Cytosolic purine
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 138 |
| Acc36I | ACCTGC | 2 cut(s) | 1056, 1101 |
| AccB1I | GGYRCC | 1 cut(s) | 523 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 159 |
| AccBSI | CCGCTC | 1 cut(s) | 369 |
| AccI | GTMKAC | 2 cut(s) | 983, 1089 |
| AccII | CGCG | 5 cut(s) | 62, 187, 237, 994, 1011 |
| AccIII | TCCGGA | 1 cut(s) | 190 |
| AclWI | GGATC | 3 cut(s) | 1028, 1115, 1128 |
| AcoI | YGGCCR | 2 cut(s) | 477, 890 |
| AcsI | RAATTY | 1 cut(s) | 715 |
| AcuI | CTGAAG | 1 cut(s) | 410 |
| AcyI | GRCGYC | 2 cut(s) | 135, 452 |
| AfaI | GTAC | 1 cut(s) | 818 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 159, 231, 409, 436, 505, 780, 881 |
| AflIII | ACRYGT | 4 cut(s) | 48, 585, 953, 992 |
| AgsI | TTSAA | 2 cut(s) | 932, 1151 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 769 |
| AjiI | CACGTC | 2 cut(s) | 49, 954 |
| AjnI | CCWGG | 2 cut(s) | 158, 230 |
| AluBI | AGCT | 2 cut(s) | 424, 745 |
| AluI | AGCT | 2 cut(s) | 424, 745 |
| Alw21I | GWGCWC | 2 cut(s) | 486, 663 |
| Alw44I | GTGCAC | 1 cut(s) | 482 |
| AlwI | GGATC | 3 cut(s) | 1028, 1115, 1128 |
| Aor13HI | TCCGGA | 1 cut(s) | 190 |
| AoxI | GGCC | 7 cut(s) | 213, 477, 489, 556, 641, 842, 890 |
| ApaLI | GTGCAC | 1 cut(s) | 482 |
| ApeKI | GCWGC | 6 cut(s) | 218, 263, 374, 424, 699, 968 |
| ApoI | RAATTY | 1 cut(s) | 715 |
| AspLEI | GCGC | 6 cut(s) | 62, 237, 429, 624, 693, 739 |
| AspS9I | GGNCC | 3 cut(s) | 641, 786, 842 |
| AsuC2I | CCSGG | 3 cut(s) | 40, 329, 411 |
| AsuHPI | GGTGA | 3 cut(s) | 430, 520, 1127 |
| AsuNHI | GCTAGC | 1 cut(s) | 5 |
| AvaII | GGWCC | 1 cut(s) | 786 |
| BaeGI | GKGCMC | 2 cut(s) | 486, 528 |
| BamHI | GGATCC | 1 cut(s) | 1120 |
| BanI | GGYRCC | 1 cut(s) | 523 |
| BauI | CACGAG | 1 cut(s) | 485 |
| Bbv12I | GWGCWC | 2 cut(s) | 486, 663 |
| BbvI | GCAGC | 6 cut(s) | 205, 250, 361, 411, 686, 980 |
| BccI | CCATC | 2 cut(s) | 62, 161 |
| BceAI | ACGGC | 4 cut(s) | 326, 453, 464, 829 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 200, 234 |
| BciT130I | CCWGG | 2 cut(s) | 160, 232 |
| BcnI | CCSGG | 3 cut(s) | 40, 329, 411 |
| BfaI | CTAG | 3 cut(s) | 6, 131, 825 |
| BfmI | CTRYAG | 2 cut(s) | 105, 146 |
| BfoI | RGCGCY | 3 cut(s) | 625, 694, 740 |
| BfuAI | ACCTGC | 2 cut(s) | 1056, 1101 |
| BlpI | GCTNAGC | 1 cut(s) | 56 |
| Bme1390I | CCNGG | 5 cut(s) | 40, 160, 232, 329, 411 |
| Bme18I | GGWCC | 1 cut(s) | 786 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 769 |
| BmgBI | CACGTC | 2 cut(s) | 49, 954 |
