 120, 698 |
| ApoI | RAATTY | 1 cut(s) | 218 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 808, 840, 968, 1000 |
| AsiGI | ACCGGT | 1 cut(s) | 313 |
| AspLEI | GCGC | 7 cut(s) | 125, 650, 671, 865, 1162, 1167, 1540 |
| AsuC2I | CCSGG | 2 cut(s) | 167, 1112 |
| AsuHPI | GGTGA | 2 cut(s) | 65, 1577 |
| AvaII | GGWCC | 4 cut(s) | 261, 383, 824, 912 |
| AxyI | CCTNAGG | 1 cut(s) | 1509 |
| BaeGI | GKGCMC | 2 cut(s) | 840, 889 |
| BamHI | GGATCC | 2 cut(s) | 408, 1513 |
| BanI | GGYRCC | 2 cut(s) | 254, 323 |
| BanII | GRGCYC | 6 cut(s) | 306, 723, 840, 889, 1008, 1105 |
| Bbv12I | GWGCWC | 4 cut(s) | 723, 1008, 1041, 1105 |
| BbvCI | CCTCAGC | 1 cut(s) | 1248 |
| BbvI | GCAGC | 2 cut(s) | 132, 685 |
| BccI | CCATC | 6 cut(s) | 44, 53, 141, 335, 477, 680 |
| BceAI | ACGGC | 2 cut(s) | 291, 304 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 471, 505 |
| BciT130I | CCWGG | 8 cut(s) | 259, 656, 793, 811, 1118, 1170, 1329, 1563 |
| BcnI | CCSGG | 2 cut(s) | 167, 1112 |
| BcoDI | GTCTC | 3 cut(s) | 952, 1466, 1551 |
| BfmI | CTRYAG | 3 cut(s) | 160, 903, 1242 |
| BfoI | RGCGCY | 2 cut(s) | 126, 1541 |
| BfuAI | ACCTGC | 1 cut(s) | 1361 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 753 |
| BmcAI | AGTACT | 1 cut(s) | 506 |
| Bme18I | GGWCC | 4 cut(s) | 261, 383, 824, 912 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 314 |
| BmrI | ACTGGG | 1 cut(s) | 1221 |
| BmsI | GCATC | 6 cut(s) | 345, 367, 778, 889, 1048, 1134 |
| BmuI | ACTGGG | 1 cut(s) | 1221 |
| BplI | GAGNNNNNCTC | 1 cut(s) | 27 |
| BpmI | CTGGAG | 1 cut(s) | 1131 |
| Bpu10I | CCTNAGC | 2 cut(s) | 1007, 1248 |
| BpuEI | CTTGAG | 1 cut(s) | 1397 |
| BpuMI | CCSGG | 2 cut(s) | 167, 1112 |
| Bsa29I | ATCGAT | 1 cut(s) | 48 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1557 |
| BsaHI | GRCGYC | 1 cut(s) | 1500 |
| BsaJI | CCNNGG | 6 cut(s) | 102, 702, 1116, 1168, 1327, 1328 |
| BsaWI | WCCGGW | 6 cut(s) | 182, 313, 380, 690, 1516, 1549 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1087, 1117 |
| Bsc4I | CCNNNNNNNGG | 9 cut(s) | 50, 320, 833, 921, 1117, 1151, 1169, 1333, 1510 |
| Bse118I | RCCGGY | 5 cut(s) | 313, 460, 844, 1121, 1355 |
| Bse1I | ACTGG | 5 cut(s) | 40, 256, 773, 1185, 1216 |
| Bse21I | CCTNAGG | 1 cut(s) | 1509 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1557 |
| BseAI | TCCGGA | 3 cut(s) | 380, 690, 1549 |
| BseBI | CCWGG | 8 cut(s) | 259, 656, 793, 811, 1118, 1170, 1329, 1563 |
| BseCI | ATCGAT | 1 cut(s) | 48 |
