Putative gypsy type transposon
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 599 |
| Acc36I | ACCTGC | 1 cut(s) | 599 |
| AccB1I | GGYRCC | 3 cut(s) | 590, 733, 1327 |
| AccB7I | CCANNNNNTGG | 3 cut(s) | 414, 751, 798 |
| AccBSI | CCGCTC | 3 cut(s) | 1291, 1618, 1669 |
| AccI | GTMKAC | 2 cut(s) | 600, 903 |
| AccII | CGCG | 8 cut(s) | 317, 442, 492, 914, 916, 931, 1035, 1581 |
| AccIII | TCCGGA | 1 cut(s) | 445 |
| AclWI | GGATC | 3 cut(s) | 742, 948, 1260 |
| AcoI | YGGCCR | 5 cut(s) | 813, 1242, 1548, 1596, 1728 |
| AcsI | RAATTY | 2 cut(s) | 761, 820 |
| AcvI | CACGTG | 1 cut(s) | 230 |
| AcyI | GRCGYC | 1 cut(s) | 662 |
| AfeI | AGCGCT | 1 cut(s) | 500 |
| AflIII | ACRYGT | 3 cut(s) | 227, 229, 1627 |
| AgeI | ACCGGT | 1 cut(s) | 990 |
| AjiI | CACGTC | 1 cut(s) | 1630 |
| AjnI | CCWGG | 2 cut(s) | 293, 750 |
| AleI | CACNNNNGTG | 1 cut(s) | 1308 |
| AluBI | AGCT | 4 cut(s) | 453, 1471, 1588, 1772 |
| AluI | AGCT | 4 cut(s) | 453, 1471, 1588, 1772 |
| Alw21I | GWGCWC | 2 cut(s) | 455, 1473 |
| Alw26I | GTCTC | 8 cut(s) | 88, 107, 149, 168, 1130, 1496, 1516, 1636 |
| AlwI | GGATC | 3 cut(s) | 742, 948, 1260 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 751 |
| Ama87I | CYCGRG | 1 cut(s) | 1133 |
| Aor13HI | TCCGGA | 1 cut(s) | 445 |
| Aor51HI | AGCGCT | 1 cut(s) | 500 |
| ApeKI | GCWGC | 6 cut(s) | 473, 518, 629, 686, 1660, 1705 |
| ApoI | RAATTY | 2 cut(s) | 761, 820 |
| AsiGI | ACCGGT | 1 cut(s) | 990 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 870 |
| AspLEI | GCGC | 6 cut(s) | 317, 492, 501, 639, 916, 1147 |
| AspS9I | GGNCC | 6 cut(s) | 851, 1057, 1111, 1233, 1313, 1386 |
| AsuC2I | CCSGG | 3 cut(s) | 841, 1017, 1061 |
| AsuHPI | GGTGA | 5 cut(s) | 476, 1138, 1183, 1214, 1390 |
| AsuNHI | GCTAGC | 1 cut(s) | 521 |
| AvaI | CYCGRG | 1 cut(s) | 1133 |
| AvaII | GGWCC | 4 cut(s) | 1057, 1233, 1313, 1386 |
| BaeGI | GKGCMC | 1 cut(s) | 738 |
| BalI | TGGCCA | 3 cut(s) | 815, 1550, 1598 |
| BanI | GGYRCC | 3 cut(s) | 590, 733, 1327 |
| BanII | GRGCYC | 2 cut(s) | 455, 1473 |
| BauI | CACGAG | 1 cut(s) | 695 |
| BbrPI | CACGTG | 1 cut(s) | 230 |
| Bbv12I | GWGCWC | 2 cut(s) | 455, 1473 |
| BbvI | GCAGC | 6 cut(s) | 460, 505, 616, 673, 1647, 1717 |
| BccI | CCATC | 7 cut(s) | 250, 416, 581, 1048, 1202, 1607, 1720 |
