No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccBSI | CCGCTC | 1 cut(s) | 31 |
| AccI | GTMKAC | 2 cut(s) | 11, 497 |
| AccII | CGCG | 1 cut(s) | 523 |
| AclI | AACGTT | 1 cut(s) | 159 |
| AcoI | YGGCCR | 1 cut(s) | 243 |
| AcyI | GRCGYC | 1 cut(s) | 8 |
| AfaI | GTAC | 2 cut(s) | 395, 453 |
| AfeI | AGCGCT | 1 cut(s) | 110 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 21, 22, 274, 334, 355 |
| AflIII | ACRYGT | 1 cut(s) | 132 |
| AgsI | TTSAA | 1 cut(s) | 379 |
| AjiI | CACGTC | 1 cut(s) | 133 |
| AluBI | AGCT | 6 cut(s) | 37, 91, 205, 221, 238, 404 |
| AluI | AGCT | 6 cut(s) | 37, 91, 205, 221, 238, 404 |
| Alw26I | GTCTC | 2 cut(s) | 62, 168 |
| Aor51HI | AGCGCT | 1 cut(s) | 110 |
| AoxI | GGCC | 2 cut(s) | 243, 459 |
| ApeKI | GCWGC | 4 cut(s) | 34, 91, 106, 284 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 413, 445 |
| AspLEI | GCGC | 3 cut(s) | 111, 523, 525 |
| AspS9I | GGNCC | 3 cut(s) | 208, 459, 551 |
| AsuC2I | CCSGG | 1 cut(s) | 389 |
| AsuHPI | GGTGA | 3 cut(s) | 313, 329, 352 |
| AvaII | GGWCC | 2 cut(s) | 208, 551 |
| BbvCI | CCTCAGC | 1 cut(s) | 38 |
| BbvI | GCAGC | 4 cut(s) | 46, 78, 118, 271 |
| BceAI | ACGGC | 1 cut(s) | 350 |
| BciVI | GTATCC | 1 cut(s) | 208 |
| BclI | TGATCA | 1 cut(s) | 505 |
| BcnI | CCSGG | 1 cut(s) | 389 |
| BcoDI | GTCTC | 2 cut(s) | 62, 168 |
| BfaI | CTAG | 3 cut(s) | 95, 332, 589 |
| BfoI | RGCGCY | 1 cut(s) | 112 |
| BfuI | GTATCC | 1 cut(s) | 208 |
| BisI | GCNGC | 9 cut(s) | 6, 32, 35, 92, 107, 243, 285, 417, 466 |
| BlsI | GCNGC | 9 cut(s) | 7, 33, 36, 93, 108, 244, 286, 418, 467 |
| Bme1390I | CCNGG | 1 cut(s) | 389 |
| Bme18I | GGWCC | 2 cut(s) | 208, 551 |
| BmgBI | CACGTC | 1 cut(s) | 133 |
| BmgT120I | GGNCC | 3 cut(s) | 208, 459, 551 |
| BmrFI | CCNGG | 1 cut(s) | 389 |
| BmrI | ACTGGG | 1 cut(s) | 435 |
| BmsI | GCATC | 1 cut(s) | 130 |
| BmuI | ACTGGG | 1 cut(s) | 435 |
| BoxI | GACNNNNGTC | 1 cut(s) | 549 |
| BpmI | CTGGAG | 1 cut(s) | 44 |
| Bpu10I | CCTNAGC | 1 cut(s) | 38 |
| BpuEI | CTTGAG | 1 cut(s) | 200 |
| BpuMI | CCSGG | 1 cut(s) | 389 |
| BsaHI | GRCGYC | 1 cut(s) | 8 |
| BsaI | GGTCTC | 2 cut(s) | 62, 168 |
| BsaJI | CCNNGG | 7 cut(s) | 20, 117, 145, 246, 354, 387, 547 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 21, 22, 274, 334, 355 |
| Bse1I | ACTGG | 3 cut(s) | 441, 475, 517 |
| BseDI | CCNNGG | 7 cut(s) | 20, 117, 145, 246, 354, 387, 547 |
| BseGI | GGATG | 2 cut(s) | 145, 565 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 21, 22, 274, 334, 355 |
| BseMII | CTCAG | 3 cut(s) | 29, 302, 330 |
| BseNI | ACTGG | 3 cut(s) | 441, 475, 517 |
| BsePI | GCGCGC | 1 cut(s) | 521 |
| BseRI | GAGGAG | 1 cut(s) | 59 |
