Cytosolic purine
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 1816 |
| AatII | GACGTC | 1 cut(s) | 1545 |
| Acc36I | ACCTGC | 1 cut(s) | 1307 |
| Acc65I | GGTACC | 2 cut(s) | 1748, 2078 |
| AccB1I | GGYRCC | 8 cut(s) | 335, 451, 664, 1204, 1748, 1865, 1955, 2078 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 159, 469 |
| AccBSI | CCGCTC | 4 cut(s) | 952, 1267, 1507, 1636 |
| AccI | GTMKAC | 2 cut(s) | 345, 1150 |
| AccII | CGCG | 7 cut(s) | 62, 187, 237, 1406, 1538, 1573, 2107 |
| AclWI | GGATC | 1 cut(s) | 791 |
| AcoI | YGGCCR | 5 cut(s) | 531, 961, 1515, 1563, 1758 |
| AcsI | RAATTY | 2 cut(s) | 479, 1449 |
| AcuI | CTGAAG | 3 cut(s) | 1339, 1874, 2172 |
| AcvI | CACGTG | 1 cut(s) | 2042 |
| AcyI | GRCGYC | 6 cut(s) | 665, 1205, 1409, 1542, 1817, 1866 |
| AfaI | GTAC | 3 cut(s) | 611, 1750, 2080 |
| AfeI | AGCGCT | 1 cut(s) | 928 |
| AflIII | ACRYGT | 1 cut(s) | 513 |
| AgsI | TTSAA | 5 cut(s) | 649, 1180, 1454, 1742, 1780 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 697 |
| AjnI | CCWGG | 4 cut(s) | 38, 468, 958, 1422 |
| AleI | CACNNNNGTG | 1 cut(s) | 969 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1262, 1294 |
| Alw21I | GWGCWC | 1 cut(s) | 200 |
| Alw26I | GTCTC | 3 cut(s) | 1603, 1922, 2081 |
| AlwI | GGATC | 1 cut(s) | 791 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1423 |
| Aor51HI | AGCGCT | 1 cut(s) | 928 |
| ApaI | GGGCCC | 2 cut(s) | 1147, 1834 |
| ApoI | RAATTY | 2 cut(s) | 479, 1449 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 588 |
| Asp718I | GGTACC | 2 cut(s) | 1748, 2078 |
| AspLEI | GCGC | 8 cut(s) | 62, 237, 621, 667, 929, 1207, 1868, 1985 |
| AsuC2I | CCSGG | 4 cut(s) | 411, 559, 1828, 2069 |
| AsuHPI | GGTGA | 8 cut(s) | 221, 878, 1045, 1048, 1054, 1147, 1274, 1730 |
| AsuNHI | GCTAGC | 1 cut(s) | 266 |
| AvaII | GGWCC | 5 cut(s) | 569, 714, 1457, 2001, 2112 |
| AxyI | CCTNAGG | 1 cut(s) | 1733 |
| BaeGI | GKGCMC | 4 cut(s) | 1147, 1834, 1960, 2064 |
| BalI | TGGCCA | 4 cut(s) | 533, 963, 1517, 1565 |
| BanI | GGYRCC | 8 cut(s) | 335, 451, 664, 1204, 1748, 1865, 1955, 2078 |
| BanII | GRGCYC | 4 cut(s) | 200, 416, 1147, 1834 |
| BbrPI | CACGTG | 1 cut(s) | 2042 |
| Bbv12I | GWGCWC | 1 cut(s) | 200 |
| BceAI | ACGGC | 5 cut(s) | 326, 1196, 1310, 1350, 1883 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 325, 359 |
