No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 741 |
| AccB1I | GGYRCC | 3 cut(s) | 400, 764, 854 |
| AccBSI | CCGCTC | 3 cut(s) | 148, 463, 703 |
| AccII | CGCG | 4 cut(s) | 523, 734, 744, 1006 |
| AcoI | YGGCCR | 3 cut(s) | 41, 157, 711 |
| AcsI | RAATTY | 1 cut(s) | 645 |
| AcuI | CTGAAG | 3 cut(s) | 535, 773, 1071 |
| AcvI | CACGTG | 1 cut(s) | 941 |
| AcyI | GRCGYC | 4 cut(s) | 401, 605, 738, 765 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 19, 178, 255, 625, 851, 896 |
| AgsI | TTSAA | 1 cut(s) | 650 |
| AjnI | CCWGG | 1 cut(s) | 154 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 458, 490 |
| AluBI | AGCT | 5 cut(s) | 101, 131, 368, 418, 555 |
| AluI | AGCT | 5 cut(s) | 101, 131, 368, 418, 555 |
| Alw26I | GTCTC | 3 cut(s) | 659, 821, 980 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 619 |
| Ama87I | CYCGRG | 1 cut(s) | 966 |
| AoxI | GGCC | 7 cut(s) | 41, 157, 169, 339, 357, 711, 1069 |
| ApeKI | GCWGC | 5 cut(s) | 101, 128, 136, 613, 867 |
| ApoI | RAATTY | 1 cut(s) | 645 |
| AspLEI | GCGC | 7 cut(s) | 7, 403, 525, 767, 884, 961, 1006 |
| AspS9I | GGNCC | 6 cut(s) | 170, 246, 339, 358, 900, 1011 |
| AsuC2I | CCSGG | 2 cut(s) | 967, 968 |
| AsuHPI | GGTGA | 5 cut(s) | 74, 244, 250, 343, 470 |
| AsuII | TTCGAA | 1 cut(s) | 374 |
| AvaI | CYCGRG | 1 cut(s) | 966 |
| AvaII | GGWCC | 3 cut(s) | 246, 900, 1011 |
| BaeGI | GKGCMC | 1 cut(s) | 859 |
| BalI | TGGCCA | 2 cut(s) | 159, 713 |
| BanI | GGYRCC | 3 cut(s) | 400, 764, 854 |
| BbrPI | CACGTG | 1 cut(s) | 941 |
| BbvI | GCAGC | 5 cut(s) | 88, 140, 148, 625, 879 |
| BccI | CCATC | 5 cut(s) | 62, 63, 449, 486, 934 |
| BceAI | ACGGC | 4 cut(s) | 392, 506, 546, 782 |
| BciT130I | CCWGG | 1 cut(s) | 156 |
| BciVI | GTATCC | 1 cut(s) | 827 |
| BcnI | CCSGG | 2 cut(s) | 967, 968 |
| BcoDI | GTCTC | 3 cut(s) | 659, 821, 980 |
| BfaI | CTAG | 1 cut(s) | 993 |
| BfoI | RGCGCY | 3 cut(s) | 8, 404, 768 |
| BfuI | GTATCC | 1 cut(s) | 827 |
| BlpI | GCTNAGC | 1 cut(s) | 8 |
| Bme1390I | CCNGG | 3 cut(s) | 156, 967, 968 |
| Bme18I | GGWCC | 3 cut(s) | 246, 900, 1011 |
| BmeT110I | CYCGRG | 1 cut(s) | 966 |
| BmgT120I | GGNCC | 6 cut(s) | 170, 246, 339, 358, 900, 1011 |
| BmiI | GGNNCC | 9 cut(s) | 24, 225, 340, 402, 766, 856, 901, 902, 1012 |
| BmrFI | CCNGG | 3 cut(s) | 156, 967, 968 |
| BmsI | GCATC | 1 cut(s) | 141 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 407, 439 |
| BpmI | CTGGAG | 2 cut(s) | 641, 870 |
