Putative gypsy type transposon
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 284 |
| AasI | GACNNNNNNGTC | 2 cut(s) | 1399, 2302 |
| Acc36I | ACCTGC | 2 cut(s) | 284, 957 |
| Acc65I | GGTACC | 1 cut(s) | 2381 |
| AccB1I | GGYRCC | 5 cut(s) | 463, 1504, 2129, 2165, 2381 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 481, 528 |
| AccBSI | CCGCTC | 5 cut(s) | 407, 1255, 1567, 1594, 1936 |
| AccI | GTMKAC | 4 cut(s) | 839, 945, 1450, 2145 |
| AccIII | TCCGGA | 1 cut(s) | 569 |
| AclWI | GGATC | 5 cut(s) | 472, 884, 1029, 1224, 1884 |
| AcoI | YGGCCR | 5 cut(s) | 543, 1206, 1236, 1863, 2026 |
| AcsI | RAATTY | 3 cut(s) | 14, 174, 491 |
| AcuI | CTGAAG | 2 cut(s) | 153, 1639 |
| AcvI | CACGTG | 1 cut(s) | 2345 |
| AcyI | GRCGYC | 6 cut(s) | 848, 1505, 1709, 1842, 2130, 2186 |
| AfaI | GTAC | 4 cut(s) | 623, 757, 2260, 2383 |
| AfeI | AGCGCT | 1 cut(s) | 1231 |
| AflIII | ACRYGT | 1 cut(s) | 2148 |
| AgsI | TTSAA | 6 cut(s) | 971, 1295, 2072, 2080, 2155, 2456 |
| AhdI | GACNNNNNGTC | 3 cut(s) | 709, 2203, 2397 |
| AjiI | CACGTC | 1 cut(s) | 2200 |
| AjnI | CCWGG | 1 cut(s) | 480 |
| AleI | CACNNNNGTG | 1 cut(s) | 1164 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1556, 1588 |
| Alw21I | GWGCWC | 1 cut(s) | 1740 |
| AlwI | GGATC | 5 cut(s) | 472, 884, 1029, 1224, 1884 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 481 |
| Ama87I | CYCGRG | 3 cut(s) | 2133, 2370, 2409 |
| Aor13HI | TCCGGA | 1 cut(s) | 569 |
| Aor51HI | AGCGCT | 1 cut(s) | 1231 |
| ApaI | GGGCCC | 1 cut(s) | 1447 |
| ApoI | RAATTY | 3 cut(s) | 14, 174, 491 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1261, 1293 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 600 |
| Asp718I | GGTACC | 1 cut(s) | 2381 |
| AsuC2I | CCSGG | 8 cut(s) | 351, 1097, 1213, 1240, 1723, 2222, 2371, 2372 |
| AsuHPI | GGTGA | 6 cut(s) | 370, 1102, 1147, 1151, 1178, 2030 |
| AvaI | CYCGRG | 3 cut(s) | 2133, 2370, 2409 |
| AvaII | GGWCC | 5 cut(s) | 725, 1277, 1350, 2304, 2415 |
| BaeGI | GKGCMC | 2 cut(s) | 468, 1447 |
| BalI | TGGCCA | 1 cut(s) | 545 |
| BanI | GGYRCC | 5 cut(s) | 463, 1504, 2129, 2165, 2381 |
| BanII | GRGCYC | 2 cut(s) | 1447, 1740 |
| BauI | CACGAG | 1 cut(s) | 425 |
| BbrPI | CACGTG | 1 cut(s) | 2345 |
| Bbv12I | GWGCWC | 1 cut(s) | 1740 |
| BccI | CCATC | 6 cut(s) | 266, 1012, 1132, 1166, 1590, 1874 |
| BciT130I | CCWGG | 1 cut(s) | 482 |
| BcnI | CCSGG | 8 cut(s) | 351, 1097, 1213, 1240, 1723, 2222, 2371, 2372 |
| BfaI | CTAG | 2 cut(s) | 617, 764 |
| BfmI | CTRYAG | 3 cut(s) | 740, 1928, 2253 |
