Putative gypsy type transposon
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 12 |
| Acc65I | GGTACC | 1 cut(s) | 1315 |
| AccB1I | GGYRCC | 4 cut(s) | 335, 523, 1276, 1315 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 159, 588 |
| AccBSI | CCGCTC | 6 cut(s) | 884, 1557, 1633, 1771, 1912, 1933 |
| AccI | GTMKAC | 2 cut(s) | 1373, 1670 |
| AccII | CGCG | 9 cut(s) | 62, 187, 479, 501, 924, 1018, 1083, 1262, 1282 |
| AccIII | TCCGGA | 2 cut(s) | 38, 190 |
| AclI | AACGTT | 1 cut(s) | 1899 |
| AclWI | GGATC | 8 cut(s) | 49, 532, 566, 1086, 1980, 1999, 2043, 2062 |
| AcoI | YGGCCR | 2 cut(s) | 1980, 2043 |
| AcsI | RAATTY | 1 cut(s) | 73 |
| AcuI | CTGAAG | 5 cut(s) | 66, 410, 1403, 1678, 2057 |
| AcyI | GRCGYC | 4 cut(s) | 9, 1277, 1748, 1881 |
| AfaI | GTAC | 6 cut(s) | 683, 776, 896, 1317, 1408, 1552 |
| AflIII | ACRYGT | 4 cut(s) | 585, 1016, 1956, 2019 |
| AgsI | TTSAA | 1 cut(s) | 58 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 769 |
| AjiI | CACGTC | 2 cut(s) | 1534, 1714 |
| AjnI | CCWGG | 3 cut(s) | 540, 1740, 1761 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1596, 1628 |
| Alw21I | GWGCWC | 4 cut(s) | 246, 486, 1175, 1779 |
| Alw26I | GTCTC | 4 cut(s) | 756, 980, 1022, 1151 |
| Alw44I | GTGCAC | 1 cut(s) | 482 |
| AlwI | GGATC | 8 cut(s) | 49, 532, 566, 1086, 1980, 1999, 2043, 2062 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 541, 1513 |
| Ama87I | CYCGRG | 3 cut(s) | 1154, 1310, 1517 |
| Aor13HI | TCCGGA | 2 cut(s) | 38, 190 |
| ApaI | GGGCCC | 1 cut(s) | 1483 |
| ApaLI | GTGCAC | 1 cut(s) | 482 |
| ApeKI | GCWGC | 9 cut(s) | 142, 145, 221, 424, 994, 1391, 1647, 1966, 2029 |
| ApoI | RAATTY | 1 cut(s) | 73 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1417, 1449 |
| Asp718I | GGTACC | 1 cut(s) | 1315 |
| AspLEI | GCGC | 8 cut(s) | 607, 739, 1085, 1135, 1168, 1262, 1279, 1297 |
| AspS9I | GGNCC | 8 cut(s) | 469, 641, 1254, 1308, 1479, 1480, 1795, 1819 |
| AsuC2I | CCSGG | 5 cut(s) | 985, 1123, 1311, 1312, 1477 |
| AsuHPI | GGTGA | 6 cut(s) | 430, 1238, 1342, 1465, 1613, 1613 |
| AvaI | CYCGRG | 3 cut(s) | 1154, 1310, 1517 |
| AvaII | GGWCC | 2 cut(s) | 641, 1254 |
| BaeGI | GKGCMC | 5 cut(s) | 486, 528, 581, 1483, 1713 |
| BanI | GGYRCC | 4 cut(s) | 335, 523, 1276, 1315 |
| BanII | GRGCYC | 3 cut(s) | 1175, 1483, 1779 |
| BauI | CACGAG | 1 cut(s) | 906 |
