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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 2 cut(s) | 951, 1441 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 429 |
| Acc36I | ACCTGC | 3 cut(s) | 951, 1146, 1441 |
| AccB1I | GGYRCC | 3 cut(s) | 512, 1216, 1670 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1086 |
| AccBSI | CCGCTC | 1 cut(s) | 1303 |
| AccII | CGCG | 8 cut(s) | 329, 576, 780, 782, 1127, 1174, 1389, 1467 |
| AclI | AACGTT | 1 cut(s) | 1326 |
| AclWI | GGATC | 5 cut(s) | 642, 676, 746, 1431, 1452 |
| AcoI | YGGCCR | 4 cut(s) | 96, 330, 1605, 1653 |
| AcsI | RAATTY | 1 cut(s) | 539 |
| AcuI | CTGAAG | 3 cut(s) | 311, 371, 1273 |
| AcyI | GRCGYC | 1 cut(s) | 1217 |
| AdeI | CACNNNGTG | 1 cut(s) | 343 |
| AfaI | GTAC | 3 cut(s) | 157, 326, 730 |
| AflIII | ACRYGT | 1 cut(s) | 438 |
| AgeI | ACCGGT | 1 cut(s) | 193 |
| AgsI | TTSAA | 5 cut(s) | 256, 382, 463, 710, 1027 |
| AjnI | CCWGG | 3 cut(s) | 354, 918, 1658 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 821, 853 |
| Alw21I | GWGCWC | 2 cut(s) | 339, 1155 |
| Alw26I | GTCTC | 3 cut(s) | 32, 315, 1691 |
| Alw44I | GTGCAC | 2 cut(s) | 335, 1151 |
| AlwI | GGATC | 5 cut(s) | 642, 676, 746, 1431, 1452 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1296 |
| Ama87I | CYCGRG | 2 cut(s) | 263, 761 |
| AoxI | GGCC | 7 cut(s) | 96, 330, 847, 1188, 1605, 1614, 1653 |
| ApaLI | GTGCAC | 2 cut(s) | 335, 1151 |
| ApoI | RAATTY | 1 cut(s) | 539 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 401, 433 |
| AsiGI | ACCGGT | 1 cut(s) | 193 |
| AspLEI | GCGC | 8 cut(s) | 782, 1174, 1219, 1389, 1391, 1601, 1648, 1732 |
| AspS9I | GGNCC | 2 cut(s) | 212, 494 |
| AsuC2I | CCSGG | 3 cut(s) | 144, 762, 763 |
| AsuHPI | GGTGA | 7 cut(s) | 68, 406, 923, 1003, 1130, 1186, 1234 |
| AsuNHI | GCTAGC | 2 cut(s) | 1205, 1417 |
| AvaI | CYCGRG | 2 cut(s) | 263, 761 |
| AvaII | GGWCC | 2 cut(s) | 212, 494 |
| BaeGI | GKGCMC | 2 cut(s) | 339, 1155 |
| BalI | TGGCCA | 1 cut(s) | 98 |
| BanI | GGYRCC | 3 cut(s) | 512, 1216, 1670 |
| Bbv12I | GWGCWC | 2 cut(s) | 339, 1155 |
| BbvCI | CCTCAGC | 2 cut(s) | 909, 1566 |
| BccI | CCATC | 7 cut(s) | 179, 448, 1064, 1175, 1199, 1372, 1657 |
| BceAI | ACGGC | 6 cut(s) | 317, 1109, 1126, 1204, 1592, 1668 |
| BciT130I | CCWGG | 3 cut(s) | 356, 920, 1660 |
| BciVI | GTATCC | 1 cut(s) | 55 |
| BcnI | CCSGG | 3 cut(s) | 144, 762, 763 |
| BcoDI | GTCTC | 3 cut(s) | 32, 315, 1691 |
| BfaI | CTAG | 4 cut(s) | 609, 1206, 1418, 1574 |