| BciT130I | CCWGG | 4 cut(s) | 40, 470, 960, 1424 |
| BciVI | GTATCC | 1 cut(s) | 1928 |
| BcnI | CCSGG | 4 cut(s) | 411, 559, 1828, 2069 |
| BcoDI | GTCTC | 3 cut(s) | 1603, 1922, 2081 |
| BfaI | CTAG | 4 cut(s) | 131, 201, 231, 267 |
| BfmI | CTRYAG | 3 cut(s) | 146, 930, 1628 |
| BfoI | RGCGCY | 5 cut(s) | 622, 668, 930, 1208, 1869 |
| BfuAI | ACCTGC | 1 cut(s) | 1307 |
| BfuI | GTATCC | 1 cut(s) | 1928 |
| Bme1390I | CCNGG | 8 cut(s) | 40, 411, 470, 559, 960, 1424, 1828, 2069 |
| Bme18I | GGWCC | 5 cut(s) | 569, 714, 1457, 2001, 2112 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 697 |
| BmrFI | CCNGG | 8 cut(s) | 40, 411, 470, 559, 960, 1424, 1828, 2069 |
| BmsI | GCATC | 2 cut(s) | 945, 1895 |
| BmtI | GCTAGC | 1 cut(s) | 270 |
| BoxI | GACNNNNGTC | 1 cut(s) | 1049 |
| BplI | GAGNNNNNCTC | 6 cut(s) | 426, 458, 1211, 1243, 1736, 1768 |
| BpmI | CTGGAG | 2 cut(s) | 1733, 1971 |
| BpuEI | CTTGAG | 1 cut(s) | 885 |
| BpuMI | CCSGG | 4 cut(s) | 411, 559, 1828, 2069 |
| Bsa29I | ATCGAT | 1 cut(s) | 2132 |
| BsaAI | YACGTR | 1 cut(s) | 2042 |
| BsaHI | GRCGYC | 6 cut(s) | 665, 1205, 1409, 1542, 1817, 1866 |
| BsaI | GGTCTC | 1 cut(s) | 2081 |
| BsaWI | WCCGGW | 2 cut(s) | 402, 829 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1262, 1292 |
| Bse118I | RCCGGY | 6 cut(s) | 654, 908, 997, 1033, 1089, 1906 |
| Bse1I | ACTGG | 4 cut(s) | 710, 817, 853, 1497 |
| Bse21I | CCTNAGG | 1 cut(s) | 1733 |
| BseBI | CCWGG | 4 cut(s) | 40, 470, 960, 1424 |
| BseCI | ATCGAT | 1 cut(s) | 2132 |
| BseGI | GGATG | 8 cut(s) | 153, 337, 369, 877, 960, 1886, 1987, 2080 |
| BseMII | CTCAG | 6 cut(s) | 300, 1453, 1724, 1803, 1902, 1977 |
| BseNI | ACTGG | 4 cut(s) | 710, 817, 853, 1497 |
| BseRI | GAGGAG | 1 cut(s) | 1139 |
| BseSI | GKGCMC | 4 cut(s) | 1147, 1834, 1960, 2064 |
| BseX3I | CGGCCG | 1 cut(s) | 1758 |
| BseYI | CCCAGC | 6 cut(s) | 278, 1058, 1297, 1890, 2004, 2093 |
| BsgI | GTGCAG | 3 cut(s) | 908, 1373, 1691 |
| Bsh1236I | CGCG | 7 cut(s) | 62, 187, 237, 1406, 1538, 1573, 2107 |
| Bsh1285I | CGRYCG | 3 cut(s) | 1761, 1787, 2132 |
| BshNI | GGYRCC | 8 cut(s) | 335, 451, 664, 1204, 1748, 1865, 1955, 2078 |
| BshVI | ATCGAT | 1 cut(s) | 2132 |
| BsiEI | CGRYCG | 3 cut(s) | 1761, 1787, 2132 |
| BsiHKAI | GWGCWC | 1 cut(s) | 200 |
| BslFI | GGGAC | 9 cut(s) | 582, 704, 727, 841, 910, 1398, 1443, 1589, 1987 |
