Putative gypsy type transposon
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 1995 |
| Acc36I | ACCTGC | 1 cut(s) | 714 |
| AccB1I | GGYRCC | 3 cut(s) | 697, 2067, 2321 |
| AccB7I | CCANNNNNTGG | 4 cut(s) | 333, 762, 2367, 2581 |
| AccBSI | CCGCTC | 7 cut(s) | 1040, 1710, 1924, 2065, 2086, 2481, 2643 |
| AccI | GTMKAC | 1 cut(s) | 1823 |
| AccIII | TCCGGA | 2 cut(s) | 39, 364 |
| AclWI | GGATC | 2 cut(s) | 706, 2596 |
| AcoI | YGGCCR | 3 cut(s) | 2055, 2178, 2461 |
| AcsI | RAATTY | 2 cut(s) | 247, 2504 |
| AcuI | CTGAAG | 6 cut(s) | 584, 1338, 1559, 1831, 2147, 2697 |
| AcvI | CACGTG | 1 cut(s) | 67 |
| AcyI | GRCGYC | 4 cut(s) | 1507, 1901, 1992, 2531 |
| AdeI | CACNNNGTG | 1 cut(s) | 1143 |
| AflIII | ACRYGT | 4 cut(s) | 64, 66, 1172, 2109 |
| AgsI | TTSAA | 7 cut(s) | 97, 630, 1297, 1685, 2156, 2264, 2471 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 943 |
| AjiI | CACGTC | 1 cut(s) | 362 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1749, 1781 |
| Alw21I | GWGCWC | 1 cut(s) | 660 |
| Alw26I | GTCTC | 2 cut(s) | 1136, 1253 |
| Alw44I | GTGCAC | 1 cut(s) | 656 |
| AlwI | GGATC | 2 cut(s) | 706, 2596 |
| Ama87I | CYCGRG | 2 cut(s) | 1637, 2482 |
| Aor13HI | TCCGGA | 2 cut(s) | 39, 364 |
| ApaI | GGGCCC | 1 cut(s) | 1636 |
| ApaLI | GTGCAC | 1 cut(s) | 656 |
| ApoI | RAATTY | 2 cut(s) | 247, 2504 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1573, 1605 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 2160 |
| AsuC2I | CCSGG | 5 cut(s) | 585, 1141, 1269, 1630, 2129 |
| AsuHPI | GGTGA | 9 cut(s) | 604, 1129, 1469, 1618, 1766, 1766, 2143, 2222, 2513 |
| AvaI | CYCGRG | 2 cut(s) | 1637, 2482 |
| AvaII | GGWCC | 4 cut(s) | 815, 1309, 1570, 2125 |
| AxyI | CCTNAGG | 2 cut(s) | 932, 1671 |
| BaeGI | GKGCMC | 4 cut(s) | 660, 755, 1636, 2299 |
| BalI | TGGCCA | 2 cut(s) | 2057, 2463 |
| BanI | GGYRCC | 3 cut(s) | 697, 2067, 2321 |
| BanII | GRGCYC | 3 cut(s) | 1406, 1636, 2479 |
| BauI | CACGAG | 4 cut(s) | 221, 659, 1062, 1883 |
| BbrPI | CACGTG | 1 cut(s) | 67 |
| BbsI | GAAGAC | 2 cut(s) | 124, 1376 |
| Bbv12I | GWGCWC | 1 cut(s) | 660 |
| BbvCI | CCTCAGC | 2 cut(s) | 1931, 2232 |
| BccI | CCATC | 6 cut(s) | 53, 1040, 1414, 2407, 2582, 2655 |
| BceAI | ACGGC | 9 cut(s) | 88, 523, 536, 993, 1389, 1552, 1572, 1856, 2035 |
| BciVI | GTATCC | 1 cut(s) | 472 |
