No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 182 |
| AatII | GACGTC | 1 cut(s) | 186 |
| AccB1I | GGYRCC | 4 cut(s) | 114, 398, 471, 490 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 177, 408 |
| AccBSI | CCGCTC | 3 cut(s) | 37, 497, 607 |
| AccII | CGCG | 1 cut(s) | 153 |
| AclI | AACGTT | 1 cut(s) | 375 |
| AclWI | GGATC | 1 cut(s) | 265 |
| AcoI | YGGCCR | 2 cut(s) | 291, 590 |
| AcuI | CTGAAG | 2 cut(s) | 254, 260 |
| AcyI | GRCGYC | 3 cut(s) | 14, 115, 183 |
| AfaI | GTAC | 1 cut(s) | 286 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 93, 124, 177, 235, 247, 289, 408 |
| AgsI | TTSAA | 2 cut(s) | 313, 380 |
| AleI | CACNNNNGTG | 1 cut(s) | 299 |
| AluBI | AGCT | 4 cut(s) | 43, 76, 160, 244 |
| AluI | AGCT | 4 cut(s) | 43, 76, 160, 244 |
| Alw26I | GTCTC | 4 cut(s) | 68, 172, 576, 607 |
| AlwI | GGATC | 1 cut(s) | 265 |
| Ama87I | CYCGRG | 2 cut(s) | 27, 602 |
| AoxI | GGCC | 6 cut(s) | 24, 84, 291, 417, 434, 590 |
| ApeKI | GCWGC | 2 cut(s) | 40, 140 |
| AspLEI | GCGC | 2 cut(s) | 117, 453 |
| AspS9I | GGNCC | 3 cut(s) | 25, 238, 434 |
| AsuC2I | CCSGG | 2 cut(s) | 28, 29 |
| AsuHPI | GGTGA | 1 cut(s) | 529 |
| AsuNHI | GCTAGC | 1 cut(s) | 244 |
| AvaI | CYCGRG | 2 cut(s) | 27, 602 |
| AvaII | GGWCC | 1 cut(s) | 238 |
| BaeGI | GKGCMC | 2 cut(s) | 476, 495 |
| BalI | TGGCCA | 1 cut(s) | 592 |
| BanI | GGYRCC | 4 cut(s) | 114, 398, 471, 490 |
| BauI | CACGAG | 1 cut(s) | 575 |
| BbvCI | CCTCAGC | 2 cut(s) | 44, 485 |
| BbvI | GCAGC | 2 cut(s) | 52, 127 |
| BccI | CCATC | 1 cut(s) | 410 |
| BceAI | ACGGC | 3 cut(s) | 267, 306, 421 |
| BcnI | CCSGG | 2 cut(s) | 28, 29 |
| BcoDI | GTCTC | 4 cut(s) | 68, 172, 576, 607 |
| BfaI | CTAG | 3 cut(s) | 8, 245, 360 |
| BfoI | RGCGCY | 2 cut(s) | 118, 454 |
| BisI | GCNGC | 8 cut(s) | 12, 38, 41, 141, 154, 249, 366, 369 |
| BlsI | GCNGC | 8 cut(s) | 13, 39, 42, 142, 155, 250, 367, 370 |
| Bme1390I | CCNGG | 2 cut(s) | 28, 29 |
| Bme18I | GGWCC | 1 cut(s) | 238 |
| BmeT110I | CYCGRG | 2 cut(s) | 27, 602 |
| BmgT120I | GGNCC | 3 cut(s) | 25, 238, 434 |
| BmiI | GGNNCC | 4 cut(s) | 116, 400, 473, 492 |
| BmrFI | CCNGG | 2 cut(s) | 28, 29 |
| BmrI | ACTGGG | 2 cut(s) | 187, 418 |
| BmsI | GCATC | 4 cut(s) | 94, 127, 136, 531 |
| BmtI | GCTAGC | 1 cut(s) | 248 |
| BmuI | ACTGGG | 2 cut(s) | 187, 418 |
| Bpu10I | CCTNAGC | 3 cut(s) | 44, 485, 498 |
| BpuMI | CCSGG | 2 cut(s) | 28, 29 |
| BsaBI | GATNNNNATC | 1 cut(s) | 269 |
| BsaHI | GRCGYC | 3 cut(s) | 14, 115, 183 |
| BsaI | GGTCTC | 3 cut(s) | 68, 576, 607 |
