Putative gypsy type transposon
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 360 |
| Acc36I | ACCTGC | 2 cut(s) | 1048, 1782 |
| AccB1I | GGYRCC | 3 cut(s) | 321, 683, 1660 |
| AccB7I | CCANNNNNTGG | 4 cut(s) | 295, 507, 889, 936 |
| AccBSI | CCGCTC | 3 cut(s) | 592, 1927, 1954 |
| AccI | GTMKAC | 1 cut(s) | 1991 |
| AccII | CGCG | 9 cut(s) | 535, 815, 849, 1308, 1315, 1467, 1794, 1898, 2412 |
| AccIII | TCCGGA | 2 cut(s) | 49, 386 |
| AclWI | GGATC | 8 cut(s) | 247, 397, 799, 1170, 1183, 1838, 1851, 2320 |
| AcoI | YGGCCR | 6 cut(s) | 286, 1683, 1869, 2064, 2301, 2355 |
| AcsI | RAATTY | 2 cut(s) | 226, 420 |
| AcuI | CTGAAG | 7 cut(s) | 414, 648, 758, 1786, 1999, 2315, 2421 |
| AcyI | GRCGYC | 4 cut(s) | 36, 357, 1443, 1812 |
| AfeI | AGCGCT | 1 cut(s) | 208 |
| AflIII | ACRYGT | 3 cut(s) | 335, 533, 933 |
| AgsI | TTSAA | 1 cut(s) | 1412 |
| AjiI | CACGTC | 3 cut(s) | 336, 1855, 2070 |
| AjnI | CCWGG | 7 cut(s) | 665, 675, 1041, 1077, 1485, 2142, 2238 |
| AluBI | AGCT | 4 cut(s) | 114, 1093, 2098, 2215 |
| AluI | AGCT | 4 cut(s) | 114, 1093, 2098, 2215 |
| Alw21I | GWGCWC | 3 cut(s) | 834, 1704, 2100 |
| Alw26I | GTCTC | 6 cut(s) | 121, 1184, 1249, 1484, 1535, 1764 |
| Alw44I | GTGCAC | 2 cut(s) | 830, 1700 |
| AlwI | GGATC | 8 cut(s) | 247, 397, 799, 1170, 1183, 1838, 1851, 2320 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 295, 2239 |
| Ama87I | CYCGRG | 4 cut(s) | 1290, 1767, 1838, 2082 |
| Aor13HI | TCCGGA | 2 cut(s) | 49, 386 |
| Aor51HI | AGCGCT | 1 cut(s) | 208 |
| ApaLI | GTGCAC | 2 cut(s) | 830, 1700 |
| ApoI | RAATTY | 2 cut(s) | 226, 420 |
| AseI | ATTAAT | 1 cut(s) | 693 |
| AspLEI | GCGC | 8 cut(s) | 209, 955, 1087, 1315, 1469, 1552, 1719, 2414 |
| AspS9I | GGNCC | 6 cut(s) | 670, 989, 1134, 1462, 2140, 2236 |
| AsuC2I | CCSGG | 6 cut(s) | 173, 759, 1422, 1507, 2083, 2084 |
| AsuHPI | GGTGA | 9 cut(s) | 211, 778, 868, 1543, 1622, 1726, 1934, 2162, 2390 |
| AsuII | TTCGAA | 1 cut(s) | 91 |
| AsuNHI | GCTAGC | 1 cut(s) | 1433 |
| AvaI | CYCGRG | 4 cut(s) | 1290, 1767, 1838, 2082 |
| AvaII | GGWCC | 5 cut(s) | 670, 989, 1134, 1462, 2236 |
| BaeGI | GKGCMC | 4 cut(s) | 326, 834, 1704, 2034 |
| BalI | TGGCCA | 2 cut(s) | 288, 2066 |
| BamHI | GGATCC | 2 cut(s) | 1175, 1843 |
| BanI | GGYRCC | 3 cut(s) | 321, 683, 1660 |
| BanII | GRGCYC | 2 cut(s) | 1768, 2100 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 72, 104 |
| BauI | CACGAG | 5 cut(s) | 155, 833, 1401, 1873, 2051 |
| BbsI | GAAGAC | 3 cut(s) | 1352, 1529, 1815 |