| Bpu10I | CCTNAGC | 1 cut(s) | 215 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 8 |
| Bpu14I | TTCGAA | 1 cut(s) | 374 |
| BpuEI | CTTGAG | 1 cut(s) | 81 |
| BpuMI | CCSGG | 2 cut(s) | 967, 968 |
| Bsa29I | ATCGAT | 1 cut(s) | 1031 |
| BsaAI | YACGTR | 1 cut(s) | 941 |
| BsaHI | GRCGYC | 4 cut(s) | 401, 605, 738, 765 |
| BsaI | GGTCTC | 2 cut(s) | 659, 980 |
| BsaJI | CCNNGG | 4 cut(s) | 306, 528, 714, 966 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 458, 488 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 19, 178, 255, 625, 851, 896 |
| Bse118I | RCCGGY | 4 cut(s) | 76, 104, 229, 285 |
| Bse1I | ACTGG | 3 cut(s) | 13, 49, 693 |
| BseBI | CCWGG | 1 cut(s) | 156 |
| BseCI | ATCGAT | 1 cut(s) | 1031 |
| BseDI | CCNNGG | 4 cut(s) | 306, 528, 714, 966 |
| BseGI | GGATG | 3 cut(s) | 73, 156, 886 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 19, 178, 255, 625, 851, 896 |
| BseMII | CTCAG | 3 cut(s) | 9, 801, 876 |
| BseNI | ACTGG | 3 cut(s) | 13, 49, 693 |
| BseRI | GAGGAG | 1 cut(s) | 335 |
| BseSI | GKGCMC | 1 cut(s) | 859 |
| BseXI | GCAGC | 5 cut(s) | 88, 140, 148, 625, 879 |
| BseYI | CCCAGC | 4 cut(s) | 131, 254, 789, 903 |
| BsgI | GTGCAG | 2 cut(s) | 104, 569 |
| Bsh1236I | CGCG | 4 cut(s) | 523, 734, 744, 1006 |
| BshFI | GGCC | 7 cut(s) | 43, 159, 171, 341, 359, 713, 1071 |
| BshNI | GGYRCC | 3 cut(s) | 400, 764, 854 |
| BshVI | ATCGAT | 1 cut(s) | 1031 |
| BsiHKCI | CYCGRG | 1 cut(s) | 966 |
| BsiSI | CCGG | 7 cut(s) | 77, 105, 230, 286, 824, 890, 967 |
| BslFI | GGGAC | 5 cut(s) | 37, 106, 594, 772, 886 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 19, 178, 255, 625, 851, 896 |
| BsmAI | GTCTC | 3 cut(s) | 659, 821, 980 |
| BsmFI | GGGAC | 5 cut(s) | 37, 106, 594, 772, 886 |
| BsnI | GGCC | 7 cut(s) | 43, 159, 171, 341, 359, 713, 1071 |
| Bso31I | GGTCTC | 2 cut(s) | 659, 980 |
| BsoBI | CYCGRG | 1 cut(s) | 966 |
| Bsp119I | TTCGAA | 1 cut(s) | 374 |
| Bsp1286I | GDGCHC | 1 cut(s) | 859 |
| Bsp143I | GATC | 2 cut(s) | 333, 1015 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 8 |
| BspANI | GGCC | 7 cut(s) | 43, 159, 171, 341, 359, 713, 1071 |
| BspCNI | CTCAG | 3 cut(s) | 10, 802, 875 |
| BspDI | ATCGAT | 1 cut(s) | 1031 |
| BspFNI | CGCG | 4 cut(s) | 523, 734, 744, 1006 |
| BspHI | TCATGA | 1 cut(s) | 447 |
| BspLI | GGNNCC | 9 cut(s) | 24, 225, 340, 402, 766, 856, 901, 902, 1012 |
| BspT104I | TTCGAA | 1 cut(s) | 374 |
| BspT107I | GGYRCC | 3 cut(s) | 400, 764, 854 |