| Bbv12I | GWGCWC | 4 cut(s) | 246, 486, 1175, 1779 |
| BbvI | GCAGC | 9 cut(s) | 129, 132, 208, 411, 981, 1378, 1659, 1953, 2016 |
| BccI | CCATC | 1 cut(s) | 884 |
| BceAI | ACGGC | 8 cut(s) | 349, 362, 819, 1007, 1038, 1354, 1416, 1703 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1853, 1887 |
| BciT130I | CCWGG | 3 cut(s) | 542, 1742, 1763 |
| BciVI | GTATCC | 1 cut(s) | 298 |
| BcnI | CCSGG | 5 cut(s) | 985, 1123, 1311, 1312, 1477 |
| BcoDI | GTCTC | 4 cut(s) | 756, 980, 1022, 1151 |
| BfaI | CTAG | 5 cut(s) | 131, 201, 248, 1103, 2009 |
| BfmI | CTRYAG | 5 cut(s) | 146, 533, 1034, 1539, 1799 |
| BfoI | RGCGCY | 5 cut(s) | 608, 740, 1169, 1280, 1298 |
| BfuI | GTATCC | 1 cut(s) | 298 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 2096 |
| BlpI | GCTNAGC | 1 cut(s) | 1169 |
| Bme1390I | CCNGG | 8 cut(s) | 542, 985, 1123, 1311, 1312, 1477, 1742, 1763 |
| Bme18I | GGWCC | 2 cut(s) | 641, 1254 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 769 |
| BmeT110I | CYCGRG | 3 cut(s) | 1154, 1310, 1517 |
| BmgBI | CACGTC | 2 cut(s) | 1534, 1714 |
| BmgT120I | GGNCC | 8 cut(s) | 469, 641, 1254, 1308, 1479, 1480, 1795, 1819 |
| BmrFI | CCNGG | 8 cut(s) | 542, 985, 1123, 1311, 1312, 1477, 1742, 1763 |
| BmsI | GCATC | 3 cut(s) | 191, 1838, 1861 |
| BoxI | GACNNNNGTC | 2 cut(s) | 972, 1676 |
| BpmI | CTGGAG | 2 cut(s) | 1467, 1967 |
| Bpu10I | CCTNAGC | 3 cut(s) | 1778, 1986, 2049 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1169 |
| BpuMI | CCSGG | 5 cut(s) | 985, 1123, 1311, 1312, 1477 |
| BsaAI | YACGTR | 1 cut(s) | 685 |
| BsaHI | GRCGYC | 4 cut(s) | 9, 1277, 1748, 1881 |
| BsaWI | WCCGGW | 3 cut(s) | 38, 190, 402 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 833, 863 |
| Bse118I | RCCGGY | 4 cut(s) | 101, 384, 1256, 1297 |
| Bse1I | ACTGG | 4 cut(s) | 283, 681, 782, 969 |
| Bse3DI | GCAATG | 2 cut(s) | 795, 1080 |
| BseAI | TCCGGA | 2 cut(s) | 38, 190 |
| BseBI | CCWGG | 3 cut(s) | 542, 1742, 1763 |
| BseGI | GGATG | 2 cut(s) | 369, 876 |
| BseMI | GCAATG | 2 cut(s) | 795, 1080 |
| BseMII | CTCAG | 4 cut(s) | 733, 749, 1160, 1792 |
| BseNI | ACTGG | 4 cut(s) | 283, 681, 782, 969 |
| BseRI | GAGGAG | 1 cut(s) | 458 |
| BseSI | GKGCMC | 5 cut(s) | 486, 528, 581, 1483, 1713 |
| BseXI | GCAGC | 9 cut(s) | 129, 132, 208, 411, 981, 1378, 1659, 1953, 2016 |
| BseYI | CCCAGC | 2 cut(s) | 410, 1636 |