| BsmAI | GTCTC | 3 cut(s) | 1603, 1922, 2081 |
| BsmBI | CGTCTC | 1 cut(s) | 1603 |
| BsmFI | GGGAC | 9 cut(s) | 582, 704, 727, 841, 910, 1398, 1443, 1589, 1987 |
| BsmI | GAATGC | 1 cut(s) | 310 |
| Bso31I | GGTCTC | 1 cut(s) | 2081 |
| Bsp120I | GGGCCC | 2 cut(s) | 1143, 1830 |
| Bsp1286I | GDGCHC | 6 cut(s) | 200, 416, 1147, 1834, 1960, 2064 |
| Bsp1407I | TGTACA | 1 cut(s) | 609 |
| Bsp143I | GATC | 7 cut(s) | 54, 675, 783, 1137, 1617, 2116, 2129 |
| BspCNI | CTCAG | 6 cut(s) | 301, 1452, 1725, 1804, 1903, 1976 |
| BspDI | ATCGAT | 1 cut(s) | 2132 |
| BspFNI | CGCG | 7 cut(s) | 62, 187, 237, 1406, 1538, 1573, 2107 |
| BspHI | TCATGA | 1 cut(s) | 1251 |
| BspMAI | CTGCAG | 2 cut(s) | 934, 1632 |
| BspMI | ACCTGC | 1 cut(s) | 1307 |
| BspOI | GCTAGC | 1 cut(s) | 270 |
| BspPI | GGATC | 1 cut(s) | 791 |
| BspT107I | GGYRCC | 8 cut(s) | 335, 451, 664, 1204, 1748, 1865, 1955, 2078 |
| BspTNI | GGTCTC | 1 cut(s) | 2081 |
| BsrBI | CCGCTC | 4 cut(s) | 952, 1267, 1507, 1636 |
| BsrFI | RCCGGY | 6 cut(s) | 654, 908, 997, 1033, 1089, 1906 |
| BsrGI | TGTACA | 1 cut(s) | 609 |
| BsrI | ACTGG | 4 cut(s) | 710, 817, 853, 1497 |
| BssAI | RCCGGY | 6 cut(s) | 654, 908, 997, 1033, 1089, 1906 |
| BssMI | GATC | 7 cut(s) | 54, 675, 783, 1137, 1617, 2116, 2129 |
| BssNI | GRCGYC | 6 cut(s) | 665, 1205, 1409, 1542, 1817, 1866 |
| BssT1I | CCWWGG | 3 cut(s) | 430, 1518, 1647 |
| Bst2UI | CCWGG | 4 cut(s) | 40, 470, 960, 1424 |
| Bst4CI | ACNGT | 3 cut(s) | 577, 1015, 1186 |
| Bst6I | CTCTTC | 2 cut(s) | 1110, 1737 |
| BstACI | GRCGYC | 6 cut(s) | 665, 1205, 1409, 1542, 1817, 1866 |
| BstAUI | TGTACA | 1 cut(s) | 609 |
| BstBAI | YACGTR | 1 cut(s) | 2042 |
| BstDEI | CTNAG | 7 cut(s) | 309, 686, 1439, 1733, 1812, 1911, 1963 |
| BstDSI | CCRYGG | 1 cut(s) | 1332 |
| BstEII | GGTNACC | 2 cut(s) | 1051, 1723 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 1427, 1628 |
| BstF5I | GGATG | 8 cut(s) | 153, 337, 369, 877, 960, 1886, 1987, 2080 |
| BstFNI | CGCG | 7 cut(s) | 62, 187, 237, 1406, 1538, 1573, 2107 |
| BstH2I | RGCGCY | 5 cut(s) | 622, 668, 930, 1208, 1869 |
| BstHHI | GCGC | 8 cut(s) | 62, 237, 621, 667, 929, 1207, 1868, 1985 |
| BstKTI | GATC | 7 cut(s) | 57, 678, 786, 1140, 1620, 2119, 2132 |
| BstMAI | GTCTC | 3 cut(s) | 1603, 1922, 2081 |
| BstMBI | GATC | 7 cut(s) | 54, 675, 783, 1137, 1617, 2116, 2129 |
| BstMCI | CGRYCG | 3 cut(s) | 1761, 1787, 2132 |