| BspTNI | GGTCTC | 2 cut(s) | 659, 980 |
| BsrBI | CCGCTC | 3 cut(s) | 148, 463, 703 |
| BsrFI | RCCGGY | 4 cut(s) | 76, 104, 229, 285 |
| BsrI | ACTGG | 3 cut(s) | 13, 49, 693 |
| BssAI | RCCGGY | 4 cut(s) | 76, 104, 229, 285 |
| BssECI | CCNNGG | 4 cut(s) | 306, 528, 714, 966 |
| BssMI | GATC | 2 cut(s) | 333, 1015 |
| BssNI | GRCGYC | 4 cut(s) | 401, 605, 738, 765 |
| BssT1I | CCWWGG | 1 cut(s) | 714 |
| Bst2UI | CCWGG | 1 cut(s) | 156 |
| Bst4CI | ACNGT | 2 cut(s) | 211, 382 |
| Bst6I | CTCTTC | 1 cut(s) | 306 |
| BstACI | GRCGYC | 4 cut(s) | 401, 605, 738, 765 |
| BstBAI | YACGTR | 1 cut(s) | 941 |
| BstBI | TTCGAA | 1 cut(s) | 374 |
| BstDEI | CTNAG | 5 cut(s) | 8, 18, 215, 810, 862 |
| BstDSI | CCRYGG | 1 cut(s) | 528 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 623 |
| BstF5I | GGATG | 3 cut(s) | 73, 156, 886 |
| BstFNI | CGCG | 4 cut(s) | 523, 734, 744, 1006 |
| BstH2I | RGCGCY | 3 cut(s) | 8, 404, 768 |
| BstHHI | GCGC | 7 cut(s) | 7, 403, 525, 767, 884, 961, 1006 |
| BstKTI | GATC | 2 cut(s) | 336, 1018 |
| BstMAI | GTCTC | 3 cut(s) | 659, 821, 980 |
| BstMBI | GATC | 2 cut(s) | 333, 1015 |
| BstMWI | GCNNNNNNNGC | 9 cut(s) | 40, 43, 82, 145, 365, 437, 799, 854, 890 |
| BstNI | CCWGG | 1 cut(s) | 156 |
| BstSCI | CCNGG | 3 cut(s) | 154, 965, 966 |
| BstSLI | GKGCMC | 1 cut(s) | 859 |
| BstUI | CGCG | 4 cut(s) | 523, 734, 744, 1006 |
| BstV1I | GCAGC | 5 cut(s) | 88, 140, 148, 625, 879 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 167 |
| Bsu15I | ATCGAT | 1 cut(s) | 1031 |
| BsuI | GTATCC | 1 cut(s) | 827 |
| BsuRI | GGCC | 7 cut(s) | 43, 159, 171, 341, 359, 713, 1071 |
| BsuTUI | ATCGAT | 1 cut(s) | 1031 |
| BtgI | CCRYGG | 1 cut(s) | 528 |
| BtsCI | GGATG | 3 cut(s) | 73, 156, 886 |
| BtsI | GCAGTG | 1 cut(s) | 249 |
| BtsIMutI | CAGTG | 2 cut(s) | 207, 249 |
| CaiI | CAGNNNCTG | 1 cut(s) | 619 |
| CciI | TCATGA | 1 cut(s) | 447 |
| CfoI | GCGC | 7 cut(s) | 7, 403, 525, 767, 884, 961, 1006 |
| Cfr10I | RCCGGY | 4 cut(s) | 76, 104, 229, 285 |
| Cfr13I | GGNCC | 6 cut(s) | 170, 246, 339, 358, 900, 1011 |
| Cfr9I | CCCGGG | 1 cut(s) | 966 |
| ClaI | ATCGAT | 1 cut(s) | 1031 |
| CseI | GACGC | 2 cut(s) | 594, 774 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 517, 552 |
| CviAII | CATG | 2 cut(s) | 448, 637 |
| DdeI | CTNAG | 5 cut(s) | 8, 18, 215, 810, 862 |
| DinI | GGCGCC | 2 cut(s) | 402, 766 |
| DpnI | GATC | 2 cut(s) | 335, 1017 |
| DpnII | GATC | 2 cut(s) | 333, 1015 |