| BsgI | GTGCAG | 1 cut(s) | 126 |
| Bsh1236I | CGCG | 9 cut(s) | 62, 187, 479, 501, 924, 1018, 1083, 1262, 1282 |
| Bsh1285I | CGRYCG | 2 cut(s) | 1670, 1674 |
| BshNI | GGYRCC | 4 cut(s) | 335, 523, 1276, 1315 |
| BsiEI | CGRYCG | 2 cut(s) | 1670, 1674 |
| BsiHKAI | GWGCWC | 4 cut(s) | 246, 486, 1175, 1779 |
| BsiHKCI | CYCGRG | 3 cut(s) | 1154, 1310, 1517 |
| BslFI | GGGAC | 5 cut(s) | 176, 1267, 1820, 1945, 2008 |
| BsmAI | GTCTC | 4 cut(s) | 756, 980, 1022, 1151 |
| BsmBI | CGTCTC | 2 cut(s) | 980, 1151 |
| BsmFI | GGGAC | 5 cut(s) | 176, 1267, 1820, 1945, 2008 |
| BsoBI | CYCGRG | 3 cut(s) | 1154, 1310, 1517 |
| Bsp120I | GGGCCC | 1 cut(s) | 1479 |
| Bsp1286I | GDGCHC | 8 cut(s) | 246, 486, 528, 581, 1175, 1483, 1713, 1779 |
| Bsp13I | TCCGGA | 2 cut(s) | 38, 190 |
| Bsp143I | GATC | 9 cut(s) | 41, 537, 558, 747, 1078, 1972, 2004, 2035, 2067 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1169 |
| BspCNI | CTCAG | 4 cut(s) | 732, 750, 1161, 1791 |
| BspEI | TCCGGA | 2 cut(s) | 38, 190 |
| BspFNI | CGCG | 9 cut(s) | 62, 187, 479, 501, 924, 1018, 1083, 1262, 1282 |
| BspHI | TCATGA | 1 cut(s) | 1729 |
| BspMAI | CTGCAG | 1 cut(s) | 150 |
| BspPI | GGATC | 8 cut(s) | 49, 532, 566, 1086, 1980, 1999, 2043, 2062 |
| BspQI | GCTCTTC | 1 cut(s) | 234 |
| BspT107I | GGYRCC | 4 cut(s) | 335, 523, 1276, 1315 |
| BsrBI | CCGCTC | 6 cut(s) | 884, 1557, 1633, 1771, 1912, 1933 |
| BsrDI | GCAATG | 2 cut(s) | 795, 1080 |
| BsrFI | RCCGGY | 4 cut(s) | 101, 384, 1256, 1297 |
| BsrI | ACTGG | 4 cut(s) | 283, 681, 782, 969 |
| BssAI | RCCGGY | 4 cut(s) | 101, 384, 1256, 1297 |
| BssMI | GATC | 9 cut(s) | 41, 537, 558, 747, 1078, 1972, 2004, 2035, 2067 |
| BssNI | GRCGYC | 4 cut(s) | 9, 1277, 1748, 1881 |
| BssSI | CACGAG | 1 cut(s) | 906 |
| BssT1I | CCWWGG | 2 cut(s) | 694, 730 |
| Bst2BI | CACGAG | 1 cut(s) | 906 |
| Bst2UI | CCWGG | 3 cut(s) | 542, 1742, 1763 |
| Bst4CI | ACNGT | 3 cut(s) | 439, 649, 1243 |
| Bst6I | CTCTTC | 5 cut(s) | 234, 386, 909, 1449, 1455 |
| BstACI | GRCGYC | 4 cut(s) | 9, 1277, 1748, 1881 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1513 |
| BstBAI | YACGTR | 1 cut(s) | 685 |
| BstDEI | CTNAG | 8 cut(s) | 719, 758, 1169, 1494, 1778, 1986, 2049, 2100 |
| BstDSI | CCRYGG | 6 cut(s) | 158, 477, 648, 1188, 1280, 1885 |
| BstEII | GGTNACC | 1 cut(s) | 1471 |
| BstF5I | GGATG | 2 cut(s) | 369, 876 |