| BceAI | ACGGC | 5 cut(s) | 581, 663, 674, 1257, 1446 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 580, 614 |
| BciT130I | CCWGG | 2 cut(s) | 295, 752 |
| BcnI | CCSGG | 3 cut(s) | 841, 1017, 1061 |
| BcoDI | GTCTC | 8 cut(s) | 88, 107, 149, 168, 1130, 1496, 1516, 1636 |
| BfaI | CTAG | 5 cut(s) | 386, 456, 522, 972, 1356 |
| BfmI | CTRYAG | 4 cut(s) | 240, 401, 1218, 1661 |
| BfoI | RGCGCY | 2 cut(s) | 502, 1148 |
| BfuAI | ACCTGC | 1 cut(s) | 599 |
| BlpI | GCTNAGC | 2 cut(s) | 148, 1148 |
| Bme1390I | CCNGG | 5 cut(s) | 295, 752, 841, 1017, 1061 |
| Bme18I | GGWCC | 4 cut(s) | 1057, 1233, 1313, 1386 |
| BmeT110I | CYCGRG | 1 cut(s) | 1133 |
| BmgBI | CACGTC | 1 cut(s) | 1630 |
| BmgT120I | GGNCC | 6 cut(s) | 851, 1057, 1111, 1233, 1313, 1386 |
| BmrFI | CCNGG | 5 cut(s) | 295, 752, 841, 1017, 1061 |
| BmsI | GCATC | 4 cut(s) | 1164, 1170, 1284, 1450 |
| BmtI | GCTAGC | 1 cut(s) | 525 |
| BpmI | CTGGAG | 2 cut(s) | 728, 1478 |
| Bpu10I | CCTNAGC | 2 cut(s) | 1472, 1680 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 148, 1148 |
| BpuMI | CCSGG | 3 cut(s) | 841, 1017, 1061 |
| BsaAI | YACGTR | 1 cut(s) | 230 |
| BsaHI | GRCGYC | 1 cut(s) | 662 |
| BsaI | GGTCTC | 1 cut(s) | 1496 |
| BsaJI | CCNNGG | 5 cut(s) | 712, 1098, 1158, 1551, 1579 |
| BsaWI | WCCGGW | 3 cut(s) | 445, 990, 1165 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 85, 115, 146, 176, 1076, 1106 |
| Bse118I | RCCGGY | 3 cut(s) | 990, 1244, 1333 |
| Bse1I | ACTGG | 4 cut(s) | 1153, 1189, 1370, 1530 |
| BseAI | TCCGGA | 1 cut(s) | 445 |
| BseBI | CCWGG | 2 cut(s) | 295, 752 |
| BseDI | CCNNGG | 5 cut(s) | 712, 1098, 1158, 1551, 1579 |
| BseGI | GGATG | 8 cut(s) | 261, 408, 624, 658, 1213, 1299, 1575, 1731 |
| BseMII | CTCAG | 5 cut(s) | 162, 291, 597, 1139, 1486 |
| BseNI | ACTGG | 4 cut(s) | 1153, 1189, 1370, 1530 |
| BseRI | GAGGAG | 1 cut(s) | 1376 |
| BseSI | GKGCMC | 1 cut(s) | 738 |
| BseX3I | CGGCCG | 1 cut(s) | 1242 |
| BseXI | GCAGC | 6 cut(s) | 460, 505, 616, 673, 1647, 1717 |
| BseYI | CCCAGC | 6 cut(s) | 87, 533, 673, 1113, 1274, 1744 |
| BsgI | GTGCAG | 2 cut(s) | 1244, 1724 |
| Bsh1236I | CGCG | 8 cut(s) | 317, 442, 492, 914, 916, 931, 1035, 1581 |
| Bsh1285I | CGRYCG | 1 cut(s) | 1245 |
| BshNI | GGYRCC | 3 cut(s) | 590, 733, 1327 |
| BshTI | ACCGGT | 1 cut(s) | 990 |
| BsiEI | CGRYCG | 1 cut(s) | 1245 |