| BcnI | CCSGG | 5 cut(s) | 585, 1141, 1269, 1630, 2129 |
| BcoDI | GTCTC | 2 cut(s) | 1136, 1253 |
| BfaI | CTAG | 4 cut(s) | 141, 305, 2204, 2220 |
| BfmI | CTRYAG | 6 cut(s) | 51, 320, 635, 707, 1952, 2345 |
| BfoI | RGCGCY | 5 cut(s) | 421, 782, 868, 914, 1588 |
| BfuAI | ACCTGC | 1 cut(s) | 714 |
| BfuI | GTATCC | 1 cut(s) | 472 |
| BlpI | GCTNAGC | 2 cut(s) | 1400, 2523 |
| BmcAI | AGTACT | 1 cut(s) | 1190 |
| Bme18I | GGWCC | 4 cut(s) | 815, 1309, 1570, 2125 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 943 |
| BmeT110I | CYCGRG | 2 cut(s) | 1637, 2482 |
| BmgBI | CACGTC | 1 cut(s) | 362 |
| BmrI | ACTGGG | 2 cut(s) | 1799, 2601 |
| BmsI | GCATC | 6 cut(s) | 741, 1098, 2023, 2331, 2373, 2662 |
| BmuI | ACTGGG | 2 cut(s) | 1799, 2601 |
| BoxI | GACNNNNGTC | 1 cut(s) | 1829 |
| BpiI | GAAGAC | 2 cut(s) | 124, 1376 |
| BpmI | CTGGAG | 5 cut(s) | 549, 1355, 1585, 1826, 2093 |
| Bpu10I | CCTNAGC | 3 cut(s) | 1931, 2232, 2326 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 1400, 2523 |
| BpuMI | CCSGG | 5 cut(s) | 585, 1141, 1269, 1630, 2129 |
| BsaAI | YACGTR | 2 cut(s) | 67, 859 |
| BsaHI | GRCGYC | 4 cut(s) | 1507, 1901, 1992, 2531 |
| BsaWI | WCCGGW | 5 cut(s) | 39, 364, 576, 803, 1594 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 989, 1019, 1328, 1358, 2679, 2709 |
| Bse118I | RCCGGY | 3 cut(s) | 1487, 2318, 2386 |
| Bse21I | CCTNAGG | 2 cut(s) | 932, 1671 |
| Bse3DI | GCAATG | 2 cut(s) | 969, 1311 |
| BseAI | TCCGGA | 2 cut(s) | 39, 364 |
| BseGI | GGATG | 6 cut(s) | 543, 576, 1032, 2399, 2593, 2647 |
| BseMI | GCAATG | 2 cut(s) | 969, 1311 |
| BseMII | CTCAG | 8 cut(s) | 907, 923, 1391, 1662, 1922, 2223, 2535, 2537 |
| BseRI | GAGGAG | 5 cut(s) | 428, 632, 842, 1124, 1628 |
| BseSI | GKGCMC | 4 cut(s) | 660, 755, 1636, 2299 |
| BseYI | CCCAGC | 2 cut(s) | 1556, 2558 |
| BsgI | GTGCAG | 1 cut(s) | 1421 |
| Bsh1285I | CGRYCG | 4 cut(s) | 822, 1823, 1827, 2391 |
| BshNI | GGYRCC | 3 cut(s) | 697, 2067, 2321 |
| BsiEI | CGRYCG | 4 cut(s) | 822, 1823, 1827, 2391 |
| BsiHKAI | GWGCWC | 1 cut(s) | 660 |
| BsiHKCI | CYCGRG | 2 cut(s) | 1637, 2482 |
| BslFI | GGGAC | 8 cut(s) | 950, 1510, 1973, 2098, 2138, 2201, 2536, 2595 |
| BsmAI | GTCTC | 2 cut(s) | 1136, 1253 |
| BsmBI | CGTCTC | 1 cut(s) | 1136 |
