No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 325 |
| AccB1I | GGYRCC | 2 cut(s) | 869, 1014 |
| AccBSI | CCGCTC | 5 cut(s) | 451, 478, 616, 757, 769 |
| AccII | CGCG | 2 cut(s) | 237, 936 |
| AclWI | GGATC | 1 cut(s) | 12 |
| AcoI | YGGCCR | 1 cut(s) | 825 |
| AcuI | CTGAAG | 2 cut(s) | 523, 839 |
| AcvI | CACGTG | 1 cut(s) | 336 |
| AcyI | GRCGYC | 2 cut(s) | 593, 870 |
| AfaI | GTAC | 2 cut(s) | 397, 962 |
| AfeI | AGCGCT | 1 cut(s) | 922 |
| AflIII | ACRYGT | 1 cut(s) | 801 |
| AgsI | TTSAA | 2 cut(s) | 312, 848 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 320 |
| AjiI | CACGTC | 1 cut(s) | 559 |
| AjnI | CCWGG | 3 cut(s) | 405, 495, 585 |
| AluBI | AGCT | 2 cut(s) | 88, 622 |
| AluI | AGCT | 2 cut(s) | 88, 622 |
| Alw21I | GWGCWC | 1 cut(s) | 624 |
| Alw26I | GTCTC | 2 cut(s) | 26, 565 |
| AlwI | GGATC | 1 cut(s) | 12 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 358 |
| Ama87I | CYCGRG | 1 cut(s) | 362 |
| Aor51HI | AGCGCT | 1 cut(s) | 922 |
| AoxI | GGCC | 7 cut(s) | 493, 640, 663, 705, 741, 825, 879 |
| ApeKI | GCWGC | 7 cut(s) | 118, 121, 160, 811, 938, 941, 1001 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 852 |
| AspLEI | GCGC | 7 cut(s) | 61, 223, 237, 261, 872, 923, 938 |
| AspS9I | GGNCC | 5 cut(s) | 76, 180, 640, 664, 1009 |
| AsuHPI | GGTGA | 5 cut(s) | 164, 268, 458, 458, 914 |
| AvaI | CYCGRG | 1 cut(s) | 362 |
| AvaII | GGWCC | 3 cut(s) | 76, 180, 1009 |
| BaeGI | GKGCMC | 1 cut(s) | 558 |
| BanI | GGYRCC | 2 cut(s) | 869, 1014 |
| BanII | GRGCYC | 1 cut(s) | 624 |
| BauI | CACGAG | 1 cut(s) | 729 |
| BbrPI | CACGTG | 1 cut(s) | 336 |
| BbsI | GAAGAC | 1 cut(s) | 71 |
| Bbv12I | GWGCWC | 1 cut(s) | 624 |
| BbvCI | CCTCAGC | 1 cut(s) | 924 |
| BbvI | GCAGC | 7 cut(s) | 105, 108, 147, 798, 925, 928, 1013 |
| BccI | CCATC | 1 cut(s) | 49 |
| BceAI | ACGGC | 5 cut(s) | 248, 305, 561, 728, 935 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 698, 732 |
| BciT130I | CCWGG | 3 cut(s) | 407, 497, 587 |
| BcoDI | GTCTC | 2 cut(s) | 26, 565 |
| BfmI | CTRYAG | 1 cut(s) | 644 |
| BfoI | RGCGCY | 3 cut(s) | 224, 873, 924 |
| BfuAI | ACCTGC | 1 cut(s) | 325 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 878 |
| BlpI | GCTNAGC | 1 cut(s) | 95 |