| BfmI | CTRYAG | 2 cut(s) | 843, 1448 |
| BfoI | RGCGCY | 1 cut(s) | 1220 |
| BfuAI | ACCTGC | 3 cut(s) | 951, 1146, 1441 |
| BfuI | GTATCC | 1 cut(s) | 55 |
| BglI | GCCNNNNNGGC | 4 cut(s) | 483, 1439, 1613, 1664 |
| BmcAI | AGTACT | 1 cut(s) | 157 |
| Bme1390I | CCNGG | 6 cut(s) | 144, 356, 762, 763, 920, 1660 |
| Bme18I | GGWCC | 2 cut(s) | 212, 494 |
| BmeT110I | CYCGRG | 2 cut(s) | 263, 761 |
| BmgT120I | GGNCC | 2 cut(s) | 212, 494 |
| BmiI | GGNNCC | 8 cut(s) | 368, 476, 495, 514, 723, 1075, 1218, 1672 |
| BmrFI | CCNGG | 6 cut(s) | 144, 356, 762, 763, 920, 1660 |
| BmrI | ACTGGG | 1 cut(s) | 720 |
| BmsI | GCATC | 5 cut(s) | 210, 915, 937, 1302, 1633 |
| BmtI | GCTAGC | 2 cut(s) | 1209, 1421 |
| BmuI | ACTGGG | 1 cut(s) | 720 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 26, 58 |
| BpmI | CTGGAG | 2 cut(s) | 941, 1715 |
| Bpu10I | CCTNAGC | 5 cut(s) | 278, 507, 909, 1488, 1566 |
| BpuEI | CTTGAG | 1 cut(s) | 1673 |
| BpuMI | CCSGG | 3 cut(s) | 144, 762, 763 |
| BsaHI | GRCGYC | 1 cut(s) | 1217 |
| BsaI | GGTCTC | 1 cut(s) | 32 |
| BsaWI | WCCGGW | 1 cut(s) | 193 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 821, 851, 1205, 1235 |
| Bse118I | RCCGGY | 2 cut(s) | 193, 316 |
| Bse1I | ACTGG | 4 cut(s) | 72, 99, 689, 726 |
| Bse3DI | GCAATG | 1 cut(s) | 57 |
| BseBI | CCWGG | 3 cut(s) | 356, 920, 1660 |
| BseGI | GGATG | 7 cut(s) | 1186, 1338, 1364, 1648, 1668, 1683, 1711 |
| BseMI | GCAATG | 1 cut(s) | 57 |
| BseMII | CTCAG | 2 cut(s) | 900, 1557 |
| BseNI | ACTGG | 4 cut(s) | 72, 99, 689, 726 |
| BsePI | GCGCGC | 1 cut(s) | 1387 |
| BseRI | GAGGAG | 2 cut(s) | 50, 143 |
| BseSI | GKGCMC | 2 cut(s) | 339, 1155 |
| BseX3I | CGGCCG | 3 cut(s) | 330, 1605, 1653 |
| BseYI | CCCAGC | 2 cut(s) | 688, 810 |
| BsgI | GTGCAG | 3 cut(s) | 723, 1083, 1400 |
| Bsh1236I | CGCG | 8 cut(s) | 329, 576, 780, 782, 1127, 1174, 1389, 1467 |
| Bsh1285I | CGRYCG | 5 cut(s) | 333, 501, 870, 1608, 1656 |
| BshFI | GGCC | 7 cut(s) | 98, 332, 849, 1190, 1607, 1616, 1655 |
| BshNI | GGYRCC | 3 cut(s) | 512, 1216, 1670 |
| BshTI | ACCGGT | 1 cut(s) | 193 |
| BsiEI | CGRYCG | 5 cut(s) | 333, 501, 870, 1608, 1656 |
| BsiHKAI | GWGCWC | 2 cut(s) | 339, 1155 |
| BsiHKCI | CYCGRG | 2 cut(s) | 263, 761 |
| BsiSI | CCGG | 5 cut(s) | 144, 194, 317, 483, 762 |
| BslFI | GGGAC | 1 cut(s) | 202 |
| BsmAI | GTCTC | 3 cut(s) | 32, 315, 1691 |
| BsmBI | CGTCTC | 1 cut(s) | 315 |
| BsmFI | GGGAC | 1 cut(s) | 202 |
| BsmI | GAATGC | 1 cut(s) | 469 |
| BsnI | GGCC | 7 cut(s) | 98, 332, 849, 1190, 1607, 1616, 1655 |