| Bbv12I | GWGCWC | 3 cut(s) | 834, 1704, 2100 |
| BccI | CCATC | 4 cut(s) | 674, 1608, 1913, 1950 |
| BceAI | ACGGC | 5 cut(s) | 98, 710, 812, 1391, 2384 |
| BciT130I | CCWGG | 7 cut(s) | 667, 677, 1043, 1079, 1487, 2144, 2240 |
| BcnI | CCSGG | 6 cut(s) | 173, 759, 1422, 1507, 2083, 2084 |
| BcoDI | GTCTC | 6 cut(s) | 121, 1184, 1249, 1484, 1535, 1764 |
| BfaI | CTAG | 5 cut(s) | 479, 549, 1434, 1883, 2349 |
| BfoI | RGCGCY | 4 cut(s) | 210, 956, 1088, 1553 |
| BfuAI | ACCTGC | 2 cut(s) | 1048, 1782 |
| BglI | GCCNNNNNGGC | 2 cut(s) | 1820, 1829 |
| BlpI | GCTNAGC | 1 cut(s) | 1553 |
| BmcAI | AGTACT | 1 cut(s) | 235 |
| Bme18I | GGWCC | 5 cut(s) | 670, 989, 1134, 1462, 2236 |
| BmeT110I | CYCGRG | 4 cut(s) | 1290, 1767, 1838, 2082 |
| BmgBI | CACGTC | 3 cut(s) | 336, 1855, 2070 |
| BmgT120I | GGNCC | 6 cut(s) | 670, 989, 1134, 1462, 2140, 2236 |
| BmsI | GCATC | 5 cut(s) | 861, 936, 1633, 1682, 2176 |
| BmtI | GCTAGC | 1 cut(s) | 1437 |
| BpiI | GAAGAC | 3 cut(s) | 1352, 1529, 1815 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 785, 817 |
| BpmI | CTGGAG | 3 cut(s) | 659, 1508, 2393 |
| Bpu10I | CCTNAGC | 1 cut(s) | 2099 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1553 |
| Bpu14I | TTCGAA | 1 cut(s) | 91 |
| BpuEI | CTTGAG | 1 cut(s) | 145 |
| BpuMI | CCSGG | 6 cut(s) | 173, 759, 1422, 1507, 2083, 2084 |
| BsaAI | YACGTR | 1 cut(s) | 1033 |
| BsaHI | GRCGYC | 4 cut(s) | 36, 357, 1443, 1812 |
| BsaI | GGTCTC | 3 cut(s) | 1249, 1484, 1764 |
| BsaWI | WCCGGW | 3 cut(s) | 49, 386, 1570 |
| BsaXI | ACNNNNNCTCC | 8 cut(s) | 44, 74, 1181, 1211, 1481, 1511, 1922, 1952 |
| Bse118I | RCCGGY | 2 cut(s) | 732, 1681 |
| BseAI | TCCGGA | 2 cut(s) | 49, 386 |
| BseBI | CCWGG | 7 cut(s) | 667, 677, 1043, 1079, 1487, 2144, 2240 |
| BseGI | GGATG | 3 cut(s) | 280, 685, 1735 |
| BseMII | CTCAG | 7 cut(s) | 648, 1058, 1097, 1532, 1554, 2113, 2384 |
| BseRI | GAGGAG | 2 cut(s) | 806, 2120 |
| BseSI | GKGCMC | 4 cut(s) | 326, 834, 1704, 2034 |
| BseYI | CCCAGC | 3 cut(s) | 1371, 1695, 1720 |
| BsgI | GTGCAG | 4 cut(s) | 474, 630, 995, 2033 |
| Bsh1236I | CGCG | 9 cut(s) | 535, 815, 849, 1308, 1315, 1467, 1794, 1898, 2412 |
| Bsh1285I | CGRYCG | 3 cut(s) | 1991, 1995, 2421 |
| BshNI | GGYRCC | 3 cut(s) | 321, 683, 1660 |
| BsiEI | CGRYCG | 3 cut(s) | 1991, 1995, 2421 |
| BsiHKAI | GWGCWC | 3 cut(s) | 834, 1704, 2100 |
| BsiHKCI | CYCGRG | 4 cut(s) | 1290, 1767, 1838, 2082 |
| BslFI | GGGAC | 7 cut(s) | 85, 192, 524, 1002, 1147, 2141, 2266 |
| BsmAI | GTCTC | 6 cut(s) | 121, 1184, 1249, 1484, 1535, 1764 |