| Bme1390I | CCNGG | 3 cut(s) | 407, 497, 587 |
| Bme18I | GGWCC | 3 cut(s) | 76, 180, 1009 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 320 |
| BmeT110I | CYCGRG | 1 cut(s) | 362 |
| BmgBI | CACGTC | 1 cut(s) | 559 |
| BmgT120I | GGNCC | 5 cut(s) | 76, 180, 640, 664, 1009 |
| BmiI | GGNNCC | 7 cut(s) | 111, 181, 294, 369, 871, 932, 1016 |
| BmrFI | CCNGG | 3 cut(s) | 407, 497, 587 |
| BmrI | ACTGGG | 1 cut(s) | 515 |
| BmsI | GCATC | 1 cut(s) | 706 |
| BmuI | ACTGGG | 1 cut(s) | 515 |
| BpiI | GAAGAC | 1 cut(s) | 71 |
| BpmI | CTGGAG | 2 cut(s) | 518, 917 |
| Bpu10I | CCTNAGC | 3 cut(s) | 623, 917, 924 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 95 |
| BsaAI | YACGTR | 1 cut(s) | 336 |
| BsaHI | GRCGYC | 2 cut(s) | 593, 870 |
| BsaI | GGTCTC | 1 cut(s) | 26 |
| BsaJI | CCNNGG | 6 cut(s) | 105, 363, 831, 882, 951, 1018 |
| BsaWI | WCCGGW | 3 cut(s) | 47, 182, 1011 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 23, 53 |
| Bse1I | ACTGG | 2 cut(s) | 100, 521 |
| Bse3DI | GCAATG | 1 cut(s) | 996 |
| BseBI | CCWGG | 3 cut(s) | 407, 497, 587 |
| BseDI | CCNNGG | 6 cut(s) | 105, 363, 831, 882, 951, 1018 |
| BseMI | GCAATG | 1 cut(s) | 996 |
| BseMII | CTCAG | 4 cut(s) | 86, 637, 908, 915 |
| BseNI | ACTGG | 2 cut(s) | 100, 521 |
| BseRI | GAGGAG | 2 cut(s) | 515, 644 |
| BseSI | GKGCMC | 1 cut(s) | 558 |
| BseXI | GCAGC | 7 cut(s) | 105, 108, 147, 798, 925, 928, 1013 |
| BseYI | CCCAGC | 1 cut(s) | 262 |
| BsgI | GTGCAG | 1 cut(s) | 263 |
| Bsh1236I | CGCG | 2 cut(s) | 237, 936 |
| BshFI | GGCC | 7 cut(s) | 495, 642, 665, 707, 743, 827, 881 |
| BshNI | GGYRCC | 2 cut(s) | 869, 1014 |
| BsiHKAI | GWGCWC | 1 cut(s) | 624 |
| BsiHKCI | CYCGRG | 1 cut(s) | 362 |
| BsiSI | CCGG | 3 cut(s) | 48, 183, 1012 |
| BslFI | GGGAC | 5 cut(s) | 193, 589, 665, 773, 790 |
| BsmAI | GTCTC | 2 cut(s) | 26, 565 |
| BsmBI | CGTCTC | 1 cut(s) | 565 |
| BsmFI | GGGAC | 5 cut(s) | 193, 589, 665, 773, 790 |
| BsnI | GGCC | 7 cut(s) | 495, 642, 665, 707, 743, 827, 881 |
| Bso31I | GGTCTC | 1 cut(s) | 26 |
| BsoBI | CYCGRG | 1 cut(s) | 362 |
| Bsp1286I | GDGCHC | 2 cut(s) | 558, 624 |
| Bsp143I | GATC | 2 cut(s) | 4, 15 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 95 |
| Bsp19I | CCATGG | 1 cut(s) | 1018 |
