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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 1 cut(s) | 623 |
| AccB1I | GGYRCC | 2 cut(s) | 623, 1586 |
| AccB7I | CCANNNNNTGG | 3 cut(s) | 476, 523, 1596 |
| AccBSI | CCGCTC | 2 cut(s) | 244, 1294 |
| AccI | GTMKAC | 1 cut(s) | 98 |
| AccII | CGCG | 1 cut(s) | 766 |
| AclWI | GGATC | 5 cut(s) | 386, 680, 693, 920, 1381 |
| AcoI | YGGCCR | 4 cut(s) | 1278, 1362, 1416, 1479 |
| AcsI | RAATTY | 1 cut(s) | 18 |
| AcuI | CTGAAG | 1 cut(s) | 1376 |
| AcyI | GRCGYC | 4 cut(s) | 893, 1200, 1587, 1607 |
| AfaI | GTAC | 3 cut(s) | 410, 625, 1623 |
| AflIII | ACRYGT | 2 cut(s) | 48, 520 |
| AgsI | TTSAA | 4 cut(s) | 24, 58, 863, 1501 |
| AhdI | GACNNNNNGTC | 2 cut(s) | 40, 1818 |
| AhlI | ACTAGT | 1 cut(s) | 995 |
| AjiI | CACGTC | 2 cut(s) | 49, 1222 |
| AjnI | CCWGG | 7 cut(s) | 38, 158, 567, 1123, 1203, 1299, 1452 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1726, 1758 |
| Alw21I | GWGCWC | 2 cut(s) | 421, 1162 |
| Alw26I | GTCTC | 4 cut(s) | 1185, 1191, 1767, 1805 |
| Alw44I | GTGCAC | 1 cut(s) | 417 |
| AlwI | GGATC | 5 cut(s) | 386, 680, 693, 920, 1381 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 476, 777 |
| Ama87I | CYCGRG | 4 cut(s) | 1144, 1687, 1791, 1830 |
| AoxI | GGCC | 9 cut(s) | 359, 573, 721, 1011, 1278, 1362, 1416, 1479, 1659 |
| ApaLI | GTGCAC | 1 cut(s) | 417 |
| ApeKI | GCWGC | 7 cut(s) | 221, 263, 1256, 1348, 1475, 1704, 1867 |
| ApoI | RAATTY | 1 cut(s) | 18 |
| Asp718I | GGTACC | 1 cut(s) | 623 |
| AspLEI | GCGC | 7 cut(s) | 529, 729, 766, 934, 1528, 1589, 1709 |
| AspS9I | GGNCC | 7 cut(s) | 322, 359, 573, 721, 802, 1297, 1660 |
| AsuC2I | CCSGG | 3 cut(s) | 873, 1792, 1793 |
| AsuHPI | GGTGA | 4 cut(s) | 217, 1052, 1184, 1451 |
| AsuNHI | GCTAGC | 2 cut(s) | 266, 884 |
| AvaI | CYCGRG | 4 cut(s) | 1144, 1687, 1791, 1830 |
| AvaII | GGWCC | 3 cut(s) | 322, 802, 1297 |
| BaeGI | GKGCMC | 1 cut(s) | 421 |
| BalI | TGGCCA | 1 cut(s) | 1280 |
| BamHI | GGATCC | 1 cut(s) | 685 |
| BanI | GGYRCC | 2 cut(s) | 623, 1586 |
| BanII | GRGCYC | 1 cut(s) | 1162 |
| BauI | CACGAG | 4 cut(s) | 420, 741, 852, 1764 |
| Bbv12I | GWGCWC | 2 cut(s) | 421, 1162 |
| BbvCI | CCTCAGC | 2 cut(s) | 1086, 1461 |
| BbvI | GCAGC | 7 cut(s) | 208, 250, 1268, 1335, 1462, 1716, 1879 |