| BsiHKAI | GWGCWC | 2 cut(s) | 455, 1473 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1133 |
| BsiSI | CCGG | 8 cut(s) | 446, 840, 991, 1016, 1060, 1166, 1245, 1334 |
| BslFI | GGGAC | 4 cut(s) | 196, 907, 1246, 1622 |
| BsmAI | GTCTC | 8 cut(s) | 88, 107, 149, 168, 1130, 1496, 1516, 1636 |
| BsmBI | CGTCTC | 4 cut(s) | 107, 168, 1130, 1636 |
| BsmFI | GGGAC | 4 cut(s) | 196, 907, 1246, 1622 |
| BsmI | GAATGC | 1 cut(s) | 565 |
| Bso31I | GGTCTC | 1 cut(s) | 1496 |
| BsoBI | CYCGRG | 1 cut(s) | 1133 |
| Bsp1286I | GDGCHC | 3 cut(s) | 455, 738, 1473 |
| Bsp13I | TCCGGA | 1 cut(s) | 445 |
| Bsp143I | GATC | 4 cut(s) | 747, 940, 1252, 1650 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 148, 1148 |
| Bsp68I | TCGCGA | 1 cut(s) | 1035 |
| BspCNI | CTCAG | 5 cut(s) | 161, 292, 596, 1140, 1485 |
| BspEI | TCCGGA | 1 cut(s) | 445 |
| BspFNI | CGCG | 8 cut(s) | 317, 442, 492, 914, 916, 931, 1035, 1581 |
| BspMAI | CTGCAG | 1 cut(s) | 1665 |
| BspMI | ACCTGC | 1 cut(s) | 599 |
| BspOI | GCTAGC | 1 cut(s) | 525 |
| BspPI | GGATC | 3 cut(s) | 742, 948, 1260 |
| BspT107I | GGYRCC | 3 cut(s) | 590, 733, 1327 |
| BspTNI | GGTCTC | 1 cut(s) | 1496 |
| BsrBI | CCGCTC | 3 cut(s) | 1291, 1618, 1669 |
| BsrFI | RCCGGY | 3 cut(s) | 990, 1244, 1333 |
| BsrI | ACTGG | 4 cut(s) | 1153, 1189, 1370, 1530 |
| BssAI | RCCGGY | 3 cut(s) | 990, 1244, 1333 |
| BssECI | CCNNGG | 5 cut(s) | 712, 1098, 1158, 1551, 1579 |
| BssMI | GATC | 4 cut(s) | 747, 940, 1252, 1650 |
| BssNAI | GTATAC | 1 cut(s) | 904 |
| BssNI | GRCGYC | 1 cut(s) | 662 |
| BssSI | CACGAG | 1 cut(s) | 695 |
| BssT1I | CCWWGG | 2 cut(s) | 712, 1551 |
| Bst1107I | GTATAC | 1 cut(s) | 904 |
| Bst2BI | CACGAG | 1 cut(s) | 695 |
| Bst2UI | CCWGG | 2 cut(s) | 295, 752 |
| Bst4CI | ACNGT | 4 cut(s) | 219, 859, 1123, 1222 |
| Bst6I | CTCTTC | 3 cut(s) | 534, 916, 1446 |
| BstACI | GRCGYC | 1 cut(s) | 662 |
| BstBAI | YACGTR | 1 cut(s) | 230 |
| BstDEI | CTNAG | 6 cut(s) | 148, 300, 583, 1148, 1472, 1680 |
| BstDSI | CCRYGG | 1 cut(s) | 1579 |
| BstEII | GGTNACC | 1 cut(s) | 1756 |
| BstF5I | GGATG | 8 cut(s) | 261, 408, 624, 658, 1213, 1299, 1575, 1731 |
| BstFNI | CGCG | 8 cut(s) | 317, 442, 492, 914, 916, 931, 1035, 1581 |
| BstH2I | RGCGCY | 2 cut(s) | 502, 1148 |
| BstHHI | GCGC | 6 cut(s) | 317, 492, 501, 639, 916, 1147 |