| BseXI | GCAGC | 4 cut(s) | 46, 78, 118, 271 |
| BseYI | CCCAGC | 3 cut(s) | 15, 270, 425 |
| Bsh1236I | CGCG | 1 cut(s) | 523 |
| BshFI | GGCC | 2 cut(s) | 245, 461 |
| BsiSI | CCGG | 2 cut(s) | 389, 528 |
| BslFI | GGGAC | 2 cut(s) | 370, 423 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 21, 22, 274, 334, 355 |
| BsmAI | GTCTC | 2 cut(s) | 62, 168 |
| BsmFI | GGGAC | 2 cut(s) | 370, 423 |
| BsnI | GGCC | 2 cut(s) | 245, 461 |
| Bso31I | GGTCTC | 2 cut(s) | 62, 168 |
| Bsp143I | GATC | 3 cut(s) | 48, 153, 505 |
| Bsp19I | CCATGG | 1 cut(s) | 547 |
| BspANI | GGCC | 2 cut(s) | 245, 461 |
| BspCNI | CTCAG | 3 cut(s) | 30, 301, 331 |
| BspFNI | CGCG | 1 cut(s) | 523 |
| BspTNI | GGTCTC | 2 cut(s) | 62, 168 |
| BsrBI | CCGCTC | 1 cut(s) | 31 |
| BsrI | ACTGG | 3 cut(s) | 441, 475, 517 |
| BssECI | CCNNGG | 7 cut(s) | 20, 117, 145, 246, 354, 387, 547 |
| BssHII | GCGCGC | 1 cut(s) | 521 |
| BssMI | GATC | 3 cut(s) | 48, 153, 505 |
| BssNI | GRCGYC | 1 cut(s) | 8 |
| BssT1I | CCWWGG | 4 cut(s) | 20, 117, 246, 547 |
| BstACI | GRCGYC | 1 cut(s) | 8 |
| BstC8I | GCNNGC | 5 cut(s) | 240, 258, 402, 463, 523 |
| BstDEI | CTNAG | 3 cut(s) | 38, 288, 339 |
| BstDSI | CCRYGG | 2 cut(s) | 145, 547 |
| BstEII | GGTNACC | 1 cut(s) | 358 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 332, 353 |
| BstF5I | GGATG | 2 cut(s) | 145, 565 |
| BstFNI | CGCG | 1 cut(s) | 523 |
| BstH2I | RGCGCY | 1 cut(s) | 112 |
| BstHHI | GCGC | 3 cut(s) | 111, 523, 525 |
| BstKTI | GATC | 3 cut(s) | 51, 156, 508 |
| BstMAI | GTCTC | 2 cut(s) | 62, 168 |
| BstMBI | GATC | 3 cut(s) | 48, 153, 505 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 235, 293, 422, 471 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 549 |
| BstPI | GGTNACC | 1 cut(s) | 358 |
| BstSCI | CCNGG | 1 cut(s) | 387 |
| BstUI | CGCG | 1 cut(s) | 523 |
| BstV1I | GCAGC | 4 cut(s) | 46, 78, 118, 271 |
| BsuI | GTATCC | 1 cut(s) | 208 |
| BsuRI | GGCC | 2 cut(s) | 245, 461 |
| BtgI | CCRYGG | 2 cut(s) | 145, 547 |
| BtrI | CACGTC | 1 cut(s) | 133 |
| BtsCI | GGATG | 2 cut(s) | 145, 565 |
| BtsI | GCAGTG | 1 cut(s) | 538 |
| BtsIMutI | CAGTG | 3 cut(s) | 482, 501, 538 |
| Cac8I | GCNNGC | 5 cut(s) | 240, 258, 402, 463, 523 |
| CfoI | GCGC | 3 cut(s) | 111, 523, 525 |
| Cfr13I | GGNCC | 3 cut(s) | 208, 459, 551 |
| CseI | GACGC | 1 cut(s) | 425 |
| Csp6I | GTAC | 2 cut(s) | 394, 452 |
| CviAII | CATG | 3 cut(s) | 194, 548, 580 |
| CviQI | GTAC | 2 cut(s) | 394, 452 |
| DdeI | CTNAG | 3 cut(s) | 38, 288, 339 |
| DpnI | GATC | 3 cut(s) | 50, 155, 507 |
| DpnII | GATC | 3 cut(s) | 48, 153, 505 |
| EaeI | YGGCCR | 1 cut(s) | 243 |
