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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 283 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 502 |
| Acc36I | ACCTGC | 1 cut(s) | 283 |
| AccB1I | GGYRCC | 5 cut(s) | 149, 250, 295, 603, 959 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 666, 969 |
| AccBSI | CCGCTC | 3 cut(s) | 442, 526, 1142 |
| AclWI | GGATC | 3 cut(s) | 35, 735, 1156 |
| AcoI | YGGCCR | 3 cut(s) | 121, 657, 738 |
| AcsI | RAATTY | 1 cut(s) | 446 |
| AcuI | CTGAAG | 5 cut(s) | 537, 554, 743, 749, 968 |
| AcyI | GRCGYC | 3 cut(s) | 150, 960, 1127 |
| AfaI | GTAC | 1 cut(s) | 5 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 60 |
| AjnI | CCWGG | 3 cut(s) | 282, 936, 1167 |
| AleI | CACNNNNGTG | 1 cut(s) | 629 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 437, 469 |
| AluBI | AGCT | 9 cut(s) | 182, 487, 565, 586, 649, 716, 769, 895, 1164 |
| AluI | AGCT | 9 cut(s) | 182, 487, 565, 586, 649, 716, 769, 895, 1164 |
| Alw21I | GWGCWC | 1 cut(s) | 626 |
| Alw26I | GTCTC | 2 cut(s) | 557, 566 |
| Alw44I | GTGCAC | 1 cut(s) | 622 |
| AlwI | GGATC | 3 cut(s) | 35, 735, 1156 |
| Ama87I | CYCGRG | 3 cut(s) | 674, 1104, 1217 |
| AoxI | GGCC | 6 cut(s) | 121, 162, 280, 657, 738, 1175 |
| ApaLI | GTGCAC | 1 cut(s) | 622 |
| ApeKI | GCWGC | 9 cut(s) | 8, 20, 25, 136, 352, 565, 854, 1164, 1211 |
| ApoI | RAATTY | 1 cut(s) | 446 |
| AspLEI | GCGC | 3 cut(s) | 25, 152, 962 |
| AspS9I | GGNCC | 4 cut(s) | 162, 201, 670, 1175 |
| AsuC2I | CCSGG | 2 cut(s) | 199, 994 |
| AsuHPI | GGTGA | 5 cut(s) | 70, 808, 985, 1135, 1208 |
| AsuNHI | GCTAGC | 1 cut(s) | 895 |
| AvaI | CYCGRG | 3 cut(s) | 674, 1104, 1217 |
| AvaII | GGWCC | 2 cut(s) | 201, 670 |
| BaeGI | GKGCMC | 1 cut(s) | 626 |
| BalI | TGGCCA | 2 cut(s) | 123, 659 |
| BanI | GGYRCC | 5 cut(s) | 149, 250, 295, 603, 959 |
| BbsI | GAAGAC | 1 cut(s) | 77 |
| Bbv12I | GWGCWC | 1 cut(s) | 626 |
| BbvI | GCAGC | 8 cut(s) | 32, 37, 123, 339, 552, 841, 1151, 1198 |
| BccI | CCATC | 3 cut(s) | 105, 485, 1106 |
| BceAI | ACGGC | 1 cut(s) | 614 |
| BciT130I | CCWGG | 3 cut(s) | 284, 938, 1169 |
| BclI | TGATCA | 1 cut(s) | 385 |
| BcnI | CCSGG | 2 cut(s) | 199, 994 |
| BcoDI | GTCTC | 2 cut(s) | 557, 566 |
| BfaI | CTAG | 3 cut(s) | 398, 701, 896 |
| BfmI | CTRYAG | 3 cut(s) | 9, 566, 882 |
| BfoI | RGCGCY | 2 cut(s) | 153, 963 |
| BfuAI | ACCTGC | 1 cut(s) | 283 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 133 |