| BstFNI | CGCG | 9 cut(s) | 62, 187, 479, 501, 924, 1018, 1083, 1262, 1282 |
| BstH2I | RGCGCY | 5 cut(s) | 608, 740, 1169, 1280, 1298 |
| BstHHI | GCGC | 8 cut(s) | 607, 739, 1085, 1135, 1168, 1262, 1279, 1297 |
| BstKTI | GATC | 9 cut(s) | 44, 540, 561, 750, 1081, 1975, 2007, 2038, 2070 |
| BstMAI | GTCTC | 4 cut(s) | 756, 980, 1022, 1151 |
| BstMBI | GATC | 9 cut(s) | 41, 537, 558, 747, 1078, 1972, 2004, 2035, 2067 |
| BstMCI | CGRYCG | 2 cut(s) | 1670, 1674 |
| BstNI | CCWGG | 3 cut(s) | 542, 1742, 1763 |
| BstNSI | RCATGY | 4 cut(s) | 589, 933, 1960, 2023 |
| BstPAI | GACNNNNGTC | 2 cut(s) | 972, 1676 |
| BstPI | GGTNACC | 1 cut(s) | 1471 |
| BstSCI | CCNGG | 8 cut(s) | 540, 983, 1121, 1309, 1310, 1475, 1740, 1761 |
| BstSFI | CTRYAG | 5 cut(s) | 146, 533, 1034, 1539, 1799 |
| BstSLI | GKGCMC | 5 cut(s) | 486, 528, 581, 1483, 1713 |
| BstUI | CGCG | 9 cut(s) | 62, 187, 479, 501, 924, 1018, 1083, 1262, 1282 |
| BstV1I | GCAGC | 9 cut(s) | 129, 132, 208, 411, 981, 1378, 1659, 1953, 2016 |
| BstX2I | RGATCY | 4 cut(s) | 41, 537, 2004, 2067 |
| BstYI | RGATCY | 4 cut(s) | 41, 537, 2004, 2067 |
| BsuI | GTATCC | 1 cut(s) | 298 |
| BtgI | CCRYGG | 6 cut(s) | 158, 477, 648, 1188, 1280, 1885 |
| BtgZI | GCGATG | 3 cut(s) | 168, 1861, 1884 |
| BtrI | CACGTC | 2 cut(s) | 1534, 1714 |
| BtsCI | GGATG | 2 cut(s) | 369, 876 |
| BtsI | GCAGTG | 2 cut(s) | 34, 116 |
| BtsIMutI | CAGTG | 3 cut(s) | 34, 116, 276 |
| CaiI | CAGNNNCTG | 2 cut(s) | 541, 1513 |
| CciI | TCATGA | 1 cut(s) | 1729 |
| CfoI | GCGC | 8 cut(s) | 607, 739, 1085, 1135, 1168, 1262, 1279, 1297 |
| Cfr10I | RCCGGY | 4 cut(s) | 101, 384, 1256, 1297 |
| Cfr13I | GGNCC | 8 cut(s) | 469, 641, 1254, 1308, 1479, 1480, 1795, 1819 |
| Cfr42I | CCGCGG | 2 cut(s) | 480, 1283 |
| Cfr9I | CCCGGG | 1 cut(s) | 1310 |
| CseI | GACGC | 8 cut(s) | 80, 176, 416, 1024, 1067, 1168, 1737, 1889 |
| Csp6I | GTAC | 6 cut(s) | 682, 775, 895, 1316, 1407, 1551 |
| CviAII | CATG | 8 cut(s) | 236, 586, 930, 1111, 1730, 1823, 1957, 2020 |
| CviQI | GTAC | 6 cut(s) | 682, 775, 895, 1316, 1407, 1551 |
| DdeI | CTNAG | 8 cut(s) | 719, 758, 1169, 1494, 1778, 1986, 2049, 2100 |
| DinI | GGCGCC | 1 cut(s) | 1278 |
| DpnI | GATC | 9 cut(s) | 43, 539, 560, 749, 1080, 1974, 2006, 2037, 2069 |
| DpnII | GATC | 9 cut(s) | 41, 537, 558, 747, 1078, 1972, 2004, 2035, 2067 |
| DriI | GACNNNNNGTC | 1 cut(s) | 769 |