| BccI | CCATC | 6 cut(s) | 290, 386, 1715, 1793, 1871, 1886 |
| BceAI | ACGGC | 4 cut(s) | 349, 399, 998, 1604 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 325, 359, 833, 867 |
| BciT130I | CCWGG | 7 cut(s) | 40, 160, 569, 1125, 1205, 1301, 1454 |
| BciVI | GTATCC | 1 cut(s) | 298 |
| BcnI | CCSGG | 3 cut(s) | 873, 1792, 1793 |
| BcoDI | GTCTC | 4 cut(s) | 1185, 1191, 1767, 1805 |
| BcuI | ACTAGT | 1 cut(s) | 995 |
| BfaI | CTAG | 7 cut(s) | 131, 201, 267, 885, 996, 1005, 1151 |
| BfmI | CTRYAG | 1 cut(s) | 1806 |
| BfoI | RGCGCY | 4 cut(s) | 530, 935, 1529, 1590 |
| BfuI | GTATCC | 1 cut(s) | 298 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 1415 |
| Bme18I | GGWCC | 3 cut(s) | 322, 802, 1297 |
| BmeRI | GACNNNNNGTC | 2 cut(s) | 40, 1818 |
| BmeT110I | CYCGRG | 4 cut(s) | 1144, 1687, 1791, 1830 |
| BmgBI | CACGTC | 2 cut(s) | 49, 1222 |
| BmgT120I | GGNCC | 7 cut(s) | 322, 359, 573, 721, 802, 1297, 1660 |
| BmrI | ACTGGG | 1 cut(s) | 1812 |
| BmsI | GCATC | 5 cut(s) | 502, 1103, 1243, 1252, 1627 |
| BmtI | GCTAGC | 2 cut(s) | 270, 888 |
| BmuI | ACTGGG | 1 cut(s) | 1812 |
| BpmI | CTGGAG | 5 cut(s) | 22, 453, 1235, 1322, 1349 |
| Bpu10I | CCTNAGC | 4 cut(s) | 1086, 1161, 1461, 1632 |
| BpuEI | CTTGAG | 1 cut(s) | 577 |
| BpuMI | CCSGG | 3 cut(s) | 873, 1792, 1793 |
| BsaHI | GRCGYC | 4 cut(s) | 893, 1200, 1587, 1607 |
| BsaI | GGTCTC | 1 cut(s) | 1185 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 1559, 1589, 1726, 1756 |
| Bse118I | RCCGGY | 1 cut(s) | 1645 |
| Bse1I | ACTGG | 4 cut(s) | 823, 1047, 1419, 1818 |
| Bse3DI | GCAATG | 2 cut(s) | 86, 1063 |
| BseBI | CCWGG | 7 cut(s) | 40, 160, 569, 1125, 1205, 1301, 1454 |
| BseGI | GGATG | 4 cut(s) | 301, 1642, 1726, 1804 |
| BseMI | GCAATG | 2 cut(s) | 86, 1063 |
| BseMII | CTCAG | 8 cut(s) | 1077, 1175, 1196, 1452, 1524, 1682, 1742, 1763 |
| BseNI | ACTGG | 4 cut(s) | 823, 1047, 1419, 1818 |
| BseRI | GAGGAG | 3 cut(s) | 254, 1182, 1731 |
| BseSI | GKGCMC | 1 cut(s) | 421 |
| BseX3I | CGGCCG | 1 cut(s) | 1479 |
| BseXI | GCAGC | 7 cut(s) | 208, 250, 1268, 1335, 1462, 1716, 1879 |
| BseYI | CCCAGC | 2 cut(s) | 1068, 1192 |
| BsgI | GTGCAG | 1 cut(s) | 1095 |
| Bsh1236I | CGCG | 1 cut(s) | 766 |
| Bsh1285I | CGRYCG | 1 cut(s) | 1482 |
