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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 1035 |
| AccB1I | GGYRCC | 1 cut(s) | 289 |
| AccBSI | CCGCTC | 2 cut(s) | 283, 706 |
| AccII | CGCG | 1 cut(s) | 428 |
| AclWI | GGATC | 2 cut(s) | 788, 911 |
| AcoI | YGGCCR | 3 cut(s) | 559, 765, 998 |
| AcsI | RAATTY | 1 cut(s) | 437 |
| AcuI | CTGAAG | 1 cut(s) | 776 |
| AfaI | GTAC | 3 cut(s) | 41, 431, 994 |
| AfiI | CCNNNNNNNGG | 8 cut(s) | 261, 318, 523, 856, 900, 936, 961, 1037 |
| AgsI | TTSAA | 1 cut(s) | 173 |
| AjnI | CCWGG | 4 cut(s) | 47, 213, 591, 880 |
| AluBI | AGCT | 9 cut(s) | 176, 182, 549, 586, 610, 640, 676, 748, 853 |
| AluI | AGCT | 9 cut(s) | 176, 182, 549, 586, 610, 640, 676, 748, 853 |
| Alw21I | GWGCWC | 4 cut(s) | 123, 588, 642, 729 |
| Alw26I | GTCTC | 3 cut(s) | 276, 364, 970 |
| AlwI | GGATC | 2 cut(s) | 788, 911 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 631 |
| AoxI | GGCC | 7 cut(s) | 341, 380, 559, 765, 927, 972, 998 |
| ApaI | GGGCCC | 1 cut(s) | 384 |
| ApeKI | GCWGC | 4 cut(s) | 235, 607, 845, 986 |
| ApoI | RAATTY | 1 cut(s) | 437 |
| AspLEI | GCGC | 5 cut(s) | 152, 267, 891, 1036, 1067 |
| AspS9I | GGNCC | 4 cut(s) | 380, 381, 1003, 1008 |
| AsuC2I | CCSGG | 1 cut(s) | 997 |
| AsuHPI | GGTGA | 5 cut(s) | 85, 106, 200, 340, 835 |
| AsuII | TTCGAA | 1 cut(s) | 602 |
| AvaII | GGWCC | 2 cut(s) | 1003, 1008 |
| BaeGI | GKGCMC | 3 cut(s) | 255, 294, 384 |
| BalI | TGGCCA | 2 cut(s) | 561, 767 |
| BanI | GGYRCC | 1 cut(s) | 289 |
| BanII | GRGCYC | 3 cut(s) | 384, 588, 642 |
| BauI | CACGAG | 1 cut(s) | 581 |
| BbsI | GAAGAC | 1 cut(s) | 305 |
| Bbv12I | GWGCWC | 4 cut(s) | 123, 588, 642, 729 |
| BbvI | GCAGC | 4 cut(s) | 247, 619, 832, 973 |
| BccI | CCATC | 5 cut(s) | 64, 500, 570, 754, 1019 |
| BceAI | ACGGC | 1 cut(s) | 671 |
| BciT130I | CCWGG | 4 cut(s) | 49, 215, 593, 882 |
| BclI | TGATCA | 2 cut(s) | 190, 910 |
| BcnI | CCSGG | 1 cut(s) | 997 |
| BcoDI | GTCTC | 3 cut(s) | 276, 364, 970 |
| BfaI | CTAG | 1 cut(s) | 261 |
| BfmI | CTRYAG | 2 cut(s) | 530, 650 |
| BfoI | RGCGCY | 3 cut(s) | 153, 268, 1068 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 53 |
| BisI | GCNGC | 9 cut(s) | 45, 131, 236, 329, 426, 608, 623, 846, 987 |
| BlpI | GCTNAGC | 2 cut(s) | 672, 1068 |