| Bme1390I | CCNGG | 5 cut(s) | 199, 284, 938, 994, 1169 |
| Bme18I | GGWCC | 2 cut(s) | 201, 670 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 60 |
| BmeT110I | CYCGRG | 3 cut(s) | 674, 1104, 1217 |
| BmgT120I | GGNCC | 4 cut(s) | 162, 201, 670, 1175 |
| BmrFI | CCNGG | 5 cut(s) | 199, 284, 938, 994, 1169 |
| BmrI | ACTGGG | 2 cut(s) | 214, 979 |
| BmsI | GCATC | 3 cut(s) | 625, 1033, 1125 |
| BmtI | GCTAGC | 1 cut(s) | 899 |
| BmuI | ACTGGG | 2 cut(s) | 214, 979 |
| BpiI | GAAGAC | 1 cut(s) | 77 |
| BpmI | CTGGAG | 4 cut(s) | 177, 539, 791, 1211 |
| BpuMI | CCSGG | 2 cut(s) | 199, 994 |
| BsaHI | GRCGYC | 3 cut(s) | 150, 960, 1127 |
| BsaI | GGTCTC | 2 cut(s) | 557, 566 |
| BsaJI | CCNNGG | 4 cut(s) | 612, 630, 640, 861 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 175, 205, 677, 707, 1039, 1069 |
| Bse118I | RCCGGY | 1 cut(s) | 167 |
| Bse1I | ACTGG | 2 cut(s) | 220, 974 |
| Bse3DI | GCAATG | 1 cut(s) | 273 |
| BseBI | CCWGG | 3 cut(s) | 284, 938, 1169 |
| BseDI | CCNNGG | 4 cut(s) | 612, 630, 640, 861 |
| BseGI | GGATG | 5 cut(s) | 496, 598, 640, 838, 1024 |
| BseMI | GCAATG | 1 cut(s) | 273 |
| BseMII | CTCAG | 2 cut(s) | 154, 429 |
| BseNI | ACTGG | 2 cut(s) | 220, 974 |
| BseRI | GAGGAG | 2 cut(s) | 383, 386 |
| BseSI | GKGCMC | 1 cut(s) | 626 |
| BseXI | GCAGC | 8 cut(s) | 32, 37, 123, 339, 552, 841, 1151, 1198 |
| BseYI | CCCAGC | 1 cut(s) | 1172 |
| BshFI | GGCC | 6 cut(s) | 123, 164, 282, 659, 740, 1177 |
| BshNI | GGYRCC | 5 cut(s) | 149, 250, 295, 603, 959 |
| BsiHKAI | GWGCWC | 1 cut(s) | 626 |
| BsiHKCI | CYCGRG | 3 cut(s) | 674, 1104, 1217 |
| BsiSI | CCGG | 5 cut(s) | 128, 168, 198, 993, 1028 |
| BslFI | GGGAC | 4 cut(s) | 214, 508, 683, 967 |
| BsmAI | GTCTC | 2 cut(s) | 557, 566 |
| BsmFI | GGGAC | 4 cut(s) | 214, 508, 683, 967 |
| BsnI | GGCC | 6 cut(s) | 123, 164, 282, 659, 740, 1177 |
| Bso31I | GGTCTC | 2 cut(s) | 557, 566 |
| BsoBI | CYCGRG | 3 cut(s) | 674, 1104, 1217 |
| Bsp1286I | GDGCHC | 1 cut(s) | 626 |
| Bsp143I | GATC | 4 cut(s) | 40, 385, 727, 1148 |
| Bsp19I | CCATGG | 1 cut(s) | 861 |
| BspANI | GGCC | 6 cut(s) | 123, 164, 282, 659, 740, 1177 |
| BspCNI | CTCAG | 2 cut(s) | 153, 430 |
| BspHI | TCATGA | 1 cut(s) | 1089 |
| BspMAI | CTGCAG | 3 cut(s) | 13, 570, 886 |
| BspMI | ACCTGC | 1 cut(s) | 283 |
| BspOI | GCTAGC | 1 cut(s) | 899 |
| BspPI | GGATC | 3 cut(s) | 35, 735, 1156 |
| BspT107I | GGYRCC | 5 cut(s) | 149, 250, 295, 603, 959 |
| BspTNI | GGTCTC | 2 cut(s) | 557, 566 |