| EaeI | YGGCCR | 2 cut(s) | 1980, 2043 |
| Eam1104I | CTCTTC | 5 cut(s) | 234, 386, 909, 1449, 1455 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 769 |
| EarI | CTCTTC | 5 cut(s) | 234, 386, 909, 1449, 1455 |
| EciI | GGCGGA | 4 cut(s) | 80, 420, 668, 2074 |
| Ecl136II | GAGCTC | 2 cut(s) | 1173, 1777 |
| Eco130I | CCWWGG | 2 cut(s) | 694, 730 |
| Eco147I | AGGCCT | 1 cut(s) | 215 |
| Eco24I | GRGCYC | 3 cut(s) | 1175, 1483, 1779 |
| Eco47I | GGWCC | 2 cut(s) | 641, 1254 |
| Eco53kI | GAGCTC | 2 cut(s) | 1173, 1777 |
| Eco57I | CTGAAG | 5 cut(s) | 66, 410, 1403, 1678, 2057 |
| Eco88I | CYCGRG | 3 cut(s) | 1154, 1310, 1517 |
| Eco91I | GGTNACC | 1 cut(s) | 1471 |
| EcoICRI | GAGCTC | 2 cut(s) | 1173, 1777 |
| EcoO109I | RGGNCCY | 2 cut(s) | 641, 1479 |
| EcoO65I | GGTNACC | 1 cut(s) | 1471 |
| EcoRII | CCWGG | 3 cut(s) | 540, 1740, 1761 |
| EcoT14I | CCWWGG | 2 cut(s) | 694, 730 |
| EcoT38I | GRGCYC | 3 cut(s) | 1175, 1483, 1779 |
| EgeI | GGCGCC | 1 cut(s) | 1278 |
| EheI | GGCGCC | 1 cut(s) | 1278 |
| ErhI | CCWWGG | 2 cut(s) | 694, 730 |
| Esp3I | CGTCTC | 2 cut(s) | 980, 1151 |
| FaeI | CATG | 8 cut(s) | 239, 589, 933, 1114, 1733, 1826, 1960, 2023 |
| FaqI | GGGAC | 5 cut(s) | 176, 1267, 1820, 1945, 2008 |
| FatI | CATG | 8 cut(s) | 235, 585, 929, 1110, 1729, 1822, 1956, 2019 |
| FblI | GTMKAC | 2 cut(s) | 1373, 1670 |
| FokI | GGATG | 2 cut(s) | 376, 863 |
| FriOI | GRGCYC | 3 cut(s) | 1175, 1483, 1779 |
| FspBI | CTAG | 5 cut(s) | 131, 201, 248, 1103, 2009 |
| GlaI | GCGC | 8 cut(s) | 606, 738, 1084, 1134, 1167, 1261, 1278, 1296 |
| GsaI | CCCAGC | 2 cut(s) | 414, 1640 |
| GsuI | CTGGAG | 2 cut(s) | 1467, 1967 |
| HaeII | RGCGCY | 5 cut(s) | 608, 740, 1169, 1280, 1298 |
| HgaI | GACGC | 8 cut(s) | 80, 176, 416, 1024, 1067, 1168, 1737, 1889 |
| HhaI | GCGC | 8 cut(s) | 607, 739, 1085, 1135, 1168, 1262, 1279, 1297 |
| Hin1I | GRCGYC | 4 cut(s) | 9, 1277, 1748, 1881 |
| Hin1II | CATG | 8 cut(s) | 239, 589, 933, 1114, 1733, 1826, 1960, 2023 |
| Hin6I | GCGC | 8 cut(s) | 605, 737, 1083, 1133, 1166, 1260, 1277, 1295 |
| HinP1I | GCGC | 8 cut(s) | 605, 737, 1083, 1133, 1166, 1260, 1277, 1295 |
| HincII | GTYRAC | 5 cut(s) | 346, 382, 1374, 1436, 1671 |
| HindII | GTYRAC | 5 cut(s) | 346, 382, 1374, 1436, 1671 |
| HindIII | AAGCTT | 1 cut(s) | 450 |
| HphI | GGTGA | 6 cut(s) | 430, 1238, 1342, 1465, 1613, 1613 |