| BstKTI | GATC | 4 cut(s) | 750, 943, 1255, 1653 |
| BstMAI | GTCTC | 8 cut(s) | 88, 107, 149, 168, 1130, 1496, 1516, 1636 |
| BstMBI | GATC | 4 cut(s) | 747, 940, 1252, 1650 |
| BstMCI | CGRYCG | 1 cut(s) | 1245 |
| BstNI | CCWGG | 2 cut(s) | 295, 752 |
| BstPI | GGTNACC | 1 cut(s) | 1756 |
| BstSCI | CCNGG | 5 cut(s) | 293, 750, 839, 1015, 1059 |
| BstSFI | CTRYAG | 4 cut(s) | 240, 401, 1218, 1661 |
| BstSLI | GKGCMC | 1 cut(s) | 738 |
| BstUI | CGCG | 8 cut(s) | 317, 442, 492, 914, 916, 931, 1035, 1581 |
| BstV1I | GCAGC | 6 cut(s) | 460, 505, 616, 673, 1647, 1717 |
| BstX2I | RGATCY | 1 cut(s) | 747 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1310 |
| BstYI | RGATCY | 1 cut(s) | 747 |
| BstZ17I | GTATAC | 1 cut(s) | 904 |
| BstZI | CGGCCG | 1 cut(s) | 1242 |
| BtgI | CCRYGG | 1 cut(s) | 1579 |
| BtgZI | GCGATG | 1 cut(s) | 1067 |
| BtrI | CACGTC | 1 cut(s) | 1630 |
| BtsCI | GGATG | 8 cut(s) | 261, 408, 624, 658, 1213, 1299, 1575, 1731 |
| BtsI | GCAGTG | 3 cut(s) | 289, 371, 1655 |
| BtsIMutI | CAGTG | 5 cut(s) | 289, 371, 1227, 1377, 1655 |
| BtuMI | TCGCGA | 1 cut(s) | 1035 |
| BveI | ACCTGC | 1 cut(s) | 599 |
| CaiI | CAGNNNCTG | 1 cut(s) | 751 |
| CfoI | GCGC | 6 cut(s) | 317, 492, 501, 639, 916, 1147 |
| Cfr10I | RCCGGY | 3 cut(s) | 990, 1244, 1333 |
| Cfr13I | GGNCC | 6 cut(s) | 851, 1057, 1111, 1233, 1313, 1386 |
| Cfr42I | CCGCGG | 1 cut(s) | 1582 |
| CseI | GACGC | 5 cut(s) | 335, 431, 651, 920, 1046 |
| CspAI | ACCGGT | 1 cut(s) | 990 |
| CviAII | CATG | 3 cut(s) | 359, 817, 1090 |
| DdeI | CTNAG | 6 cut(s) | 148, 300, 583, 1148, 1472, 1680 |
| DpnI | GATC | 4 cut(s) | 749, 942, 1254, 1652 |
| DpnII | GATC | 4 cut(s) | 747, 940, 1252, 1650 |
| EaeI | YGGCCR | 5 cut(s) | 813, 1242, 1548, 1596, 1728 |
| EagI | CGGCCG | 1 cut(s) | 1242 |
| Eam1104I | CTCTTC | 3 cut(s) | 534, 916, 1446 |
| EarI | CTCTTC | 3 cut(s) | 534, 916, 1446 |
| Ecl136II | GAGCTC | 2 cut(s) | 453, 1471 |
| EclXI | CGGCCG | 1 cut(s) | 1242 |
| Eco130I | CCWWGG | 2 cut(s) | 712, 1551 |
| Eco24I | GRGCYC | 2 cut(s) | 455, 1473 |
| Eco31I | GGTCTC | 1 cut(s) | 1496 |
| Eco47I | GGWCC | 4 cut(s) | 1057, 1233, 1313, 1386 |
| Eco47III | AGCGCT | 1 cut(s) | 500 |
| Eco52I | CGGCCG | 1 cut(s) | 1242 |
| Eco53kI | GAGCTC | 2 cut(s) | 453, 1471 |
| Eco72I | CACGTG | 1 cut(s) | 230 |
| Eco88I | CYCGRG | 1 cut(s) | 1133 |