| BsrBI | CCGCTC | 3 cut(s) | 442, 526, 1142 |
| BsrDI | GCAATG | 1 cut(s) | 273 |
| BsrFI | RCCGGY | 1 cut(s) | 167 |
| BsrI | ACTGG | 2 cut(s) | 220, 974 |
| BssAI | RCCGGY | 1 cut(s) | 167 |
| BssECI | CCNNGG | 4 cut(s) | 612, 630, 640, 861 |
| BssMI | GATC | 4 cut(s) | 40, 385, 727, 1148 |
| BssNI | GRCGYC | 3 cut(s) | 150, 960, 1127 |
| BssT1I | CCWWGG | 2 cut(s) | 612, 861 |
| Bst2UI | CCWGG | 3 cut(s) | 284, 938, 1169 |
| Bst4CI | ACNGT | 5 cut(s) | 37, 58, 187, 250, 499 |
| Bst6I | CTCTTC | 1 cut(s) | 833 |
| BstACI | GRCGYC | 3 cut(s) | 150, 960, 1127 |
| BstC8I | GCNNGC | 9 cut(s) | 18, 30, 121, 125, 280, 485, 588, 647, 897 |
| BstDEI | CTNAG | 3 cut(s) | 140, 438, 849 |
| BstDSI | CCRYGG | 3 cut(s) | 630, 640, 861 |
| BstENI | CCTNNNNNAGG | 3 cut(s) | 611, 827, 905 |
| BstF5I | GGATG | 5 cut(s) | 496, 598, 640, 838, 1024 |
| BstH2I | RGCGCY | 2 cut(s) | 153, 963 |
| BstHHI | GCGC | 3 cut(s) | 25, 152, 962 |
| BstKTI | GATC | 4 cut(s) | 43, 388, 730, 1151 |
| BstMAI | GTCTC | 2 cut(s) | 557, 566 |
| BstMBI | GATC | 4 cut(s) | 40, 385, 727, 1148 |
| BstNI | CCWGG | 3 cut(s) | 284, 938, 1169 |
| BstNSI | RCATGY | 1 cut(s) | 946 |
| BstSCI | CCNGG | 5 cut(s) | 197, 282, 936, 992, 1167 |
| BstSFI | CTRYAG | 3 cut(s) | 9, 566, 882 |
| BstSLI | GKGCMC | 1 cut(s) | 626 |
| BstV1I | GCAGC | 8 cut(s) | 32, 37, 123, 339, 552, 841, 1151, 1198 |
| BstV2I | GAAGAC | 1 cut(s) | 77 |
| BstX2I | RGATCY | 1 cut(s) | 1148 |
| BstYI | RGATCY | 1 cut(s) | 1148 |
| BsuRI | GGCC | 6 cut(s) | 123, 164, 282, 659, 740, 1177 |
| BtgI | CCRYGG | 3 cut(s) | 630, 640, 861 |
| BtsCI | GGATG | 5 cut(s) | 496, 598, 640, 838, 1024 |
| BtsI | GCAGTG | 1 cut(s) | 624 |
| BtsIMutI | CAGTG | 3 cut(s) | 227, 504, 624 |
| BveI | ACCTGC | 1 cut(s) | 283 |
| Cac8I | GCNNGC | 9 cut(s) | 18, 30, 121, 125, 280, 485, 588, 647, 897 |
| CciI | TCATGA | 1 cut(s) | 1089 |
| CfoI | GCGC | 3 cut(s) | 25, 152, 962 |
| Cfr10I | RCCGGY | 1 cut(s) | 167 |
| Cfr13I | GGNCC | 4 cut(s) | 162, 201, 670, 1175 |
| CseI | GACGC | 2 cut(s) | 969, 1135 |
| Csp6I | GTAC | 1 cut(s) | 4 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 329, 364 |
| CviAII | CATG | 6 cut(s) | 327, 507, 862, 943, 1090, 1120 |
| CviQI | GTAC | 1 cut(s) | 4 |
| DdeI | CTNAG | 3 cut(s) | 140, 438, 849 |
| DinI | GGCGCC | 2 cut(s) | 151, 961 |
| DpnI | GATC | 4 cut(s) | 42, 387, 729, 1150 |
| DpnII | GATC | 4 cut(s) | 40, 385, 727, 1148 |