| BfoI | RGCGCY | 7 cut(s) | 634, 680, 1233, 1376, 1390, 1508, 2133 |
| BfuAI | ACCTGC | 2 cut(s) | 284, 957 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 2057 |
| BlpI | GCTNAGC | 3 cut(s) | 36, 97, 157 |
| Bme1390I | CCNGG | 9 cut(s) | 351, 482, 1097, 1213, 1240, 1723, 2222, 2371, 2372 |
| Bme18I | GGWCC | 5 cut(s) | 725, 1277, 1350, 2304, 2415 |
| BmeRI | GACNNNNNGTC | 3 cut(s) | 709, 2203, 2397 |
| BmeT110I | CYCGRG | 3 cut(s) | 2133, 2370, 2409 |
| BmgBI | CACGTC | 1 cut(s) | 2200 |
| BmrFI | CCNGG | 9 cut(s) | 351, 482, 1097, 1213, 1240, 1723, 2222, 2371, 2372 |
| BmrI | ACTGGG | 2 cut(s) | 2323, 2391 |
| BmsI | GCATC | 3 cut(s) | 563, 1134, 1248 |
| BmuI | ACTGGG | 2 cut(s) | 2323, 2391 |
| BoxI | GACNNNNGTC | 1 cut(s) | 2234 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 377, 409 |
| BpmI | CTGGAG | 5 cut(s) | 458, 1397, 1745, 1901, 2378 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1739 |
| Bpu1102I | GCTNAGC | 3 cut(s) | 36, 97, 157 |
| BpuEI | CTTGAG | 1 cut(s) | 679 |
| BpuMI | CCSGG | 8 cut(s) | 351, 1097, 1213, 1240, 1723, 2222, 2371, 2372 |
| BsaAI | YACGTR | 2 cut(s) | 625, 2345 |
| BsaHI | GRCGYC | 6 cut(s) | 848, 1505, 1709, 1842, 2130, 2186 |
| BsaI | GGTCTC | 2 cut(s) | 1763, 2384 |
| BsaWI | WCCGGW | 3 cut(s) | 324, 569, 1129 |
| BsaXI | ACNNNNNCTCC | 8 cut(s) | 34, 64, 1040, 1070, 1413, 1443, 1556, 1586 |
| Bse118I | RCCGGY | 2 cut(s) | 666, 1297 |
| BseAI | TCCGGA | 1 cut(s) | 569 |
| BseBI | CCWGG | 1 cut(s) | 482 |
| BseGI | GGATG | 8 cut(s) | 309, 333, 388, 578, 1263, 1866, 2002, 2290 |
| BseMII | CTCAG | 9 cut(s) | 50, 111, 171, 282, 794, 1214, 1389, 1753, 2103 |
| BseRI | GAGGAG | 2 cut(s) | 1427, 1430 |
| BseSI | GKGCMC | 2 cut(s) | 468, 1447 |
| BseX3I | CGGCCG | 2 cut(s) | 1206, 1236 |
| BseYI | CCCAGC | 7 cut(s) | 218, 1077, 1358, 1597, 2248, 2307, 2319 |
| BsgI | GTGCAG | 1 cut(s) | 1991 |
| Bsh1285I | CGRYCG | 5 cut(s) | 1209, 1239, 2211, 2435, 2439 |
| BshNI | GGYRCC | 5 cut(s) | 463, 1504, 2129, 2165, 2381 |
| BsiEI | CGRYCG | 5 cut(s) | 1209, 1239, 2211, 2435, 2439 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1740 |
| BsiHKCI | CYCGRG | 3 cut(s) | 2133, 2370, 2409 |
| BslFI | GGGAC | 8 cut(s) | 187, 716, 738, 843, 1210, 1824, 2204, 2290 |
| BsmBI | CGTCTC | 3 cut(s) | 56, 1094, 1903 |
| BsmFI | GGGAC | 8 cut(s) | 187, 716, 738, 843, 1210, 1824, 2204, 2290 |
| BsmI | GAATGC | 1 cut(s) | 250 |
| Bso31I | GGTCTC | 2 cut(s) | 1763, 2384 |
| BsoBI | CYCGRG | 3 cut(s) | 2133, 2370, 2409 |
| Bsp120I | GGGCCC | 1 cut(s) | 1443 |
| Bsp1286I | GDGCHC | 3 cut(s) | 468, 1447, 1740 |