| BstNI | CCWGG | 4 cut(s) | 40, 470, 960, 1424 |
| BstNSI | RCATGY | 1 cut(s) | 517 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 1049 |
| BstPI | GGTNACC | 2 cut(s) | 1051, 1723 |
| BstSCI | CCNGG | 8 cut(s) | 38, 409, 468, 557, 958, 1422, 1826, 2067 |
| BstSFI | CTRYAG | 3 cut(s) | 146, 930, 1628 |
| BstSLI | GKGCMC | 4 cut(s) | 1147, 1834, 1960, 2064 |
| BstUI | CGCG | 7 cut(s) | 62, 187, 237, 1406, 1538, 1573, 2107 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 971 |
| BstZI | CGGCCG | 1 cut(s) | 1758 |
| Bsu15I | ATCGAT | 1 cut(s) | 2132 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1733 |
| BsuI | GTATCC | 1 cut(s) | 1928 |
| BsuTUI | ATCGAT | 1 cut(s) | 2132 |
| BtgI | CCRYGG | 1 cut(s) | 1332 |
| BtgZI | GCGATG | 2 cut(s) | 252, 1820 |
| BtsCI | GGATG | 8 cut(s) | 153, 337, 369, 877, 960, 1886, 1987, 2080 |
| BtsI | GCAGTG | 2 cut(s) | 34, 116 |
| BtsIMutI | CAGTG | 4 cut(s) | 34, 116, 1011, 1191 |
| BveI | ACCTGC | 1 cut(s) | 1307 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1423 |
| CciI | TCATGA | 1 cut(s) | 1251 |
| CciNI | GCGGCCGC | 1 cut(s) | 1758 |
| CfoI | GCGC | 8 cut(s) | 62, 237, 621, 667, 929, 1207, 1868, 1985 |
| Cfr10I | RCCGGY | 6 cut(s) | 654, 908, 997, 1033, 1089, 1906 |
| ClaI | ATCGAT | 1 cut(s) | 2132 |
| CseI | GACGC | 6 cut(s) | 80, 176, 712, 1398, 1585, 1806 |
| Csp6I | GTAC | 3 cut(s) | 610, 1749, 2079 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1321, 1356 |
| CviAII | CATG | 6 cut(s) | 104, 514, 535, 613, 749, 1252 |
| CviQI | GTAC | 3 cut(s) | 610, 1749, 2079 |
| DdeI | CTNAG | 7 cut(s) | 309, 686, 1439, 1733, 1812, 1911, 1963 |
| DinI | GGCGCC | 3 cut(s) | 666, 1206, 1867 |
| DpnI | GATC | 7 cut(s) | 56, 677, 785, 1139, 1619, 2118, 2131 |
| DpnII | GATC | 7 cut(s) | 54, 675, 783, 1137, 1617, 2116, 2129 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 1816 |
| DriI | GACNNNNNGTC | 1 cut(s) | 697 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 1816 |
| EaeI | YGGCCR | 5 cut(s) | 531, 961, 1515, 1563, 1758 |
| EagI | CGGCCG | 1 cut(s) | 1758 |
| Eam1104I | CTCTTC | 2 cut(s) | 1110, 1737 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 697 |
| EarI | CTCTTC | 2 cut(s) | 1110, 1737 |
| Ecl136II | GAGCTC | 1 cut(s) | 198 |
| EclXI | CGGCCG | 1 cut(s) | 1758 |
| Eco130I | CCWWGG | 3 cut(s) | 430, 1518, 1647 |