| BmgT120I | GGNCC | 3 cut(s) | 641, 786, 842 |
| BmiI | GGNNCC | 8 cut(s) | 112, 274, 323, 525, 642, 787, 1040, 1122 |
| BmrFI | CCNGG | 5 cut(s) | 40, 160, 232, 329, 411 |
| BmrI | ACTGGG | 1 cut(s) | 477 |
| BmtI | GCTAGC | 1 cut(s) | 9 |
| BmuI | ACTGGG | 1 cut(s) | 477 |
| BoxI | GACNNNNGTC | 1 cut(s) | 243 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 56 |
| BpuMI | CCSGG | 3 cut(s) | 40, 329, 411 |
| BsaHI | GRCGYC | 2 cut(s) | 135, 452 |
| BsaJI | CCNNGG | 7 cut(s) | 158, 159, 410, 502, 648, 694, 703 |
| BsaWI | WCCGGW | 2 cut(s) | 190, 402 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 159, 231, 409, 436, 505, 780, 881 |
| Bse118I | RCCGGY | 2 cut(s) | 726, 892 |
| Bse1I | ACTGG | 3 cut(s) | 472, 1075, 1168 |
| BseAI | TCCGGA | 1 cut(s) | 190 |
| BseBI | CCWGG | 2 cut(s) | 160, 232 |
| BseDI | CCNNGG | 7 cut(s) | 158, 159, 410, 502, 648, 694, 703 |
| BseGI | GGATG | 3 cut(s) | 73, 153, 369 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 159, 231, 409, 436, 505, 780, 881 |
| BseMII | CTCAG | 3 cut(s) | 70, 749, 855 |
| BseNI | ACTGG | 3 cut(s) | 472, 1075, 1168 |
| BseSI | GKGCMC | 2 cut(s) | 486, 528 |
| BseX3I | CGGCCG | 1 cut(s) | 477 |
| BseXI | GCAGC | 6 cut(s) | 205, 250, 361, 411, 686, 980 |
| BseYI | CCCAGC | 1 cut(s) | 278 |
| BsgI | GTGCAG | 1 cut(s) | 987 |
| Bsh1236I | CGCG | 5 cut(s) | 62, 187, 237, 994, 1011 |
| Bsh1285I | CGRYCG | 1 cut(s) | 480 |
| BshFI | GGCC | 7 cut(s) | 215, 479, 491, 558, 643, 844, 892 |
| BshNI | GGYRCC | 1 cut(s) | 523 |
| BsiEI | CGRYCG | 1 cut(s) | 480 |
| BsiHKAI | GWGCWC | 2 cut(s) | 486, 663 |
| BsiSI | CCGG | 7 cut(s) | 39, 191, 329, 403, 410, 727, 893 |
| BslFI | GGGAC | 4 cut(s) | 349, 776, 799, 987 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 159, 231, 409, 436, 505, 780, 881 |
| BsmFI | GGGAC | 4 cut(s) | 349, 776, 799, 987 |
| BsnI | GGCC | 7 cut(s) | 215, 479, 491, 558, 643, 844, 892 |
| Bsp1286I | GDGCHC | 3 cut(s) | 486, 528, 663 |
| Bsp13I | TCCGGA | 1 cut(s) | 190 |
| Bsp143I | GATC | 3 cut(s) | 747, 1020, 1120 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 56 |
| BspANI | GGCC | 7 cut(s) | 215, 479, 491, 558, 643, 844, 892 |
| BspCNI | CTCAG | 3 cut(s) | 69, 750, 856 |
| BspEI | TCCGGA | 1 cut(s) | 190 |
| BspFNI | CGCG | 5 cut(s) | 62, 187, 237, 994, 1011 |
| BspLI | GGNNCC | 8 cut(s) | 112, 274, 323, 525, 642, 787, 1040, 1122 |
| BspMAI | CTGCAG | 1 cut(s) | 109 |
| BspMI | ACCTGC | 2 cut(s) | 1056, 1101 |
| BspOI | GCTAGC | 1 cut(s) | 9 |