| BsaJI | CCNNGG | 2 cut(s) | 27, 566 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 537, 567 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 93, 124, 177, 235, 247, 289, 408 |
| Bse1I | ACTGG | 2 cut(s) | 182, 413 |
| Bse8I | GATNNNNATC | 1 cut(s) | 269 |
| BseDI | CCNNGG | 2 cut(s) | 27, 566 |
| BseGI | GGATG | 3 cut(s) | 109, 151, 615 |
| BseJI | GATNNNNATC | 1 cut(s) | 269 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 93, 124, 177, 235, 247, 289, 408 |
| BseMII | CTCAG | 4 cut(s) | 35, 476, 512, 553 |
| BseNI | ACTGG | 2 cut(s) | 182, 413 |
| BseRI | GAGGAG | 1 cut(s) | 65 |
| BseSI | GKGCMC | 2 cut(s) | 476, 495 |
| BseXI | GCAGC | 2 cut(s) | 52, 127 |
| BseYI | CCCAGC | 2 cut(s) | 76, 431 |
| BsgI | GTGCAG | 1 cut(s) | 599 |
| Bsh1236I | CGCG | 1 cut(s) | 153 |
| BshFI | GGCC | 6 cut(s) | 26, 86, 293, 419, 436, 592 |
| BshNI | GGYRCC | 4 cut(s) | 114, 398, 471, 490 |
| BsiHKCI | CYCGRG | 2 cut(s) | 27, 602 |
| BsiSI | CCGG | 2 cut(s) | 28, 441 |
| BsiWI | CGTACG | 1 cut(s) | 284 |
| BslFI | GGGAC | 1 cut(s) | 194 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 93, 124, 177, 235, 247, 289, 408 |
| BsmAI | GTCTC | 4 cut(s) | 68, 172, 576, 607 |
| BsmFI | GGGAC | 1 cut(s) | 194 |
| BsmI | GAATGC | 1 cut(s) | 308 |
| BsnI | GGCC | 6 cut(s) | 26, 86, 293, 419, 436, 592 |
| Bso31I | GGTCTC | 3 cut(s) | 68, 576, 607 |
| BsoBI | CYCGRG | 2 cut(s) | 27, 602 |
| Bsp1286I | GDGCHC | 2 cut(s) | 476, 495 |
| Bsp143I | GATC | 2 cut(s) | 54, 270 |
| BspANI | GGCC | 6 cut(s) | 26, 86, 293, 419, 436, 592 |
| BspCNI | CTCAG | 4 cut(s) | 36, 477, 511, 552 |
| BspFNI | CGCG | 1 cut(s) | 153 |
| BspLI | GGNNCC | 4 cut(s) | 116, 400, 473, 492 |
| BspOI | GCTAGC | 1 cut(s) | 248 |
| BspPI | GGATC | 1 cut(s) | 265 |
| BspT107I | GGYRCC | 4 cut(s) | 114, 398, 471, 490 |
| BspTNI | GGTCTC | 3 cut(s) | 68, 576, 607 |
| BsrBI | CCGCTC | 3 cut(s) | 37, 497, 607 |
| BsrI | ACTGG | 2 cut(s) | 182, 413 |
| BssECI | CCNNGG | 2 cut(s) | 27, 566 |
| BssMI | GATC | 2 cut(s) | 54, 270 |
| BssNI | GRCGYC | 3 cut(s) | 14, 115, 183 |
| BssSI | CACGAG | 1 cut(s) | 575 |
| BssT1I | CCWWGG | 1 cut(s) | 566 |
| Bst2BI | CACGAG | 1 cut(s) | 575 |
| Bst4CI | ACNGT | 1 cut(s) | 301 |
| BstACI | GRCGYC | 3 cut(s) | 14, 115, 183 |
| BstC8I | GCNNGC | 7 cut(s) | 24, 151, 158, 162, 246, 495, 582 |
| BstDEI | CTNAG | 4 cut(s) | 44, 485, 498, 539 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 122, 233 |
| BstF5I | GGATG | 3 cut(s) | 109, 151, 615 |
| BstFNI | CGCG | 1 cut(s) | 153 |