| Bso31I | GGTCTC | 1 cut(s) | 32 |
| BsoBI | CYCGRG | 2 cut(s) | 263, 761 |
| Bsp1286I | GDGCHC | 2 cut(s) | 339, 1155 |
| Bsp143I | GATC | 8 cut(s) | 231, 523, 634, 668, 751, 1423, 1444, 1532 |
| Bsp68I | TCGCGA | 1 cut(s) | 576 |
| BspANI | GGCC | 7 cut(s) | 98, 332, 849, 1190, 1607, 1616, 1655 |
| BspCNI | CTCAG | 2 cut(s) | 901, 1558 |
| BspFNI | CGCG | 8 cut(s) | 329, 576, 780, 782, 1127, 1174, 1389, 1467 |
| BspLI | GGNNCC | 8 cut(s) | 368, 476, 495, 514, 723, 1075, 1218, 1672 |
| BspMAI | CTGCAG | 1 cut(s) | 1452 |
| BspMI | ACCTGC | 3 cut(s) | 951, 1146, 1441 |
| BspOI | GCTAGC | 2 cut(s) | 1209, 1421 |
| BspPI | GGATC | 5 cut(s) | 642, 676, 746, 1431, 1452 |
| BspQI | GCTCTTC | 1 cut(s) | 1292 |
| BspT107I | GGYRCC | 3 cut(s) | 512, 1216, 1670 |
| BspTNI | GGTCTC | 1 cut(s) | 32 |
| BsrBI | CCGCTC | 1 cut(s) | 1303 |
| BsrDI | GCAATG | 1 cut(s) | 57 |
| BsrFI | RCCGGY | 2 cut(s) | 193, 316 |
| BsrI | ACTGG | 4 cut(s) | 72, 99, 689, 726 |
| BssAI | RCCGGY | 2 cut(s) | 193, 316 |
| BssHII | GCGCGC | 1 cut(s) | 1387 |
| BssMI | GATC | 8 cut(s) | 231, 523, 634, 668, 751, 1423, 1444, 1532 |
| BssNI | GRCGYC | 1 cut(s) | 1217 |
| BssT1I | CCWWGG | 5 cut(s) | 552, 980, 1069, 1434, 1629 |
| Bst2UI | CCWGG | 3 cut(s) | 356, 920, 1660 |
| Bst4CI | ACNGT | 8 cut(s) | 107, 119, 155, 160, 502, 871, 964, 1403 |
| Bst6I | CTCTTC | 2 cut(s) | 610, 1292 |
| BstACI | GRCGYC | 1 cut(s) | 1217 |
| BstDEI | CTNAG | 7 cut(s) | 278, 507, 773, 909, 992, 1488, 1566 |
| BstDSI | CCRYGG | 2 cut(s) | 501, 951 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1042 |
| BstF5I | GGATG | 7 cut(s) | 1186, 1338, 1364, 1648, 1668, 1683, 1711 |
| BstFNI | CGCG | 8 cut(s) | 329, 576, 780, 782, 1127, 1174, 1389, 1467 |
| BstH2I | RGCGCY | 1 cut(s) | 1220 |
| BstHHI | GCGC | 8 cut(s) | 782, 1174, 1219, 1389, 1391, 1601, 1648, 1732 |
| BstKTI | GATC | 8 cut(s) | 234, 526, 637, 671, 754, 1426, 1447, 1535 |
| BstMAI | GTCTC | 3 cut(s) | 32, 315, 1691 |
| BstMBI | GATC | 8 cut(s) | 231, 523, 634, 668, 751, 1423, 1444, 1532 |
| BstMCI | CGRYCG | 5 cut(s) | 333, 501, 870, 1608, 1656 |
| BstNI | CCWGG | 3 cut(s) | 356, 920, 1660 |
| BstNSI | RCATGY | 1 cut(s) | 442 |
| BstSCI | CCNGG | 6 cut(s) | 142, 354, 760, 761, 918, 1658 |
| BstSFI | CTRYAG | 2 cut(s) | 843, 1448 |
| BstSLI | GKGCMC | 2 cut(s) | 339, 1155 |
| BstUI | CGCG | 8 cut(s) | 329, 576, 780, 782, 1127, 1174, 1389, 1467 |
| BstX2I | RGATCY | 3 cut(s) | 668, 751, 1444 |
| BstYI | RGATCY | 3 cut(s) | 668, 751, 1444 |