| BspPI | GGATC | 3 cut(s) | 1028, 1115, 1128 |
| BspT107I | GGYRCC | 1 cut(s) | 523 |
| BsrBI | CCGCTC | 1 cut(s) | 369 |
| BsrFI | RCCGGY | 2 cut(s) | 726, 892 |
| BsrI | ACTGG | 3 cut(s) | 472, 1075, 1168 |
| BssAI | RCCGGY | 2 cut(s) | 726, 892 |
| BssECI | CCNNGG | 7 cut(s) | 158, 159, 410, 502, 648, 694, 703 |
| BssMI | GATC | 3 cut(s) | 747, 1020, 1120 |
| BssNAI | GTATAC | 1 cut(s) | 984 |
| BssNI | GRCGYC | 2 cut(s) | 135, 452 |
| BssSI | CACGAG | 1 cut(s) | 485 |
| BssT1I | CCWWGG | 2 cut(s) | 502, 694 |
| Bst1107I | GTATAC | 1 cut(s) | 984 |
| Bst2BI | CACGAG | 1 cut(s) | 485 |
| Bst2UI | CCWGG | 2 cut(s) | 160, 232 |
| Bst4CI | ACNGT | 3 cut(s) | 260, 649, 809 |
| Bst6I | CTCTTC | 1 cut(s) | 996 |
| BstACI | GRCGYC | 2 cut(s) | 135, 452 |
| BstC8I | GCNNGC | 8 cut(s) | 7, 208, 268, 396, 728, 918, 1034, 1064 |
| BstDEI | CTNAG | 4 cut(s) | 56, 201, 758, 864 |
| BstDSI | CCRYGG | 2 cut(s) | 648, 703 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 879 |
| BstF5I | GGATG | 3 cut(s) | 73, 153, 369 |
| BstFNI | CGCG | 5 cut(s) | 62, 187, 237, 994, 1011 |
| BstH2I | RGCGCY | 3 cut(s) | 625, 694, 740 |
| BstHHI | GCGC | 6 cut(s) | 62, 237, 429, 624, 693, 739 |
| BstKTI | GATC | 3 cut(s) | 750, 1023, 1123 |
| BstMBI | GATC | 3 cut(s) | 747, 1020, 1120 |
| BstMCI | CGRYCG | 1 cut(s) | 480 |
| BstMWI | GCNNNNNNNGC | 9 cut(s) | 127, 212, 221, 227, 241, 380, 555, 699, 736 |
| BstNI | CCWGG | 2 cut(s) | 160, 232 |
| BstNSI | RCATGY | 2 cut(s) | 589, 928 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 243 |
| BstSCI | CCNGG | 5 cut(s) | 38, 158, 230, 327, 409 |
| BstSFI | CTRYAG | 2 cut(s) | 105, 146 |
| BstSLI | GKGCMC | 2 cut(s) | 486, 528 |
| BstUI | CGCG | 5 cut(s) | 62, 187, 237, 994, 1011 |
| BstV1I | GCAGC | 6 cut(s) | 205, 250, 361, 411, 686, 980 |
| BstX2I | RGATCY | 1 cut(s) | 1120 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 588 |
| BstYI | RGATCY | 1 cut(s) | 1120 |
| BstZ17I | GTATAC | 1 cut(s) | 984 |
| BstZI | CGGCCG | 1 cut(s) | 477 |
| BsuRI | GGCC | 7 cut(s) | 215, 479, 491, 558, 643, 844, 892 |
| BtgI | CCRYGG | 2 cut(s) | 648, 703 |
| BtgZI | GCGATG | 1 cut(s) | 620 |
| BtrI | CACGTC | 2 cut(s) | 49, 954 |
| BtsCI | GGATG | 3 cut(s) | 73, 153, 369 |
| BtsI | GCAGTG | 2 cut(s) | 34, 116 |
| BtsIMutI | CAGTG | 3 cut(s) | 34, 116, 265 |
| BveI | ACCTGC | 2 cut(s) | 1056, 1101 |
| Cac8I | GCNNGC | 8 cut(s) | 7, 208, 268, 396, 728, 918, 1034, 1064 |
| CfoI | GCGC | 6 cut(s) | 62, 237, 429, 624, 693, 739 |
| Cfr10I | RCCGGY | 2 cut(s) | 726, 892 |