| Bsp13I | TCCGGA | 1 cut(s) | 569 |
| Bsp143I | GATC | 8 cut(s) | 477, 876, 1021, 1216, 1519, 1876, 1917, 2432 |
| Bsp1720I | GCTNAGC | 3 cut(s) | 36, 97, 157 |
| Bsp68I | TCGCGA | 1 cut(s) | 999 |
| BspCNI | CTCAG | 9 cut(s) | 49, 110, 170, 281, 795, 1213, 1390, 1752, 2104 |
| BspEI | TCCGGA | 1 cut(s) | 569 |
| BspHI | TCATGA | 1 cut(s) | 1551 |
| BspMAI | CTGCAG | 1 cut(s) | 1932 |
| BspMI | ACCTGC | 2 cut(s) | 284, 957 |
| BspPI | GGATC | 5 cut(s) | 472, 884, 1029, 1224, 1884 |
| BspQI | GCTCTTC | 1 cut(s) | 1728 |
| BspT107I | GGYRCC | 5 cut(s) | 463, 1504, 2129, 2165, 2381 |
| BspTNI | GGTCTC | 2 cut(s) | 1763, 2384 |
| BsrBI | CCGCTC | 5 cut(s) | 407, 1255, 1567, 1594, 1936 |
| BsrFI | RCCGGY | 2 cut(s) | 666, 1297 |
| BssAI | RCCGGY | 2 cut(s) | 666, 1297 |
| BssMI | GATC | 8 cut(s) | 477, 876, 1021, 1216, 1519, 1876, 1917, 2432 |
| BssNAI | GTATAC | 1 cut(s) | 840 |
| BssNI | GRCGYC | 6 cut(s) | 848, 1505, 1709, 1842, 2130, 2186 |
| BssSI | CACGAG | 1 cut(s) | 425 |
| BssT1I | CCWWGG | 3 cut(s) | 634, 1162, 1782 |
| Bst1107I | GTATAC | 1 cut(s) | 840 |
| Bst2BI | CACGAG | 1 cut(s) | 425 |
| Bst2UI | CCWGG | 1 cut(s) | 482 |
| Bst4CI | ACNGT | 5 cut(s) | 589, 748, 1087, 2018, 2381 |
| Bst6I | CTCTTC | 3 cut(s) | 219, 852, 1728 |
| BstACI | GRCGYC | 6 cut(s) | 848, 1505, 1709, 1842, 2130, 2186 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1484 |
| BstBAI | YACGTR | 2 cut(s) | 625, 2345 |
| BstDSI | CCRYGG | 3 cut(s) | 977, 1086, 1846 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 818 |
| BstF5I | GGATG | 8 cut(s) | 309, 333, 388, 578, 1263, 1866, 2002, 2290 |
| BstH2I | RGCGCY | 7 cut(s) | 634, 680, 1233, 1376, 1390, 1508, 2133 |
| BstKTI | GATC | 8 cut(s) | 480, 879, 1024, 1219, 1522, 1879, 1920, 2435 |
| BstMBI | GATC | 8 cut(s) | 477, 876, 1021, 1216, 1519, 1876, 1917, 2432 |
| BstMCI | CGRYCG | 5 cut(s) | 1209, 1239, 2211, 2435, 2439 |
| BstNI | CCWGG | 1 cut(s) | 482 |
| BstNSI | RCATGY | 1 cut(s) | 2152 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 2234 |
| BstSCI | CCNGG | 9 cut(s) | 349, 480, 1095, 1211, 1238, 1721, 2220, 2369, 2370 |
| BstSFI | CTRYAG | 3 cut(s) | 740, 1928, 2253 |
| BstSLI | GKGCMC | 2 cut(s) | 468, 1447 |
| BstX2I | RGATCY | 2 cut(s) | 477, 1876 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1274 |
| BstYI | RGATCY | 2 cut(s) | 477, 1876 |
| BstZ17I | GTATAC | 1 cut(s) | 840 |
| BstZI | CGGCCG | 2 cut(s) | 1206, 1236 |
| BtgI | CCRYGG | 3 cut(s) | 977, 1086, 1846 |
| BtgZI | GCGATG | 3 cut(s) | 1031, 1157, 2120 |
| BtrI | CACGTC | 1 cut(s) | 2200 |