| BseDI | CCNNGG | 6 cut(s) | 102, 702, 1116, 1168, 1327, 1328 |
| BseGI | GGATG | 3 cut(s) | 21, 358, 687 |
| BseJI | GATNNNNATC | 1 cut(s) | 1557 |
| BseLI | CCNNNNNNNGG | 9 cut(s) | 50, 320, 833, 921, 1117, 1151, 1169, 1333, 1510 |
| BseMII | CTCAG | 7 cut(s) | 516, 696, 724, 1021, 1239, 1322, 1500 |
| BseNI | ACTGG | 5 cut(s) | 40, 256, 773, 1185, 1216 |
| BseRI | GAGGAG | 2 cut(s) | 226, 1095 |
| BseSI | GKGCMC | 2 cut(s) | 840, 889 |
| BseX3I | CGGCCG | 3 cut(s) | 289, 462, 1197 |
| BseXI | GCAGC | 2 cut(s) | 132, 685 |
| BseYI | CCCAGC | 2 cut(s) | 108, 1387 |
| Bsh1236I | CGCG | 6 cut(s) | 495, 648, 669, 863, 1099, 1165 |
| Bsh1285I | CGRYCG | 6 cut(s) | 183, 292, 465, 646, 1200, 1521 |
| BshNI | GGYRCC | 2 cut(s) | 254, 323 |
| BshTI | ACCGGT | 1 cut(s) | 313 |
| BshVI | ATCGAT | 1 cut(s) | 48 |
| BsiEI | CGRYCG | 6 cut(s) | 183, 292, 465, 646, 1200, 1521 |
| BsiHKAI | GWGCWC | 4 cut(s) | 723, 1008, 1041, 1105 |
| BslFI | GGGAC | 2 cut(s) | 761, 925 |
| BslI | CCNNNNNNNGG | 9 cut(s) | 50, 320, 833, 921, 1117, 1151, 1169, 1333, 1510 |
| BsmAI | GTCTC | 3 cut(s) | 952, 1466, 1551 |
| BsmBI | CGTCTC | 2 cut(s) | 1466, 1551 |
| BsmFI | GGGAC | 2 cut(s) | 761, 925 |
| BsmI | GAATGC | 1 cut(s) | 1489 |
| Bsp120I | GGGCCC | 2 cut(s) | 836, 885 |
| Bsp1286I | GDGCHC | 7 cut(s) | 306, 723, 840, 889, 1008, 1041, 1105 |
| Bsp13I | TCCGGA | 3 cut(s) | 380, 690, 1549 |
| Bsp143I | GATC | 8 cut(s) | 369, 408, 466, 628, 871, 1449, 1513, 1552 |
| Bsp19I | CCATGG | 1 cut(s) | 102 |
| BspCNI | CTCAG | 7 cut(s) | 517, 695, 723, 1020, 1240, 1321, 1501 |
| BspDI | ATCGAT | 1 cut(s) | 48 |
| BspEI | TCCGGA | 3 cut(s) | 380, 690, 1549 |
| BspFNI | CGCG | 6 cut(s) | 495, 648, 669, 863, 1099, 1165 |
| BspMI | ACCTGC | 1 cut(s) | 1361 |
| BspPI | GGATC | 7 cut(s) | 403, 416, 623, 1457, 1508, 1521, 1560 |
| BspQI | GCTCTTC | 1 cut(s) | 1404 |
| BspT107I | GGYRCC | 2 cut(s) | 254, 323 |
| BsrFI | RCCGGY | 5 cut(s) | 313, 460, 844, 1121, 1355 |
| BsrI | ACTGG | 5 cut(s) | 40, 256, 773, 1185, 1216 |
| BssAI | RCCGGY | 5 cut(s) | 313, 460, 844, 1121, 1355 |
| BssECI | CCNNGG | 6 cut(s) | 102, 702, 1116, 1168, 1327, 1328 |
| BssMI | GATC | 8 cut(s) | 369, 408, 466, 628, 871, 1449, 1513, 1552 |
| BssNI | GRCGYC | 1 cut(s) | 1500 |
| BssT1I | CCWWGG | 1 cut(s) | 102 |
| Bst2UI | CCWGG | 8 cut(s) | 259, 656, 793, 811, 1118, 1170, 1329, 1563 |
| Bst4CI | ACNGT | 2 cut(s) | 569, 959 |
| Bst6I | CTCTTC | 2 cut(s) | 989, 1404 |
| BstACI | GRCGYC | 1 cut(s) | 1500 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1232 |