| Cfr13I | GGNCC | 3 cut(s) | 641, 786, 842 |
| CseI | GACGC | 6 cut(s) | 80, 176, 233, 441, 784, 1000 |
| Csp6I | GTAC | 1 cut(s) | 817 |
| CviAII | CATG | 3 cut(s) | 586, 769, 925 |
| CviQI | GTAC | 1 cut(s) | 817 |
| DdeI | CTNAG | 4 cut(s) | 56, 201, 758, 864 |
| DpnI | GATC | 3 cut(s) | 749, 1022, 1122 |
| DpnII | GATC | 3 cut(s) | 747, 1020, 1120 |
| DraI | TTTAAA | 1 cut(s) | 1144 |
| DriI | GACNNNNNGTC | 1 cut(s) | 769 |
| EaeI | YGGCCR | 2 cut(s) | 477, 890 |
| EagI | CGGCCG | 1 cut(s) | 477 |
| Eam1104I | CTCTTC | 1 cut(s) | 996 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 769 |
| EarI | CTCTTC | 1 cut(s) | 996 |
| EciI | GGCGGA | 5 cut(s) | 80, 488, 668, 1049, 1051 |
| EclXI | CGGCCG | 1 cut(s) | 477 |
| Eco130I | CCWWGG | 2 cut(s) | 502, 694 |
| Eco47I | GGWCC | 1 cut(s) | 786 |
| Eco52I | CGGCCG | 1 cut(s) | 477 |
| Eco57I | CTGAAG | 1 cut(s) | 410 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 879 |
| EcoO109I | RGGNCCY | 2 cut(s) | 641, 786 |
| EcoRII | CCWGG | 2 cut(s) | 158, 230 |
| EcoT14I | CCWWGG | 2 cut(s) | 502, 694 |
| ErhI | CCWWGG | 2 cut(s) | 502, 694 |
| FaeI | CATG | 3 cut(s) | 589, 772, 928 |
| FaiI | YATR | 9 cut(s) | 14, 173, 494, 587, 682, 684, 770, 926, 984 |
| FaqI | GGGAC | 4 cut(s) | 349, 776, 799, 987 |
| FatI | CATG | 3 cut(s) | 585, 768, 924 |
| FauI | CCCGC | 4 cut(s) | 199, 346, 774, 964 |
| FblI | GTMKAC | 2 cut(s) | 983, 1089 |
| FokI | GGATG | 3 cut(s) | 80, 140, 376 |
| FspBI | CTAG | 3 cut(s) | 6, 131, 825 |
| GlaI | GCGC | 6 cut(s) | 61, 236, 428, 623, 692, 738 |
| GsaI | CCCAGC | 1 cut(s) | 282 |
| HaeII | RGCGCY | 3 cut(s) | 625, 694, 740 |
| HaeIII | GGCC | 7 cut(s) | 215, 479, 491, 558, 643, 844, 892 |
| HapII | CCGG | 7 cut(s) | 39, 191, 329, 403, 410, 727, 893 |
| HgaI | GACGC | 6 cut(s) | 80, 176, 233, 441, 784, 1000 |
| HhaI | GCGC | 6 cut(s) | 62, 237, 429, 624, 693, 739 |
| Hin1I | GRCGYC | 2 cut(s) | 135, 452 |
| Hin1II | CATG | 3 cut(s) | 589, 772, 928 |
| Hin6I | GCGC | 6 cut(s) | 60, 235, 427, 622, 691, 737 |
| HinP1I | GCGC | 6 cut(s) | 60, 235, 427, 622, 691, 737 |
| HincII | GTYRAC | 2 cut(s) | 346, 1090 |
| HindII | GTYRAC | 2 cut(s) | 346, 1090 |
| HinfI | GANTC | 7 cut(s) | 35, 83, 311, 457, 721, 754, 764 |
| HpaII | CCGG | 7 cut(s) | 39, 191, 329, 403, 410, 727, 893 |
| HphI | GGTGA | 3 cut(s) | 430, 520, 1127 |
| Hpy166II | GTNNAC | 4 cut(s) | 346, 484, 984, 1090 |
| Hpy188I | TCNGA | 6 cut(s) | 46, 573, 759, 865, 1025, 1161 |
| Hpy188III | TCNNGA | 3 cut(s) | 191, 463, 751 |