| BsmFI | GGGAC | 8 cut(s) | 950, 1510, 1973, 2098, 2138, 2201, 2536, 2595 |
| BsoBI | CYCGRG | 2 cut(s) | 1637, 2482 |
| Bsp120I | GGGCCC | 1 cut(s) | 1632 |
| Bsp1286I | GDGCHC | 6 cut(s) | 660, 755, 1406, 1636, 2299, 2479 |
| Bsp13I | TCCGGA | 2 cut(s) | 39, 364 |
| Bsp1407I | TGTACA | 1 cut(s) | 1474 |
| Bsp143I | GATC | 5 cut(s) | 122, 711, 921, 2193, 2601 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 1400, 2523 |
| BspCNI | CTCAG | 8 cut(s) | 906, 924, 1392, 1663, 1923, 2224, 2536, 2536 |
| BspEI | TCCGGA | 2 cut(s) | 39, 364 |
| BspMAI | CTGCAG | 4 cut(s) | 639, 711, 1956, 2349 |
| BspMI | ACCTGC | 1 cut(s) | 714 |
| BspPI | GGATC | 2 cut(s) | 706, 2596 |
| BspT107I | GGYRCC | 3 cut(s) | 697, 2067, 2321 |
| BsrBI | CCGCTC | 7 cut(s) | 1040, 1710, 1924, 2065, 2086, 2481, 2643 |
| BsrDI | GCAATG | 2 cut(s) | 969, 1311 |
| BsrFI | RCCGGY | 3 cut(s) | 1487, 2318, 2386 |
| BsrGI | TGTACA | 1 cut(s) | 1474 |
| BssAI | RCCGGY | 3 cut(s) | 1487, 2318, 2386 |
| BssMI | GATC | 5 cut(s) | 122, 711, 921, 2193, 2601 |
| BssNI | GRCGYC | 4 cut(s) | 1507, 1901, 1992, 2531 |
| BssSI | CACGAG | 4 cut(s) | 221, 659, 1062, 1883 |
| BssT1I | CCWWGG | 3 cut(s) | 2094, 2403, 2620 |
| Bst2BI | CACGAG | 4 cut(s) | 221, 659, 1062, 1883 |
| Bst4CI | ACNGT | 9 cut(s) | 52, 157, 172, 613, 823, 1313, 1754, 2431, 2596 |
| Bst6I | CTCTTC | 2 cut(s) | 1065, 1605 |
| BstACI | GRCGYC | 4 cut(s) | 1507, 1901, 1992, 2531 |
| BstAUI | TGTACA | 1 cut(s) | 1474 |
| BstBAI | YACGTR | 2 cut(s) | 67, 859 |
| BstDEI | CTNAG | 9 cut(s) | 893, 932, 1400, 1671, 1931, 2232, 2326, 2523, 2544 |
| BstDSI | CCRYGG | 6 cut(s) | 332, 651, 822, 975, 1419, 2247 |
| BstEII | GGTNACC | 2 cut(s) | 1624, 2131 |
| BstF5I | GGATG | 6 cut(s) | 543, 576, 1032, 2399, 2593, 2647 |
| BstH2I | RGCGCY | 5 cut(s) | 421, 782, 868, 914, 1588 |
| BstKTI | GATC | 5 cut(s) | 125, 714, 924, 2196, 2604 |
| BstMAI | GTCTC | 2 cut(s) | 1136, 1253 |
| BstMBI | GATC | 5 cut(s) | 122, 711, 921, 2193, 2601 |
| BstMCI | CGRYCG | 4 cut(s) | 822, 1823, 1827, 2391 |
| BstNSI | RCATGY | 2 cut(s) | 1210, 2113 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 1829 |
| BstPI | GGTNACC | 2 cut(s) | 1624, 2131 |
| BstSFI | CTRYAG | 6 cut(s) | 51, 320, 635, 707, 1952, 2345 |
| BstSLI | GKGCMC | 4 cut(s) | 660, 755, 1636, 2299 |
| BstV2I | GAAGAC | 2 cut(s) | 124, 1376 |