| Eco91I | GGTNACC | 1 cut(s) | 1756 |
| EcoICRI | GAGCTC | 2 cut(s) | 453, 1471 |
| EcoO109I | RGGNCCY | 2 cut(s) | 851, 1233 |
| EcoO65I | GGTNACC | 1 cut(s) | 1756 |
| EcoRI | GAATTC | 1 cut(s) | 820 |
| EcoRII | CCWGG | 2 cut(s) | 293, 750 |
| EcoT14I | CCWWGG | 2 cut(s) | 712, 1551 |
| EcoT38I | GRGCYC | 2 cut(s) | 455, 1473 |
| ErhI | CCWWGG | 2 cut(s) | 712, 1551 |
| Esp3I | CGTCTC | 4 cut(s) | 107, 168, 1130, 1636 |
| FaeI | CATG | 3 cut(s) | 362, 820, 1093 |
| FaqI | GGGAC | 4 cut(s) | 196, 907, 1246, 1622 |
| FatI | CATG | 3 cut(s) | 358, 816, 1089 |
| FblI | GTMKAC | 2 cut(s) | 600, 903 |
| FokI | GGATG | 8 cut(s) | 268, 395, 631, 665, 1220, 1306, 1562, 1738 |
| FriOI | GRGCYC | 2 cut(s) | 455, 1473 |
| FspBI | CTAG | 5 cut(s) | 386, 456, 522, 972, 1356 |
| GlaI | GCGC | 6 cut(s) | 316, 491, 500, 638, 915, 1146 |
| GsaI | CCCAGC | 6 cut(s) | 91, 537, 677, 1117, 1278, 1748 |
| GsuI | CTGGAG | 2 cut(s) | 728, 1478 |
| HaeII | RGCGCY | 2 cut(s) | 502, 1148 |
| HapII | CCGG | 8 cut(s) | 446, 840, 991, 1016, 1060, 1166, 1245, 1334 |
| HgaI | GACGC | 5 cut(s) | 335, 431, 651, 920, 1046 |
| HhaI | GCGC | 6 cut(s) | 317, 492, 501, 639, 916, 1147 |
| Hin1I | GRCGYC | 1 cut(s) | 662 |
| Hin1II | CATG | 3 cut(s) | 362, 820, 1093 |
| Hin6I | GCGC | 6 cut(s) | 315, 490, 499, 637, 914, 1145 |
| HinP1I | GCGC | 6 cut(s) | 315, 490, 499, 637, 914, 1145 |
| HincII | GTYRAC | 2 cut(s) | 225, 601 |
| HindII | GTYRAC | 2 cut(s) | 225, 601 |
| HinfI | GANTC | 7 cut(s) | 290, 338, 566, 667, 1030, 1436, 1712 |
| HpaI | GTTAAC | 1 cut(s) | 225 |
| HpaII | CCGG | 8 cut(s) | 446, 840, 991, 1016, 1060, 1166, 1245, 1334 |
| HphI | GGTGA | 5 cut(s) | 476, 1138, 1183, 1214, 1390 |
| Hpy166II | GTNNAC | 5 cut(s) | 225, 601, 694, 904, 1129 |
| Hpy188I | TCNGA | 8 cut(s) | 301, 586, 783, 945, 981, 1159, 1257, 1487 |
| Hpy188III | TCNNGA | 8 cut(s) | 179, 446, 695, 745, 892, 1034, 1442, 1495 |
| Hpy8I | GTNNAC | 5 cut(s) | 225, 601, 694, 904, 1129 |
| Hpy99I | CGWCG | 5 cut(s) | 497, 602, 605, 667, 1040 |
| HpyAV | CCTTC | 3 cut(s) | 652, 1042, 1279 |
| HpyCH4III | ACNGT | 4 cut(s) | 219, 859, 1123, 1222 |
| HpyCH4IV | ACGT | 4 cut(s) | 229, 264, 1139, 1629 |
| HpyCH4V | TGCA | 5 cut(s) | 48, 362, 1225, 1663, 1705 |
| HpyF3I | CTNAG | 6 cut(s) | 148, 300, 583, 1148, 1472, 1680 |