| BshFI | GGCC | 9 cut(s) | 361, 575, 723, 1013, 1280, 1364, 1418, 1481, 1661 |
| BshNI | GGYRCC | 2 cut(s) | 623, 1586 |
| BsiEI | CGRYCG | 1 cut(s) | 1482 |
| BsiHKAI | GWGCWC | 2 cut(s) | 421, 1162 |
| BsiHKCI | CYCGRG | 4 cut(s) | 1144, 1687, 1791, 1830 |
| BsiSI | CCGG | 4 cut(s) | 872, 1646, 1715, 1792 |
| BslFI | GGGAC | 7 cut(s) | 499, 904, 1006, 1304, 1310, 1327, 1806 |
| BsmAI | GTCTC | 4 cut(s) | 1185, 1191, 1767, 1805 |
| BsmBI | CGTCTC | 1 cut(s) | 1191 |
| BsmFI | GGGAC | 7 cut(s) | 499, 904, 1006, 1304, 1310, 1327, 1806 |
| BsnI | GGCC | 9 cut(s) | 361, 575, 723, 1013, 1280, 1364, 1418, 1481, 1661 |
| Bso31I | GGTCTC | 1 cut(s) | 1185 |
| BsoBI | CYCGRG | 4 cut(s) | 1144, 1687, 1791, 1830 |
| Bsp1286I | GDGCHC | 2 cut(s) | 421, 1162 |
| Bsp143I | GATC | 7 cut(s) | 135, 391, 427, 685, 912, 1354, 1386 |
| Bsp19I | CCATGG | 1 cut(s) | 908 |
| BspANI | GGCC | 9 cut(s) | 361, 575, 723, 1013, 1280, 1364, 1418, 1481, 1661 |
| BspCNI | CTCAG | 8 cut(s) | 1078, 1174, 1195, 1453, 1525, 1681, 1741, 1762 |
| BspFNI | CGCG | 1 cut(s) | 766 |
| BspOI | GCTAGC | 2 cut(s) | 270, 888 |
| BspPI | GGATC | 5 cut(s) | 386, 680, 693, 920, 1381 |
| BspT107I | GGYRCC | 2 cut(s) | 623, 1586 |
| BspTNI | GGTCTC | 1 cut(s) | 1185 |
| BsrBI | CCGCTC | 2 cut(s) | 244, 1294 |
| BsrDI | GCAATG | 2 cut(s) | 86, 1063 |
| BsrFI | RCCGGY | 1 cut(s) | 1645 |
| BsrI | ACTGG | 4 cut(s) | 823, 1047, 1419, 1818 |
| BssAI | RCCGGY | 1 cut(s) | 1645 |
| BssMI | GATC | 7 cut(s) | 135, 391, 427, 685, 912, 1354, 1386 |
| BssNI | GRCGYC | 4 cut(s) | 893, 1200, 1587, 1607 |
| BssSI | CACGAG | 4 cut(s) | 420, 741, 852, 1764 |
| BssT1I | CCWWGG | 6 cut(s) | 437, 532, 908, 918, 1239, 1368 |
| Bst2BI | CACGAG | 4 cut(s) | 420, 741, 852, 1764 |
| Bst2UI | CCWGG | 7 cut(s) | 40, 160, 569, 1125, 1205, 1301, 1454 |
| Bst4CI | ACNGT | 7 cut(s) | 370, 704, 971, 1040, 1058, 1250, 1679 |
| Bst6I | CTCTTC | 1 cut(s) | 744 |
| BstACI | GRCGYC | 4 cut(s) | 893, 1200, 1587, 1607 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1262 |
| BstC8I | GCNNGC | 9 cut(s) | 268, 400, 725, 886, 1450, 1617, 1629, 1647, 1684 |
| BstDSI | CCRYGG | 3 cut(s) | 908, 927, 1267 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1238 |
| BstF5I | GGATG | 4 cut(s) | 301, 1642, 1726, 1804 |