| Eco24I | GRGCYC | 4 cut(s) | 200, 416, 1147, 1834 |
| Eco31I | GGTCTC | 1 cut(s) | 2081 |
| Eco47I | GGWCC | 5 cut(s) | 569, 714, 1457, 2001, 2112 |
| Eco47III | AGCGCT | 1 cut(s) | 928 |
| Eco52I | CGGCCG | 1 cut(s) | 1758 |
| Eco53kI | GAGCTC | 1 cut(s) | 198 |
| Eco57I | CTGAAG | 3 cut(s) | 1339, 1874, 2172 |
| Eco72I | CACGTG | 1 cut(s) | 2042 |
| Eco81I | CCTNAGG | 1 cut(s) | 1733 |
| Eco91I | GGTNACC | 2 cut(s) | 1051, 1723 |
| EcoICRI | GAGCTC | 1 cut(s) | 198 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 1427, 1628 |
| EcoO109I | RGGNCCY | 6 cut(s) | 569, 714, 1143, 1457, 1830, 2001 |
| EcoO65I | GGTNACC | 2 cut(s) | 1051, 1723 |
| EcoRII | CCWGG | 4 cut(s) | 38, 468, 958, 1422 |
| EcoT14I | CCWWGG | 3 cut(s) | 430, 1518, 1647 |
| EcoT38I | GRGCYC | 4 cut(s) | 200, 416, 1147, 1834 |
| EgeI | GGCGCC | 3 cut(s) | 666, 1206, 1867 |
| EheI | GGCGCC | 3 cut(s) | 666, 1206, 1867 |
| ErhI | CCWWGG | 3 cut(s) | 430, 1518, 1647 |
| Esp3I | CGTCTC | 1 cut(s) | 1603 |
| FaeI | CATG | 6 cut(s) | 107, 517, 538, 616, 752, 1255 |
| FaqI | GGGAC | 9 cut(s) | 582, 704, 727, 841, 910, 1398, 1443, 1589, 1987 |
| FatI | CATG | 6 cut(s) | 103, 513, 534, 612, 748, 1251 |
| FblI | GTMKAC | 2 cut(s) | 345, 1150 |
| FokI | GGATG | 8 cut(s) | 140, 344, 376, 884, 967, 1873, 1974, 2087 |
| FriOI | GRGCYC | 4 cut(s) | 200, 416, 1147, 1834 |
| FspBI | CTAG | 4 cut(s) | 131, 201, 231, 267 |
| GlaI | GCGC | 8 cut(s) | 61, 236, 620, 666, 928, 1206, 1867, 1984 |
| GsaI | CCCAGC | 6 cut(s) | 282, 1062, 1301, 1894, 2008, 2097 |
| GsuI | CTGGAG | 2 cut(s) | 1733, 1971 |
| HaeII | RGCGCY | 5 cut(s) | 622, 668, 930, 1208, 1869 |
| HgaI | GACGC | 6 cut(s) | 80, 176, 712, 1398, 1585, 1806 |
| HhaI | GCGC | 8 cut(s) | 62, 237, 621, 667, 929, 1207, 1868, 1985 |
| Hin1I | GRCGYC | 6 cut(s) | 665, 1205, 1409, 1542, 1817, 1866 |
| Hin1II | CATG | 6 cut(s) | 107, 517, 538, 616, 752, 1255 |
| Hin6I | GCGC | 8 cut(s) | 60, 235, 619, 665, 927, 1205, 1866, 1983 |
| HinP1I | GCGC | 8 cut(s) | 60, 235, 619, 665, 927, 1205, 1866, 1983 |
| HincII | GTYRAC | 3 cut(s) | 346, 382, 1151 |
| HindII | GTYRAC | 3 cut(s) | 346, 382, 1151 |
| HindIII | AAGCTT | 1 cut(s) | 1658 |
| HpaI | GTTAAC | 1 cut(s) | 382 |
| HphI | GGTGA | 8 cut(s) | 221, 878, 1045, 1048, 1054, 1147, 1274, 1730 |
| Hpy166II | GTNNAC | 5 cut(s) | 346, 382, 610, 643, 1151 |