| BstX2I | RGATCY | 2 cut(s) | 711, 2601 |
| BstYI | RGATCY | 2 cut(s) | 711, 2601 |
| Bsu36I | CCTNAGG | 2 cut(s) | 932, 1671 |
| BsuI | GTATCC | 1 cut(s) | 472 |
| BtgI | CCRYGG | 6 cut(s) | 332, 651, 822, 975, 1419, 2247 |
| BtgZI | GCGATG | 2 cut(s) | 718, 2037 |
| BtrI | CACGTC | 1 cut(s) | 362 |
| BtsCI | GGATG | 6 cut(s) | 543, 576, 1032, 2399, 2593, 2647 |
| BtsI | GCAGTG | 1 cut(s) | 1383 |
| BtsIMutI | CAGTG | 6 cut(s) | 168, 1383, 1609, 2297, 2457, 2671 |
| BveI | ACCTGC | 1 cut(s) | 714 |
| Cfr10I | RCCGGY | 3 cut(s) | 1487, 2318, 2386 |
| Cfr42I | CCGCGG | 2 cut(s) | 654, 2250 |
| CseI | GACGC | 8 cut(s) | 254, 345, 590, 1298, 1405, 1496, 1890, 2539 |
| CviAII | CATG | 6 cut(s) | 410, 1057, 1207, 1432, 2110, 2465 |
| DdeI | CTNAG | 9 cut(s) | 893, 932, 1400, 1671, 1931, 2232, 2326, 2523, 2544 |
| DpnI | GATC | 5 cut(s) | 124, 713, 923, 2195, 2603 |
| DpnII | GATC | 5 cut(s) | 122, 711, 921, 2193, 2601 |
| DraIII | CACNNNGTG | 1 cut(s) | 1143 |
| DriI | GACNNNNNGTC | 1 cut(s) | 943 |
| EaeI | YGGCCR | 3 cut(s) | 2055, 2178, 2461 |
| Eam1104I | CTCTTC | 2 cut(s) | 1065, 1605 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 943 |
| EarI | CTCTTC | 2 cut(s) | 1065, 1605 |
| EciI | GGCGGA | 8 cut(s) | 254, 594, 1120, 1656, 2114, 2297, 2403, 2600 |
| Eco130I | CCWWGG | 3 cut(s) | 2094, 2403, 2620 |
| Eco24I | GRGCYC | 3 cut(s) | 1406, 1636, 2479 |
| Eco47I | GGWCC | 4 cut(s) | 815, 1309, 1570, 2125 |
| Eco57I | CTGAAG | 6 cut(s) | 584, 1338, 1559, 1831, 2147, 2697 |
| Eco72I | CACGTG | 1 cut(s) | 67 |
| Eco81I | CCTNAGG | 2 cut(s) | 932, 1671 |
| Eco88I | CYCGRG | 2 cut(s) | 1637, 2482 |
| Eco91I | GGTNACC | 2 cut(s) | 1624, 2131 |
| EcoO109I | RGGNCCY | 3 cut(s) | 1570, 1632, 1633 |
| EcoO65I | GGTNACC | 2 cut(s) | 1624, 2131 |
| EcoRI | GAATTC | 1 cut(s) | 2504 |
| EcoT14I | CCWWGG | 3 cut(s) | 2094, 2403, 2620 |
| EcoT22I | ATGCAT | 1 cut(s) | 1212 |
| EcoT38I | GRGCYC | 3 cut(s) | 1406, 1636, 2479 |
| ErhI | CCWWGG | 3 cut(s) | 2094, 2403, 2620 |
| Esp3I | CGTCTC | 1 cut(s) | 1136 |
| FaeI | CATG | 6 cut(s) | 413, 1060, 1210, 1435, 2113, 2468 |
| FaqI | GGGAC | 8 cut(s) | 950, 1510, 1973, 2098, 2138, 2201, 2536, 2595 |
| FatI | CATG | 6 cut(s) | 409, 1056, 1206, 1431, 2109, 2464 |
| FblI | GTMKAC | 1 cut(s) | 1823 |
| FokI | GGATG | 6 cut(s) | 550, 583, 1019, 2386, 2600, 2634 |