| BstFNI | CGCG | 1 cut(s) | 766 |
| BstH2I | RGCGCY | 4 cut(s) | 530, 935, 1529, 1590 |
| BstHHI | GCGC | 7 cut(s) | 529, 729, 766, 934, 1528, 1589, 1709 |
| BstKTI | GATC | 7 cut(s) | 138, 394, 430, 688, 915, 1357, 1389 |
| BstMAI | GTCTC | 4 cut(s) | 1185, 1191, 1767, 1805 |
| BstMBI | GATC | 7 cut(s) | 135, 391, 427, 685, 912, 1354, 1386 |
| BstMCI | CGRYCG | 1 cut(s) | 1482 |
| BstNI | CCWGG | 7 cut(s) | 40, 160, 569, 1125, 1205, 1301, 1454 |
| BstNSI | RCATGY | 1 cut(s) | 524 |
| BstSFI | CTRYAG | 1 cut(s) | 1806 |
| BstSLI | GKGCMC | 1 cut(s) | 421 |
| BstUI | CGCG | 1 cut(s) | 766 |
| BstV1I | GCAGC | 7 cut(s) | 208, 250, 1268, 1335, 1462, 1716, 1879 |
| BstX2I | RGATCY | 3 cut(s) | 685, 912, 1386 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 909 |
| BstYI | RGATCY | 3 cut(s) | 685, 912, 1386 |
| BstZI | CGGCCG | 1 cut(s) | 1479 |
| BsuI | GTATCC | 1 cut(s) | 298 |
| BsuRI | GGCC | 9 cut(s) | 361, 575, 723, 1013, 1280, 1364, 1418, 1481, 1661 |
| BtgI | CCRYGG | 3 cut(s) | 908, 927, 1267 |
| BtgZI | GCGATG | 1 cut(s) | 479 |
| BtrI | CACGTC | 2 cut(s) | 49, 1222 |
| BtsCI | GGATG | 4 cut(s) | 301, 1642, 1726, 1804 |
| BtsI | GCAGTG | 2 cut(s) | 34, 1135 |
| BtsIMutI | CAGTG | 6 cut(s) | 34, 816, 1019, 1054, 1135, 1684 |
| Cac8I | GCNNGC | 9 cut(s) | 268, 400, 725, 886, 1450, 1617, 1629, 1647, 1684 |
| CaiI | CAGNNNCTG | 2 cut(s) | 476, 777 |
| CciNI | GCGGCCGC | 1 cut(s) | 1479 |
| CfoI | GCGC | 7 cut(s) | 529, 729, 766, 934, 1528, 1589, 1709 |
| Cfr10I | RCCGGY | 1 cut(s) | 1645 |
| Cfr13I | GGNCC | 7 cut(s) | 322, 359, 573, 721, 802, 1297, 1660 |
| Cfr9I | CCCGGG | 1 cut(s) | 1791 |
| CseI | GACGC | 5 cut(s) | 80, 901, 1208, 1596, 1895 |
| Csp6I | GTAC | 3 cut(s) | 409, 624, 1622 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 565, 600, 1654, 1689 |
| CviAII | CATG | 9 cut(s) | 104, 521, 595, 607, 652, 760, 909, 1316, 1612 |
| CviQI | GTAC | 3 cut(s) | 409, 624, 1622 |
| DinI | GGCGCC | 1 cut(s) | 1588 |
| DpnI | GATC | 7 cut(s) | 137, 393, 429, 687, 914, 1356, 1388 |
| DpnII | GATC | 7 cut(s) | 135, 391, 427, 685, 912, 1354, 1386 |
| DriI | GACNNNNNGTC | 2 cut(s) | 40, 1818 |
| EaeI | YGGCCR | 4 cut(s) | 1278, 1362, 1416, 1479 |
| EagI | CGGCCG | 1 cut(s) | 1479 |
| Eam1104I | CTCTTC | 1 cut(s) | 744 |