| BstDEI | CTNAG | 8 cut(s) | 268, 525, 682, 710, 1007, 1248, 1308, 1509 |
| BstDSI | CCRYGG | 1 cut(s) | 102 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1149 |
| BstF5I | GGATG | 3 cut(s) | 21, 358, 687 |
| BstFNI | CGCG | 6 cut(s) | 495, 648, 669, 863, 1099, 1165 |
| BstH2I | RGCGCY | 2 cut(s) | 126, 1541 |
| BstHHI | GCGC | 7 cut(s) | 125, 650, 671, 865, 1162, 1167, 1540 |
| BstKTI | GATC | 8 cut(s) | 372, 411, 469, 631, 874, 1452, 1516, 1555 |
| BstMAI | GTCTC | 3 cut(s) | 952, 1466, 1551 |
| BstMBI | GATC | 8 cut(s) | 369, 408, 466, 628, 871, 1449, 1513, 1552 |
| BstMCI | CGRYCG | 6 cut(s) | 183, 292, 465, 646, 1200, 1521 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 656, 753, 1173, 1196, 1232 |
| BstNI | CCWGG | 8 cut(s) | 259, 656, 793, 811, 1118, 1170, 1329, 1563 |
| BstNSI | RCATGY | 3 cut(s) | 340, 544, 562 |
| BstSFI | CTRYAG | 3 cut(s) | 160, 903, 1242 |
| BstSLI | GKGCMC | 2 cut(s) | 840, 889 |
| BstUI | CGCG | 6 cut(s) | 495, 648, 669, 863, 1099, 1165 |
| BstV1I | GCAGC | 2 cut(s) | 132, 685 |
| BstX2I | RGATCY | 2 cut(s) | 408, 1513 |
| BstYI | RGATCY | 2 cut(s) | 408, 1513 |
| BstZI | CGGCCG | 3 cut(s) | 289, 462, 1197 |
| Bsu15I | ATCGAT | 1 cut(s) | 48 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1509 |
| BsuTUI | ATCGAT | 1 cut(s) | 48 |
| BtgI | CCRYGG | 1 cut(s) | 102 |
| BtsCI | GGATG | 3 cut(s) | 21, 358, 687 |
| BtsIMutI | CAGTG | 3 cut(s) | 33, 249, 1192 |
| BveI | ACCTGC | 1 cut(s) | 1361 |
| CciNI | GCGGCCGC | 1 cut(s) | 1197 |
| CfoI | GCGC | 7 cut(s) | 125, 650, 671, 865, 1162, 1167, 1540 |
| Cfr10I | RCCGGY | 5 cut(s) | 313, 460, 844, 1121, 1355 |
| ClaI | ATCGAT | 1 cut(s) | 48 |
| CseI | GACGC | 2 cut(s) | 1508, 1533 |
| Csp6I | GTAC | 4 cut(s) | 343, 505, 544, 784 |
| CspAI | ACCGGT | 1 cut(s) | 313 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1427, 1462 |
| CviAII | CATG | 6 cut(s) | 68, 103, 337, 437, 541, 559 |
| CviQI | GTAC | 4 cut(s) | 343, 505, 544, 784 |
| DdeI | CTNAG | 8 cut(s) | 268, 525, 682, 710, 1007, 1248, 1308, 1509 |
| DpnI | GATC | 8 cut(s) | 371, 410, 468, 630, 873, 1451, 1515, 1554 |
| DpnII | GATC | 8 cut(s) | 369, 408, 466, 628, 871, 1449, 1513, 1552 |
| DriI | GACNNNNNGTC | 1 cut(s) | 314 |
| EaeI | YGGCCR | 4 cut(s) | 289, 462, 1171, 1197 |
| EagI | CGGCCG | 3 cut(s) | 289, 462, 1197 |
| Eam1104I | CTCTTC | 2 cut(s) | 989, 1404 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 314 |
| EarI | CTCTTC | 2 cut(s) | 989, 1404 |
| EciI | GGCGGA | 1 cut(s) | 653 |