| BtsCI | GGATG | 8 cut(s) | 309, 333, 388, 578, 1263, 1866, 2002, 2290 |
| BtsI | GCAGTG | 1 cut(s) | 276 |
| BtsIMutI | CAGTG | 2 cut(s) | 276, 1341 |
| BtuMI | TCGCGA | 1 cut(s) | 999 |
| BveI | ACCTGC | 2 cut(s) | 284, 957 |
| CaiI | CAGNNNCTG | 1 cut(s) | 481 |
| CciI | TCATGA | 1 cut(s) | 1551 |
| Cfr10I | RCCGGY | 2 cut(s) | 666, 1297 |
| Cfr42I | CCGCGG | 2 cut(s) | 980, 1849 |
| Cfr9I | CCCGGG | 1 cut(s) | 2370 |
| CseI | GACGC | 6 cut(s) | 723, 856, 1010, 1698, 1850, 2175 |
| Csp6I | GTAC | 4 cut(s) | 622, 756, 2259, 2382 |
| CviAII | CATG | 4 cut(s) | 1054, 1552, 1691, 2149 |
| CviQI | GTAC | 4 cut(s) | 622, 756, 2259, 2382 |
| DinI | GGCGCC | 2 cut(s) | 1506, 2131 |
| DpnI | GATC | 8 cut(s) | 479, 878, 1023, 1218, 1521, 1878, 1919, 2434 |
| DpnII | GATC | 8 cut(s) | 477, 876, 1021, 1216, 1519, 1876, 1917, 2432 |
| DrdI | GACNNNNNNGTC | 2 cut(s) | 1399, 2302 |
| DriI | GACNNNNNGTC | 3 cut(s) | 709, 2203, 2397 |
| DseDI | GACNNNNNNGTC | 2 cut(s) | 1399, 2302 |
| EaeI | YGGCCR | 5 cut(s) | 543, 1206, 1236, 1863, 2026 |
| EagI | CGGCCG | 2 cut(s) | 1206, 1236 |
| Eam1104I | CTCTTC | 3 cut(s) | 219, 852, 1728 |
| Eam1105I | GACNNNNNGTC | 3 cut(s) | 709, 2203, 2397 |
| EarI | CTCTTC | 3 cut(s) | 219, 852, 1728 |
| Ecl136II | GAGCTC | 1 cut(s) | 1738 |
| EclXI | CGGCCG | 2 cut(s) | 1206, 1236 |
| Eco130I | CCWWGG | 3 cut(s) | 634, 1162, 1782 |
| Eco24I | GRGCYC | 2 cut(s) | 1447, 1740 |
| Eco31I | GGTCTC | 2 cut(s) | 1763, 2384 |
| Eco47I | GGWCC | 5 cut(s) | 725, 1277, 1350, 2304, 2415 |
| Eco47III | AGCGCT | 1 cut(s) | 1231 |
| Eco52I | CGGCCG | 2 cut(s) | 1206, 1236 |
| Eco53kI | GAGCTC | 1 cut(s) | 1738 |
| Eco57I | CTGAAG | 2 cut(s) | 153, 1639 |
| Eco72I | CACGTG | 1 cut(s) | 2345 |
| Eco88I | CYCGRG | 3 cut(s) | 2133, 2370, 2409 |
| EcoICRI | GAGCTC | 1 cut(s) | 1738 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 818 |
| EcoO109I | RGGNCCY | 4 cut(s) | 581, 725, 1443, 2304 |
| EcoRII | CCWGG | 1 cut(s) | 480 |
| EcoT14I | CCWWGG | 3 cut(s) | 634, 1162, 1782 |
| EcoT38I | GRGCYC | 2 cut(s) | 1447, 1740 |
| EgeI | GGCGCC | 2 cut(s) | 1506, 2131 |
| EheI | GGCGCC | 2 cut(s) | 1506, 2131 |
| ErhI | CCWWGG | 3 cut(s) | 634, 1162, 1782 |
| Esp3I | CGTCTC | 3 cut(s) | 56, 1094, 1903 |
| FaeI | CATG | 4 cut(s) | 1057, 1555, 1694, 2152 |
| FaqI | GGGAC | 8 cut(s) | 187, 716, 738, 843, 1210, 1824, 2204, 2290 |
| FatI | CATG | 4 cut(s) | 1053, 1551, 1690, 2148 |
| FblI | GTMKAC | 4 cut(s) | 839, 945, 1450, 2145 |
| FokI | GGATG | 8 cut(s) | 316, 340, 395, 585, 1270, 1853, 2009, 2277 |