| Eam1105I | GACNNNNNGTC | 2 cut(s) | 40, 1818 |
| EarI | CTCTTC | 1 cut(s) | 744 |
| EciI | GGCGGA | 8 cut(s) | 80, 423, 858, 1526, 1632, 1733, 1811, 1851 |
| Ecl136II | GAGCTC | 1 cut(s) | 1160 |
| EclXI | CGGCCG | 1 cut(s) | 1479 |
| Eco130I | CCWWGG | 6 cut(s) | 437, 532, 908, 918, 1239, 1368 |
| Eco24I | GRGCYC | 1 cut(s) | 1162 |
| Eco31I | GGTCTC | 1 cut(s) | 1185 |
| Eco47I | GGWCC | 3 cut(s) | 322, 802, 1297 |
| Eco52I | CGGCCG | 1 cut(s) | 1479 |
| Eco53kI | GAGCTC | 1 cut(s) | 1160 |
| Eco57I | CTGAAG | 1 cut(s) | 1376 |
| Eco88I | CYCGRG | 4 cut(s) | 1144, 1687, 1791, 1830 |
| EcoICRI | GAGCTC | 1 cut(s) | 1160 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1238 |
| EcoO109I | RGGNCCY | 2 cut(s) | 322, 1297 |
| EcoRII | CCWGG | 7 cut(s) | 38, 158, 567, 1123, 1203, 1299, 1452 |
| EcoT14I | CCWWGG | 6 cut(s) | 437, 532, 908, 918, 1239, 1368 |
| EcoT38I | GRGCYC | 1 cut(s) | 1162 |
| EgeI | GGCGCC | 1 cut(s) | 1588 |
| EheI | GGCGCC | 1 cut(s) | 1588 |
| ErhI | CCWWGG | 6 cut(s) | 437, 532, 908, 918, 1239, 1368 |
| Esp3I | CGTCTC | 1 cut(s) | 1191 |
| FaeI | CATG | 9 cut(s) | 107, 524, 598, 610, 655, 763, 912, 1319, 1615 |
| FaqI | GGGAC | 7 cut(s) | 499, 904, 1006, 1304, 1310, 1327, 1806 |
| FatI | CATG | 9 cut(s) | 103, 520, 594, 606, 651, 759, 908, 1315, 1611 |
| FauI | CCCGC | 9 cut(s) | 346, 395, 612, 657, 675, 881, 982, 1287, 1389 |
| FblI | GTMKAC | 1 cut(s) | 98 |
| FokI | GGATG | 4 cut(s) | 308, 1649, 1733, 1811 |
| FriOI | GRGCYC | 1 cut(s) | 1162 |
| FspBI | CTAG | 7 cut(s) | 131, 201, 267, 885, 996, 1005, 1151 |
| GlaI | GCGC | 7 cut(s) | 528, 728, 765, 933, 1527, 1588, 1708 |
| GsaI | CCCAGC | 2 cut(s) | 1072, 1196 |
| GsuI | CTGGAG | 5 cut(s) | 22, 453, 1235, 1322, 1349 |
| HaeII | RGCGCY | 4 cut(s) | 530, 935, 1529, 1590 |
| HaeIII | GGCC | 9 cut(s) | 361, 575, 723, 1013, 1280, 1364, 1418, 1481, 1661 |
| HapII | CCGG | 4 cut(s) | 872, 1646, 1715, 1792 |
| HgaI | GACGC | 5 cut(s) | 80, 901, 1208, 1596, 1895 |
| HhaI | GCGC | 7 cut(s) | 529, 729, 766, 934, 1528, 1589, 1709 |
| Hin1I | GRCGYC | 4 cut(s) | 893, 1200, 1587, 1607 |
| Hin1II | CATG | 9 cut(s) | 107, 524, 598, 610, 655, 763, 912, 1319, 1615 |
| Hin6I | GCGC | 7 cut(s) | 527, 727, 764, 932, 1526, 1587, 1707 |
| HinP1I | GCGC | 7 cut(s) | 527, 727, 764, 932, 1526, 1587, 1707 |