| Hpy188I | TCNGA | 7 cut(s) | 46, 331, 501, 793, 823, 2032, 2116 |
| Hpy188III | TCNNGA | 4 cut(s) | 191, 679, 1252, 2120 |
| Hpy8I | GTNNAC | 5 cut(s) | 346, 382, 610, 643, 1151 |
| Hpy99I | CGWCG | 6 cut(s) | 347, 350, 728, 1152, 1406, 1822 |
| HpyCH4III | ACNGT | 3 cut(s) | 577, 1015, 1186 |
| HpyCH4IV | ACGT | 5 cut(s) | 9, 398, 1542, 1560, 2041 |
| HpyCH4V | TGCA | 8 cut(s) | 107, 630, 889, 932, 994, 1390, 1630, 1672 |
| HpyF3I | CTNAG | 7 cut(s) | 309, 686, 1439, 1733, 1812, 1911, 1963 |
| HpySE526I | ACGT | 5 cut(s) | 9, 398, 1542, 1560, 2041 |
| Hsp92I | GRCGYC | 6 cut(s) | 665, 1205, 1409, 1542, 1817, 1866 |
| Hsp92II | CATG | 6 cut(s) | 107, 517, 538, 616, 752, 1255 |
| HspAI | GCGC | 8 cut(s) | 60, 235, 619, 665, 927, 1205, 1866, 1983 |
| KasI | GGCGCC | 3 cut(s) | 664, 1204, 1865 |
| KpnI | GGTACC | 2 cut(s) | 1752, 2082 |
| KroI | GCCGGC | 4 cut(s) | 654, 908, 1089, 1906 |
| KroNI | GCCGGC | 4 cut(s) | 656, 910, 1091, 1908 |
| KspAI | GTTAAC | 1 cut(s) | 382 |
| Kzo9I | GATC | 7 cut(s) | 54, 675, 783, 1137, 1617, 2116, 2129 |
| LmnI | GCTCC | 6 cut(s) | 167, 278, 949, 1177, 1609, 1633 |
| LweI | GCATC | 2 cut(s) | 945, 1895 |
| MaeI | CTAG | 4 cut(s) | 131, 201, 231, 267 |
| MaeII | ACGT | 5 cut(s) | 9, 398, 1542, 1560, 2041 |
| MaeIII | GTNAC | 7 cut(s) | 436, 1009, 1042, 1051, 1529, 1723, 2037 |
| MalI | GATC | 7 cut(s) | 56, 677, 785, 1139, 1619, 2118, 2131 |
| MbiI | CCGCTC | 4 cut(s) | 952, 1267, 1507, 1636 |
| MboI | GATC | 7 cut(s) | 54, 675, 783, 1137, 1617, 2116, 2129 |
| MboII | GAAGA | 8 cut(s) | 296, 299, 1127, 1168, 1754, 1867, 1870, 2171 |
| MfeI | CAATTG | 1 cut(s) | 1338 |
| MhlI | GDGCHC | 6 cut(s) | 200, 416, 1147, 1834, 1960, 2064 |
| MlsI | TGGCCA | 4 cut(s) | 533, 963, 1517, 1565 |
| MluCI | AATT | 3 cut(s) | 479, 1338, 1449 |
| MluNI | TGGCCA | 4 cut(s) | 533, 963, 1517, 1565 |
| Mly113I | GGCGCC | 3 cut(s) | 665, 1205, 1866 |
| MlyI | GAGTC | 7 cut(s) | 320, 686, 892, 1220, 1688, 2005, 2134 |
| MmeI | TCCRAC | 4 cut(s) | 771, 823, 1056, 1587 |
| Mox20I | TGGCCA | 4 cut(s) | 533, 963, 1517, 1565 |
| MroNI | GCCGGC | 4 cut(s) | 654, 908, 1089, 1906 |
| MroXI | GAANNNNTTC | 1 cut(s) | 588 |
| MscI | TGGCCA | 4 cut(s) | 533, 963, 1517, 1565 |
| MseI | TTAA | 2 cut(s) | 381, 1797 |
| MslI | CAYNNNNRTG | 3 cut(s) | 864, 969, 1847 |
| Msp20I | TGGCCA | 4 cut(s) | 533, 963, 1517, 1565 |