| BspANI | GGCC | 7 cut(s) | 495, 642, 665, 707, 743, 827, 881 |
| BspCNI | CTCAG | 4 cut(s) | 87, 636, 909, 916 |
| BspFNI | CGCG | 2 cut(s) | 237, 936 |
| BspLI | GGNNCC | 7 cut(s) | 111, 181, 294, 369, 871, 932, 1016 |
| BspMI | ACCTGC | 1 cut(s) | 325 |
| BspPI | GGATC | 1 cut(s) | 12 |
| BspT107I | GGYRCC | 2 cut(s) | 869, 1014 |
| BspTNI | GGTCTC | 1 cut(s) | 26 |
| BsrBI | CCGCTC | 5 cut(s) | 451, 478, 616, 757, 769 |
| BsrDI | GCAATG | 1 cut(s) | 996 |
| BsrI | ACTGG | 2 cut(s) | 100, 521 |
| BssECI | CCNNGG | 6 cut(s) | 105, 363, 831, 882, 951, 1018 |
| BssMI | GATC | 2 cut(s) | 4, 15 |
| BssNI | GRCGYC | 2 cut(s) | 593, 870 |
| BssSI | CACGAG | 1 cut(s) | 729 |
| BssT1I | CCWWGG | 2 cut(s) | 831, 1018 |
| Bst2BI | CACGAG | 1 cut(s) | 729 |
| Bst2UI | CCWGG | 3 cut(s) | 407, 497, 587 |
| Bst4CI | ACNGT | 5 cut(s) | 70, 446, 603, 713, 780 |
| BstACI | GRCGYC | 2 cut(s) | 593, 870 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 358 |
| BstBAI | YACGTR | 1 cut(s) | 336 |
| BstC8I | GCNNGC | 7 cut(s) | 165, 193, 225, 354, 476, 640, 913 |
| BstDEI | CTNAG | 5 cut(s) | 95, 623, 763, 917, 924 |
| BstDSI | CCRYGG | 2 cut(s) | 951, 1018 |
| BstFNI | CGCG | 2 cut(s) | 237, 936 |
| BstH2I | RGCGCY | 3 cut(s) | 224, 873, 924 |
| BstHHI | GCGC | 7 cut(s) | 61, 223, 237, 261, 872, 923, 938 |
| BstKTI | GATC | 2 cut(s) | 7, 18 |
| BstMAI | GTCTC | 2 cut(s) | 26, 565 |
| BstMBI | GATC | 2 cut(s) | 4, 15 |
| BstNI | CCWGG | 3 cut(s) | 407, 497, 587 |
| BstNSI | RCATGY | 1 cut(s) | 805 |
| BstSCI | CCNGG | 3 cut(s) | 405, 495, 585 |
| BstSFI | CTRYAG | 1 cut(s) | 644 |
| BstSLI | GKGCMC | 1 cut(s) | 558 |
| BstUI | CGCG | 2 cut(s) | 237, 936 |
| BstV1I | GCAGC | 7 cut(s) | 105, 108, 147, 798, 925, 928, 1013 |
| BstV2I | GAAGAC | 1 cut(s) | 71 |
| BsuRI | GGCC | 7 cut(s) | 495, 642, 665, 707, 743, 827, 881 |
| BtgI | CCRYGG | 2 cut(s) | 951, 1018 |
| BtrI | CACGTC | 1 cut(s) | 559 |
| BtsI | GCAGTG | 2 cut(s) | 203, 254 |
| BtsIMutI | CAGTG | 3 cut(s) | 75, 203, 254 |
| BveI | ACCTGC | 1 cut(s) | 325 |
| Cac8I | GCNNGC | 7 cut(s) | 165, 193, 225, 354, 476, 640, 913 |
| CaiI | CAGNNNCTG | 1 cut(s) | 358 |
| CfoI | GCGC | 7 cut(s) | 61, 223, 237, 261, 872, 923, 938 |