| HincII | GTYRAC | 1 cut(s) | 1675 |
| HindII | GTYRAC | 1 cut(s) | 1675 |
| HindIII | AAGCTT | 1 cut(s) | 581 |
| HpaII | CCGG | 4 cut(s) | 872, 1646, 1715, 1792 |
| HphI | GGTGA | 4 cut(s) | 217, 1052, 1184, 1451 |
| Hpy166II | GTNNAC | 5 cut(s) | 99, 409, 419, 553, 1675 |
| Hpy188I | TCNGA | 6 cut(s) | 46, 193, 773, 1185, 1756, 1840 |
| Hpy188III | TCNNGA | 3 cut(s) | 470, 743, 800 |
| Hpy8I | GTNNAC | 5 cut(s) | 99, 409, 419, 553, 1675 |
| Hpy99I | CGWCG | 2 cut(s) | 971, 983 |
| HpyCH4III | ACNGT | 7 cut(s) | 370, 704, 971, 1040, 1058, 1250, 1679 |
| HpyCH4IV | ACGT | 6 cut(s) | 9, 48, 60, 187, 1221, 1563 |
| HpyCH4V | TGCA | 5 cut(s) | 107, 419, 1112, 1256, 1351 |
| HpySE526I | ACGT | 6 cut(s) | 9, 48, 60, 187, 1221, 1563 |
| Hsp92I | GRCGYC | 4 cut(s) | 893, 1200, 1587, 1607 |
| Hsp92II | CATG | 9 cut(s) | 107, 524, 598, 610, 655, 763, 912, 1319, 1615 |
| HspAI | GCGC | 7 cut(s) | 527, 727, 764, 932, 1526, 1587, 1707 |
| KasI | GGCGCC | 1 cut(s) | 1586 |
| KpnI | GGTACC | 1 cut(s) | 627 |
| KroI | GCCGGC | 1 cut(s) | 1645 |
| KroNI | GCCGGC | 1 cut(s) | 1647 |
| Kzo9I | GATC | 7 cut(s) | 135, 391, 427, 685, 912, 1354, 1386 |
| Lsp1109I | GCAGC | 7 cut(s) | 208, 250, 1268, 1335, 1462, 1716, 1879 |
| LweI | GCATC | 5 cut(s) | 502, 1103, 1243, 1252, 1627 |
| MaeI | CTAG | 7 cut(s) | 131, 201, 267, 885, 996, 1005, 1151 |
| MaeII | ACGT | 6 cut(s) | 9, 48, 60, 187, 1221, 1563 |
| MaeIII | GTNAC | 4 cut(s) | 329, 875, 1058, 1172 |
| MalI | GATC | 7 cut(s) | 137, 393, 429, 687, 914, 1356, 1388 |
| MbiI | CCGCTC | 2 cut(s) | 244, 1294 |
| MboI | GATC | 7 cut(s) | 135, 391, 427, 685, 912, 1354, 1386 |
| MboII | GAAGA | 4 cut(s) | 422, 758, 761, 788 |
| MfeI | CAATTG | 2 cut(s) | 845, 1287 |
| MflI | RGATCY | 3 cut(s) | 685, 912, 1386 |
| MhlI | GDGCHC | 2 cut(s) | 421, 1162 |
| MlsI | TGGCCA | 1 cut(s) | 1280 |
| MluCI | AATT | 3 cut(s) | 18, 845, 1287 |
| MluNI | TGGCCA | 1 cut(s) | 1280 |
| Mly113I | GGCGCC | 1 cut(s) | 1587 |
| MlyI | GAGTC | 7 cut(s) | 29, 77, 568, 733, 844, 1409, 1807 |
| MmeI | TCCRAC | 4 cut(s) | 273, 1054, 1085, 1734 |
| Mox20I | TGGCCA | 1 cut(s) | 1280 |
| MreI | CGCCGGCG | 1 cut(s) | 1645 |
| MroNI | GCCGGC | 1 cut(s) | 1645 |
| MscI | TGGCCA | 1 cut(s) | 1280 |