| BsmBI | CGTCTC | 2 cut(s) | 1184, 1535 |
| BsmFI | GGGAC | 7 cut(s) | 85, 192, 524, 1002, 1147, 2141, 2266 |
| Bso31I | GGTCTC | 3 cut(s) | 1249, 1484, 1764 |
| BsoBI | CYCGRG | 4 cut(s) | 1290, 1767, 1838, 2082 |
| Bsp119I | TTCGAA | 1 cut(s) | 91 |
| Bsp1286I | GDGCHC | 6 cut(s) | 326, 834, 1704, 1768, 2034, 2100 |
| Bsp13I | TCCGGA | 2 cut(s) | 49, 386 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1553 |
| Bsp19I | CCATGG | 1 cut(s) | 1458 |
| Bsp68I | TCGCGA | 1 cut(s) | 849 |
| BspCNI | CTCAG | 7 cut(s) | 649, 1059, 1098, 1531, 1555, 2112, 2385 |
| BspEI | TCCGGA | 2 cut(s) | 49, 386 |
| BspFNI | CGCG | 9 cut(s) | 535, 815, 849, 1308, 1315, 1467, 1794, 1898, 2412 |
| BspMI | ACCTGC | 2 cut(s) | 1048, 1782 |
| BspOI | GCTAGC | 1 cut(s) | 1437 |
| BspPI | GGATC | 8 cut(s) | 247, 397, 799, 1170, 1183, 1838, 1851, 2320 |
| BspQI | GCTCTTC | 1 cut(s) | 582 |
| BspT104I | TTCGAA | 1 cut(s) | 91 |
| BspT107I | GGYRCC | 3 cut(s) | 321, 683, 1660 |
| BspTNI | GGTCTC | 3 cut(s) | 1249, 1484, 1764 |
| BsrBI | CCGCTC | 3 cut(s) | 592, 1927, 1954 |
| BsrFI | RCCGGY | 2 cut(s) | 732, 1681 |
| BssAI | RCCGGY | 2 cut(s) | 732, 1681 |
| BssNI | GRCGYC | 4 cut(s) | 36, 357, 1443, 1812 |
| BssSI | CACGAG | 5 cut(s) | 155, 833, 1401, 1873, 2051 |
| BssT1I | CCWWGG | 1 cut(s) | 1458 |
| Bst2BI | CACGAG | 5 cut(s) | 155, 833, 1401, 1873, 2051 |
| Bst2UI | CCWGG | 7 cut(s) | 667, 677, 1043, 1079, 1487, 2144, 2240 |
| Bst6I | CTCTTC | 3 cut(s) | 106, 582, 1293 |
| BstACI | GRCGYC | 4 cut(s) | 36, 357, 1443, 1812 |
| BstBAI | YACGTR | 1 cut(s) | 1033 |
| BstBI | TTCGAA | 1 cut(s) | 91 |
| BstDSI | CCRYGG | 4 cut(s) | 506, 813, 1458, 2206 |
| BstEII | GGTNACC | 1 cut(s) | 856 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 2177 |
| BstF5I | GGATG | 3 cut(s) | 280, 685, 1735 |
| BstFNI | CGCG | 9 cut(s) | 535, 815, 849, 1308, 1315, 1467, 1794, 1898, 2412 |
| BstH2I | RGCGCY | 4 cut(s) | 210, 956, 1088, 1553 |
| BstHHI | GCGC | 8 cut(s) | 209, 955, 1087, 1315, 1469, 1552, 1719, 2414 |
| BstMAI | GTCTC | 6 cut(s) | 121, 1184, 1249, 1484, 1535, 1764 |
| BstMCI | CGRYCG | 3 cut(s) | 1991, 1995, 2421 |
| BstNI | CCWGG | 7 cut(s) | 667, 677, 1043, 1079, 1487, 2144, 2240 |
| BstNSI | RCATGY | 1 cut(s) | 937 |
| BstPI | GGTNACC | 1 cut(s) | 856 |
| BstSLI | GKGCMC | 4 cut(s) | 326, 834, 1704, 2034 |
| BstUI | CGCG | 9 cut(s) | 535, 815, 849, 1308, 1315, 1467, 1794, 1898, 2412 |
| BstV2I | GAAGAC | 3 cut(s) | 1352, 1529, 1815 |