| MspR9I | CCNGG | 8 cut(s) | 40, 411, 470, 559, 960, 1424, 1828, 2069 |
| MunI | CAATTG | 1 cut(s) | 1338 |
| Mva1269I | GAATGC | 1 cut(s) | 310 |
| MvaI | CCWGG | 4 cut(s) | 40, 470, 960, 1424 |
| MvnI | CGCG | 7 cut(s) | 62, 187, 237, 1406, 1538, 1573, 2107 |
| NaeI | GCCGGC | 4 cut(s) | 656, 910, 1091, 1908 |
| NarI | GGCGCC | 3 cut(s) | 665, 1205, 1866 |
| NciI | CCSGG | 4 cut(s) | 411, 559, 1828, 2069 |
| NdeII | GATC | 7 cut(s) | 54, 675, 783, 1137, 1617, 2116, 2129 |
| NgoMIV | GCCGGC | 4 cut(s) | 654, 908, 1089, 1906 |
| NheI | GCTAGC | 1 cut(s) | 266 |
| NlaIII | CATG | 6 cut(s) | 107, 517, 538, 616, 752, 1255 |
| NmeAIII | GCCGAG | 6 cut(s) | 395, 647, 1135, 1261, 1340, 1733 |
| NmuCI | GTSAC | 6 cut(s) | 436, 1009, 1042, 1051, 1529, 2037 |
| NotI | GCGGCCGC | 1 cut(s) | 1758 |
| NspI | RCATGY | 1 cut(s) | 517 |
| OliI | CACNNNNGTG | 1 cut(s) | 969 |
| PagI | TCATGA | 1 cut(s) | 1251 |
| PciI | ACATGT | 1 cut(s) | 513 |
| PcsI | WCGNNNNNNNCGW | 3 cut(s) | 92, 184, 1398 |
| PctI | GAATGC | 1 cut(s) | 310 |
| PdiI | GCCGGC | 4 cut(s) | 656, 910, 1091, 1908 |
| PdmI | GAANNNNTTC | 1 cut(s) | 588 |
| PfeI | GAWTC | 4 cut(s) | 35, 83, 682, 1100 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 159, 469 |
| Ple19I | CGATCG | 1 cut(s) | 2132 |
| PleI | GAGTC | 7 cut(s) | 319, 686, 892, 1220, 1687, 2005, 2133 |
| PluTI | GGCGCC | 3 cut(s) | 668, 1208, 1869 |
| PmaCI | CACGTG | 1 cut(s) | 2042 |
| PmlI | CACGTG | 1 cut(s) | 2042 |
| PpsI | GAGTC | 7 cut(s) | 319, 686, 892, 1220, 1687, 2005, 2133 |
| Ppu21I | YACGTR | 1 cut(s) | 2042 |
| PpuMI | RGGWCCY | 4 cut(s) | 569, 714, 1457, 2001 |
| PscI | ACATGT | 1 cut(s) | 513 |
| PshAI | GACNNNNGTC | 1 cut(s) | 1049 |
| Psp124BI | GAGCTC | 1 cut(s) | 200 |
| Psp5II | RGGWCCY | 4 cut(s) | 569, 714, 1457, 2001 |
| Psp6I | CCWGG | 4 cut(s) | 38, 468, 958, 1422 |
| PspCI | CACGTG | 1 cut(s) | 2042 |
| PspEI | GGTNACC | 2 cut(s) | 1051, 1723 |
| PspFI | CCCAGC | 6 cut(s) | 278, 1058, 1297, 1890, 2004, 2093 |
| PspGI | CCWGG | 4 cut(s) | 38, 468, 958, 1422 |
| PspOMI | GGGCCC | 2 cut(s) | 1143, 1830 |
| PspPPI | RGGWCCY | 4 cut(s) | 569, 714, 1457, 2001 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 1232, 1264 |
| PstI | CTGCAG | 2 cut(s) | 934, 1632 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1423 |
| PvuI | CGATCG | 1 cut(s) | 2132 |
| PvuII | CAGCTG | 1 cut(s) | 935 |