| BstZI | CGGCCG | 3 cut(s) | 330, 1605, 1653 |
| BsuI | GTATCC | 1 cut(s) | 55 |
| BsuRI | GGCC | 7 cut(s) | 98, 332, 849, 1190, 1607, 1616, 1655 |
| BtgI | CCRYGG | 2 cut(s) | 501, 951 |
| BtgZI | GCGATG | 1 cut(s) | 162 |
| BtsCI | GGATG | 7 cut(s) | 1186, 1338, 1364, 1648, 1668, 1683, 1711 |
| BtsIMutI | CAGTG | 3 cut(s) | 112, 287, 1066 |
| BtuMI | TCGCGA | 1 cut(s) | 576 |
| BveI | ACCTGC | 3 cut(s) | 951, 1146, 1441 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1296 |
| CfoI | GCGC | 8 cut(s) | 782, 1174, 1219, 1389, 1391, 1601, 1648, 1732 |
| Cfr10I | RCCGGY | 2 cut(s) | 193, 316 |
| Cfr13I | GGNCC | 2 cut(s) | 212, 494 |
| Cfr9I | CCCGGG | 1 cut(s) | 761 |
| CseI | GACGC | 3 cut(s) | 20, 614, 1133 |
| Csp6I | GTAC | 3 cut(s) | 156, 325, 729 |
| CspAI | ACCGGT | 1 cut(s) | 193 |
| CviAII | CATG | 2 cut(s) | 125, 439 |
| CviQI | GTAC | 3 cut(s) | 156, 325, 729 |
| DdeI | CTNAG | 7 cut(s) | 278, 507, 773, 909, 992, 1488, 1566 |
| DinI | GGCGCC | 1 cut(s) | 1218 |
| DpnI | GATC | 8 cut(s) | 233, 525, 636, 670, 753, 1425, 1446, 1534 |
| DpnII | GATC | 8 cut(s) | 231, 523, 634, 668, 751, 1423, 1444, 1532 |
| DraIII | CACNNNGTG | 1 cut(s) | 343 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 429 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 429 |
| EaeI | YGGCCR | 4 cut(s) | 96, 330, 1605, 1653 |
| EagI | CGGCCG | 3 cut(s) | 330, 1605, 1653 |
| Eam1104I | CTCTTC | 2 cut(s) | 610, 1292 |
| EarI | CTCTTC | 2 cut(s) | 610, 1292 |
| EciI | GGCGGA | 1 cut(s) | 1457 |
| EclXI | CGGCCG | 3 cut(s) | 330, 1605, 1653 |
| Eco130I | CCWWGG | 5 cut(s) | 552, 980, 1069, 1434, 1629 |
| Eco147I | AGGCCT | 1 cut(s) | 849 |
| Eco31I | GGTCTC | 1 cut(s) | 32 |
| Eco47I | GGWCC | 2 cut(s) | 212, 494 |
| Eco52I | CGGCCG | 3 cut(s) | 330, 1605, 1653 |
| Eco57I | CTGAAG | 3 cut(s) | 311, 371, 1273 |
| Eco88I | CYCGRG | 2 cut(s) | 263, 761 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1042 |
| EcoRI | GAATTC | 1 cut(s) | 539 |
| EcoRII | CCWGG | 3 cut(s) | 354, 918, 1658 |
| EcoT14I | CCWWGG | 5 cut(s) | 552, 980, 1069, 1434, 1629 |
| EcoT22I | ATGCAT | 1 cut(s) | 930 |
| EgeI | GGCGCC | 1 cut(s) | 1218 |
| EheI | GGCGCC | 1 cut(s) | 1218 |
| ErhI | CCWWGG | 5 cut(s) | 552, 980, 1069, 1434, 1629 |
| Esp3I | CGTCTC | 1 cut(s) | 315 |
| FaeI | CATG | 2 cut(s) | 128, 442 |
| FaqI | GGGAC | 1 cut(s) | 202 |
| FatI | CATG | 2 cut(s) | 124, 438 |
| FauI | CCCGC | 5 cut(s) | 378, 550, 907, 1202, 1509 |
| FauNDI | CATATG | 1 cut(s) | 1249 |