| BstX2I | RGATCY | 4 cut(s) | 389, 1175, 1843, 2325 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1633 |
| BstYI | RGATCY | 4 cut(s) | 389, 1175, 1843, 2325 |
| BtgI | CCRYGG | 4 cut(s) | 506, 813, 1458, 2206 |
| BtrI | CACGTC | 3 cut(s) | 336, 1855, 2070 |
| BtsCI | GGATG | 3 cut(s) | 280, 685, 1735 |
| BtsI | GCAGTG | 3 cut(s) | 382, 464, 1444 |
| BtsIMutI | CAGTG | 6 cut(s) | 382, 464, 622, 1444, 1719, 1781 |
| BtuMI | TCGCGA | 1 cut(s) | 849 |
| BveI | ACCTGC | 2 cut(s) | 1048, 1782 |
| CaiI | CAGNNNCTG | 2 cut(s) | 295, 2239 |
| CfoI | GCGC | 8 cut(s) | 209, 955, 1087, 1315, 1469, 1552, 1719, 2414 |
| Cfr10I | RCCGGY | 2 cut(s) | 732, 1681 |
| Cfr13I | GGNCC | 6 cut(s) | 670, 989, 1134, 1462, 2140, 2236 |
| Cfr42I | CCGCGG | 1 cut(s) | 816 |
| Cfr9I | CCCGGG | 1 cut(s) | 2082 |
| CseI | GACGC | 7 cut(s) | 44, 183, 524, 1451, 1552, 1820, 2201 |
| CviAII | CATG | 7 cut(s) | 284, 934, 1117, 1256, 1459, 1495, 1585 |
| EaeI | YGGCCR | 6 cut(s) | 286, 1683, 1869, 2064, 2301, 2355 |
| Eam1104I | CTCTTC | 3 cut(s) | 106, 582, 1293 |
| EarI | CTCTTC | 3 cut(s) | 106, 582, 1293 |
| EciI | GGCGGA | 4 cut(s) | 768, 1016, 1348, 1824 |
| Ecl136II | GAGCTC | 1 cut(s) | 2098 |
| Eco130I | CCWWGG | 1 cut(s) | 1458 |
| Eco147I | AGGCCT | 1 cut(s) | 800 |
| Eco24I | GRGCYC | 2 cut(s) | 1768, 2100 |
| Eco31I | GGTCTC | 3 cut(s) | 1249, 1484, 1764 |
| Eco47I | GGWCC | 5 cut(s) | 670, 989, 1134, 1462, 2236 |
| Eco47III | AGCGCT | 1 cut(s) | 208 |
| Eco53kI | GAGCTC | 1 cut(s) | 2098 |
| Eco57I | CTGAAG | 7 cut(s) | 414, 648, 758, 1786, 1999, 2315, 2421 |
| Eco88I | CYCGRG | 4 cut(s) | 1290, 1767, 1838, 2082 |
| Eco91I | GGTNACC | 1 cut(s) | 856 |
| EcoICRI | GAGCTC | 1 cut(s) | 2098 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 2177 |
| EcoO109I | RGGNCCY | 3 cut(s) | 670, 1134, 2236 |
| EcoO65I | GGTNACC | 1 cut(s) | 856 |
| EcoRII | CCWGG | 7 cut(s) | 665, 675, 1041, 1077, 1485, 2142, 2238 |
| EcoT14I | CCWWGG | 1 cut(s) | 1458 |
| EcoT38I | GRGCYC | 2 cut(s) | 1768, 2100 |
| ErhI | CCWWGG | 1 cut(s) | 1458 |
| Esp3I | CGTCTC | 2 cut(s) | 1184, 1535 |
| FaeI | CATG | 7 cut(s) | 287, 937, 1120, 1259, 1462, 1498, 1588 |
| FaqI | GGGAC | 7 cut(s) | 85, 192, 524, 1002, 1147, 2141, 2266 |
| FatI | CATG | 7 cut(s) | 283, 933, 1116, 1255, 1458, 1494, 1584 |
| FblI | GTMKAC | 1 cut(s) | 1991 |
| FokI | GGATG | 3 cut(s) | 287, 692, 1742 |
| FriOI | GRGCYC | 2 cut(s) | 1768, 2100 |
| FspBI | CTAG | 5 cut(s) | 479, 549, 1434, 1883, 2349 |
| GlaI | GCGC | 8 cut(s) | 208, 954, 1086, 1314, 1468, 1551, 1718, 2413 |