| DraI | TTTAAA | 1 cut(s) | 874 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 502 |
| DriI | GACNNNNNGTC | 1 cut(s) | 60 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 502 |
| EaeI | YGGCCR | 3 cut(s) | 121, 657, 738 |
| Eam1104I | CTCTTC | 1 cut(s) | 833 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 60 |
| EarI | CTCTTC | 1 cut(s) | 833 |
| EciI | GGCGGA | 2 cut(s) | 605, 1046 |
| Eco130I | CCWWGG | 2 cut(s) | 612, 861 |
| Eco31I | GGTCTC | 2 cut(s) | 557, 566 |
| Eco47I | GGWCC | 2 cut(s) | 201, 670 |
| Eco57I | CTGAAG | 5 cut(s) | 537, 554, 743, 749, 968 |
| Eco88I | CYCGRG | 3 cut(s) | 674, 1104, 1217 |
| EcoNI | CCTNNNNNAGG | 3 cut(s) | 611, 827, 905 |
| EcoO109I | RGGNCCY | 1 cut(s) | 670 |
| EcoRI | GAATTC | 1 cut(s) | 446 |
| EcoRII | CCWGG | 3 cut(s) | 282, 936, 1167 |
| EcoT14I | CCWWGG | 2 cut(s) | 612, 861 |
| EgeI | GGCGCC | 2 cut(s) | 151, 961 |
| EheI | GGCGCC | 2 cut(s) | 151, 961 |
| ErhI | CCWWGG | 2 cut(s) | 612, 861 |
| FaeI | CATG | 6 cut(s) | 330, 510, 865, 946, 1093, 1123 |
| FaqI | GGGAC | 4 cut(s) | 214, 508, 683, 967 |
| FatI | CATG | 6 cut(s) | 326, 506, 861, 942, 1089, 1119 |
| FauI | CCCGC | 2 cut(s) | 124, 435 |
| FbaI | TGATCA | 1 cut(s) | 385 |
| FokI | GGATG | 5 cut(s) | 503, 605, 647, 845, 1011 |
| FspBI | CTAG | 3 cut(s) | 398, 701, 896 |
| GlaI | GCGC | 3 cut(s) | 24, 151, 961 |
| GsaI | CCCAGC | 1 cut(s) | 1176 |
| GsuI | CTGGAG | 4 cut(s) | 177, 539, 791, 1211 |
| HaeII | RGCGCY | 2 cut(s) | 153, 963 |
| HaeIII | GGCC | 6 cut(s) | 123, 164, 282, 659, 740, 1177 |
| HapII | CCGG | 5 cut(s) | 128, 168, 198, 993, 1028 |
| HgaI | GACGC | 2 cut(s) | 969, 1135 |
| HhaI | GCGC | 3 cut(s) | 25, 152, 962 |
| Hin1I | GRCGYC | 3 cut(s) | 150, 960, 1127 |
| Hin1II | CATG | 6 cut(s) | 330, 510, 865, 946, 1093, 1123 |
| Hin6I | GCGC | 3 cut(s) | 23, 150, 960 |
| HinP1I | GCGC | 3 cut(s) | 23, 150, 960 |
| HinfI | GANTC | 9 cut(s) | 61, 73, 401, 434, 760, 773, 841, 1037, 1048 |
| HpaII | CCGG | 5 cut(s) | 128, 168, 198, 993, 1028 |
| HphI | GGTGA | 5 cut(s) | 70, 808, 985, 1135, 1208 |
| Hpy166II | GTNNAC | 1 cut(s) | 624 |
| Hpy188I | TCNGA | 4 cut(s) | 143, 429, 439, 1158 |
| Hpy188III | TCNNGA | 6 cut(s) | 398, 556, 757, 1090, 1217, 1219 |
| Hpy8I | GTNNAC | 1 cut(s) | 624 |
| Hpy99I | CGWCG | 1 cut(s) | 70 |
| HpyAV | CCTTC | 7 cut(s) | 119, 202, 529, 542, 718, 910, 949 |
| HpyCH4III | ACNGT | 5 cut(s) | 37, 58, 187, 250, 499 |
| HpyCH4V | TGCA | 6 cut(s) | 11, 340, 568, 624, 791, 884 |
| HpyF3I | CTNAG | 3 cut(s) | 140, 438, 849 |