| FokI | GGATG | 7 cut(s) | 1193, 1345, 1351, 1655, 1670, 1675, 1718 |
| FspBI | CTAG | 4 cut(s) | 609, 1206, 1418, 1574 |
| GlaI | GCGC | 8 cut(s) | 781, 1173, 1218, 1388, 1390, 1600, 1647, 1731 |
| GsaI | CCCAGC | 2 cut(s) | 692, 814 |
| GsuI | CTGGAG | 2 cut(s) | 941, 1715 |
| HaeII | RGCGCY | 1 cut(s) | 1220 |
| HaeIII | GGCC | 7 cut(s) | 98, 332, 849, 1190, 1607, 1616, 1655 |
| HapII | CCGG | 5 cut(s) | 144, 194, 317, 483, 762 |
| HgaI | GACGC | 3 cut(s) | 20, 614, 1133 |
| HhaI | GCGC | 8 cut(s) | 782, 1174, 1219, 1389, 1391, 1601, 1648, 1732 |
| Hin1I | GRCGYC | 1 cut(s) | 1217 |
| Hin1II | CATG | 2 cut(s) | 128, 442 |
| Hin6I | GCGC | 8 cut(s) | 780, 1172, 1217, 1387, 1389, 1599, 1646, 1730 |
| HinP1I | GCGC | 8 cut(s) | 780, 1172, 1217, 1387, 1389, 1599, 1646, 1730 |
| HincII | GTYRAC | 2 cut(s) | 874, 1399 |
| HindII | GTYRAC | 2 cut(s) | 874, 1399 |
| HindIII | AAGCTT | 1 cut(s) | 257 |
| HinfI | GANTC | 6 cut(s) | 164, 571, 653, 716, 1520, 1735 |
| HpaII | CCGG | 5 cut(s) | 144, 194, 317, 483, 762 |
| HphI | GGTGA | 7 cut(s) | 68, 406, 923, 1003, 1130, 1186, 1234 |
| Hpy166II | GTNNAC | 9 cut(s) | 10, 122, 337, 731, 874, 1132, 1153, 1399, 1475 |
| Hpy188I | TCNGA | 7 cut(s) | 184, 216, 390, 435, 498, 538, 1316 |
| Hpy188III | TCNNGA | 6 cut(s) | 32, 527, 575, 666, 1232, 1574 |
| Hpy8I | GTNNAC | 9 cut(s) | 10, 122, 337, 731, 874, 1132, 1153, 1399, 1475 |
| Hpy99I | CGWCG | 1 cut(s) | 1127 |
| HpyAV | CCTTC | 6 cut(s) | 395, 964, 979, 1109, 1171, 1579 |
| HpyCH4III | ACNGT | 8 cut(s) | 107, 119, 155, 160, 502, 871, 964, 1403 |
| HpyCH4IV | ACGT | 2 cut(s) | 1326, 1558 |
| HpyF3I | CTNAG | 7 cut(s) | 278, 507, 773, 909, 992, 1488, 1566 |
| HpySE526I | ACGT | 2 cut(s) | 1326, 1558 |
| Hsp92I | GRCGYC | 1 cut(s) | 1217 |
| Hsp92II | CATG | 2 cut(s) | 128, 442 |
| HspAI | GCGC | 8 cut(s) | 780, 1172, 1217, 1387, 1389, 1599, 1646, 1730 |
| KasI | GGCGCC | 1 cut(s) | 1216 |
| KroI | GCCGGC | 1 cut(s) | 316 |
| KroNI | GCCGGC | 1 cut(s) | 318 |
| Kzo9I | GATC | 8 cut(s) | 231, 523, 634, 668, 751, 1423, 1444, 1532 |
| LguI | GCTCTTC | 1 cut(s) | 1292 |
| LmnI | GCTCC | 5 cut(s) | 474, 988, 1079, 1279, 1414 |
| LweI | GCATC | 5 cut(s) | 210, 915, 937, 1302, 1633 |
| MaeI | CTAG | 4 cut(s) | 609, 1206, 1418, 1574 |
| MaeII | ACGT | 2 cut(s) | 1326, 1558 |
| MaeIII | GTNAC | 3 cut(s) | 101, 1009, 1118 |
| MalI | GATC | 8 cut(s) | 233, 525, 636, 670, 753, 1425, 1446, 1534 |
| MbiI | CCGCTC | 1 cut(s) | 1303 |
| MboI | GATC | 8 cut(s) | 231, 523, 634, 668, 751, 1423, 1444, 1532 |