| GsaI | CCCAGC | 3 cut(s) | 1375, 1699, 1724 |
| GsuI | CTGGAG | 3 cut(s) | 659, 1508, 2393 |
| HaeII | RGCGCY | 4 cut(s) | 210, 956, 1088, 1553 |
| HgaI | GACGC | 7 cut(s) | 44, 183, 524, 1451, 1552, 1820, 2201 |
| HhaI | GCGC | 8 cut(s) | 209, 955, 1087, 1315, 1469, 1552, 1719, 2414 |
| Hin1I | GRCGYC | 4 cut(s) | 36, 357, 1443, 1812 |
| Hin1II | CATG | 7 cut(s) | 287, 937, 1120, 1259, 1462, 1498, 1588 |
| Hin6I | GCGC | 8 cut(s) | 207, 953, 1085, 1313, 1467, 1550, 1717, 2412 |
| HinP1I | GCGC | 8 cut(s) | 207, 953, 1085, 1313, 1467, 1550, 1717, 2412 |
| HincII | GTYRAC | 3 cut(s) | 730, 1992, 2002 |
| HindII | GTYRAC | 3 cut(s) | 730, 1992, 2002 |
| HphI | GGTGA | 9 cut(s) | 211, 778, 868, 1543, 1622, 1726, 1934, 2162, 2390 |
| Hpy188I | TCNGA | 7 cut(s) | 252, 394, 1213, 1322, 1521, 1564, 1852 |
| Hpy188III | TCNNGA | 8 cut(s) | 50, 212, 387, 539, 848, 1099, 1292, 1769 |
| HpyAV | CCTTC | 8 cut(s) | 623, 790, 1147, 1813, 1857, 2023, 2339, 2396 |
| HpyCH4IV | ACGT | 7 cut(s) | 335, 357, 513, 1032, 1196, 1854, 2069 |
| HpyCH4V | TGCA | 9 cut(s) | 455, 530, 611, 832, 1012, 1050, 1702, 2050, 2122 |
| HpySE526I | ACGT | 7 cut(s) | 335, 357, 513, 1032, 1196, 1854, 2069 |
| Hsp92I | GRCGYC | 4 cut(s) | 36, 357, 1443, 1812 |
| Hsp92II | CATG | 7 cut(s) | 287, 937, 1120, 1259, 1462, 1498, 1588 |
| HspAI | GCGC | 8 cut(s) | 207, 953, 1085, 1313, 1467, 1550, 1717, 2412 |
| Kpn2I | TCCGGA | 2 cut(s) | 49, 386 |
| KroI | GCCGGC | 1 cut(s) | 1681 |
| KroNI | GCCGGC | 1 cut(s) | 1683 |
| KspI | CCGCGG | 1 cut(s) | 816 |
| LguI | GCTCTTC | 1 cut(s) | 582 |
| LmnI | GCTCC | 7 cut(s) | 1082, 1749, 1837, 2164, 2269, 2292, 2406 |
| LweI | GCATC | 5 cut(s) | 861, 936, 1633, 1682, 2176 |
| MaeI | CTAG | 5 cut(s) | 479, 549, 1434, 1883, 2349 |
| MaeII | ACGT | 7 cut(s) | 335, 357, 513, 1032, 1196, 1854, 2069 |
| MaeIII | GTNAC | 6 cut(s) | 23, 856, 1439, 1610, 1732, 2189 |
| MbiI | CCGCTC | 3 cut(s) | 592, 1927, 1954 |
| MboII | GAAGA | 8 cut(s) | 93, 599, 1307, 1310, 1352, 1534, 1792, 1820 |
| MflI | RGATCY | 4 cut(s) | 389, 1175, 1843, 2325 |
| MhlI | GDGCHC | 6 cut(s) | 326, 834, 1704, 1768, 2034, 2100 |
| MlsI | TGGCCA | 2 cut(s) | 288, 2066 |
| MluCI | AATT | 7 cut(s) | 161, 226, 420, 770, 1473, 2255, 2440 |
| MluI | ACGCGT | 1 cut(s) | 533 |
| MluNI | TGGCCA | 2 cut(s) | 288, 2066 |
| MlyI | GAGTC | 8 cut(s) | 425, 668, 784, 1078, 1282, 1393, 1880, 2441 |
| MmeI | TCCRAC | 5 cut(s) | 1140, 1191, 1203, 1727, 2247 |
| Mox20I | TGGCCA | 2 cut(s) | 288, 2066 |