| Hpy188I | TCNGA | 4 cut(s) | 46, 865, 881, 1180 |
| Hpy188III | TCNNGA | 7 cut(s) | 39, 191, 556, 751, 908, 1446, 1730 |
| Hpy99I | CGWCG | 6 cut(s) | 439, 729, 850, 1375, 1378, 1718 |
| HpyAV | CCTTC | 8 cut(s) | 632, 799, 1279, 1427, 1592, 1702, 1810, 2081 |
| HpyCH4III | ACNGT | 3 cut(s) | 439, 649, 1243 |
| HpyCH4IV | ACGT | 6 cut(s) | 9, 684, 848, 1533, 1713, 1899 |
| HpyCH4V | TGCA | 6 cut(s) | 107, 148, 182, 235, 484, 795 |
| HpyF3I | CTNAG | 8 cut(s) | 719, 758, 1169, 1494, 1778, 1986, 2049, 2100 |
| HpySE526I | ACGT | 6 cut(s) | 9, 684, 848, 1533, 1713, 1899 |
| Hsp92I | GRCGYC | 4 cut(s) | 9, 1277, 1748, 1881 |
| Hsp92II | CATG | 8 cut(s) | 239, 589, 933, 1114, 1733, 1826, 1960, 2023 |
| HspAI | GCGC | 8 cut(s) | 605, 737, 1083, 1133, 1166, 1260, 1277, 1295 |
| KasI | GGCGCC | 1 cut(s) | 1276 |
| Kpn2I | TCCGGA | 2 cut(s) | 38, 190 |
| KpnI | GGTACC | 1 cut(s) | 1319 |
| KroI | GCCGGC | 1 cut(s) | 1297 |
| KroNI | GCCGGC | 1 cut(s) | 1299 |
| KspI | CCGCGG | 2 cut(s) | 480, 1283 |
| Kzo9I | GATC | 9 cut(s) | 41, 537, 558, 747, 1078, 1972, 2004, 2035, 2067 |
| LguI | GCTCTTC | 1 cut(s) | 234 |
| LmnI | GCTCC | 9 cut(s) | 734, 841, 991, 1292, 1366, 1528, 1774, 1921, 1948 |
| Lsp1109I | GCAGC | 9 cut(s) | 129, 132, 208, 411, 981, 1378, 1659, 1953, 2016 |
| LweI | GCATC | 3 cut(s) | 191, 1838, 1861 |
| MaeI | CTAG | 5 cut(s) | 131, 201, 248, 1103, 2009 |
| MaeII | ACGT | 6 cut(s) | 9, 684, 848, 1533, 1713, 1899 |
| MaeIII | GTNAC | 5 cut(s) | 508, 1055, 1226, 1348, 1471 |
| MalI | GATC | 9 cut(s) | 43, 539, 560, 749, 1080, 1974, 2006, 2037, 2069 |
| MbiI | CCGCTC | 6 cut(s) | 884, 1557, 1633, 1771, 1912, 1933 |
| MboI | GATC | 9 cut(s) | 41, 537, 558, 747, 1078, 1972, 2004, 2035, 2067 |
| MboII | GAAGA | 8 cut(s) | 251, 403, 926, 1333, 1466, 1472, 2005, 2068 |
| MflI | RGATCY | 4 cut(s) | 41, 537, 2004, 2067 |
| MhlI | GDGCHC | 8 cut(s) | 246, 486, 528, 581, 1175, 1483, 1713, 1779 |
| MluCI | AATT | 2 cut(s) | 73, 855 |
| MluI | ACGCGT | 1 cut(s) | 1016 |
| Mly113I | GGCGCC | 1 cut(s) | 1277 |
| MlyI | GAGTC | 8 cut(s) | 77, 320, 758, 898, 1024, 1436, 1559, 2090 |
| MmeI | TCCRAC | 3 cut(s) | 843, 1344, 1381 |
| MreI | CGCCGGCG | 1 cut(s) | 1297 |
| MroI | TCCGGA | 2 cut(s) | 38, 190 |
| MroNI | GCCGGC | 1 cut(s) | 1297 |
| MseI | TTAA | 2 cut(s) | 455, 858 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1221 |