| Cfr13I | GGNCC | 5 cut(s) | 76, 180, 640, 664, 1009 |
| CseI | GACGC | 3 cut(s) | 582, 702, 734 |
| Csp6I | GTAC | 2 cut(s) | 396, 961 |
| CviAII | CATG | 4 cut(s) | 37, 575, 802, 1019 |
| CviQI | GTAC | 2 cut(s) | 396, 961 |
| DdeI | CTNAG | 5 cut(s) | 95, 623, 763, 917, 924 |
| DinI | GGCGCC | 1 cut(s) | 871 |
| DpnI | GATC | 2 cut(s) | 6, 17 |
| DpnII | GATC | 2 cut(s) | 4, 15 |
| DriI | GACNNNNNGTC | 1 cut(s) | 320 |
| EaeI | YGGCCR | 1 cut(s) | 825 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 320 |
| Ecl136II | GAGCTC | 1 cut(s) | 622 |
| Eco130I | CCWWGG | 2 cut(s) | 831, 1018 |
| Eco24I | GRGCYC | 1 cut(s) | 624 |
| Eco31I | GGTCTC | 1 cut(s) | 26 |
| Eco47I | GGWCC | 3 cut(s) | 76, 180, 1009 |
| Eco47III | AGCGCT | 1 cut(s) | 922 |
| Eco53kI | GAGCTC | 1 cut(s) | 622 |
| Eco57I | CTGAAG | 2 cut(s) | 523, 839 |
| Eco72I | CACGTG | 1 cut(s) | 336 |
| Eco88I | CYCGRG | 1 cut(s) | 362 |
| EcoICRI | GAGCTC | 1 cut(s) | 622 |
| EcoRII | CCWGG | 3 cut(s) | 405, 495, 585 |
| EcoT14I | CCWWGG | 2 cut(s) | 831, 1018 |
| EcoT38I | GRGCYC | 1 cut(s) | 624 |
| EgeI | GGCGCC | 1 cut(s) | 871 |
| EheI | GGCGCC | 1 cut(s) | 871 |
| ErhI | CCWWGG | 2 cut(s) | 831, 1018 |
| Esp3I | CGTCTC | 1 cut(s) | 565 |
| FaeI | CATG | 4 cut(s) | 40, 578, 805, 1022 |
| FaiI | YATR | 9 cut(s) | 38, 42, 230, 281, 437, 576, 803, 821, 1020 |
| FaqI | GGGAC | 5 cut(s) | 193, 589, 665, 773, 790 |
| FatI | CATG | 4 cut(s) | 36, 574, 801, 1018 |
| FriOI | GRGCYC | 1 cut(s) | 624 |
| GlaI | GCGC | 7 cut(s) | 60, 222, 236, 260, 871, 922, 937 |
| GsaI | CCCAGC | 1 cut(s) | 266 |
| GsuI | CTGGAG | 2 cut(s) | 518, 917 |
| HaeII | RGCGCY | 3 cut(s) | 224, 873, 924 |
| HaeIII | GGCC | 7 cut(s) | 495, 642, 665, 707, 743, 827, 881 |
| HapII | CCGG | 3 cut(s) | 48, 183, 1012 |
| HgaI | GACGC | 3 cut(s) | 582, 702, 734 |
| HhaI | GCGC | 7 cut(s) | 61, 223, 237, 261, 872, 923, 938 |
| Hin1I | GRCGYC | 2 cut(s) | 593, 870 |
| Hin1II | CATG | 4 cut(s) | 40, 578, 805, 1022 |
| Hin6I | GCGC | 7 cut(s) | 59, 221, 235, 259, 870, 921, 936 |
| HinP1I | GCGC | 7 cut(s) | 59, 221, 235, 259, 870, 921, 936 |
| HincII | GTYRAC | 1 cut(s) | 526 |
| HindII | GTYRAC | 1 cut(s) | 526 |
| HinfI | GANTC | 3 cut(s) | 410, 863, 956 |
| HpaI | GTTAAC | 1 cut(s) | 526 |