| Ecl136II | GAGCTC | 3 cut(s) | 721, 1006, 1103 |
| EclXI | CGGCCG | 3 cut(s) | 289, 462, 1197 |
| Eco130I | CCWWGG | 1 cut(s) | 102 |
| Eco24I | GRGCYC | 6 cut(s) | 306, 723, 840, 889, 1008, 1105 |
| Eco32I | GATATC | 1 cut(s) | 445 |
| Eco47I | GGWCC | 4 cut(s) | 261, 383, 824, 912 |
| Eco47III | AGCGCT | 2 cut(s) | 124, 1539 |
| Eco52I | CGGCCG | 3 cut(s) | 289, 462, 1197 |
| Eco53kI | GAGCTC | 3 cut(s) | 721, 1006, 1103 |
| Eco57I | CTGAAG | 3 cut(s) | 1074, 1176, 1257 |
| Eco81I | CCTNAGG | 1 cut(s) | 1509 |
| EcoICRI | GAGCTC | 3 cut(s) | 721, 1006, 1103 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1149 |
| EcoO109I | RGGNCCY | 1 cut(s) | 837 |
| EcoRII | CCWGG | 8 cut(s) | 257, 654, 791, 809, 1116, 1168, 1327, 1561 |
| EcoRV | GATATC | 1 cut(s) | 445 |
| EcoT14I | CCWWGG | 1 cut(s) | 102 |
| EcoT22I | ATGCAT | 1 cut(s) | 360 |
| EcoT38I | GRGCYC | 6 cut(s) | 306, 723, 840, 889, 1008, 1105 |
| ErhI | CCWWGG | 1 cut(s) | 102 |
| Esp3I | CGTCTC | 2 cut(s) | 1466, 1551 |
| FaeI | CATG | 6 cut(s) | 71, 106, 340, 440, 544, 562 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 580, 612 |
| FaqI | GGGAC | 2 cut(s) | 761, 925 |
| FatI | CATG | 6 cut(s) | 67, 102, 336, 436, 540, 558 |
| FauI | CCCGC | 3 cut(s) | 465, 1030, 1300 |
| FauNDI | CATATG | 2 cut(s) | 61, 1383 |
| FblI | GTMKAC | 1 cut(s) | 906 |
| FokI | GGATG | 3 cut(s) | 8, 345, 674 |
| FriOI | GRGCYC | 6 cut(s) | 306, 723, 840, 889, 1008, 1105 |
| GlaI | GCGC | 7 cut(s) | 124, 649, 670, 864, 1161, 1166, 1539 |
| GsaI | CCCAGC | 2 cut(s) | 112, 1391 |
| GsuI | CTGGAG | 1 cut(s) | 1131 |
| HaeII | RGCGCY | 2 cut(s) | 126, 1541 |
| HgaI | GACGC | 2 cut(s) | 1508, 1533 |
| HhaI | GCGC | 7 cut(s) | 125, 650, 671, 865, 1162, 1167, 1540 |
| Hin1I | GRCGYC | 1 cut(s) | 1500 |
| Hin1II | CATG | 6 cut(s) | 71, 106, 340, 440, 544, 562 |
| Hin6I | GCGC | 7 cut(s) | 123, 648, 669, 863, 1160, 1165, 1538 |
| HinP1I | GCGC | 7 cut(s) | 123, 648, 669, 863, 1160, 1165, 1538 |
| HincII | GTYRAC | 1 cut(s) | 955 |
| HindII | GTYRAC | 1 cut(s) | 955 |
| HinfI | GANTC | 7 cut(s) | 80, 189, 577, 591, 819, 964, 1253 |
| HphI | GGTGA | 2 cut(s) | 65, 1577 |
| Hpy166II | GTNNAC | 5 cut(s) | 56, 827, 907, 955, 1139 |
| Hpy188I | TCNGA | 8 cut(s) | 308, 526, 685, 1054, 1091, 1270, 1311, 1468 |
| Hpy8I | GTNNAC | 5 cut(s) | 56, 827, 907, 955, 1139 |
| Hpy99I | CGWCG | 2 cut(s) | 355, 1370 |
| HpyCH4III | ACNGT | 2 cut(s) | 569, 959 |
| HpyCH4IV | ACGT | 1 cut(s) | 1299 |