| BlsI | GCNGC | 9 cut(s) | 46, 132, 237, 330, 427, 609, 624, 847, 988 |
| Bme1390I | CCNGG | 5 cut(s) | 49, 215, 593, 882, 997 |
| Bme18I | GGWCC | 2 cut(s) | 1003, 1008 |
| BmgT120I | GGNCC | 4 cut(s) | 380, 381, 1003, 1008 |
| BmiI | GGNNCC | 7 cut(s) | 212, 291, 327, 381, 382, 511, 1042 |
| BmrFI | CCNGG | 5 cut(s) | 49, 215, 593, 882, 997 |
| BmrI | ACTGGG | 2 cut(s) | 107, 949 |
| BmsI | GCATC | 1 cut(s) | 658 |
| BmuI | ACTGGG | 2 cut(s) | 107, 949 |
| BpiI | GAAGAC | 1 cut(s) | 305 |
| BpmI | CTGGAG | 4 cut(s) | 198, 653, 713, 875 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 672, 1068 |
| Bpu14I | TTCGAA | 1 cut(s) | 602 |
| BpuEI | CTTGAG | 3 cut(s) | 50, 632, 722 |
| BpuMI | CCSGG | 1 cut(s) | 997 |
| BsaBI | GATNNNNATC | 1 cut(s) | 915 |
| BsaI | GGTCTC | 3 cut(s) | 276, 364, 970 |
| BsaJI | CCNNGG | 3 cut(s) | 768, 921, 960 |
| BsaWI | WCCGGW | 2 cut(s) | 893, 1005 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 791, 821 |
| Bsc4I | CCNNNNNNNGG | 8 cut(s) | 261, 318, 523, 856, 900, 936, 961, 1037 |
| Bse118I | RCCGGY | 2 cut(s) | 203, 1078 |
| Bse1I | ACTGG | 5 cut(s) | 100, 113, 164, 305, 955 |
| Bse3DI | GCAATG | 1 cut(s) | 312 |
| Bse8I | GATNNNNATC | 1 cut(s) | 915 |
| BseBI | CCWGG | 4 cut(s) | 49, 215, 593, 882 |
| BseDI | CCNNGG | 3 cut(s) | 768, 921, 960 |
| BseGI | GGATG | 1 cut(s) | 673 |
| BseJI | GATNNNNATC | 1 cut(s) | 915 |
| BseLI | CCNNNNNNNGG | 8 cut(s) | 261, 318, 523, 856, 900, 936, 961, 1037 |
| BseMI | GCAATG | 1 cut(s) | 312 |
| BseMII | CTCAG | 4 cut(s) | 160, 287, 686, 1082 |
| BseNI | ACTGG | 5 cut(s) | 100, 113, 164, 305, 955 |
| BseRI | GAGGAG | 3 cut(s) | 407, 650, 880 |
| BseSI | GKGCMC | 3 cut(s) | 255, 294, 384 |
| BseX3I | CGGCCG | 1 cut(s) | 998 |
| BseXI | GCAGC | 4 cut(s) | 247, 619, 832, 973 |
| BseYI | CCCAGC | 3 cut(s) | 60, 487, 849 |
| BsgI | GTGCAG | 2 cut(s) | 254, 419 |
| Bsh1236I | CGCG | 1 cut(s) | 428 |
| Bsh1285I | CGRYCG | 1 cut(s) | 1001 |
| BshFI | GGCC | 7 cut(s) | 343, 382, 561, 767, 929, 974, 1000 |
| BshNI | GGYRCC | 1 cut(s) | 289 |
| BsiEI | CGRYCG | 1 cut(s) | 1001 |
| BsiHKAI | GWGCWC | 4 cut(s) | 123, 588, 642, 729 |
| BsiSI | CCGG | 6 cut(s) | 204, 894, 997, 1001, 1006, 1079 |
| BslI | CCNNNNNNNGG | 8 cut(s) | 261, 318, 523, 856, 900, 936, 961, 1037 |