| MboII | GAAGA | 6 cut(s) | 304, 627, 654, 662, 1231, 1279 |
| MflI | RGATCY | 3 cut(s) | 668, 751, 1444 |
| MhlI | GDGCHC | 2 cut(s) | 339, 1155 |
| MlsI | TGGCCA | 1 cut(s) | 98 |
| MluCI | AATT | 4 cut(s) | 176, 539, 1458, 1478 |
| MluNI | TGGCCA | 1 cut(s) | 98 |
| Mly113I | GGCGCC | 1 cut(s) | 1217 |
| MlyI | GAGTC | 4 cut(s) | 173, 580, 710, 1744 |
| MmeI | TCCRAC | 1 cut(s) | 521 |
| Mox20I | TGGCCA | 1 cut(s) | 98 |
| Mph1103I | ATGCAT | 1 cut(s) | 930 |
| MroNI | GCCGGC | 1 cut(s) | 316 |
| MscI | TGGCCA | 1 cut(s) | 98 |
| MseI | TTAA | 3 cut(s) | 852, 1358, 1620 |
| Msp20I | TGGCCA | 1 cut(s) | 98 |
| MspA1I | CMGCKG | 4 cut(s) | 68, 1384, 1516, 1604 |
| MspI | CCGG | 5 cut(s) | 144, 194, 317, 483, 762 |
| MspR9I | CCNGG | 6 cut(s) | 144, 356, 762, 763, 920, 1660 |
| Mva1269I | GAATGC | 1 cut(s) | 469 |
| MvaI | CCWGG | 3 cut(s) | 356, 920, 1660 |
| MvnI | CGCG | 8 cut(s) | 329, 576, 780, 782, 1127, 1174, 1389, 1467 |
| NaeI | GCCGGC | 1 cut(s) | 318 |
| NarI | GGCGCC | 1 cut(s) | 1217 |
| NciI | CCSGG | 3 cut(s) | 144, 762, 763 |
| NdeI | CATATG | 1 cut(s) | 1249 |
| NdeII | GATC | 8 cut(s) | 231, 523, 634, 668, 751, 1423, 1444, 1532 |
| NgoMIV | GCCGGC | 1 cut(s) | 316 |
| NheI | GCTAGC | 2 cut(s) | 1205, 1417 |
| NlaIII | CATG | 2 cut(s) | 128, 442 |
| NlaIV | GGNNCC | 8 cut(s) | 368, 476, 495, 514, 723, 1075, 1218, 1672 |
| NmeAIII | GCCGAG | 2 cut(s) | 497, 928 |
| NmuCI | GTSAC | 3 cut(s) | 101, 1009, 1118 |
| NruI | TCGCGA | 1 cut(s) | 576 |
| NsiI | ATGCAT | 1 cut(s) | 930 |
| NspI | RCATGY | 1 cut(s) | 442 |
| PaqCI | CACCTGC | 2 cut(s) | 951, 1441 |
| PauI | GCGCGC | 1 cut(s) | 1387 |
| PceI | AGGCCT | 1 cut(s) | 849 |
| PciI | ACATGT | 1 cut(s) | 438 |
| PciSI | GCTCTTC | 1 cut(s) | 1292 |
| PctI | GAATGC | 1 cut(s) | 469 |
| PdiI | GCCGGC | 1 cut(s) | 318 |
| PfeI | GAWTC | 2 cut(s) | 653, 1520 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1086 |
| PfoI | TCCNGGA | 1 cut(s) | 918 |
| PinAI | ACCGGT | 1 cut(s) | 193 |
| PleI | GAGTC | 4 cut(s) | 172, 579, 710, 1743 |
| PluTI | GGCGCC | 1 cut(s) | 1220 |
| PpsI | GAGTC | 4 cut(s) | 172, 579, 710, 1743 |
| PscI | ACATGT | 1 cut(s) | 438 |
| Psp1406I | AACGTT | 1 cut(s) | 1326 |
| Psp6I | CCWGG | 3 cut(s) | 354, 918, 1658 |
| PspFI | CCCAGC | 2 cut(s) | 688, 810 |
| PspGI | CCWGG | 3 cut(s) | 354, 918, 1658 |
| PspN4I | GGNNCC | 8 cut(s) | 368, 476, 495, 514, 723, 1075, 1218, 1672 |
| PspPI | GGNCC | 2 cut(s) | 212, 494 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 741, 773 |