| FriOI | GRGCYC | 3 cut(s) | 1406, 1636, 2479 |
| FspBI | CTAG | 4 cut(s) | 141, 305, 2204, 2220 |
| GsaI | CCCAGC | 2 cut(s) | 1560, 2562 |
| GsuI | CTGGAG | 5 cut(s) | 549, 1355, 1585, 1826, 2093 |
| HaeII | RGCGCY | 5 cut(s) | 421, 782, 868, 914, 1588 |
| HgaI | GACGC | 8 cut(s) | 254, 345, 590, 1298, 1405, 1496, 1890, 2539 |
| Hin1I | GRCGYC | 4 cut(s) | 1507, 1901, 1992, 2531 |
| Hin1II | CATG | 6 cut(s) | 413, 1060, 1210, 1435, 2113, 2468 |
| HincII | GTYRAC | 6 cut(s) | 520, 556, 889, 1592, 1824, 2701 |
| HindII | GTYRAC | 6 cut(s) | 520, 556, 889, 1592, 1824, 2701 |
| HindIII | AAGCTT | 1 cut(s) | 624 |
| HphI | GGTGA | 9 cut(s) | 604, 1129, 1469, 1618, 1766, 1766, 2143, 2222, 2513 |
| Hpy188I | TCNGA | 8 cut(s) | 84, 161, 1021, 1037, 1094, 1411, 2545, 2629 |
| Hpy188III | TCNNGA | 6 cut(s) | 40, 365, 925, 1064, 1297, 1805 |
| Hpy99I | CGWCG | 9 cut(s) | 28, 613, 903, 1006, 1292, 1512, 1754, 1997, 2021 |
| HpyCH4III | ACNGT | 9 cut(s) | 52, 157, 172, 613, 823, 1313, 1754, 2431, 2596 |
| HpyCH4IV | ACGT | 8 cut(s) | 26, 66, 361, 858, 1004, 1866, 1992, 2052 |
| HpyF3I | CTNAG | 9 cut(s) | 893, 932, 1400, 1671, 1931, 2232, 2326, 2523, 2544 |
| HpySE526I | ACGT | 8 cut(s) | 26, 66, 361, 858, 1004, 1866, 1992, 2052 |
| Hsp92I | GRCGYC | 4 cut(s) | 1507, 1901, 1992, 2531 |
| Hsp92II | CATG | 6 cut(s) | 413, 1060, 1210, 1435, 2113, 2468 |
| Kpn2I | TCCGGA | 2 cut(s) | 39, 364 |
| KroI | GCCGGC | 1 cut(s) | 1487 |
| KroNI | GCCGGC | 1 cut(s) | 1489 |
| KspI | CCGCGG | 2 cut(s) | 654, 2250 |
| Kzo9I | GATC | 5 cut(s) | 122, 711, 921, 2193, 2601 |
| LweI | GCATC | 6 cut(s) | 741, 1098, 2023, 2331, 2373, 2662 |
| MaeI | CTAG | 4 cut(s) | 141, 305, 2204, 2220 |
| MaeII | ACGT | 8 cut(s) | 26, 66, 361, 858, 1004, 1866, 1992, 2052 |
| MaeIII | GTNAC | 7 cut(s) | 13, 46, 357, 682, 1457, 1624, 2131 |
| MalI | GATC | 5 cut(s) | 124, 713, 923, 2195, 2603 |
| MbiI | CCGCTC | 7 cut(s) | 1040, 1710, 1924, 2065, 2086, 2481, 2643 |
| MboI | GATC | 5 cut(s) | 122, 711, 921, 2193, 2601 |
| MboII | GAAGA | 7 cut(s) | 129, 350, 1082, 1381, 1622, 1660, 2158 |
| MflI | RGATCY | 2 cut(s) | 711, 2601 |
| MhlI | GDGCHC | 6 cut(s) | 660, 755, 1406, 1636, 2299, 2479 |
| MlsI | TGGCCA | 2 cut(s) | 2057, 2463 |
| MluCI | AATT | 5 cut(s) | 184, 247, 1011, 1327, 2504 |