| BsmAI | GTCTC | 3 cut(s) | 276, 364, 970 |
| BsnI | GGCC | 7 cut(s) | 343, 382, 561, 767, 929, 974, 1000 |
| Bso31I | GGTCTC | 3 cut(s) | 276, 364, 970 |
| Bsp119I | TTCGAA | 1 cut(s) | 602 |
| Bsp120I | GGGCCC | 1 cut(s) | 380 |
| Bsp1286I | GDGCHC | 7 cut(s) | 123, 255, 294, 384, 588, 642, 729 |
| Bsp143I | GATC | 5 cut(s) | 190, 780, 910, 916, 1045 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 672, 1068 |
| BspANI | GGCC | 7 cut(s) | 343, 382, 561, 767, 929, 974, 1000 |
| BspCNI | CTCAG | 4 cut(s) | 159, 286, 685, 1081 |
| BspFNI | CGCG | 1 cut(s) | 428 |
| BspHI | TCATGA | 2 cut(s) | 913, 1014 |
| BspLI | GGNNCC | 7 cut(s) | 212, 291, 327, 381, 382, 511, 1042 |
| BspMAI | CTGCAG | 1 cut(s) | 654 |
| BspPI | GGATC | 2 cut(s) | 788, 911 |
| BspQI | GCTCTTC | 1 cut(s) | 593 |
| BspT104I | TTCGAA | 1 cut(s) | 602 |
| BspT107I | GGYRCC | 1 cut(s) | 289 |
| BspTNI | GGTCTC | 3 cut(s) | 276, 364, 970 |
| BsrBI | CCGCTC | 2 cut(s) | 283, 706 |
| BsrDI | GCAATG | 1 cut(s) | 312 |
| BsrFI | RCCGGY | 2 cut(s) | 203, 1078 |
| BsrI | ACTGG | 5 cut(s) | 100, 113, 164, 305, 955 |
| BssAI | RCCGGY | 2 cut(s) | 203, 1078 |
| BssECI | CCNNGG | 3 cut(s) | 768, 921, 960 |
| BssMI | GATC | 5 cut(s) | 190, 780, 910, 916, 1045 |
| BssSI | CACGAG | 1 cut(s) | 581 |
| BssT1I | CCWWGG | 1 cut(s) | 768 |
| Bst2BI | CACGAG | 1 cut(s) | 581 |
| Bst2UI | CCWGG | 4 cut(s) | 49, 215, 593, 882 |
| Bst4CI | ACNGT | 2 cut(s) | 8, 526 |
| Bst6I | CTCTTC | 2 cut(s) | 593, 821 |
| BstBI | TTCGAA | 1 cut(s) | 602 |
| BstDEI | CTNAG | 5 cut(s) | 146, 273, 672, 969, 1068 |
| BstDSI | CCRYGG | 1 cut(s) | 921 |
| BstF5I | GGATG | 1 cut(s) | 673 |
| BstFNI | CGCG | 1 cut(s) | 428 |
| BstH2I | RGCGCY | 3 cut(s) | 153, 268, 1068 |
| BstHHI | GCGC | 5 cut(s) | 152, 267, 891, 1036, 1067 |
| BstKTI | GATC | 5 cut(s) | 193, 783, 913, 919, 1048 |
| BstMAI | GTCTC | 3 cut(s) | 276, 364, 970 |
| BstMBI | GATC | 5 cut(s) | 190, 780, 910, 916, 1045 |
| BstMCI | CGRYCG | 1 cut(s) | 1001 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 53, 127, 224, 289, 628, 637, 754, 886 |
| BstNI | CCWGG | 4 cut(s) | 49, 215, 593, 882 |
| BstNSI | RCATGY | 1 cut(s) | 40 |
| BstSCI | CCNGG | 5 cut(s) | 47, 213, 591, 880, 995 |