| EaeI | YGGCCR | 3 cut(s) | 41, 157, 711 |
| Eam1104I | CTCTTC | 1 cut(s) | 306 |
| EarI | CTCTTC | 1 cut(s) | 306 |
| EciI | GGCGGA | 2 cut(s) | 707, 734 |
| Eco130I | CCWWGG | 1 cut(s) | 714 |
| Eco31I | GGTCTC | 2 cut(s) | 659, 980 |
| Eco47I | GGWCC | 3 cut(s) | 246, 900, 1011 |
| Eco57I | CTGAAG | 3 cut(s) | 535, 773, 1071 |
| Eco72I | CACGTG | 1 cut(s) | 941 |
| Eco88I | CYCGRG | 1 cut(s) | 966 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 623 |
| EcoO109I | RGGNCCY | 2 cut(s) | 339, 900 |
| EcoRII | CCWGG | 1 cut(s) | 154 |
| EcoT14I | CCWWGG | 1 cut(s) | 714 |
| EgeI | GGCGCC | 2 cut(s) | 402, 766 |
| EheI | GGCGCC | 2 cut(s) | 402, 766 |
| ErhI | CCWWGG | 1 cut(s) | 714 |
| FaeI | CATG | 2 cut(s) | 451, 640 |
| FaiI | YATR | 7 cut(s) | 438, 449, 484, 593, 638, 749, 983 |
| FaqI | GGGAC | 5 cut(s) | 37, 106, 594, 772, 886 |
| FatI | CATG | 2 cut(s) | 447, 636 |
| FauI | CCCGC | 9 cut(s) | 101, 310, 412, 456, 486, 505, 571, 828, 853 |
| FokI | GGATG | 3 cut(s) | 80, 163, 873 |
| FspBI | CTAG | 1 cut(s) | 993 |
| GlaI | GCGC | 7 cut(s) | 6, 402, 524, 766, 883, 960, 1005 |
| GsaI | CCCAGC | 4 cut(s) | 135, 258, 793, 907 |
| GsuI | CTGGAG | 2 cut(s) | 641, 870 |
| HaeII | RGCGCY | 3 cut(s) | 8, 404, 768 |
| HaeIII | GGCC | 7 cut(s) | 43, 159, 171, 341, 359, 713, 1071 |
| HapII | CCGG | 7 cut(s) | 77, 105, 230, 286, 824, 890, 967 |
| HgaI | GACGC | 2 cut(s) | 594, 774 |
| HhaI | GCGC | 7 cut(s) | 7, 403, 525, 767, 884, 961, 1006 |
| Hin1I | GRCGYC | 4 cut(s) | 401, 605, 738, 765 |
| Hin1II | CATG | 2 cut(s) | 451, 640 |
| Hin6I | GCGC | 7 cut(s) | 5, 401, 523, 765, 882, 959, 1004 |
| HinP1I | GCGC | 7 cut(s) | 5, 401, 523, 765, 882, 959, 1004 |
| HincII | GTYRAC | 2 cut(s) | 263, 569 |
| HindII | GTYRAC | 2 cut(s) | 263, 569 |
| HinfI | GANTC | 6 cut(s) | 94, 259, 296, 422, 910, 1024 |
| HpaII | CCGG | 7 cut(s) | 77, 105, 230, 286, 824, 890, 967 |
| HphI | GGTGA | 5 cut(s) | 74, 244, 250, 343, 470 |
| Hpy166II | GTNNAC | 2 cut(s) | 263, 569 |
| Hpy188I | TCNGA | 3 cut(s) | 19, 931, 1015 |
| Hpy188III | TCNNGA | 2 cut(s) | 448, 658 |
| Hpy8I | GTNNAC | 2 cut(s) | 263, 569 |
| Hpy99I | CGWCG | 1 cut(s) | 610 |
| HpyAV | CCTTC | 7 cut(s) | 136, 349, 381, 559, 673, 890, 1061 |
| HpyCH4III | ACNGT | 2 cut(s) | 211, 382 |
| HpyCH4IV | ACGT | 2 cut(s) | 738, 940 |
| HpyCH4V | TGCA | 4 cut(s) | 85, 128, 190, 586 |
| HpyF10VI | GCNNNNNNNGC | 9 cut(s) | 40, 43, 82, 145, 365, 437, 799, 854, 890 |