| MluI | ACGCGT | 1 cut(s) | 1172 |
| MluNI | TGGCCA | 2 cut(s) | 2057, 2463 |
| MlyI | GAGTC | 8 cut(s) | 251, 494, 932, 1054, 1255, 1592, 1872, 2180 |
| MmeI | TCCRAC | 2 cut(s) | 999, 1855 |
| Mox20I | TGGCCA | 2 cut(s) | 2057, 2463 |
| Mph1103I | ATGCAT | 1 cut(s) | 1212 |
| MroI | TCCGGA | 2 cut(s) | 39, 364 |
| MroNI | GCCGGC | 1 cut(s) | 1487 |
| MroXI | GAANNNNTTC | 1 cut(s) | 2160 |
| MscI | TGGCCA | 2 cut(s) | 2057, 2463 |
| MseI | TTAA | 3 cut(s) | 35, 174, 1014 |
| Msp20I | TGGCCA | 2 cut(s) | 2057, 2463 |
| NaeI | GCCGGC | 1 cut(s) | 1489 |
| NciI | CCSGG | 5 cut(s) | 585, 1141, 1269, 1630, 2129 |
| NdeII | GATC | 5 cut(s) | 122, 711, 921, 2193, 2601 |
| NgoMIV | GCCGGC | 1 cut(s) | 1487 |
| NlaIII | CATG | 6 cut(s) | 413, 1060, 1210, 1435, 2113, 2468 |
| NmeAIII | GCCGAG | 1 cut(s) | 1762 |
| NmuCI | GTSAC | 5 cut(s) | 357, 682, 1457, 1624, 2131 |
| NsiI | ATGCAT | 1 cut(s) | 1212 |
| NspI | RCATGY | 2 cut(s) | 1210, 2113 |
| PaeI | GCATGC | 1 cut(s) | 1210 |
| PaeR7I | CTCGAG | 1 cut(s) | 1637 |
| PciI | ACATGT | 1 cut(s) | 2109 |
| PcsI | WCGNNNNNNNCGW | 4 cut(s) | 109, 266, 358, 1703 |
| PdiI | GCCGGC | 1 cut(s) | 1489 |
| PdmI | GAANNNNTTC | 1 cut(s) | 2160 |
| PfeI | GAWTC | 4 cut(s) | 1108, 1718, 1838, 2264 |
| PflMI | CCANNNNNTGG | 4 cut(s) | 333, 762, 2367, 2581 |
| PfoI | TCCNGGA | 1 cut(s) | 1332 |
| PleI | GAGTC | 8 cut(s) | 251, 493, 932, 1054, 1255, 1592, 1872, 2179 |
| PmaCI | CACGTG | 1 cut(s) | 67 |
| PmlI | CACGTG | 1 cut(s) | 67 |
| PpsI | GAGTC | 8 cut(s) | 251, 493, 932, 1054, 1255, 1592, 1872, 2179 |
| Ppu21I | YACGTR | 2 cut(s) | 67, 859 |
| PpuMI | RGGWCCY | 1 cut(s) | 1570 |
| PscI | ACATGT | 1 cut(s) | 2109 |
| PshAI | GACNNNNGTC | 1 cut(s) | 1829 |
| Psp5II | RGGWCCY | 1 cut(s) | 1570 |
| PspCI | CACGTG | 1 cut(s) | 67 |
| PspEI | GGTNACC | 2 cut(s) | 1624, 2131 |
| PspFI | CCCAGC | 2 cut(s) | 1556, 2558 |
| PspOMI | GGGCCC | 1 cut(s) | 1632 |
| PspPPI | RGGWCCY | 1 cut(s) | 1570 |
| PspXI | VCTCGAGB | 1 cut(s) | 1637 |
| PstI | CTGCAG | 4 cut(s) | 639, 711, 1956, 2349 |
| PsuI | RGATCY | 2 cut(s) | 711, 2601 |
| SacII | CCGCGG | 2 cut(s) | 654, 2250 |
| SalI | GTCGAC | 1 cut(s) | 1822 |
| SaqAI | TTAA | 3 cut(s) | 35, 174, 1014 |
| Sau3AI | GATC | 5 cut(s) | 122, 711, 921, 2193, 2601 |
| SbfI | CCTGCAGG | 1 cut(s) | 639 |