| BstH2I | RGCGCY | 2 cut(s) | 118, 454 |
| BstHHI | GCGC | 2 cut(s) | 117, 453 |
| BstKTI | GATC | 2 cut(s) | 57, 273 |
| BstMAI | GTCTC | 4 cut(s) | 68, 172, 576, 607 |
| BstMBI | GATC | 2 cut(s) | 54, 270 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 146, 365, 450, 490, 503 |
| BstSCI | CCNGG | 2 cut(s) | 26, 27 |
| BstSLI | GKGCMC | 2 cut(s) | 476, 495 |
| BstUI | CGCG | 1 cut(s) | 153 |
| BstV1I | GCAGC | 2 cut(s) | 52, 127 |
| BstX2I | RGATCY | 1 cut(s) | 270 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 301, 431 |
| BstYI | RGATCY | 1 cut(s) | 270 |
| BsuRI | GGCC | 6 cut(s) | 26, 86, 293, 419, 436, 592 |
| BtsCI | GGATG | 3 cut(s) | 109, 151, 615 |
| BtsIMutI | CAGTG | 1 cut(s) | 297 |
| Cac8I | GCNNGC | 7 cut(s) | 24, 151, 158, 162, 246, 495, 582 |
| CfoI | GCGC | 2 cut(s) | 117, 453 |
| Cfr13I | GGNCC | 3 cut(s) | 25, 238, 434 |
| Cfr9I | CCCGGG | 1 cut(s) | 27 |
| CseI | GACGC | 1 cut(s) | 3 |
| Csp6I | GTAC | 1 cut(s) | 285 |
| CviAII | CATG | 1 cut(s) | 340 |
| CviQI | GTAC | 1 cut(s) | 285 |
| DdeI | CTNAG | 4 cut(s) | 44, 485, 498, 539 |
| DinI | GGCGCC | 1 cut(s) | 116 |
| DpnI | GATC | 2 cut(s) | 56, 272 |
| DpnII | GATC | 2 cut(s) | 54, 270 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 182 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 182 |
| EaeI | YGGCCR | 2 cut(s) | 291, 590 |
| Eco130I | CCWWGG | 1 cut(s) | 566 |
| Eco147I | AGGCCT | 1 cut(s) | 419 |
| Eco31I | GGTCTC | 3 cut(s) | 68, 576, 607 |
| Eco47I | GGWCC | 1 cut(s) | 238 |
| Eco57I | CTGAAG | 2 cut(s) | 254, 260 |
| Eco88I | CYCGRG | 2 cut(s) | 27, 602 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 122, 233 |
| EcoT14I | CCWWGG | 1 cut(s) | 566 |
| EgeI | GGCGCC | 1 cut(s) | 116 |
| EheI | GGCGCC | 1 cut(s) | 116 |
| ErhI | CCWWGG | 1 cut(s) | 566 |
| FaeI | CATG | 1 cut(s) | 343 |
| FaiI | YATR | 5 cut(s) | 224, 341, 446, 589, 622 |
| FaqI | GGGAC | 1 cut(s) | 194 |
| FatI | CATG | 1 cut(s) | 339 |
| FauI | CCCGC | 2 cut(s) | 436, 502 |
| Fnu4HI | GCNGC | 8 cut(s) | 12, 38, 41, 141, 154, 249, 366, 369 |
| FokI | GGATG | 2 cut(s) | 116, 158 |
| Fsp4HI | GCNGC | 8 cut(s) | 12, 38, 41, 141, 154, 249, 366, 369 |
| FspBI | CTAG | 3 cut(s) | 8, 245, 360 |
| GlaI | GCGC | 2 cut(s) | 116, 452 |
| GluI | GCNGC | 8 cut(s) | 12, 38, 41, 141, 154, 249, 366, 369 |
| GsaI | CCCAGC | 2 cut(s) | 80, 435 |
| HaeII | RGCGCY | 2 cut(s) | 118, 454 |
| HaeIII | GGCC | 6 cut(s) | 26, 86, 293, 419, 436, 592 |
| HapII | CCGG | 2 cut(s) | 28, 441 |
| HgaI | GACGC | 1 cut(s) | 3 |
| HhaI | GCGC | 2 cut(s) | 117, 453 |