| PstI | CTGCAG | 1 cut(s) | 1452 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1296 |
| PsuI | RGATCY | 3 cut(s) | 668, 751, 1444 |
| PteI | GCGCGC | 1 cut(s) | 1387 |
| PvuII | CAGCTG | 1 cut(s) | 1384 |
| RruI | TCGCGA | 1 cut(s) | 576 |
| RsaI | GTAC | 3 cut(s) | 157, 326, 730 |
| RsaNI | GTAC | 3 cut(s) | 156, 325, 729 |
| SapI | GCTCTTC | 1 cut(s) | 1292 |
| SaqAI | TTAA | 3 cut(s) | 852, 1358, 1620 |
| Sau3AI | GATC | 8 cut(s) | 231, 523, 634, 668, 751, 1423, 1444, 1532 |
| Sau96I | GGNCC | 2 cut(s) | 212, 494 |
| ScaI | AGTACT | 1 cut(s) | 157 |
| SchI | GAGTC | 4 cut(s) | 173, 580, 710, 1744 |
| ScrFI | CCNGG | 6 cut(s) | 144, 356, 762, 763, 920, 1660 |
| SduI | GDGCHC | 2 cut(s) | 339, 1155 |
| SfaNI | GCATC | 5 cut(s) | 210, 915, 937, 1302, 1633 |
| SfcI | CTRYAG | 2 cut(s) | 843, 1448 |
| SfiI | GGCCNNNNNGGCC | 1 cut(s) | 1613 |
| SfoI | GGCGCC | 1 cut(s) | 1218 |
| SinI | GGWCC | 2 cut(s) | 212, 494 |
| SmaI | CCCGGG | 1 cut(s) | 763 |
| SmlI | CTYRAG | 1 cut(s) | 1688 |
| SmoI | CTYRAG | 1 cut(s) | 1688 |
| Sse9I | AATT | 4 cut(s) | 176, 539, 1458, 1478 |
| SseBI | AGGCCT | 1 cut(s) | 849 |
| SspDI | GGCGCC | 1 cut(s) | 1216 |
| SspMI | CTAG | 4 cut(s) | 609, 1206, 1418, 1574 |
| StuI | AGGCCT | 1 cut(s) | 849 |
| StyD4I | CCNGG | 6 cut(s) | 142, 354, 760, 761, 918, 1658 |
| StyI | CCWWGG | 5 cut(s) | 552, 980, 1069, 1434, 1629 |
| TaaI | ACNGT | 8 cut(s) | 107, 119, 155, 160, 502, 871, 964, 1403 |
| TaiI | ACGT | 2 cut(s) | 1329, 1561 |
| TaqI | TCGA | 4 cut(s) | 31, 408, 526, 543 |
| TasI | AATT | 4 cut(s) | 176, 539, 1458, 1478 |
| TatI | WGTACW | 2 cut(s) | 155, 728 |
| TfiI | GAWTC | 2 cut(s) | 653, 1520 |
| Tru1I | TTAA | 3 cut(s) | 852, 1358, 1620 |
| Tru9I | TTAA | 3 cut(s) | 852, 1358, 1620 |
| TscAI | CASTG | 3 cut(s) | 112, 294, 1066 |
| TseFI | GTSAC | 3 cut(s) | 101, 1009, 1118 |
| Tsp45I | GTSAC | 3 cut(s) | 101, 1009, 1118 |
| TspDTI | ATGAA | 2 cut(s) | 1337, 1349 |
| TspMI | CCCGGG | 1 cut(s) | 761 |
| TspRI | CASTG | 3 cut(s) | 112, 294, 1066 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1086 |
| VneI | GTGCAC | 2 cut(s) | 335, 1151 |
| VpaK11BI | GGWCC | 2 cut(s) | 212, 494 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1042 |
| XapI | RAATTY | 1 cut(s) | 539 |
| XbaI | TCTAGA | 1 cut(s) | 1573 |
| XceI | RCATGY | 1 cut(s) | 442 |
| XmaI | CCCGGG | 1 cut(s) | 761 |
| XspI | CTAG | 4 cut(s) | 609, 1206, 1418, 1574 |
| ZrmI | AGTACT | 1 cut(s) | 157 |
| Zsp2I | ATGCAT | 1 cut(s) | 930 |