| MseI | TTAA | 4 cut(s) | 462, 716, 837, 1425 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1875 |
| Msp20I | TGGCCA | 1 cut(s) | 1280 |
| MspA1I | CMGCKG | 5 cut(s) | 278, 402, 1085, 1396, 1487 |
| MspI | CCGG | 4 cut(s) | 872, 1646, 1715, 1792 |
| MunI | CAATTG | 2 cut(s) | 845, 1287 |
| MvaI | CCWGG | 7 cut(s) | 40, 160, 569, 1125, 1205, 1301, 1454 |
| MvnI | CGCG | 1 cut(s) | 766 |
| NaeI | GCCGGC | 1 cut(s) | 1647 |
| NarI | GGCGCC | 1 cut(s) | 1587 |
| NciI | CCSGG | 3 cut(s) | 873, 1792, 1793 |
| NcoI | CCATGG | 1 cut(s) | 908 |
| NdeII | GATC | 7 cut(s) | 135, 391, 427, 685, 912, 1354, 1386 |
| NgoMIV | GCCGGC | 1 cut(s) | 1645 |
| NheI | GCTAGC | 2 cut(s) | 266, 884 |
| NlaIII | CATG | 9 cut(s) | 107, 524, 598, 610, 655, 763, 912, 1319, 1615 |
| NmeAIII | GCCGAG | 1 cut(s) | 1444 |
| NmuCI | GTSAC | 3 cut(s) | 329, 1058, 1172 |
| NotI | GCGGCCGC | 1 cut(s) | 1479 |
| NspI | RCATGY | 1 cut(s) | 524 |
| PaeR7I | CTCGAG | 1 cut(s) | 1830 |
| PasI | CCCWGGG | 1 cut(s) | 159 |
| PciI | ACATGT | 1 cut(s) | 520 |
| PcsI | WCGNNNNNNNCGW | 4 cut(s) | 184, 763, 975, 1151 |
| PdiI | GCCGGC | 1 cut(s) | 1647 |
| PfeI | GAWTC | 4 cut(s) | 473, 602, 647, 787 |
| PflMI | CCANNNNNTGG | 3 cut(s) | 476, 523, 1596 |
| PleI | GAGTC | 7 cut(s) | 29, 77, 567, 733, 844, 1408, 1807 |
| PluTI | GGCGCC | 1 cut(s) | 1590 |
| PpsI | GAGTC | 7 cut(s) | 29, 77, 567, 733, 844, 1408, 1807 |
| PpuMI | RGGWCCY | 2 cut(s) | 322, 1297 |
| PscI | ACATGT | 1 cut(s) | 520 |
| Psp124BI | GAGCTC | 1 cut(s) | 1162 |
| Psp5II | RGGWCCY | 2 cut(s) | 322, 1297 |
| Psp6I | CCWGG | 7 cut(s) | 38, 158, 567, 1123, 1203, 1299, 1452 |
| PspFI | CCCAGC | 2 cut(s) | 1068, 1192 |
| PspGI | CCWGG | 7 cut(s) | 38, 158, 567, 1123, 1203, 1299, 1452 |
| PspPI | GGNCC | 7 cut(s) | 322, 359, 573, 721, 802, 1297, 1660 |
| PspPPI | RGGWCCY | 2 cut(s) | 322, 1297 |
| PspXI | VCTCGAGB | 1 cut(s) | 1830 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 955, 987 |
| PstNI | CAGNNNCTG | 2 cut(s) | 476, 777 |
| PsuI | RGATCY | 3 cut(s) | 685, 912, 1386 |
| RsaI | GTAC | 3 cut(s) | 410, 625, 1623 |
| RsaNI | GTAC | 3 cut(s) | 409, 624, 1622 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1875 |
| SacI | GAGCTC | 1 cut(s) | 1162 |
| SaqAI | TTAA | 4 cut(s) | 462, 716, 837, 1425 |