| FriOI | GRGCYC | 2 cut(s) | 1447, 1740 |
| FspBI | CTAG | 2 cut(s) | 617, 764 |
| GsaI | CCCAGC | 7 cut(s) | 222, 1081, 1362, 1601, 2252, 2311, 2323 |
| GsuI | CTGGAG | 5 cut(s) | 458, 1397, 1745, 1901, 2378 |
| HaeII | RGCGCY | 7 cut(s) | 634, 680, 1233, 1376, 1390, 1508, 2133 |
| HgaI | GACGC | 6 cut(s) | 723, 856, 1010, 1698, 1850, 2175 |
| Hin1I | GRCGYC | 6 cut(s) | 848, 1505, 1709, 1842, 2130, 2186 |
| Hin1II | CATG | 4 cut(s) | 1057, 1555, 1694, 2152 |
| HincII | GTYRAC | 4 cut(s) | 286, 322, 946, 1451 |
| HindII | GTYRAC | 4 cut(s) | 286, 322, 946, 1451 |
| HindIII | AAGCTT | 1 cut(s) | 1853 |
| HinfI | GANTC | 7 cut(s) | 251, 397, 704, 1198, 1400, 1526, 1979 |
| HpaI | GTTAAC | 1 cut(s) | 322 |
| HphI | GGTGA | 6 cut(s) | 370, 1102, 1147, 1151, 1178, 2030 |
| Hpy99I | CGWCG | 8 cut(s) | 739, 1004, 1348, 1452, 1636, 2209, 2299, 2381 |
| HpyCH4III | ACNGT | 5 cut(s) | 589, 748, 1087, 2018, 2381 |
| HpyCH4IV | ACGT | 6 cut(s) | 338, 624, 1103, 1896, 2199, 2344 |
| HpyCH4V | TGCA | 4 cut(s) | 642, 1478, 1930, 1972 |
| HpySE526I | ACGT | 6 cut(s) | 338, 624, 1103, 1896, 2199, 2344 |
| Hsp92I | GRCGYC | 6 cut(s) | 848, 1505, 1709, 1842, 2130, 2186 |
| Hsp92II | CATG | 4 cut(s) | 1057, 1555, 1694, 2152 |
| KasI | GGCGCC | 2 cut(s) | 1504, 2129 |
| KflI | GGGWCCC | 1 cut(s) | 2304 |
| Kpn2I | TCCGGA | 1 cut(s) | 569 |
| KpnI | GGTACC | 1 cut(s) | 2385 |
| KroI | GCCGGC | 1 cut(s) | 666 |
| KroNI | GCCGGC | 1 cut(s) | 668 |
| KspAI | GTTAAC | 1 cut(s) | 322 |
| KspI | CCGCGG | 2 cut(s) | 980, 1849 |
| Kzo9I | GATC | 8 cut(s) | 477, 876, 1021, 1216, 1519, 1876, 1917, 2432 |
| LguI | GCTCTTC | 1 cut(s) | 1728 |
| LweI | GCATC | 3 cut(s) | 563, 1134, 1248 |
| MaeI | CTAG | 2 cut(s) | 617, 764 |
| MaeII | ACGT | 6 cut(s) | 338, 624, 1103, 1896, 2199, 2344 |
| MaeIII | GTNAC | 6 cut(s) | 190, 936, 1315, 1686, 2187, 2340 |
| MalI | GATC | 8 cut(s) | 479, 878, 1023, 1218, 1521, 1878, 1919, 2434 |
| MbiI | CCGCTC | 5 cut(s) | 407, 1255, 1567, 1594, 1936 |
| MboI | GATC | 8 cut(s) | 477, 876, 1021, 1216, 1519, 1876, 1917, 2432 |
| MboII | GAAGA | 7 cut(s) | 236, 787, 866, 869, 1181, 1468, 1745 |
| MfeI | CAATTG | 1 cut(s) | 1638 |
| MflI | RGATCY | 2 cut(s) | 477, 1876 |
| MhlI | GDGCHC | 3 cut(s) | 468, 1447, 1740 |
| MlsI | TGGCCA | 1 cut(s) | 545 |
| MluCI | AATT | 5 cut(s) | 14, 174, 491, 550, 1638 |
| MluNI | TGGCCA | 1 cut(s) | 545 |
| Mly113I | GGCGCC | 2 cut(s) | 1505, 2130 |
| MlyI | GAGTC | 5 cut(s) | 698, 1192, 1409, 1520, 1988 |
| MmeI | TCCRAC | 8 cut(s) | 367, 834, 1887, 1992, 2313, 2318, 2426, 2442 |