| ScaI | AGTACT | 1 cut(s) | 1190 |
| SchI | GAGTC | 8 cut(s) | 251, 494, 932, 1054, 1255, 1592, 1872, 2180 |
| SdaI | CCTGCAGG | 1 cut(s) | 639 |
| SduI | GDGCHC | 6 cut(s) | 660, 755, 1406, 1636, 2299, 2479 |
| SfaNI | GCATC | 6 cut(s) | 741, 1098, 2023, 2331, 2373, 2662 |
| SfcI | CTRYAG | 6 cut(s) | 51, 320, 635, 707, 1952, 2345 |
| Sfr274I | CTCGAG | 1 cut(s) | 1637 |
| Sfr303I | CCGCGG | 2 cut(s) | 654, 2250 |
| SgrBI | CCGCGG | 2 cut(s) | 654, 2250 |
| SinI | GGWCC | 4 cut(s) | 815, 1309, 1570, 2125 |
| SlaI | CTCGAG | 1 cut(s) | 1637 |
| SmlI | CTYRAG | 1 cut(s) | 1637 |
| SmoI | CTYRAG | 1 cut(s) | 1637 |
| SphI | GCATGC | 1 cut(s) | 1210 |
| Sse8387I | CCTGCAGG | 1 cut(s) | 639 |
| Sse9I | AATT | 5 cut(s) | 184, 247, 1011, 1327, 2504 |
| SspI | AATATT | 1 cut(s) | 669 |
| SspMI | CTAG | 4 cut(s) | 141, 305, 2204, 2220 |
| StyI | CCWWGG | 3 cut(s) | 2094, 2403, 2620 |
| TaaI | ACNGT | 9 cut(s) | 52, 157, 172, 613, 823, 1313, 1754, 2431, 2596 |
| TaiI | ACGT | 8 cut(s) | 29, 69, 364, 861, 1007, 1869, 1995, 2055 |
| TaqI | TCGA | 9 cut(s) | 312, 501, 846, 924, 941, 1638, 1823, 1995, 2381 |
| TaqII | GACCGA | 3 cut(s) | 832, 1809, 2318 |
| TasI | AATT | 5 cut(s) | 184, 247, 1011, 1327, 2504 |
| TatI | WGTACW | 5 cut(s) | 1188, 1200, 1474, 1850, 2286 |
| TfiI | GAWTC | 4 cut(s) | 1108, 1718, 1838, 2264 |
| Tru1I | TTAA | 3 cut(s) | 35, 174, 1014 |
| Tru9I | TTAA | 3 cut(s) | 35, 174, 1014 |
| TscAI | CASTG | 6 cut(s) | 175, 1383, 1609, 2304, 2464, 2671 |
| TseFI | GTSAC | 5 cut(s) | 357, 682, 1457, 1624, 2131 |
| Tsp45I | GTSAC | 5 cut(s) | 357, 682, 1457, 1624, 2131 |
| TspDTI | ATGAA | 2 cut(s) | 195, 1710 |
| TspGWI | ACGGA | 5 cut(s) | 114, 258, 321, 1118, 1712 |
| TspRI | CASTG | 6 cut(s) | 175, 1383, 1609, 2304, 2464, 2671 |
| Van91I | CCANNNNNTGG | 4 cut(s) | 333, 762, 2367, 2581 |
| VneI | GTGCAC | 1 cut(s) | 656 |
| VpaK11BI | GGWCC | 4 cut(s) | 815, 1309, 1570, 2125 |
| XapI | RAATTY | 2 cut(s) | 247, 2504 |
| XceI | RCATGY | 2 cut(s) | 1210, 2113 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1448 |
| XhoI | CTCGAG | 1 cut(s) | 1637 |
| XmiI | GTMKAC | 1 cut(s) | 1823 |
| XmnI | GAANNNNTTC | 1 cut(s) | 2160 |
| XspI | CTAG | 4 cut(s) | 141, 305, 2204, 2220 |
| ZraI | GACGTC | 1 cut(s) | 1993 |
| ZrmI | AGTACT | 1 cut(s) | 1190 |
| Zsp2I | ATGCAT | 1 cut(s) | 1212 |