| HpaII | CCGG | 3 cut(s) | 48, 183, 1012 |
| HphI | GGTGA | 5 cut(s) | 164, 268, 458, 458, 914 |
| Hpy166II | GTNNAC | 2 cut(s) | 76, 526 |
| Hpy188I | TCNGA | 3 cut(s) | 54, 106, 513 |
| Hpy188III | TCNNGA | 2 cut(s) | 312, 597 |
| Hpy8I | GTNNAC | 2 cut(s) | 76, 526 |
| Hpy99I | CGWCG | 3 cut(s) | 304, 326, 696 |
| HpyAV | CCTTC | 7 cut(s) | 337, 547, 733, 835, 863, 979, 1000 |
| HpyCH4III | ACNGT | 5 cut(s) | 70, 446, 603, 713, 780 |
| HpyCH4IV | ACGT | 2 cut(s) | 335, 558 |
| HpyCH4V | TGCA | 2 cut(s) | 244, 574 |
| HpyF3I | CTNAG | 5 cut(s) | 95, 623, 763, 917, 924 |
| HpySE526I | ACGT | 2 cut(s) | 335, 558 |
| Hsp92I | GRCGYC | 2 cut(s) | 593, 870 |
| Hsp92II | CATG | 4 cut(s) | 40, 578, 805, 1022 |
| HspAI | GCGC | 7 cut(s) | 59, 221, 235, 259, 870, 921, 936 |
| KasI | GGCGCC | 1 cut(s) | 869 |
| KspAI | GTTAAC | 1 cut(s) | 526 |
| Kzo9I | GATC | 2 cut(s) | 4, 15 |
| LmnI | GCTCC | 5 cut(s) | 292, 373, 619, 793, 930 |
| Lsp1109I | GCAGC | 7 cut(s) | 105, 108, 147, 798, 925, 928, 1013 |
| LweI | GCATC | 1 cut(s) | 706 |
| MaeII | ACGT | 2 cut(s) | 335, 558 |
| MaeIII | GTNAC | 3 cut(s) | 152, 274, 401 |
| MalI | GATC | 2 cut(s) | 6, 17 |
| MbiI | CCGCTC | 5 cut(s) | 451, 478, 616, 757, 769 |
| MboI | GATC | 2 cut(s) | 4, 15 |
| MboII | GAAGA | 3 cut(s) | 76, 259, 352 |
| MhlI | GDGCHC | 2 cut(s) | 558, 624 |
| MluCI | AATT | 1 cut(s) | 22 |
| Mly113I | GGCGCC | 1 cut(s) | 870 |
| MlyI | GAGTC | 3 cut(s) | 404, 872, 965 |
| MmeI | TCCRAC | 3 cut(s) | 270, 547, 771 |
| MroXI | GAANNNNTTC | 1 cut(s) | 852 |
| MseI | TTAA | 1 cut(s) | 525 |
| MslI | CAYNNNNRTG | 1 cut(s) | 147 |
| MspA1I | CMGCKG | 2 cut(s) | 266, 859 |
| MspI | CCGG | 3 cut(s) | 48, 183, 1012 |
| MspR9I | CCNGG | 3 cut(s) | 407, 497, 587 |
| MvaI | CCWGG | 3 cut(s) | 407, 497, 587 |
| MvnI | CGCG | 2 cut(s) | 237, 936 |
| NarI | GGCGCC | 1 cut(s) | 870 |
| NcoI | CCATGG | 1 cut(s) | 1018 |
| NdeII | GATC | 2 cut(s) | 4, 15 |
| NlaIII | CATG | 4 cut(s) | 40, 578, 805, 1022 |
| NlaIV | GGNNCC | 7 cut(s) | 111, 181, 294, 369, 871, 932, 1016 |
| NmeAIII | GCCGAG | 3 cut(s) | 37, 454, 907 |
| NmuCI | GTSAC | 3 cut(s) | 152, 274, 401 |
| NspI | RCATGY | 1 cut(s) | 805 |
| PciI | ACATGT | 1 cut(s) | 801 |