| HpyF3I | CTNAG | 5 cut(s) | 8, 18, 215, 810, 862 |
| HpySE526I | ACGT | 2 cut(s) | 738, 940 |
| Hsp92I | GRCGYC | 4 cut(s) | 401, 605, 738, 765 |
| Hsp92II | CATG | 2 cut(s) | 451, 640 |
| HspAI | GCGC | 7 cut(s) | 5, 401, 523, 765, 882, 959, 1004 |
| KasI | GGCGCC | 2 cut(s) | 400, 764 |
| KflI | GGGWCCC | 1 cut(s) | 900 |
| KroI | GCCGGC | 2 cut(s) | 104, 285 |
| KroNI | GCCGGC | 2 cut(s) | 106, 287 |
| Kzo9I | GATC | 2 cut(s) | 333, 1015 |
| LmnI | GCTCC | 3 cut(s) | 145, 373, 847 |
| Lsp1109I | GCAGC | 5 cut(s) | 88, 140, 148, 625, 879 |
| LweI | GCATC | 1 cut(s) | 141 |
| MaeI | CTAG | 1 cut(s) | 993 |
| MaeII | ACGT | 2 cut(s) | 738, 940 |
| MaeIII | GTNAC | 3 cut(s) | 205, 725, 936 |
| MalI | GATC | 2 cut(s) | 335, 1017 |
| MbiI | CCGCTC | 3 cut(s) | 148, 463, 703 |
| MboI | GATC | 2 cut(s) | 333, 1015 |
| MboII | GAAGA | 5 cut(s) | 323, 364, 766, 769, 1070 |
| MfeI | CAATTG | 1 cut(s) | 534 |
| MhlI | GDGCHC | 1 cut(s) | 859 |
| MlsI | TGGCCA | 2 cut(s) | 159, 713 |
| MluCI | AATT | 2 cut(s) | 534, 645 |
| MluNI | TGGCCA | 2 cut(s) | 159, 713 |
| Mly113I | GGCGCC | 2 cut(s) | 401, 765 |
| MlyI | GAGTC | 5 cut(s) | 88, 268, 416, 904, 1033 |
| MmeI | TCCRAC | 1 cut(s) | 252 |
| Mox20I | TGGCCA | 2 cut(s) | 159, 713 |
| MroNI | GCCGGC | 2 cut(s) | 104, 285 |
| MscI | TGGCCA | 2 cut(s) | 159, 713 |
| MslI | CAYNNNNRTG | 1 cut(s) | 60 |
| Msp20I | TGGCCA | 2 cut(s) | 159, 713 |
| MspA1I | CMGCKG | 3 cut(s) | 131, 197, 848 |
| MspI | CCGG | 7 cut(s) | 77, 105, 230, 286, 824, 890, 967 |
| MspR9I | CCNGG | 3 cut(s) | 156, 967, 968 |
| MunI | CAATTG | 1 cut(s) | 534 |
| MvaI | CCWGG | 1 cut(s) | 156 |
| MvnI | CGCG | 4 cut(s) | 523, 734, 744, 1006 |
| MwoI | GCNNNNNNNGC | 9 cut(s) | 40, 43, 82, 145, 365, 437, 799, 854, 890 |
| NaeI | GCCGGC | 2 cut(s) | 106, 287 |
| NarI | GGCGCC | 2 cut(s) | 401, 765 |
| NciI | CCSGG | 2 cut(s) | 967, 968 |
| NdeII | GATC | 2 cut(s) | 333, 1015 |
| NgoMIV | GCCGGC | 2 cut(s) | 104, 285 |
| NlaIII | CATG | 2 cut(s) | 451, 640 |
| NlaIV | GGNNCC | 9 cut(s) | 24, 225, 340, 402, 766, 856, 901, 902, 1012 |
| NmeAIII | GCCGAG | 3 cut(s) | 331, 457, 536 |
| NmuCI | GTSAC | 3 cut(s) | 205, 725, 936 |
| NspV | TTCGAA | 1 cut(s) | 374 |
| PagI | TCATGA | 1 cut(s) | 447 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 594 |
| PdiI | GCCGGC | 2 cut(s) | 106, 287 |
| PfeI | GAWTC | 1 cut(s) | 296 |
| PflFI | GACNNNGTC | 1 cut(s) | 776 |
| PleI | GAGTC | 5 cut(s) | 88, 267, 416, 904, 1032 |