| BstSFI | CTRYAG | 2 cut(s) | 530, 650 |
| BstSLI | GKGCMC | 3 cut(s) | 255, 294, 384 |
| BstUI | CGCG | 1 cut(s) | 428 |
| BstV1I | GCAGC | 4 cut(s) | 247, 619, 832, 973 |
| BstV2I | GAAGAC | 1 cut(s) | 305 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 982 |
| BstZI | CGGCCG | 1 cut(s) | 998 |
| BsuRI | GGCC | 7 cut(s) | 343, 382, 561, 767, 929, 974, 1000 |
| BtgI | CCRYGG | 1 cut(s) | 921 |
| BtsCI | GGATG | 1 cut(s) | 673 |
| BtsI | GCAGTG | 1 cut(s) | 877 |
| BtsIMutI | CAGTG | 2 cut(s) | 120, 877 |
| CaiI | CAGNNNCTG | 1 cut(s) | 631 |
| CciI | TCATGA | 2 cut(s) | 913, 1014 |
| CfoI | GCGC | 5 cut(s) | 152, 267, 891, 1036, 1067 |
| Cfr10I | RCCGGY | 2 cut(s) | 203, 1078 |
| Cfr13I | GGNCC | 4 cut(s) | 380, 381, 1003, 1008 |
| CpoI | CGGWCCG | 1 cut(s) | 1003 |
| Csp6I | GTAC | 3 cut(s) | 40, 430, 993 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 69, 104 |
| CspI | CGGWCCG | 1 cut(s) | 1003 |
| CviAII | CATG | 6 cut(s) | 37, 363, 914, 944, 1015, 1037 |
| CviQI | GTAC | 3 cut(s) | 40, 430, 993 |
| DdeI | CTNAG | 5 cut(s) | 146, 273, 672, 969, 1068 |
| DpnI | GATC | 5 cut(s) | 192, 782, 912, 918, 1047 |
| DpnII | GATC | 5 cut(s) | 190, 780, 910, 916, 1045 |
| EaeI | YGGCCR | 3 cut(s) | 559, 765, 998 |
| EagI | CGGCCG | 1 cut(s) | 998 |
| Eam1104I | CTCTTC | 2 cut(s) | 593, 821 |
| EarI | CTCTTC | 2 cut(s) | 593, 821 |
| EciI | GGCGGA | 1 cut(s) | 680 |
| Ecl136II | GAGCTC | 2 cut(s) | 586, 640 |
| EclXI | CGGCCG | 1 cut(s) | 998 |
| Eco130I | CCWWGG | 1 cut(s) | 768 |
| Eco147I | AGGCCT | 2 cut(s) | 343, 929 |
| Eco24I | GRGCYC | 3 cut(s) | 384, 588, 642 |
| Eco31I | GGTCTC | 3 cut(s) | 276, 364, 970 |
| Eco47I | GGWCC | 2 cut(s) | 1003, 1008 |
| Eco52I | CGGCCG | 1 cut(s) | 998 |
| Eco53kI | GAGCTC | 2 cut(s) | 586, 640 |
| Eco57I | CTGAAG | 1 cut(s) | 776 |
| EcoICRI | GAGCTC | 2 cut(s) | 586, 640 |
| EcoO109I | RGGNCCY | 1 cut(s) | 380 |
| EcoRII | CCWGG | 4 cut(s) | 47, 213, 591, 880 |
| EcoT14I | CCWWGG | 1 cut(s) | 768 |
| EcoT38I | GRGCYC | 3 cut(s) | 384, 588, 642 |
| ErhI | CCWWGG | 1 cut(s) | 768 |
| FaeI | CATG | 6 cut(s) | 40, 366, 917, 947, 1018, 1040 |
| FatI | CATG | 6 cut(s) | 36, 362, 913, 943, 1014, 1036 |
| FauI | CCCGC | 5 cut(s) | 262, 276, 310, 391, 1035 |
| FauNDI | CATATG | 1 cut(s) | 1059 |