| Hpy8I | GTNNAC | 4 cut(s) | 346, 484, 984, 1090 |
| Hpy99I | CGWCG | 6 cut(s) | 140, 242, 439, 457, 800, 955 |
| HpyAV | CCTTC | 3 cut(s) | 442, 574, 833 |
| HpyCH4III | ACNGT | 3 cut(s) | 260, 649, 809 |
| HpyCH4IV | ACGT | 3 cut(s) | 48, 135, 953 |
| HpyCH4V | TGCA | 3 cut(s) | 107, 484, 968 |
| HpyF10VI | GCNNNNNNNGC | 9 cut(s) | 127, 212, 221, 227, 241, 380, 555, 699, 736 |
| HpyF3I | CTNAG | 4 cut(s) | 56, 201, 758, 864 |
| HpySE526I | ACGT | 3 cut(s) | 48, 135, 953 |
| Hsp92I | GRCGYC | 2 cut(s) | 135, 452 |
| Hsp92II | CATG | 3 cut(s) | 589, 772, 928 |
| HspAI | GCGC | 6 cut(s) | 60, 235, 427, 622, 691, 737 |
| Kpn2I | TCCGGA | 1 cut(s) | 190 |
| KroI | GCCGGC | 1 cut(s) | 726 |
| KroNI | GCCGGC | 1 cut(s) | 728 |
| Kzo9I | GATC | 3 cut(s) | 747, 1020, 1120 |
| LmnI | GCTCC | 5 cut(s) | 278, 298, 666, 734, 1112 |
| Lsp1109I | GCAGC | 6 cut(s) | 205, 250, 361, 411, 686, 980 |
| MaeI | CTAG | 3 cut(s) | 6, 131, 825 |
| MaeII | ACGT | 3 cut(s) | 48, 135, 953 |
| MaeIII | GTNAC | 2 cut(s) | 254, 508 |
| MalI | GATC | 3 cut(s) | 749, 1022, 1122 |
| MbiI | CCGCTC | 1 cut(s) | 369 |
| MboI | GATC | 3 cut(s) | 747, 1020, 1120 |
| MboII | GAAGA | 3 cut(s) | 848, 1010, 1013 |
| MflI | RGATCY | 1 cut(s) | 1120 |
| MhlI | GDGCHC | 3 cut(s) | 486, 528, 663 |
| MluCI | AATT | 3 cut(s) | 715, 1146, 1151 |
| MluI | ACGCGT | 1 cut(s) | 992 |
| MlyI | GAGTC | 3 cut(s) | 320, 730, 758 |
| MmeI | TCCRAC | 1 cut(s) | 895 |
| MroI | TCCGGA | 1 cut(s) | 190 |
| MroNI | GCCGGC | 1 cut(s) | 726 |
| MseI | TTAA | 2 cut(s) | 858, 1143 |
| MspA1I | CMGCKG | 7 cut(s) | 218, 270, 278, 296, 520, 902, 971 |
| MspI | CCGG | 7 cut(s) | 39, 191, 329, 403, 410, 727, 893 |
| MspR9I | CCNGG | 5 cut(s) | 40, 160, 232, 329, 411 |
| MvaI | CCWGG | 2 cut(s) | 160, 232 |
| MvnI | CGCG | 5 cut(s) | 62, 187, 237, 994, 1011 |
| MwoI | GCNNNNNNNGC | 9 cut(s) | 127, 212, 221, 227, 241, 380, 555, 699, 736 |
| NaeI | GCCGGC | 1 cut(s) | 728 |
| NciI | CCSGG | 3 cut(s) | 40, 329, 411 |
| NdeII | GATC | 3 cut(s) | 747, 1020, 1120 |
| NgoMIV | GCCGGC | 1 cut(s) | 726 |
| NheI | GCTAGC | 1 cut(s) | 5 |
| NlaIII | CATG | 3 cut(s) | 589, 772, 928 |
| NlaIV | GGNNCC | 8 cut(s) | 112, 274, 323, 525, 642, 787, 1040, 1122 |
| NmuCI | GTSAC | 1 cut(s) | 508 |
| NspI | RCATGY | 2 cut(s) | 589, 928 |
| PasI | CCCWGGG | 1 cut(s) | 159 |
| PciI | ACATGT | 1 cut(s) | 585 |
| PcsI | WCGNNNNNNNCGW | 4 cut(s) | 92, 184, 339, 461 |
| PdiI | GCCGGC | 1 cut(s) | 728 |
| PfeI | GAWTC | 4 cut(s) | 35, 83, 457, 754 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 159 |