| EciI | GGCGGA | 2 cut(s) | 137, 275 |
| Eco130I | CCWWGG | 4 cut(s) | 20, 117, 246, 547 |
| Eco31I | GGTCTC | 2 cut(s) | 62, 168 |
| Eco32I | GATATC | 1 cut(s) | 265 |
| Eco47I | GGWCC | 2 cut(s) | 208, 551 |
| Eco47III | AGCGCT | 1 cut(s) | 110 |
| Eco91I | GGTNACC | 1 cut(s) | 358 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 332, 353 |
| EcoO65I | GGTNACC | 1 cut(s) | 358 |
| EcoRV | GATATC | 1 cut(s) | 265 |
| EcoT14I | CCWWGG | 4 cut(s) | 20, 117, 246, 547 |
| ErhI | CCWWGG | 4 cut(s) | 20, 117, 246, 547 |
| FaeI | CATG | 3 cut(s) | 197, 551, 583 |
| FaiI | YATR | 4 cut(s) | 195, 218, 549, 581 |
| FaqI | GGGAC | 2 cut(s) | 370, 423 |
| FatI | CATG | 3 cut(s) | 193, 547, 579 |
| FauI | CCCGC | 2 cut(s) | 249, 267 |
| FbaI | TGATCA | 1 cut(s) | 505 |
| FblI | GTMKAC | 2 cut(s) | 11, 497 |
| Fnu4HI | GCNGC | 9 cut(s) | 6, 32, 35, 92, 107, 243, 285, 417, 466 |
| FokI | GGATG | 2 cut(s) | 152, 572 |
| Fsp4HI | GCNGC | 9 cut(s) | 6, 32, 35, 92, 107, 243, 285, 417, 466 |
| FspBI | CTAG | 3 cut(s) | 95, 332, 589 |
| GlaI | GCGC | 3 cut(s) | 110, 522, 524 |
| GluI | GCNGC | 9 cut(s) | 6, 32, 35, 92, 107, 243, 285, 417, 466 |
| GsaI | CCCAGC | 3 cut(s) | 19, 274, 429 |
| GsuI | CTGGAG | 1 cut(s) | 44 |
| HaeII | RGCGCY | 1 cut(s) | 112 |
| HaeIII | GGCC | 2 cut(s) | 245, 461 |
| HapII | CCGG | 2 cut(s) | 389, 528 |
| HgaI | GACGC | 1 cut(s) | 425 |
| HhaI | GCGC | 3 cut(s) | 111, 523, 525 |
| Hin1I | GRCGYC | 1 cut(s) | 8 |
| Hin1II | CATG | 3 cut(s) | 197, 551, 583 |
| Hin6I | GCGC | 3 cut(s) | 109, 521, 523 |
| HinP1I | GCGC | 3 cut(s) | 109, 521, 523 |
| HincII | GTYRAC | 1 cut(s) | 12 |
| HindII | GTYRAC | 1 cut(s) | 12 |
| HinfI | GANTC | 2 cut(s) | 278, 563 |
| HpaII | CCGG | 2 cut(s) | 389, 528 |
| HphI | GGTGA | 3 cut(s) | 313, 329, 352 |
| Hpy166II | GTNNAC | 2 cut(s) | 12, 498 |
| Hpy188I | TCNGA | 1 cut(s) | 408 |
| Hpy188III | TCNNGA | 1 cut(s) | 61 |
| Hpy8I | GTNNAC | 2 cut(s) | 12, 498 |
| Hpy99I | CGWCG | 2 cut(s) | 13, 459 |
| HpyAV | CCTTC | 1 cut(s) | 415 |
| HpyCH4IV | ACGT | 3 cut(s) | 132, 159, 454 |
| HpyCH4V | TGCA | 1 cut(s) | 229 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 235, 293, 422, 471 |
| HpyF3I | CTNAG | 3 cut(s) | 38, 288, 339 |
| HpySE526I | ACGT | 3 cut(s) | 132, 159, 454 |
| Hsp92I | GRCGYC | 1 cut(s) | 8 |
| Hsp92II | CATG | 3 cut(s) | 197, 551, 583 |
| HspAI | GCGC | 3 cut(s) | 109, 521, 523 |
| Ksp22I | TGATCA | 1 cut(s) | 505 |
| Kzo9I | GATC | 3 cut(s) | 48, 153, 505 |
| LmnI | GCTCC | 1 cut(s) | 530 |
| Lsp1109I | GCAGC | 4 cut(s) | 46, 78, 118, 271 |
| LweI | GCATC | 1 cut(s) | 130 |
| MaeI | CTAG | 3 cut(s) | 95, 332, 589 |
| MaeII | ACGT | 3 cut(s) | 132, 159, 454 |