| FbaI | TGATCA | 2 cut(s) | 190, 910 |
| Fnu4HI | GCNGC | 9 cut(s) | 45, 131, 236, 329, 426, 608, 623, 846, 987 |
| FokI | GGATG | 1 cut(s) | 680 |
| FriOI | GRGCYC | 3 cut(s) | 384, 588, 642 |
| Fsp4HI | GCNGC | 9 cut(s) | 45, 131, 236, 329, 426, 608, 623, 846, 987 |
| FspBI | CTAG | 1 cut(s) | 261 |
| FspI | TGCGCA | 1 cut(s) | 1035 |
| GlaI | GCGC | 5 cut(s) | 151, 266, 890, 1035, 1066 |
| GluI | GCNGC | 9 cut(s) | 45, 131, 236, 329, 426, 608, 623, 846, 987 |
| GsaI | CCCAGC | 3 cut(s) | 64, 491, 853 |
| GsuI | CTGGAG | 4 cut(s) | 198, 653, 713, 875 |
| HaeII | RGCGCY | 3 cut(s) | 153, 268, 1068 |
| HaeIII | GGCC | 7 cut(s) | 343, 382, 561, 767, 929, 974, 1000 |
| HapII | CCGG | 6 cut(s) | 204, 894, 997, 1001, 1006, 1079 |
| HhaI | GCGC | 5 cut(s) | 152, 267, 891, 1036, 1067 |
| Hin1II | CATG | 6 cut(s) | 40, 366, 917, 947, 1018, 1040 |
| Hin6I | GCGC | 5 cut(s) | 150, 265, 889, 1034, 1065 |
| HinP1I | GCGC | 5 cut(s) | 150, 265, 889, 1034, 1065 |
| HinfI | GANTC | 5 cut(s) | 76, 416, 492, 800, 940 |
| HpaII | CCGG | 6 cut(s) | 204, 894, 997, 1001, 1006, 1079 |
| HphI | GGTGA | 5 cut(s) | 85, 106, 200, 340, 835 |
| Hpy188I | TCNGA | 6 cut(s) | 436, 444, 795, 961, 1045, 1050 |
| Hpy188III | TCNNGA | 4 cut(s) | 29, 691, 914, 1015 |
| Hpy99I | CGWCG | 4 cut(s) | 544, 575, 692, 821 |
| HpyCH4III | ACNGT | 2 cut(s) | 8, 526 |
| HpyCH4IV | ACGT | 1 cut(s) | 86 |
| HpyCH4V | TGCA | 4 cut(s) | 235, 400, 580, 652 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 53, 127, 224, 289, 628, 637, 754, 886 |
| HpyF3I | CTNAG | 5 cut(s) | 146, 273, 672, 969, 1068 |
| HpySE526I | ACGT | 1 cut(s) | 86 |
| Hsp92II | CATG | 6 cut(s) | 40, 366, 917, 947, 1018, 1040 |
| HspAI | GCGC | 5 cut(s) | 150, 265, 889, 1034, 1065 |
| KroI | GCCGGC | 1 cut(s) | 1078 |
| KroNI | GCCGGC | 1 cut(s) | 1080 |
| Ksp22I | TGATCA | 2 cut(s) | 190, 910 |
| Kzo9I | GATC | 5 cut(s) | 190, 780, 910, 916, 1045 |
| LguI | GCTCTTC | 1 cut(s) | 593 |
| LmnI | GCTCC | 8 cut(s) | 179, 210, 280, 325, 637, 732, 867, 896 |
| Lsp1109I | GCAGC | 4 cut(s) | 247, 619, 832, 973 |
| LweI | GCATC | 1 cut(s) | 658 |
| MaeI | CTAG | 1 cut(s) | 261 |
| MaeII | ACGT | 1 cut(s) | 86 |
| MaeIII | GTNAC | 3 cut(s) | 8, 307, 346 |
| MalI | GATC | 5 cut(s) | 192, 782, 912, 918, 1047 |