| PdmI | GAANNNNTTC | 1 cut(s) | 852 |
| PleI | GAGTC | 3 cut(s) | 404, 871, 964 |
| PluTI | GGCGCC | 1 cut(s) | 873 |
| PmaCI | CACGTG | 1 cut(s) | 336 |
| PmlI | CACGTG | 1 cut(s) | 336 |
| PpsI | GAGTC | 3 cut(s) | 404, 871, 964 |
| Ppu21I | YACGTR | 1 cut(s) | 336 |
| PscI | ACATGT | 1 cut(s) | 801 |
| Psp124BI | GAGCTC | 1 cut(s) | 624 |
| Psp6I | CCWGG | 3 cut(s) | 405, 495, 585 |
| PspCI | CACGTG | 1 cut(s) | 336 |
| PspFI | CCCAGC | 1 cut(s) | 262 |
| PspGI | CCWGG | 3 cut(s) | 405, 495, 585 |
| PspN4I | GGNNCC | 7 cut(s) | 111, 181, 294, 369, 871, 932, 1016 |
| PspPI | GGNCC | 5 cut(s) | 76, 180, 640, 664, 1009 |
| PstNI | CAGNNNCTG | 1 cut(s) | 358 |
| RsaI | GTAC | 2 cut(s) | 397, 962 |
| RsaNI | GTAC | 2 cut(s) | 396, 961 |
| RseI | CAYNNNNRTG | 1 cut(s) | 147 |
| SacI | GAGCTC | 1 cut(s) | 624 |
| SaqAI | TTAA | 1 cut(s) | 525 |
| Sau3AI | GATC | 2 cut(s) | 4, 15 |
| Sau96I | GGNCC | 5 cut(s) | 76, 180, 640, 664, 1009 |
| SchI | GAGTC | 3 cut(s) | 404, 872, 965 |
| ScrFI | CCNGG | 3 cut(s) | 407, 497, 587 |
| SduI | GDGCHC | 2 cut(s) | 558, 624 |
| SfaNI | GCATC | 1 cut(s) | 706 |
| SfcI | CTRYAG | 1 cut(s) | 644 |
| SfoI | GGCGCC | 1 cut(s) | 871 |
| SinI | GGWCC | 3 cut(s) | 76, 180, 1009 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 147 |
| Sse9I | AATT | 1 cut(s) | 22 |
| SspDI | GGCGCC | 1 cut(s) | 869 |
| SstI | GAGCTC | 1 cut(s) | 624 |
| StyD4I | CCNGG | 3 cut(s) | 405, 495, 585 |
| StyI | CCWWGG | 2 cut(s) | 831, 1018 |
| TaaI | ACNGT | 5 cut(s) | 70, 446, 603, 713, 780 |
| TaiI | ACGT | 2 cut(s) | 338, 561 |
| TaqI | TCGA | 2 cut(s) | 18, 687 |
| TaqII | GACCGA | 2 cut(s) | 93, 1010 |
| TasI | AATT | 1 cut(s) | 22 |
| Tru1I | TTAA | 1 cut(s) | 525 |
| Tru9I | TTAA | 1 cut(s) | 525 |
| TscAI | CASTG | 3 cut(s) | 75, 210, 261 |
| TseFI | GTSAC | 3 cut(s) | 152, 274, 401 |
| TseI | GCWGC | 7 cut(s) | 118, 121, 160, 811, 938, 941, 1001 |
| Tsp45I | GTSAC | 3 cut(s) | 152, 274, 401 |
| TspDTI | ATGAA | 2 cut(s) | 452, 591 |
| TspGWI | ACGGA | 1 cut(s) | 553 |
| TspRI | CASTG | 3 cut(s) | 75, 210, 261 |
| VpaK11BI | GGWCC | 3 cut(s) | 76, 180, 1009 |
| XceI | RCATGY | 1 cut(s) | 805 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 143, 286 |
| XmnI | GAANNNNTTC | 1 cut(s) | 852 |