| Hsp92I | GRCGYC | 3 cut(s) | 150, 960, 1127 |
| Hsp92II | CATG | 6 cut(s) | 330, 510, 865, 946, 1093, 1123 |
| HspAI | GCGC | 3 cut(s) | 23, 150, 960 |
| KasI | GGCGCC | 2 cut(s) | 149, 959 |
| Ksp22I | TGATCA | 1 cut(s) | 385 |
| Kzo9I | GATC | 4 cut(s) | 40, 385, 727, 1148 |
| LmnI | GCTCC | 3 cut(s) | 174, 196, 562 |
| Lsp1109I | GCAGC | 8 cut(s) | 32, 37, 123, 339, 552, 841, 1151, 1198 |
| LweI | GCATC | 3 cut(s) | 625, 1033, 1125 |
| MaeI | CTAG | 3 cut(s) | 398, 701, 896 |
| MaeIII | GTNAC | 3 cut(s) | 268, 842, 1123 |
| MalI | GATC | 4 cut(s) | 42, 387, 729, 1150 |
| MbiI | CCGCTC | 3 cut(s) | 442, 526, 1142 |
| MboI | GATC | 4 cut(s) | 40, 385, 727, 1148 |
| MboII | GAAGA | 4 cut(s) | 82, 755, 850, 1211 |
| MflI | RGATCY | 1 cut(s) | 1148 |
| MhlI | GDGCHC | 1 cut(s) | 626 |
| MlsI | TGGCCA | 2 cut(s) | 123, 659 |
| MluCI | AATT | 2 cut(s) | 446, 1222 |
| MluNI | TGGCCA | 2 cut(s) | 123, 659 |
| Mly113I | GGCGCC | 2 cut(s) | 150, 960 |
| MlyI | GAGTC | 7 cut(s) | 67, 70, 395, 428, 782, 850, 1042 |
| MmeI | TCCRAC | 3 cut(s) | 152, 786, 1092 |
| Mox20I | TGGCCA | 2 cut(s) | 123, 659 |
| MscI | TGGCCA | 2 cut(s) | 123, 659 |
| MseI | TTAA | 1 cut(s) | 873 |
| MslI | CAYNNNNRTG | 2 cut(s) | 629, 1121 |
| Msp20I | TGGCCA | 2 cut(s) | 123, 659 |
| MspA1I | CMGCKG | 5 cut(s) | 119, 317, 769, 1189, 1211 |
| MspI | CCGG | 5 cut(s) | 128, 168, 198, 993, 1028 |
| MspR9I | CCNGG | 5 cut(s) | 199, 284, 938, 994, 1169 |
| MvaI | CCWGG | 3 cut(s) | 284, 938, 1169 |
| NarI | GGCGCC | 2 cut(s) | 150, 960 |
| NciI | CCSGG | 2 cut(s) | 199, 994 |
| NcoI | CCATGG | 1 cut(s) | 861 |
| NdeII | GATC | 4 cut(s) | 40, 385, 727, 1148 |
| NheI | GCTAGC | 1 cut(s) | 895 |
| NlaIII | CATG | 6 cut(s) | 330, 510, 865, 946, 1093, 1123 |
| NmeAIII | GCCGAG | 1 cut(s) | 178 |
| NmuCI | GTSAC | 2 cut(s) | 842, 1123 |
| NspI | RCATGY | 1 cut(s) | 946 |
| OliI | CACNNNNGTG | 1 cut(s) | 629 |
| PaeR7I | CTCGAG | 2 cut(s) | 674, 1217 |
| PagI | TCATGA | 1 cut(s) | 1089 |
| PaqCI | CACCTGC | 1 cut(s) | 283 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 62 |
| PfeI | GAWTC | 2 cut(s) | 760, 1037 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 666, 969 |
| PleI | GAGTC | 7 cut(s) | 67, 69, 395, 428, 781, 849, 1042 |
| PluTI | GGCGCC | 2 cut(s) | 153, 963 |
| PpsI | GAGTC | 7 cut(s) | 67, 69, 395, 428, 781, 849, 1042 |
| PpuMI | RGGWCCY | 1 cut(s) | 670 |
| Psp5II | RGGWCCY | 1 cut(s) | 670 |