| MroI | TCCGGA | 2 cut(s) | 49, 386 |
| MroNI | GCCGGC | 1 cut(s) | 1681 |
| MscI | TGGCCA | 2 cut(s) | 288, 2066 |
| MseI | TTAA | 5 cut(s) | 45, 110, 693, 1206, 2364 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1631 |
| Msp20I | TGGCCA | 2 cut(s) | 288, 2066 |
| MspA1I | CMGCKG | 7 cut(s) | 569, 815, 868, 1250, 1724, 2335, 2426 |
| MvaI | CCWGG | 7 cut(s) | 667, 677, 1043, 1079, 1487, 2144, 2240 |
| MvnI | CGCG | 9 cut(s) | 535, 815, 849, 1308, 1315, 1467, 1794, 1898, 2412 |
| NaeI | GCCGGC | 1 cut(s) | 1683 |
| NciI | CCSGG | 6 cut(s) | 173, 759, 1422, 1507, 2083, 2084 |
| NcoI | CCATGG | 1 cut(s) | 1458 |
| NgoMIV | GCCGGC | 1 cut(s) | 1681 |
| NheI | GCTAGC | 1 cut(s) | 1433 |
| NlaIII | CATG | 7 cut(s) | 287, 937, 1120, 1259, 1462, 1498, 1588 |
| NmeAIII | GCCGAG | 1 cut(s) | 2383 |
| NmuCI | GTSAC | 5 cut(s) | 856, 1439, 1610, 1732, 2189 |
| NruI | TCGCGA | 1 cut(s) | 849 |
| NspI | RCATGY | 1 cut(s) | 937 |
| NspV | TTCGAA | 1 cut(s) | 91 |
| PaeR7I | CTCGAG | 2 cut(s) | 1290, 1767 |
| PceI | AGGCCT | 1 cut(s) | 800 |
| PciI | ACATGT | 1 cut(s) | 933 |
| PciSI | GCTCTTC | 1 cut(s) | 582 |
| PcsI | WCGNNNNNNNCGW | 5 cut(s) | 88, 440, 532, 1765, 1856 |
| PdiI | GCCGGC | 1 cut(s) | 1683 |
| PfeI | GAWTC | 5 cut(s) | 64, 383, 1112, 1336, 2339 |
| PflMI | CCANNNNNTGG | 4 cut(s) | 295, 507, 889, 936 |
| PfoI | TCCNGGA | 2 cut(s) | 675, 1485 |
| PleI | GAGTC | 8 cut(s) | 425, 667, 783, 1077, 1282, 1393, 1880, 2440 |
| PpsI | GAGTC | 8 cut(s) | 425, 667, 783, 1077, 1282, 1393, 1880, 2440 |
| Ppu21I | YACGTR | 1 cut(s) | 1033 |
| PpuMI | RGGWCCY | 3 cut(s) | 670, 1134, 2236 |
| PscI | ACATGT | 1 cut(s) | 933 |
| PshBI | ATTAAT | 1 cut(s) | 693 |
| Psp124BI | GAGCTC | 1 cut(s) | 2100 |
| Psp5II | RGGWCCY | 3 cut(s) | 670, 1134, 2236 |
| Psp6I | CCWGG | 7 cut(s) | 665, 675, 1041, 1077, 1485, 2142, 2238 |
| PspEI | GGTNACC | 1 cut(s) | 856 |
| PspFI | CCCAGC | 3 cut(s) | 1371, 1695, 1720 |
| PspGI | CCWGG | 7 cut(s) | 665, 675, 1041, 1077, 1485, 2142, 2238 |
| PspPI | GGNCC | 6 cut(s) | 670, 989, 1134, 1462, 2140, 2236 |
| PspPPI | RGGWCCY | 3 cut(s) | 670, 1134, 2236 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 1892, 1924 |
| PstNI | CAGNNNCTG | 2 cut(s) | 295, 2239 |
| PsuI | RGATCY | 4 cut(s) | 389, 1175, 1843, 2325 |
| RruI | TCGCGA | 1 cut(s) | 849 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1631 |
| SacI | GAGCTC | 1 cut(s) | 2100 |
| SacII | CCGCGG | 1 cut(s) | 816 |
| SalI | GTCGAC | 1 cut(s) | 1990 |
| SapI | GCTCTTC | 1 cut(s) | 582 |