| MbiI | CCGCTC | 2 cut(s) | 283, 706 |
| MboI | GATC | 5 cut(s) | 190, 780, 910, 916, 1045 |
| MboII | GAAGA | 4 cut(s) | 310, 580, 782, 838 |
| MhlI | GDGCHC | 7 cut(s) | 123, 255, 294, 384, 588, 642, 729 |
| MlsI | TGGCCA | 2 cut(s) | 561, 767 |
| MluCI | AATT | 1 cut(s) | 437 |
| MluNI | TGGCCA | 2 cut(s) | 561, 767 |
| MlyI | GAGTC | 3 cut(s) | 410, 794, 934 |
| MmeI | TCCRAC | 1 cut(s) | 303 |
| Mox20I | TGGCCA | 2 cut(s) | 561, 767 |
| MroNI | GCCGGC | 1 cut(s) | 1078 |
| MscI | TGGCCA | 2 cut(s) | 561, 767 |
| MseI | TTAA | 2 cut(s) | 125, 774 |
| MslI | CAYNNNNRTG | 1 cut(s) | 722 |
| Msp20I | TGGCCA | 2 cut(s) | 561, 767 |
| MspA1I | CMGCKG | 6 cut(s) | 238, 353, 498, 676, 748, 853 |
| MspI | CCGG | 6 cut(s) | 204, 894, 997, 1001, 1006, 1079 |
| MspR9I | CCNGG | 5 cut(s) | 49, 215, 593, 882, 997 |
| MvaI | CCWGG | 4 cut(s) | 49, 215, 593, 882 |
| MvnI | CGCG | 1 cut(s) | 428 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 53, 127, 224, 289, 628, 637, 754, 886 |
| NaeI | GCCGGC | 1 cut(s) | 1080 |
| NciI | CCSGG | 1 cut(s) | 997 |
| NdeI | CATATG | 1 cut(s) | 1059 |
| NdeII | GATC | 5 cut(s) | 190, 780, 910, 916, 1045 |
| NgoMIV | GCCGGC | 1 cut(s) | 1078 |
| NlaIII | CATG | 6 cut(s) | 40, 366, 917, 947, 1018, 1040 |
| NlaIV | GGNNCC | 7 cut(s) | 212, 291, 327, 381, 382, 511, 1042 |
| NmeAIII | GCCGAG | 1 cut(s) | 530 |
| NmuCI | GTSAC | 2 cut(s) | 8, 346 |
| NsbI | TGCGCA | 1 cut(s) | 1035 |
| NspI | RCATGY | 1 cut(s) | 40 |
| NspV | TTCGAA | 1 cut(s) | 602 |
| PagI | TCATGA | 2 cut(s) | 913, 1014 |
| PceI | AGGCCT | 2 cut(s) | 343, 929 |
| PciSI | GCTCTTC | 1 cut(s) | 593 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 425, 579 |
| PdiI | GCCGGC | 1 cut(s) | 1080 |
| PfeI | GAWTC | 2 cut(s) | 76, 492 |
| PkrI | GCNGC | 9 cut(s) | 46, 132, 237, 330, 427, 609, 624, 847, 988 |
| PleI | GAGTC | 3 cut(s) | 410, 794, 934 |
| PpsI | GAGTC | 3 cut(s) | 410, 794, 934 |
| Psp124BI | GAGCTC | 2 cut(s) | 588, 642 |
| Psp6I | CCWGG | 4 cut(s) | 47, 213, 591, 880 |
| PspFI | CCCAGC | 3 cut(s) | 60, 487, 849 |
| PspGI | CCWGG | 4 cut(s) | 47, 213, 591, 880 |
| PspN4I | GGNNCC | 7 cut(s) | 212, 291, 327, 381, 382, 511, 1042 |
| PspOMI | GGGCCC | 1 cut(s) | 380 |
| PspPI | GGNCC | 4 cut(s) | 380, 381, 1003, 1008 |