| Psp6I | CCWGG | 3 cut(s) | 282, 936, 1167 |
| PspFI | CCCAGC | 1 cut(s) | 1172 |
| PspGI | CCWGG | 3 cut(s) | 282, 936, 1167 |
| PspPI | GGNCC | 4 cut(s) | 162, 201, 670, 1175 |
| PspPPI | RGGWCCY | 1 cut(s) | 670 |
| PspXI | VCTCGAGB | 1 cut(s) | 674 |
| PstI | CTGCAG | 3 cut(s) | 13, 570, 886 |
| PsuI | RGATCY | 1 cut(s) | 1148 |
| PvuII | CAGCTG | 1 cut(s) | 769 |
| RsaI | GTAC | 1 cut(s) | 5 |
| RsaNI | GTAC | 1 cut(s) | 4 |
| RseI | CAYNNNNRTG | 2 cut(s) | 629, 1121 |
| SaqAI | TTAA | 1 cut(s) | 873 |
| Sau3AI | GATC | 4 cut(s) | 40, 385, 727, 1148 |
| Sau96I | GGNCC | 4 cut(s) | 162, 201, 670, 1175 |
| SchI | GAGTC | 7 cut(s) | 67, 70, 395, 428, 782, 850, 1042 |
| ScrFI | CCNGG | 5 cut(s) | 199, 284, 938, 994, 1169 |
| SduI | GDGCHC | 1 cut(s) | 626 |
| SfaNI | GCATC | 3 cut(s) | 625, 1033, 1125 |
| SfcI | CTRYAG | 3 cut(s) | 9, 566, 882 |
| SfoI | GGCGCC | 2 cut(s) | 151, 961 |
| Sfr274I | CTCGAG | 2 cut(s) | 674, 1217 |
| SinI | GGWCC | 2 cut(s) | 201, 670 |
| SlaI | CTCGAG | 2 cut(s) | 674, 1217 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 629, 1121 |
| SmlI | CTYRAG | 2 cut(s) | 674, 1217 |
| SmoI | CTYRAG | 2 cut(s) | 674, 1217 |
| Sse9I | AATT | 2 cut(s) | 446, 1222 |
| SspDI | GGCGCC | 2 cut(s) | 149, 959 |
| SspMI | CTAG | 3 cut(s) | 398, 701, 896 |
| StyD4I | CCNGG | 5 cut(s) | 197, 282, 936, 992, 1167 |
| StyI | CCWWGG | 2 cut(s) | 612, 861 |
| TaaI | ACNGT | 5 cut(s) | 37, 58, 187, 250, 499 |
| TaqI | TCGA | 5 cut(s) | 68, 546, 675, 756, 1218 |
| TasI | AATT | 2 cut(s) | 446, 1222 |
| TauI | GCSGC | 8 cut(s) | 167, 317, 529, 604, 740, 782, 914, 1211 |
| TfiI | GAWTC | 2 cut(s) | 760, 1037 |
| Tru1I | TTAA | 1 cut(s) | 873 |
| Tru9I | TTAA | 1 cut(s) | 873 |
| TscAI | CASTG | 3 cut(s) | 227, 504, 631 |
| TseFI | GTSAC | 2 cut(s) | 842, 1123 |
| TseI | GCWGC | 9 cut(s) | 8, 20, 25, 136, 352, 565, 854, 1164, 1211 |
| Tsp45I | GTSAC | 2 cut(s) | 842, 1123 |
| TspDTI | ATGAA | 1 cut(s) | 1078 |
| TspGWI | ACGGA | 2 cut(s) | 54, 254 |
| TspRI | CASTG | 3 cut(s) | 227, 504, 631 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 666, 969 |
| VneI | GTGCAC | 1 cut(s) | 622 |
| VpaK11BI | GGWCC | 2 cut(s) | 201, 670 |
| XagI | CCTNNNNNAGG | 3 cut(s) | 611, 827, 905 |
| XapI | RAATTY | 1 cut(s) | 446 |
| XbaI | TCTAGA | 1 cut(s) | 397 |
| XceI | RCATGY | 1 cut(s) | 946 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 280, 583 |
| XhoI | CTCGAG | 2 cut(s) | 674, 1217 |
| XspI | CTAG | 3 cut(s) | 398, 701, 896 |