| MspR9I | CCNGG | 8 cut(s) | 542, 985, 1123, 1311, 1312, 1477, 1742, 1763 |
| MvaI | CCWGG | 3 cut(s) | 542, 1742, 1763 |
| MvnI | CGCG | 9 cut(s) | 62, 187, 479, 501, 924, 1018, 1083, 1262, 1282 |
| NaeI | GCCGGC | 1 cut(s) | 1299 |
| NarI | GGCGCC | 1 cut(s) | 1277 |
| NciI | CCSGG | 5 cut(s) | 985, 1123, 1311, 1312, 1477 |
| NdeII | GATC | 9 cut(s) | 41, 537, 558, 747, 1078, 1972, 2004, 2035, 2067 |
| NgoMIV | GCCGGC | 1 cut(s) | 1297 |
| NlaIII | CATG | 8 cut(s) | 239, 589, 933, 1114, 1733, 1826, 1960, 2023 |
| NmeAIII | GCCGAG | 1 cut(s) | 1609 |
| NmuCI | GTSAC | 4 cut(s) | 508, 1055, 1226, 1471 |
| NspI | RCATGY | 4 cut(s) | 589, 933, 1960, 2023 |
| PagI | TCATGA | 1 cut(s) | 1729 |
| PceI | AGGCCT | 1 cut(s) | 215 |
| PciI | ACATGT | 3 cut(s) | 585, 1956, 2019 |
| PciSI | GCTCTTC | 1 cut(s) | 234 |
| PcsI | WCGNNNNNNNCGW | 3 cut(s) | 92, 184, 1382 |
| PdiI | GCCGGC | 1 cut(s) | 1299 |
| PfeI | GAWTC | 3 cut(s) | 35, 952, 1685 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 159, 588 |
| PleI | GAGTC | 8 cut(s) | 77, 319, 758, 898, 1024, 1436, 1559, 2089 |
| PluTI | GGCGCC | 1 cut(s) | 1280 |
| PpsI | GAGTC | 8 cut(s) | 77, 319, 758, 898, 1024, 1436, 1559, 2089 |
| Ppu21I | YACGTR | 1 cut(s) | 685 |
| PpuMI | RGGWCCY | 1 cut(s) | 641 |
| PscI | ACATGT | 3 cut(s) | 585, 1956, 2019 |
| PshAI | GACNNNNGTC | 2 cut(s) | 972, 1676 |
| Psp124BI | GAGCTC | 2 cut(s) | 1175, 1779 |
| Psp1406I | AACGTT | 1 cut(s) | 1899 |
| Psp5II | RGGWCCY | 1 cut(s) | 641 |
| Psp6I | CCWGG | 3 cut(s) | 540, 1740, 1761 |
| PspEI | GGTNACC | 1 cut(s) | 1471 |
| PspFI | CCCAGC | 2 cut(s) | 410, 1636 |
| PspGI | CCWGG | 3 cut(s) | 540, 1740, 1761 |
| PspOMI | GGGCCC | 1 cut(s) | 1479 |
| PspPI | GGNCC | 8 cut(s) | 469, 641, 1254, 1308, 1479, 1480, 1795, 1819 |
| PspPPI | RGGWCCY | 1 cut(s) | 641 |
| PstI | CTGCAG | 1 cut(s) | 150 |
| PstNI | CAGNNNCTG | 2 cut(s) | 541, 1513 |
| PsuI | RGATCY | 4 cut(s) | 41, 537, 2004, 2067 |
| RsaI | GTAC | 6 cut(s) | 683, 776, 896, 1317, 1408, 1552 |
| RsaNI | GTAC | 6 cut(s) | 682, 775, 895, 1316, 1407, 1551 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1221 |
| SacI | GAGCTC | 2 cut(s) | 1175, 1779 |
| SacII | CCGCGG | 2 cut(s) | 480, 1283 |
| SalI | GTCGAC | 2 cut(s) | 1372, 1669 |
| SapI | GCTCTTC | 1 cut(s) | 234 |
| SaqAI | TTAA | 2 cut(s) | 455, 858 |
| Sau3AI | GATC | 9 cut(s) | 41, 537, 558, 747, 1078, 1972, 2004, 2035, 2067 |