| PfoI | TCCNGGA | 1 cut(s) | 327 |
| PleI | GAGTC | 3 cut(s) | 319, 729, 758 |
| PpsI | GAGTC | 3 cut(s) | 319, 729, 758 |
| PpuMI | RGGWCCY | 1 cut(s) | 786 |
| PscI | ACATGT | 1 cut(s) | 585 |
| PshAI | GACNNNNGTC | 1 cut(s) | 243 |
| Psp5II | RGGWCCY | 1 cut(s) | 786 |
| Psp6I | CCWGG | 2 cut(s) | 158, 230 |
| PspFI | CCCAGC | 1 cut(s) | 278 |
| PspGI | CCWGG | 2 cut(s) | 158, 230 |
| PspN4I | GGNNCC | 8 cut(s) | 112, 274, 323, 525, 642, 787, 1040, 1122 |
| PspPI | GGNCC | 3 cut(s) | 641, 786, 842 |
| PspPPI | RGGWCCY | 1 cut(s) | 786 |
| PstI | CTGCAG | 1 cut(s) | 109 |
| PsuI | RGATCY | 1 cut(s) | 1120 |
| RsaI | GTAC | 1 cut(s) | 818 |
| RsaNI | GTAC | 1 cut(s) | 817 |
| SalI | GTCGAC | 1 cut(s) | 1088 |
| SaqAI | TTAA | 2 cut(s) | 858, 1143 |
| Sau3AI | GATC | 3 cut(s) | 747, 1020, 1120 |
| Sau96I | GGNCC | 3 cut(s) | 641, 786, 842 |
| SbfI | CCTGCAGG | 1 cut(s) | 109 |
| SchI | GAGTC | 3 cut(s) | 320, 730, 758 |
| ScrFI | CCNGG | 5 cut(s) | 40, 160, 232, 329, 411 |
| SdaI | CCTGCAGG | 1 cut(s) | 109 |
| SduI | GDGCHC | 3 cut(s) | 486, 528, 663 |
| SfcI | CTRYAG | 2 cut(s) | 105, 146 |
| SinI | GGWCC | 1 cut(s) | 786 |
| Sse8387I | CCTGCAGG | 1 cut(s) | 109 |
| Sse9I | AATT | 3 cut(s) | 715, 1146, 1151 |
| SspMI | CTAG | 3 cut(s) | 6, 131, 825 |
| StyD4I | CCNGG | 5 cut(s) | 38, 158, 230, 327, 409 |
| StyI | CCWWGG | 2 cut(s) | 502, 694 |
| TaaI | ACNGT | 3 cut(s) | 260, 649, 809 |
| TaiI | ACGT | 3 cut(s) | 51, 138, 956 |
| TaqI | TCGA | 7 cut(s) | 23, 138, 385, 455, 750, 880, 1089 |
| TaqII | GACCGA | 1 cut(s) | 557 |
| TasI | AATT | 3 cut(s) | 715, 1146, 1151 |
| TauI | GCSGC | 7 cut(s) | 65, 145, 218, 224, 273, 479, 1011 |
| TfiI | GAWTC | 4 cut(s) | 35, 83, 457, 754 |
| Tru1I | TTAA | 2 cut(s) | 858, 1143 |
| Tru9I | TTAA | 2 cut(s) | 858, 1143 |
| TscAI | CASTG | 3 cut(s) | 34, 123, 265 |
| TseFI | GTSAC | 1 cut(s) | 508 |
| TseI | GCWGC | 6 cut(s) | 218, 263, 374, 424, 699, 968 |
| Tsp45I | GTSAC | 1 cut(s) | 508 |
| TspDTI | ATGAA | 1 cut(s) | 623 |
| TspGWI | ACGGA | 2 cut(s) | 84, 818 |
| TspRI | CASTG | 3 cut(s) | 34, 123, 265 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 159 |
| VneI | GTGCAC | 1 cut(s) | 482 |
| VpaK11BI | GGWCC | 1 cut(s) | 786 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 879 |
| XapI | RAATTY | 1 cut(s) | 715 |
| XceI | RCATGY | 2 cut(s) | 589, 928 |
| XmiI | GTMKAC | 2 cut(s) | 983, 1089 |
| XspI | CTAG | 3 cut(s) | 6, 131, 825 |
| ZraI | GACGTC | 1 cut(s) | 136 |