| MaeIII | GTNAC | 3 cut(s) | 128, 358, 542 |
| MalI | GATC | 3 cut(s) | 50, 155, 507 |
| MbiI | CCGCTC | 1 cut(s) | 31 |
| MboI | GATC | 3 cut(s) | 48, 153, 505 |
| MlyI | GAGTC | 1 cut(s) | 287 |
| MmeI | TCCRAC | 2 cut(s) | 117, 291 |
| MseI | TTAA | 1 cut(s) | 252 |
| MspA1I | CMGCKG | 3 cut(s) | 37, 274, 557 |
| MspI | CCGG | 2 cut(s) | 389, 528 |
| MspR9I | CCNGG | 1 cut(s) | 389 |
| MvnI | CGCG | 1 cut(s) | 523 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 235, 293, 422, 471 |
| NciI | CCSGG | 1 cut(s) | 389 |
| NcoI | CCATGG | 1 cut(s) | 547 |
| NdeII | GATC | 3 cut(s) | 48, 153, 505 |
| NlaIII | CATG | 3 cut(s) | 197, 551, 583 |
| NmeAIII | GCCGAG | 1 cut(s) | 379 |
| NmuCI | GTSAC | 3 cut(s) | 128, 358, 542 |
| PauI | GCGCGC | 1 cut(s) | 521 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 416 |
| PfeI | GAWTC | 1 cut(s) | 563 |
| PkrI | GCNGC | 9 cut(s) | 7, 33, 36, 93, 108, 244, 286, 418, 467 |
| PleI | GAGTC | 1 cut(s) | 286 |
| PpsI | GAGTC | 1 cut(s) | 286 |
| PshAI | GACNNNNGTC | 1 cut(s) | 549 |
| Psp1406I | AACGTT | 1 cut(s) | 159 |
| PspEI | GGTNACC | 1 cut(s) | 358 |
| PspFI | CCCAGC | 3 cut(s) | 15, 270, 425 |
| PspPI | GGNCC | 3 cut(s) | 208, 459, 551 |
| PteI | GCGCGC | 1 cut(s) | 521 |
| PvuII | CAGCTG | 1 cut(s) | 37 |
| RsaI | GTAC | 2 cut(s) | 395, 453 |
| RsaNI | GTAC | 2 cut(s) | 394, 452 |
| SalI | GTCGAC | 1 cut(s) | 10 |
| SaqAI | TTAA | 1 cut(s) | 252 |
| SatI | GCNGC | 9 cut(s) | 6, 32, 35, 92, 107, 243, 285, 417, 466 |
| Sau3AI | GATC | 3 cut(s) | 48, 153, 505 |
| Sau96I | GGNCC | 3 cut(s) | 208, 459, 551 |
| SchI | GAGTC | 1 cut(s) | 287 |
| ScrFI | CCNGG | 1 cut(s) | 389 |
| SfaNI | GCATC | 1 cut(s) | 130 |
| SinI | GGWCC | 2 cut(s) | 208, 551 |
| SmlI | CTYRAG | 1 cut(s) | 179 |
| SmoI | CTYRAG | 1 cut(s) | 179 |
| SspMI | CTAG | 3 cut(s) | 95, 332, 589 |
| StyD4I | CCNGG | 1 cut(s) | 387 |
| StyI | CCWWGG | 4 cut(s) | 20, 117, 246, 547 |
| TaiI | ACGT | 3 cut(s) | 135, 162, 457 |
| TaqI | TCGA | 2 cut(s) | 11, 102 |
| TatI | WGTACW | 1 cut(s) | 393 |
| TauI | GCSGC | 5 cut(s) | 8, 34, 245, 419, 468 |
| TfiI | GAWTC | 1 cut(s) | 563 |
| Tru1I | TTAA | 1 cut(s) | 252 |
| Tru9I | TTAA | 1 cut(s) | 252 |
| TscAI | CASTG | 3 cut(s) | 482, 508, 538 |
| TseFI | GTSAC | 3 cut(s) | 128, 358, 542 |
| TseI | GCWGC | 4 cut(s) | 34, 91, 106, 284 |
| Tsp45I | GTSAC | 3 cut(s) | 128, 358, 542 |
| TspGWI | ACGGA | 1 cut(s) | 425 |
| TspRI | CASTG | 3 cut(s) | 482, 508, 538 |
| VpaK11BI | GGWCC | 2 cut(s) | 208, 551 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 332, 353 |
| XmiI | GTMKAC | 2 cut(s) | 11, 497 |
| XspI | CTAG | 3 cut(s) | 95, 332, 589 |