| PluTI | GGCGCC | 2 cut(s) | 404, 768 |
| PmaCI | CACGTG | 1 cut(s) | 941 |
| PmlI | CACGTG | 1 cut(s) | 941 |
| PpsI | GAGTC | 5 cut(s) | 88, 267, 416, 904, 1032 |
| Ppu21I | YACGTR | 1 cut(s) | 941 |
| PpuMI | RGGWCCY | 1 cut(s) | 900 |
| Psp5II | RGGWCCY | 1 cut(s) | 900 |
| Psp6I | CCWGG | 1 cut(s) | 154 |
| PspCI | CACGTG | 1 cut(s) | 941 |
| PspFI | CCCAGC | 4 cut(s) | 131, 254, 789, 903 |
| PspGI | CCWGG | 1 cut(s) | 154 |
| PspN4I | GGNNCC | 9 cut(s) | 24, 225, 340, 402, 766, 856, 901, 902, 1012 |
| PspPI | GGNCC | 6 cut(s) | 170, 246, 339, 358, 900, 1011 |
| PspPPI | RGGWCCY | 1 cut(s) | 900 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 428, 460 |
| PstNI | CAGNNNCTG | 1 cut(s) | 619 |
| PsyI | GACNNNGTC | 1 cut(s) | 776 |
| PvuII | CAGCTG | 1 cut(s) | 131 |
| RseI | CAYNNNNRTG | 1 cut(s) | 60 |
| Sau3AI | GATC | 2 cut(s) | 333, 1015 |
| Sau96I | GGNCC | 6 cut(s) | 170, 246, 339, 358, 900, 1011 |
| SchI | GAGTC | 5 cut(s) | 88, 268, 416, 904, 1033 |
| ScrFI | CCNGG | 3 cut(s) | 156, 967, 968 |
| SduI | GDGCHC | 1 cut(s) | 859 |
| SfaNI | GCATC | 1 cut(s) | 141 |
| SfoI | GGCGCC | 2 cut(s) | 402, 766 |
| SfuI | TTCGAA | 1 cut(s) | 374 |
| SgrAI | CRCCGGYG | 1 cut(s) | 229 |
| SinI | GGWCC | 3 cut(s) | 246, 900, 1011 |
| SmaI | CCCGGG | 1 cut(s) | 968 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 60 |
| SmlI | CTYRAG | 1 cut(s) | 96 |
| SmoI | CTYRAG | 1 cut(s) | 96 |
| Sse9I | AATT | 2 cut(s) | 534, 645 |
| SspDI | GGCGCC | 2 cut(s) | 400, 764 |
| SspMI | CTAG | 1 cut(s) | 993 |
| StyD4I | CCNGG | 3 cut(s) | 154, 965, 966 |
| StyI | CCWWGG | 1 cut(s) | 714 |
| TaaI | ACNGT | 2 cut(s) | 211, 382 |
| TaiI | ACGT | 2 cut(s) | 741, 943 |
| TaqI | TCGA | 4 cut(s) | 374, 608, 1031, 1065 |
| TasI | AATT | 2 cut(s) | 534, 645 |
| TauI | GCSGC | 9 cut(s) | 37, 46, 443, 605, 706, 709, 805, 959, 1042 |
| TfiI | GAWTC | 1 cut(s) | 296 |
| TscAI | CASTG | 2 cut(s) | 214, 256 |
| TseFI | GTSAC | 3 cut(s) | 205, 725, 936 |
| TseI | GCWGC | 5 cut(s) | 101, 128, 136, 613, 867 |
| Tsp45I | GTSAC | 3 cut(s) | 205, 725, 936 |
| TspDTI | ATGAA | 1 cut(s) | 436 |
| TspMI | CCCGGG | 1 cut(s) | 966 |
| TspRI | CASTG | 2 cut(s) | 214, 256 |
| Tth111I | GACNNNGTC | 1 cut(s) | 776 |
| VpaK11BI | GGWCC | 3 cut(s) | 246, 900, 1011 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 623 |
| XapI | RAATTY | 1 cut(s) | 645 |
| XmaI | CCCGGG | 1 cut(s) | 966 |
| XspI | CTAG | 1 cut(s) | 993 |
| ZraI | GACGTC | 1 cut(s) | 739 |