| Sau3AI | GATC | 7 cut(s) | 135, 391, 427, 685, 912, 1354, 1386 |
| Sau96I | GGNCC | 7 cut(s) | 322, 359, 573, 721, 802, 1297, 1660 |
| SchI | GAGTC | 7 cut(s) | 29, 77, 568, 733, 844, 1409, 1807 |
| SduI | GDGCHC | 2 cut(s) | 421, 1162 |
| SfaNI | GCATC | 5 cut(s) | 502, 1103, 1243, 1252, 1627 |
| SfcI | CTRYAG | 1 cut(s) | 1806 |
| SfoI | GGCGCC | 1 cut(s) | 1588 |
| Sfr274I | CTCGAG | 1 cut(s) | 1830 |
| SgrAI | CRCCGGYG | 1 cut(s) | 1645 |
| SinI | GGWCC | 3 cut(s) | 322, 802, 1297 |
| SlaI | CTCGAG | 1 cut(s) | 1830 |
| SmaI | CCCGGG | 1 cut(s) | 1793 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1875 |
| SmlI | CTYRAG | 2 cut(s) | 556, 1830 |
| SmoI | CTYRAG | 2 cut(s) | 556, 1830 |
| SpeI | ACTAGT | 1 cut(s) | 995 |
| Sse9I | AATT | 3 cut(s) | 18, 845, 1287 |
| SspDI | GGCGCC | 1 cut(s) | 1586 |
| SspMI | CTAG | 7 cut(s) | 131, 201, 267, 885, 996, 1005, 1151 |
| SstI | GAGCTC | 1 cut(s) | 1162 |
| StyI | CCWWGG | 6 cut(s) | 437, 532, 908, 918, 1239, 1368 |
| TaaI | ACNGT | 7 cut(s) | 370, 704, 971, 1040, 1058, 1250, 1679 |
| TaiI | ACGT | 6 cut(s) | 12, 51, 63, 190, 1224, 1566 |
| TaqI | TCGA | 5 cut(s) | 138, 345, 390, 1134, 1831 |
| TasI | AATT | 3 cut(s) | 18, 845, 1287 |
| TatI | WGTACW | 1 cut(s) | 408 |
| TfiI | GAWTC | 4 cut(s) | 473, 602, 647, 787 |
| Tru1I | TTAA | 4 cut(s) | 462, 716, 837, 1425 |
| Tru9I | TTAA | 4 cut(s) | 462, 716, 837, 1425 |
| TscAI | CASTG | 6 cut(s) | 34, 823, 1026, 1054, 1135, 1684 |
| TseFI | GTSAC | 3 cut(s) | 329, 1058, 1172 |
| TseI | GCWGC | 7 cut(s) | 221, 263, 1256, 1348, 1475, 1704, 1867 |
| Tsp45I | GTSAC | 3 cut(s) | 329, 1058, 1172 |
| TspDTI | ATGAA | 3 cut(s) | 363, 611, 656 |
| TspGWI | ACGGA | 2 cut(s) | 84, 317 |
| TspMI | CCCGGG | 1 cut(s) | 1791 |
| TspRI | CASTG | 6 cut(s) | 34, 823, 1026, 1054, 1135, 1684 |
| Van91I | CCANNNNNTGG | 3 cut(s) | 476, 523, 1596 |
| VneI | GTGCAC | 1 cut(s) | 417 |
| VpaK11BI | GGWCC | 3 cut(s) | 322, 802, 1297 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1238 |
| XapI | RAATTY | 1 cut(s) | 18 |
| XceI | RCATGY | 1 cut(s) | 524 |
| XcmI | CCANNNNNNNNNTGG | 4 cut(s) | 925, 956, 1026, 1070 |
| XhoI | CTCGAG | 1 cut(s) | 1830 |
| XmaI | CCCGGG | 1 cut(s) | 1791 |
| XmiI | GTMKAC | 1 cut(s) | 98 |
| XspI | CTAG | 7 cut(s) | 131, 201, 267, 885, 996, 1005, 1151 |