| HpyCH4V | TGCA | 4 cut(s) | 67, 231, 243, 358 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 656, 753, 1173, 1196, 1232 |
| HpyF3I | CTNAG | 8 cut(s) | 268, 525, 682, 710, 1007, 1248, 1308, 1509 |
| HpySE526I | ACGT | 1 cut(s) | 1299 |
| Hsp92I | GRCGYC | 1 cut(s) | 1500 |
| Hsp92II | CATG | 6 cut(s) | 71, 106, 340, 440, 544, 562 |
| HspAI | GCGC | 7 cut(s) | 123, 648, 669, 863, 1160, 1165, 1538 |
| Kpn2I | TCCGGA | 3 cut(s) | 380, 690, 1549 |
| KroI | GCCGGC | 2 cut(s) | 460, 1121 |
| KroNI | GCCGGC | 2 cut(s) | 462, 1123 |
| Kzo9I | GATC | 8 cut(s) | 369, 408, 466, 628, 871, 1449, 1513, 1552 |
| LguI | GCTCTTC | 1 cut(s) | 1404 |
| LmnI | GCTCC | 3 cut(s) | 733, 1108, 1492 |
| Lsp1109I | GCAGC | 2 cut(s) | 132, 685 |
| LweI | GCATC | 6 cut(s) | 345, 367, 778, 889, 1048, 1134 |
| MaeII | ACGT | 1 cut(s) | 1299 |
| MalI | GATC | 8 cut(s) | 371, 410, 468, 630, 873, 1451, 1515, 1554 |
| MboI | GATC | 8 cut(s) | 369, 408, 466, 628, 871, 1449, 1513, 1552 |
| MfeI | CAATTG | 2 cut(s) | 470, 764 |
| MflI | RGATCY | 2 cut(s) | 408, 1513 |
| MhlI | GDGCHC | 7 cut(s) | 306, 723, 840, 889, 1008, 1041, 1105 |
| MluCI | AATT | 7 cut(s) | 74, 218, 470, 749, 764, 796, 1131 |
| MlyI | GAGTC | 2 cut(s) | 74, 958 |
| MmeI | TCCRAC | 1 cut(s) | 941 |
| Mph1103I | ATGCAT | 1 cut(s) | 360 |
| MroI | TCCGGA | 3 cut(s) | 380, 690, 1549 |
| MroNI | GCCGGC | 2 cut(s) | 460, 1121 |
| MspA1I | CMGCKG | 4 cut(s) | 1025, 1196, 1202, 1247 |
| MteI | GCGCNGCGC | 1 cut(s) | 1163 |
| MunI | CAATTG | 2 cut(s) | 470, 764 |
| Mva1269I | GAATGC | 1 cut(s) | 1489 |
| MvaI | CCWGG | 8 cut(s) | 259, 656, 793, 811, 1118, 1170, 1329, 1563 |
| MvnI | CGCG | 6 cut(s) | 495, 648, 669, 863, 1099, 1165 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 656, 753, 1173, 1196, 1232 |
| NaeI | GCCGGC | 2 cut(s) | 462, 1123 |
| NciI | CCSGG | 2 cut(s) | 167, 1112 |
| NcoI | CCATGG | 1 cut(s) | 102 |
| NdeI | CATATG | 2 cut(s) | 61, 1383 |
| NdeII | GATC | 8 cut(s) | 369, 408, 466, 628, 871, 1449, 1513, 1552 |
| NgoMIV | GCCGGC | 2 cut(s) | 460, 1121 |
| NlaIII | CATG | 6 cut(s) | 71, 106, 340, 440, 544, 562 |
| NmeAIII | GCCGAG | 1 cut(s) | 727 |
| NotI | GCGGCCGC | 1 cut(s) | 1197 |
| NsiI | ATGCAT | 1 cut(s) | 360 |
| NspI | RCATGY | 3 cut(s) | 340, 544, 562 |
| PaeI | GCATGC | 1 cut(s) | 340 |
| PasI | CCCWGGG | 1 cut(s) | 1328 |
| PciI | ACATGT | 1 cut(s) | 540 |
| PciSI | GCTCTTC | 1 cut(s) | 1404 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 867, 876 |
| PctI | GAATGC | 1 cut(s) | 1489 |