| Hin1I | GRCGYC | 3 cut(s) | 14, 115, 183 |
| Hin1II | CATG | 1 cut(s) | 343 |
| Hin6I | GCGC | 2 cut(s) | 115, 451 |
| HinP1I | GCGC | 2 cut(s) | 115, 451 |
| HinfI | GANTC | 3 cut(s) | 347, 535, 546 |
| HpaII | CCGG | 2 cut(s) | 28, 441 |
| HphI | GGTGA | 1 cut(s) | 529 |
| Hpy166II | GTNNAC | 1 cut(s) | 531 |
| Hpy188I | TCNGA | 1 cut(s) | 279 |
| Hpy8I | GTNNAC | 1 cut(s) | 531 |
| Hpy99I | CGWCG | 3 cut(s) | 19, 188, 292 |
| HpyAV | CCTTC | 4 cut(s) | 229, 284, 349, 464 |
| HpyCH4III | ACNGT | 1 cut(s) | 301 |
| HpyCH4IV | ACGT | 2 cut(s) | 183, 375 |
| HpyCH4V | TGCA | 2 cut(s) | 207, 580 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 146, 365, 450, 490, 503 |
| HpyF3I | CTNAG | 4 cut(s) | 44, 485, 498, 539 |
| HpySE526I | ACGT | 2 cut(s) | 183, 375 |
| Hsp92I | GRCGYC | 3 cut(s) | 14, 115, 183 |
| Hsp92II | CATG | 1 cut(s) | 343 |
| HspAI | GCGC | 2 cut(s) | 115, 451 |
| KasI | GGCGCC | 1 cut(s) | 114 |
| Kzo9I | GATC | 2 cut(s) | 54, 270 |
| LmnI | GCTCC | 1 cut(s) | 73 |
| Lsp1109I | GCAGC | 2 cut(s) | 52, 127 |
| LweI | GCATC | 4 cut(s) | 94, 127, 136, 531 |
| MaeI | CTAG | 3 cut(s) | 8, 245, 360 |
| MaeII | ACGT | 2 cut(s) | 183, 375 |
| MalI | GATC | 2 cut(s) | 56, 272 |
| MbiI | CCGCTC | 3 cut(s) | 37, 497, 607 |
| MboI | GATC | 2 cut(s) | 54, 270 |
| MboII | GAAGA | 1 cut(s) | 274 |
| MflI | RGATCY | 1 cut(s) | 270 |
| MhlI | GDGCHC | 2 cut(s) | 476, 495 |
| MlsI | TGGCCA | 1 cut(s) | 592 |
| MluNI | TGGCCA | 1 cut(s) | 592 |
| Mly113I | GGCGCC | 1 cut(s) | 115 |
| MlyI | GAGTC | 2 cut(s) | 529, 540 |
| MmeI | TCCRAC | 1 cut(s) | 78 |
| MnlI | CCTC | 9 cut(s) | 39, 43, 76, 94, 105, 298, 430, 480, 563 |
| Mox20I | TGGCCA | 1 cut(s) | 592 |
| MscI | TGGCCA | 1 cut(s) | 592 |
| MseI | TTAA | 1 cut(s) | 258 |
| MslI | CAYNNNNRTG | 1 cut(s) | 299 |
| Msp20I | TGGCCA | 1 cut(s) | 592 |
| MspA1I | CMGCKG | 3 cut(s) | 43, 431, 543 |
| MspI | CCGG | 2 cut(s) | 28, 441 |
| MspR9I | CCNGG | 2 cut(s) | 28, 29 |
| Mva1269I | GAATGC | 1 cut(s) | 308 |
| MvnI | CGCG | 1 cut(s) | 153 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 146, 365, 450, 490, 503 |
| NarI | GGCGCC | 1 cut(s) | 115 |
| NciI | CCSGG | 2 cut(s) | 28, 29 |
| NdeII | GATC | 2 cut(s) | 54, 270 |
| NheI | GCTAGC | 1 cut(s) | 244 |
| NlaIII | CATG | 1 cut(s) | 343 |
| NlaIV | GGNNCC | 4 cut(s) | 116, 400, 473, 492 |
| OliI | CACNNNNGTG | 1 cut(s) | 299 |
| PaeR7I | CTCGAG | 1 cut(s) | 602 |
| PceI | AGGCCT | 1 cut(s) | 419 |
| PctI | GAATGC | 1 cut(s) | 308 |
| PfeI | GAWTC | 1 cut(s) | 347 |