| SaqAI | TTAA | 5 cut(s) | 45, 110, 693, 1206, 2364 |
| Sau96I | GGNCC | 6 cut(s) | 670, 989, 1134, 1462, 2140, 2236 |
| ScaI | AGTACT | 1 cut(s) | 235 |
| SchI | GAGTC | 8 cut(s) | 425, 668, 784, 1078, 1282, 1393, 1880, 2441 |
| SduI | GDGCHC | 6 cut(s) | 326, 834, 1704, 1768, 2034, 2100 |
| SfaNI | GCATC | 5 cut(s) | 861, 936, 1633, 1682, 2176 |
| Sfr274I | CTCGAG | 2 cut(s) | 1290, 1767 |
| Sfr303I | CCGCGG | 1 cut(s) | 816 |
| SfuI | TTCGAA | 1 cut(s) | 91 |
| SgrBI | CCGCGG | 1 cut(s) | 816 |
| SinI | GGWCC | 5 cut(s) | 670, 989, 1134, 1462, 2236 |
| SlaI | CTCGAG | 2 cut(s) | 1290, 1767 |
| SmaI | CCCGGG | 1 cut(s) | 2084 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1631 |
| SmlI | CTYRAG | 3 cut(s) | 124, 1290, 1767 |
| SmoI | CTYRAG | 3 cut(s) | 124, 1290, 1767 |
| Sse9I | AATT | 7 cut(s) | 161, 226, 420, 770, 1473, 2255, 2440 |
| SseBI | AGGCCT | 1 cut(s) | 800 |
| SspMI | CTAG | 5 cut(s) | 479, 549, 1434, 1883, 2349 |
| SstI | GAGCTC | 1 cut(s) | 2100 |
| StuI | AGGCCT | 1 cut(s) | 800 |
| StyI | CCWWGG | 1 cut(s) | 1458 |
| TaiI | ACGT | 7 cut(s) | 338, 360, 516, 1035, 1199, 1857, 2072 |
| TaqI | TCGA | 9 cut(s) | 91, 197, 803, 1098, 1291, 1386, 1768, 1991, 2072 |
| TaqII | GACCGA | 1 cut(s) | 1231 |
| TasI | AATT | 7 cut(s) | 161, 226, 420, 770, 1473, 2255, 2440 |
| TatI | WGTACW | 1 cut(s) | 233 |
| TfiI | GAWTC | 5 cut(s) | 64, 383, 1112, 1336, 2339 |
| Tru1I | TTAA | 5 cut(s) | 45, 110, 693, 1206, 2364 |
| Tru9I | TTAA | 5 cut(s) | 45, 110, 693, 1206, 2364 |
| TscAI | CASTG | 6 cut(s) | 382, 471, 622, 1444, 1719, 1788 |
| TseFI | GTSAC | 5 cut(s) | 856, 1439, 1610, 1732, 2189 |
| Tsp45I | GTSAC | 5 cut(s) | 856, 1439, 1610, 1732, 2189 |
| TspDTI | ATGAA | 1 cut(s) | 258 |
| TspGWI | ACGGA | 2 cut(s) | 432, 2260 |
| TspMI | CCCGGG | 1 cut(s) | 2082 |
| TspRI | CASTG | 6 cut(s) | 382, 471, 622, 1444, 1719, 1788 |
| Van91I | CCANNNNNTGG | 4 cut(s) | 295, 507, 889, 936 |
| VneI | GTGCAC | 2 cut(s) | 830, 1700 |
| VpaK11BI | GGWCC | 5 cut(s) | 670, 989, 1134, 1462, 2236 |
| VspI | ATTAAT | 1 cut(s) | 693 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 2177 |
| XapI | RAATTY | 2 cut(s) | 226, 420 |
| XceI | RCATGY | 1 cut(s) | 937 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 1156, 1601 |
| XhoI | CTCGAG | 2 cut(s) | 1290, 1767 |
| XmaI | CCCGGG | 1 cut(s) | 2082 |
| XmiI | GTMKAC | 1 cut(s) | 1991 |
| XspI | CTAG | 5 cut(s) | 479, 549, 1434, 1883, 2349 |
| ZraI | GACGTC | 1 cut(s) | 358 |
| ZrmI | AGTACT | 1 cut(s) | 235 |