| Mox20I | TGGCCA | 1 cut(s) | 545 |
| MroI | TCCGGA | 1 cut(s) | 569 |
| MroNI | GCCGGC | 1 cut(s) | 666 |
| MroXI | GAANNNNTTC | 1 cut(s) | 600 |
| MscI | TGGCCA | 1 cut(s) | 545 |
| MseI | TTAA | 4 cut(s) | 321, 797, 1728, 1857 |
| MslI | CAYNNNNRTG | 2 cut(s) | 1164, 1967 |
| Msp20I | TGGCCA | 1 cut(s) | 545 |
| MspR9I | CCNGG | 9 cut(s) | 351, 482, 1097, 1213, 1240, 1723, 2222, 2371, 2372 |
| MunI | CAATTG | 1 cut(s) | 1638 |
| Mva1269I | GAATGC | 1 cut(s) | 250 |
| MvaI | CCWGG | 1 cut(s) | 482 |
| NaeI | GCCGGC | 1 cut(s) | 668 |
| NarI | GGCGCC | 2 cut(s) | 1505, 2130 |
| NciI | CCSGG | 8 cut(s) | 351, 1097, 1213, 1240, 1723, 2222, 2371, 2372 |
| NdeII | GATC | 8 cut(s) | 477, 876, 1021, 1216, 1519, 1876, 1917, 2432 |
| NgoMIV | GCCGGC | 1 cut(s) | 666 |
| NlaIII | CATG | 4 cut(s) | 1057, 1555, 1694, 2152 |
| NmeAIII | GCCGAG | 3 cut(s) | 1087, 1561, 1640 |
| NmuCI | GTSAC | 3 cut(s) | 1315, 2187, 2340 |
| NruI | TCGCGA | 1 cut(s) | 999 |
| NspI | RCATGY | 1 cut(s) | 2152 |
| OliI | CACNNNNGTG | 1 cut(s) | 1164 |
| PagI | TCATGA | 1 cut(s) | 1551 |
| PaqCI | CACCTGC | 1 cut(s) | 284 |
| PciI | ACATGT | 1 cut(s) | 2148 |
| PciSI | GCTCTTC | 1 cut(s) | 1728 |
| PctI | GAATGC | 1 cut(s) | 250 |
| PdiI | GCCGGC | 1 cut(s) | 668 |
| PdmI | GAANNNNTTC | 1 cut(s) | 600 |
| PfeI | GAWTC | 2 cut(s) | 251, 397 |
| PflFI | GACNNNGTC | 2 cut(s) | 48, 2329 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 481, 528 |
| Ple19I | CGATCG | 1 cut(s) | 2435 |
| PleI | GAGTC | 5 cut(s) | 698, 1192, 1408, 1520, 1987 |
| PluTI | GGCGCC | 2 cut(s) | 1508, 2133 |
| PmaCI | CACGTG | 1 cut(s) | 2345 |
| PmlI | CACGTG | 1 cut(s) | 2345 |
| PpsI | GAGTC | 5 cut(s) | 698, 1192, 1408, 1520, 1987 |
| Ppu21I | YACGTR | 2 cut(s) | 625, 2345 |
| PpuMI | RGGWCCY | 2 cut(s) | 725, 2304 |
| PscI | ACATGT | 1 cut(s) | 2148 |
| PshAI | GACNNNNGTC | 1 cut(s) | 2234 |
| Psp124BI | GAGCTC | 1 cut(s) | 1740 |
| Psp5II | RGGWCCY | 2 cut(s) | 725, 2304 |
| Psp6I | CCWGG | 1 cut(s) | 480 |
| PspCI | CACGTG | 1 cut(s) | 2345 |
| PspFI | CCCAGC | 7 cut(s) | 218, 1077, 1358, 1597, 2248, 2307, 2319 |
| PspGI | CCWGG | 1 cut(s) | 480 |
| PspOMI | GGGCCC | 1 cut(s) | 1443 |
| PspPPI | RGGWCCY | 2 cut(s) | 725, 2304 |
| PstI | CTGCAG | 1 cut(s) | 1932 |
| PstNI | CAGNNNCTG | 1 cut(s) | 481 |
| PsuI | RGATCY | 2 cut(s) | 477, 1876 |
| PsyI | GACNNNGTC | 2 cut(s) | 48, 2329 |
| PvuI | CGATCG | 1 cut(s) | 2435 |
| PvuII | CAGCTG | 1 cut(s) | 2252 |
| RruI | TCGCGA | 1 cut(s) | 999 |
| RsaI | GTAC | 4 cut(s) | 623, 757, 2260, 2383 |
| RsaNI | GTAC | 4 cut(s) | 622, 756, 2259, 2382 |