| RsaI | GTAC | 3 cut(s) | 611, 1750, 2080 |
| RsaNI | GTAC | 3 cut(s) | 610, 1749, 2079 |
| RseI | CAYNNNNRTG | 3 cut(s) | 864, 969, 1847 |
| SacI | GAGCTC | 1 cut(s) | 200 |
| SalI | GTCGAC | 2 cut(s) | 344, 1149 |
| SaqAI | TTAA | 2 cut(s) | 381, 1797 |
| Sau3AI | GATC | 7 cut(s) | 54, 675, 783, 1137, 1617, 2116, 2129 |
| SchI | GAGTC | 7 cut(s) | 320, 686, 892, 1220, 1688, 2005, 2134 |
| ScrFI | CCNGG | 8 cut(s) | 40, 411, 470, 559, 960, 1424, 1828, 2069 |
| SduI | GDGCHC | 6 cut(s) | 200, 416, 1147, 1834, 1960, 2064 |
| SfaNI | GCATC | 2 cut(s) | 945, 1895 |
| SfcI | CTRYAG | 3 cut(s) | 146, 930, 1628 |
| SfoI | GGCGCC | 3 cut(s) | 666, 1206, 1867 |
| SgrAI | CRCCGGYG | 1 cut(s) | 1033 |
| SgrDI | CGTCGACG | 1 cut(s) | 344 |
| SinI | GGWCC | 5 cut(s) | 569, 714, 1457, 2001, 2112 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 864, 969, 1847 |
| SmlI | CTYRAG | 1 cut(s) | 900 |
| SmoI | CTYRAG | 1 cut(s) | 900 |
| Sse9I | AATT | 3 cut(s) | 479, 1338, 1449 |
| SspDI | GGCGCC | 3 cut(s) | 664, 1204, 1865 |
| SspMI | CTAG | 4 cut(s) | 131, 201, 231, 267 |
| SstI | GAGCTC | 1 cut(s) | 200 |
| StyD4I | CCNGG | 8 cut(s) | 38, 409, 468, 557, 958, 1422, 1826, 2067 |
| StyI | CCWWGG | 3 cut(s) | 430, 1518, 1647 |
| TaaI | ACNGT | 3 cut(s) | 577, 1015, 1186 |
| TaiI | ACGT | 5 cut(s) | 12, 401, 1545, 1563, 2044 |
| TaqII | GACCGA | 1 cut(s) | 1712 |
| TasI | AATT | 3 cut(s) | 479, 1338, 1449 |
| TatI | WGTACW | 1 cut(s) | 609 |
| TfiI | GAWTC | 4 cut(s) | 35, 83, 682, 1100 |
| Tru1I | TTAA | 2 cut(s) | 381, 1797 |
| Tru9I | TTAA | 2 cut(s) | 381, 1797 |
| TscAI | CASTG | 4 cut(s) | 34, 123, 1018, 1191 |
| TseFI | GTSAC | 6 cut(s) | 436, 1009, 1042, 1051, 1529, 2037 |
| Tsp45I | GTSAC | 6 cut(s) | 436, 1009, 1042, 1051, 1529, 2037 |
| TspDTI | ATGAA | 6 cut(s) | 380, 404, 551, 629, 1240, 1605 |
| TspGWI | ACGGA | 1 cut(s) | 84 |
| TspRI | CASTG | 4 cut(s) | 34, 123, 1018, 1191 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 159, 469 |
| VpaK11BI | GGWCC | 5 cut(s) | 569, 714, 1457, 2001, 2112 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 1427, 1628 |
| XapI | RAATTY | 2 cut(s) | 479, 1449 |
| XceI | RCATGY | 1 cut(s) | 517 |
| XmiI | GTMKAC | 2 cut(s) | 345, 1150 |
| XmnI | GAANNNNTTC | 1 cut(s) | 588 |
| XspI | CTAG | 4 cut(s) | 131, 201, 231, 267 |
| ZraI | GACGTC | 1 cut(s) | 1543 |