| Sau96I | GGNCC | 8 cut(s) | 469, 641, 1254, 1308, 1479, 1480, 1795, 1819 |
| SchI | GAGTC | 8 cut(s) | 77, 320, 758, 898, 1024, 1436, 1559, 2090 |
| ScrFI | CCNGG | 8 cut(s) | 542, 985, 1123, 1311, 1312, 1477, 1742, 1763 |
| SduI | GDGCHC | 8 cut(s) | 246, 486, 528, 581, 1175, 1483, 1713, 1779 |
| SfaNI | GCATC | 3 cut(s) | 191, 1838, 1861 |
| SfcI | CTRYAG | 5 cut(s) | 146, 533, 1034, 1539, 1799 |
| SfoI | GGCGCC | 1 cut(s) | 1278 |
| Sfr303I | CCGCGG | 2 cut(s) | 480, 1283 |
| SgrAI | CRCCGGYG | 1 cut(s) | 1297 |
| SgrBI | CCGCGG | 2 cut(s) | 480, 1283 |
| SgrDI | CGTCGACG | 1 cut(s) | 1372 |
| SinI | GGWCC | 2 cut(s) | 641, 1254 |
| SmaI | CCCGGG | 1 cut(s) | 1312 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1221 |
| Sse9I | AATT | 2 cut(s) | 73, 855 |
| SseBI | AGGCCT | 1 cut(s) | 215 |
| SspDI | GGCGCC | 1 cut(s) | 1276 |
| SspMI | CTAG | 5 cut(s) | 131, 201, 248, 1103, 2009 |
| SstI | GAGCTC | 2 cut(s) | 1175, 1779 |
| StuI | AGGCCT | 1 cut(s) | 215 |
| StyD4I | CCNGG | 8 cut(s) | 540, 983, 1121, 1309, 1310, 1475, 1740, 1761 |
| StyI | CCWWGG | 2 cut(s) | 694, 730 |
| TaaI | ACNGT | 3 cut(s) | 439, 649, 1243 |
| TaiI | ACGT | 6 cut(s) | 12, 687, 851, 1536, 1716, 1902 |
| TaqI | TCGA | 8 cut(s) | 23, 138, 327, 750, 1373, 1440, 1670, 1842 |
| TaqII | GACCGA | 1 cut(s) | 1656 |
| TasI | AATT | 2 cut(s) | 73, 855 |
| TfiI | GAWTC | 3 cut(s) | 35, 952, 1685 |
| Tru1I | TTAA | 2 cut(s) | 455, 858 |
| Tru9I | TTAA | 2 cut(s) | 455, 858 |
| TscAI | CASTG | 3 cut(s) | 34, 123, 283 |
| TseFI | GTSAC | 4 cut(s) | 508, 1055, 1226, 1471 |
| TseI | GCWGC | 9 cut(s) | 142, 145, 221, 424, 994, 1391, 1647, 1966, 2029 |
| Tsp45I | GTSAC | 4 cut(s) | 508, 1055, 1226, 1471 |
| TspDTI | ATGAA | 2 cut(s) | 252, 1718 |
| TspGWI | ACGGA | 4 cut(s) | 84, 147, 962, 1355 |
| TspMI | CCCGGG | 1 cut(s) | 1310 |
| TspRI | CASTG | 3 cut(s) | 34, 123, 283 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 159, 588 |
| VneI | GTGCAC | 1 cut(s) | 482 |
| VpaK11BI | GGWCC | 2 cut(s) | 641, 1254 |
| XapI | RAATTY | 1 cut(s) | 73 |
| XceI | RCATGY | 4 cut(s) | 589, 933, 1960, 2023 |
| XcmI | CCANNNNNNNNNTGG | 3 cut(s) | 1217, 1360, 1759 |
| XmaI | CCCGGG | 1 cut(s) | 1310 |
| XmiI | GTMKAC | 2 cut(s) | 1373, 1670 |
| XspI | CTAG | 5 cut(s) | 131, 201, 248, 1103, 2009 |
| ZraI | GACGTC | 1 cut(s) | 10 |