| Pfl23II | CGTACG | 1 cut(s) | 284 |
| PflFI | GACNNNGTC | 1 cut(s) | 410 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 177, 408 |
| PkrI | GCNGC | 8 cut(s) | 13, 39, 42, 142, 155, 250, 367, 370 |
| PleI | GAGTC | 2 cut(s) | 529, 540 |
| PluTI | GGCGCC | 1 cut(s) | 118 |
| PpsI | GAGTC | 2 cut(s) | 529, 540 |
| Psp1406I | AACGTT | 1 cut(s) | 375 |
| PspFI | CCCAGC | 2 cut(s) | 76, 431 |
| PspLI | CGTACG | 1 cut(s) | 284 |
| PspN4I | GGNNCC | 4 cut(s) | 116, 400, 473, 492 |
| PspPI | GGNCC | 3 cut(s) | 25, 238, 434 |
| PspXI | VCTCGAGB | 1 cut(s) | 602 |
| PsuI | RGATCY | 1 cut(s) | 270 |
| PsyI | GACNNNGTC | 1 cut(s) | 410 |
| PvuII | CAGCTG | 1 cut(s) | 43 |
| RsaI | GTAC | 1 cut(s) | 286 |
| RsaNI | GTAC | 1 cut(s) | 285 |
| RseI | CAYNNNNRTG | 1 cut(s) | 299 |
| SaqAI | TTAA | 1 cut(s) | 258 |
| SatI | GCNGC | 8 cut(s) | 12, 38, 41, 141, 154, 249, 366, 369 |
| Sau3AI | GATC | 2 cut(s) | 54, 270 |
| Sau96I | GGNCC | 3 cut(s) | 25, 238, 434 |
| SchI | GAGTC | 2 cut(s) | 529, 540 |
| ScrFI | CCNGG | 2 cut(s) | 28, 29 |
| SduI | GDGCHC | 2 cut(s) | 476, 495 |
| SfaNI | GCATC | 4 cut(s) | 94, 127, 136, 531 |
| SfoI | GGCGCC | 1 cut(s) | 116 |
| Sfr274I | CTCGAG | 1 cut(s) | 602 |
| SinI | GGWCC | 1 cut(s) | 238 |
| SlaI | CTCGAG | 1 cut(s) | 602 |
| SmaI | CCCGGG | 1 cut(s) | 29 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 299 |
| SmlI | CTYRAG | 1 cut(s) | 602 |
| SmoI | CTYRAG | 1 cut(s) | 602 |
| SseBI | AGGCCT | 1 cut(s) | 419 |
| SspDI | GGCGCC | 1 cut(s) | 114 |
| SspMI | CTAG | 3 cut(s) | 8, 245, 360 |
| StuI | AGGCCT | 1 cut(s) | 419 |
| StyD4I | CCNGG | 2 cut(s) | 26, 27 |
| StyI | CCWWGG | 1 cut(s) | 566 |
| TaaI | ACNGT | 1 cut(s) | 301 |
| TaiI | ACGT | 2 cut(s) | 186, 378 |
| TaqI | TCGA | 4 cut(s) | 17, 186, 405, 603 |
| TauI | GCSGC | 6 cut(s) | 14, 40, 156, 251, 368, 371 |
| TfiI | GAWTC | 1 cut(s) | 347 |
| Tru1I | TTAA | 1 cut(s) | 258 |
| Tru9I | TTAA | 1 cut(s) | 258 |
| TscAI | CASTG | 1 cut(s) | 304 |
| TseI | GCWGC | 2 cut(s) | 40, 140 |
| TspDTI | ATGAA | 1 cut(s) | 356 |
| TspMI | CCCGGG | 1 cut(s) | 27 |
| TspRI | CASTG | 1 cut(s) | 304 |
| Tth111I | GACNNNGTC | 1 cut(s) | 410 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 177, 408 |
| VpaK11BI | GGWCC | 1 cut(s) | 238 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 122, 233 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 94 |
| XhoI | CTCGAG | 1 cut(s) | 602 |
| XmaI | CCCGGG | 1 cut(s) | 27 |
| XspI | CTAG | 3 cut(s) | 8, 245, 360 |
| ZraI | GACGTC | 1 cut(s) | 184 |