| RseI | CAYNNNNRTG | 2 cut(s) | 1164, 1967 |
| SacI | GAGCTC | 1 cut(s) | 1740 |
| SacII | CCGCGG | 2 cut(s) | 980, 1849 |
| SalI | GTCGAC | 2 cut(s) | 944, 1449 |
| SapI | GCTCTTC | 1 cut(s) | 1728 |
| SaqAI | TTAA | 4 cut(s) | 321, 797, 1728, 1857 |
| Sau3AI | GATC | 8 cut(s) | 477, 876, 1021, 1216, 1519, 1876, 1917, 2432 |
| SchI | GAGTC | 5 cut(s) | 698, 1192, 1409, 1520, 1988 |
| ScrFI | CCNGG | 9 cut(s) | 351, 482, 1097, 1213, 1240, 1723, 2222, 2371, 2372 |
| SduI | GDGCHC | 3 cut(s) | 468, 1447, 1740 |
| SfaNI | GCATC | 3 cut(s) | 563, 1134, 1248 |
| SfcI | CTRYAG | 3 cut(s) | 740, 1928, 2253 |
| SfoI | GGCGCC | 2 cut(s) | 1506, 2131 |
| Sfr303I | CCGCGG | 2 cut(s) | 980, 1849 |
| SgrBI | CCGCGG | 2 cut(s) | 980, 1849 |
| SinI | GGWCC | 5 cut(s) | 725, 1277, 1350, 2304, 2415 |
| SmaI | CCCGGG | 1 cut(s) | 2372 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 1164, 1967 |
| SmlI | CTYRAG | 1 cut(s) | 658 |
| SmoI | CTYRAG | 1 cut(s) | 658 |
| Sse9I | AATT | 5 cut(s) | 14, 174, 491, 550, 1638 |
| SspDI | GGCGCC | 2 cut(s) | 1504, 2129 |
| SspMI | CTAG | 2 cut(s) | 617, 764 |
| SstI | GAGCTC | 1 cut(s) | 1740 |
| StyD4I | CCNGG | 9 cut(s) | 349, 480, 1095, 1211, 1238, 1721, 2220, 2369, 2370 |
| StyI | CCWWGG | 3 cut(s) | 634, 1162, 1782 |
| TaaI | ACNGT | 5 cut(s) | 589, 748, 1087, 2018, 2381 |
| TaiI | ACGT | 6 cut(s) | 341, 627, 1106, 1899, 2202, 2347 |
| TaqI | TCGA | 5 cut(s) | 395, 769, 945, 1450, 2211 |
| TaqII | GACCGA | 2 cut(s) | 2197, 2425 |
| TasI | AATT | 5 cut(s) | 14, 174, 491, 550, 1638 |
| TfiI | GAWTC | 2 cut(s) | 251, 397 |
| Tru1I | TTAA | 4 cut(s) | 321, 797, 1728, 1857 |
| Tru9I | TTAA | 4 cut(s) | 321, 797, 1728, 1857 |
| TscAI | CASTG | 2 cut(s) | 283, 1341 |
| TseFI | GTSAC | 3 cut(s) | 1315, 2187, 2340 |
| Tsp45I | GTSAC | 3 cut(s) | 1315, 2187, 2340 |
| TspDTI | ATGAA | 5 cut(s) | 344, 788, 1540, 1905, 2018 |
| TspGWI | ACGGA | 2 cut(s) | 428, 2312 |
| TspMI | CCCGGG | 1 cut(s) | 2370 |
| TspRI | CASTG | 2 cut(s) | 283, 1341 |
| Tth111I | GACNNNGTC | 2 cut(s) | 48, 2329 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 481, 528 |
| VpaK11BI | GGWCC | 5 cut(s) | 725, 1277, 1350, 2304, 2415 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 818 |
| XapI | RAATTY | 3 cut(s) | 14, 174, 491 |
| XceI | RCATGY | 1 cut(s) | 2152 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 1160, 1789 |
| XmaI | CCCGGG | 1 cut(s) | 2370 |
| XmiI | GTMKAC | 4 cut(s) | 839, 945, 1450, 2145 |
| XmnI | GAANNNNTTC | 1 cut(s) | 600 |
| XspI | CTAG | 2 cut(s) | 617, 764 |