| PstI | CTGCAG | 1 cut(s) | 654 |
| PstNI | CAGNNNCTG | 1 cut(s) | 631 |
| PvuII | CAGCTG | 3 cut(s) | 676, 748, 853 |
| RsaI | GTAC | 3 cut(s) | 41, 431, 994 |
| RsaNI | GTAC | 3 cut(s) | 40, 430, 993 |
| RseI | CAYNNNNRTG | 1 cut(s) | 722 |
| Rsr2I | CGGWCCG | 1 cut(s) | 1003 |
| RsrII | CGGWCCG | 1 cut(s) | 1003 |
| SacI | GAGCTC | 2 cut(s) | 588, 642 |
| SapI | GCTCTTC | 1 cut(s) | 593 |
| SaqAI | TTAA | 2 cut(s) | 125, 774 |
| SatI | GCNGC | 9 cut(s) | 45, 131, 236, 329, 426, 608, 623, 846, 987 |
| Sau3AI | GATC | 5 cut(s) | 190, 780, 910, 916, 1045 |
| Sau96I | GGNCC | 4 cut(s) | 380, 381, 1003, 1008 |
| SbfI | CCTGCAGG | 1 cut(s) | 654 |
| SchI | GAGTC | 3 cut(s) | 410, 794, 934 |
| ScrFI | CCNGG | 5 cut(s) | 49, 215, 593, 882, 997 |
| SdaI | CCTGCAGG | 1 cut(s) | 654 |
| SduI | GDGCHC | 7 cut(s) | 123, 255, 294, 384, 588, 642, 729 |
| SfaNI | GCATC | 1 cut(s) | 658 |
| SfcI | CTRYAG | 2 cut(s) | 530, 650 |
| SfuI | TTCGAA | 1 cut(s) | 602 |
| SinI | GGWCC | 2 cut(s) | 1003, 1008 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 722 |
| SmlI | CTYRAG | 3 cut(s) | 29, 611, 701 |
| SmoI | CTYRAG | 3 cut(s) | 29, 611, 701 |
| Sse8387I | CCTGCAGG | 1 cut(s) | 654 |
| Sse9I | AATT | 1 cut(s) | 437 |
| SseBI | AGGCCT | 2 cut(s) | 343, 929 |
| SspMI | CTAG | 1 cut(s) | 261 |
| SstI | GAGCTC | 2 cut(s) | 588, 642 |
| StuI | AGGCCT | 2 cut(s) | 343, 929 |
| StyD4I | CCNGG | 5 cut(s) | 47, 213, 591, 880, 995 |
| StyI | CCWWGG | 1 cut(s) | 768 |
| TaaI | ACNGT | 2 cut(s) | 8, 526 |
| TaiI | ACGT | 1 cut(s) | 89 |
| TaqI | TCGA | 6 cut(s) | 221, 602, 642, 690, 783, 819 |
| TasI | AATT | 1 cut(s) | 437 |
| TauI | GCSGC | 5 cut(s) | 47, 133, 331, 428, 625 |
| TfiI | GAWTC | 2 cut(s) | 76, 492 |
| Tru1I | TTAA | 2 cut(s) | 125, 774 |
| Tru9I | TTAA | 2 cut(s) | 125, 774 |
| TscAI | CASTG | 2 cut(s) | 120, 877 |
| TseFI | GTSAC | 2 cut(s) | 8, 346 |
| TseI | GCWGC | 4 cut(s) | 235, 607, 845, 986 |
| Tsp45I | GTSAC | 2 cut(s) | 8, 346 |
| TspGWI | ACGGA | 3 cut(s) | 559, 805, 952 |
| TspRI | CASTG | 2 cut(s) | 120, 877 |
| VpaK11BI | GGWCC | 2 cut(s) | 1003, 1008 |
| XapI | RAATTY | 1 cut(s) | 437 |
| XceI | RCATGY | 1 cut(s) | 40 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 319 |
| XspI | CTAG | 1 cut(s) | 261 |