| PdiI | GCCGGC | 2 cut(s) | 462, 1123 |
| PfeI | GAWTC | 5 cut(s) | 189, 577, 591, 819, 1253 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 833 |
| PinAI | ACCGGT | 1 cut(s) | 313 |
| PleI | GAGTC | 2 cut(s) | 74, 958 |
| PpsI | GAGTC | 2 cut(s) | 74, 958 |
| PscI | ACATGT | 1 cut(s) | 540 |
| PsiI | TTATAA | 1 cut(s) | 801 |
| Psp124BI | GAGCTC | 3 cut(s) | 723, 1008, 1105 |
| Psp6I | CCWGG | 8 cut(s) | 257, 654, 791, 809, 1116, 1168, 1327, 1561 |
| PspFI | CCCAGC | 2 cut(s) | 108, 1387 |
| PspGI | CCWGG | 8 cut(s) | 257, 654, 791, 809, 1116, 1168, 1327, 1561 |
| PspOMI | GGGCCC | 2 cut(s) | 836, 885 |
| PsuI | RGATCY | 2 cut(s) | 408, 1513 |
| PvuII | CAGCTG | 1 cut(s) | 1247 |
| RsaI | GTAC | 4 cut(s) | 344, 506, 545, 785 |
| RsaNI | GTAC | 4 cut(s) | 343, 505, 544, 784 |
| SacI | GAGCTC | 3 cut(s) | 723, 1008, 1105 |
| SapI | GCTCTTC | 1 cut(s) | 1404 |
| Sau3AI | GATC | 8 cut(s) | 369, 408, 466, 628, 871, 1449, 1513, 1552 |
| ScaI | AGTACT | 1 cut(s) | 506 |
| SchI | GAGTC | 2 cut(s) | 74, 958 |
| SduI | GDGCHC | 7 cut(s) | 306, 723, 840, 889, 1008, 1041, 1105 |
| SfaNI | GCATC | 6 cut(s) | 345, 367, 778, 889, 1048, 1134 |
| SfcI | CTRYAG | 3 cut(s) | 160, 903, 1242 |
| SinI | GGWCC | 4 cut(s) | 261, 383, 824, 912 |
| SmlI | CTYRAG | 1 cut(s) | 1412 |
| SmoI | CTYRAG | 1 cut(s) | 1412 |
| SphI | GCATGC | 1 cut(s) | 340 |
| Sse9I | AATT | 7 cut(s) | 74, 218, 470, 749, 764, 796, 1131 |
| SspI | AATATT | 1 cut(s) | 206 |
| SstI | GAGCTC | 3 cut(s) | 723, 1008, 1105 |
| StyI | CCWWGG | 1 cut(s) | 102 |
| TaaI | ACNGT | 2 cut(s) | 569, 959 |
| TaiI | ACGT | 1 cut(s) | 1302 |
| TaqI | TCGA | 5 cut(s) | 48, 366, 481, 870, 1072 |
| TaqII | GACCGA | 2 cut(s) | 812, 929 |
| TasI | AATT | 7 cut(s) | 74, 218, 470, 749, 764, 796, 1131 |
| TatI | WGTACW | 1 cut(s) | 504 |
| TauI | GCSGC | 8 cut(s) | 294, 495, 669, 1165, 1176, 1179, 1199, 1202 |
| TfiI | GAWTC | 5 cut(s) | 189, 577, 591, 819, 1253 |
| TscAI | CASTG | 3 cut(s) | 40, 256, 1192 |
| TseI | GCWGC | 2 cut(s) | 120, 698 |
| TspDTI | ATGAA | 4 cut(s) | 126, 211, 453, 1355 |
| TspGWI | ACGGA | 1 cut(s) | 1490 |
| TspRI | CASTG | 3 cut(s) | 40, 256, 1192 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 833 |
| VpaK11BI | GGWCC | 4 cut(s) | 261, 383, 824, 912 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1149 |
| XapI | RAATTY | 1 cut(s) | 218 |
| XceI | RCATGY | 3 cut(s) | 340, 544, 562 |
| XmiI | GTMKAC | 1 cut(s) | 906 |
| ZrmI | AGTACT | 1 cut(s) | 506 |
| Zsp2I | ATGCAT | 1 cut(s) | 360 |