| HpySE526I | ACGT | 4 cut(s) | 229, 264, 1139, 1629 |
| Hsp92I | GRCGYC | 1 cut(s) | 662 |
| Hsp92II | CATG | 3 cut(s) | 362, 820, 1093 |
| HspAI | GCGC | 6 cut(s) | 315, 490, 499, 637, 914, 1145 |
| KflI | GGGWCCC | 1 cut(s) | 1233 |
| Kpn2I | TCCGGA | 1 cut(s) | 445 |
| KspAI | GTTAAC | 1 cut(s) | 225 |
| KspI | CCGCGG | 1 cut(s) | 1582 |
| Kzo9I | GATC | 4 cut(s) | 747, 940, 1252, 1650 |
| LmnI | GCTCC | 6 cut(s) | 533, 1288, 1363, 1615, 1642, 1666 |
| Lsp1109I | GCAGC | 6 cut(s) | 460, 505, 616, 673, 1647, 1717 |
| LweI | GCATC | 4 cut(s) | 1164, 1170, 1284, 1450 |
| MaeI | CTAG | 5 cut(s) | 386, 456, 522, 972, 1356 |
| MaeII | ACGT | 4 cut(s) | 229, 264, 1139, 1629 |
| MaeIII | GTNAC | 5 cut(s) | 421, 1351, 1378, 1562, 1756 |
| MalI | GATC | 4 cut(s) | 749, 942, 1254, 1652 |
| MbiI | CCGCTC | 3 cut(s) | 1291, 1618, 1669 |
| MboI | GATC | 4 cut(s) | 747, 940, 1252, 1650 |
| MboII | GAAGA | 7 cut(s) | 299, 551, 568, 930, 933, 1463, 1490 |
| MflI | RGATCY | 1 cut(s) | 747 |
| MhlI | GDGCHC | 3 cut(s) | 455, 738, 1473 |
| MlsI | TGGCCA | 3 cut(s) | 815, 1550, 1598 |
| MluCI | AATT | 3 cut(s) | 761, 820, 1075 |
| MluNI | TGGCCA | 3 cut(s) | 815, 1550, 1598 |
| MlyI | GAGTC | 2 cut(s) | 1039, 1721 |
| MmeI | TCCRAC | 2 cut(s) | 1004, 1620 |
| Mox20I | TGGCCA | 3 cut(s) | 815, 1550, 1598 |
| MroI | TCCGGA | 1 cut(s) | 445 |
| MroXI | GAANNNNTTC | 1 cut(s) | 870 |
| MscI | TGGCCA | 3 cut(s) | 815, 1550, 1598 |
| MseI | TTAA | 2 cut(s) | 224, 1774 |
| MslI | CAYNNNNRTG | 3 cut(s) | 879, 1308, 1700 |
| Msp20I | TGGCCA | 3 cut(s) | 815, 1550, 1598 |
| MspI | CCGG | 8 cut(s) | 446, 840, 991, 1016, 1060, 1166, 1245, 1334 |
| MspR9I | CCNGG | 5 cut(s) | 295, 752, 841, 1017, 1061 |
| Mva1269I | GAATGC | 1 cut(s) | 565 |
| MvaI | CCWGG | 2 cut(s) | 295, 752 |
| MvnI | CGCG | 8 cut(s) | 317, 442, 492, 914, 916, 931, 1035, 1581 |
| NciI | CCSGG | 3 cut(s) | 841, 1017, 1061 |
| NdeII | GATC | 4 cut(s) | 747, 940, 1252, 1650 |
| NheI | GCTAGC | 1 cut(s) | 521 |
| NlaIII | CATG | 3 cut(s) | 362, 820, 1093 |
| NmeAIII | GCCGAG | 1 cut(s) | 1123 |
| NmuCI | GTSAC | 3 cut(s) | 1351, 1378, 1562 |
| NruI | TCGCGA | 1 cut(s) | 1035 |
| OliI | CACNNNNGTG | 1 cut(s) | 1308 |
| PaqCI | CACCTGC | 1 cut(s) | 599 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 347, 439 |
| PctI | GAATGC | 1 cut(s) | 565 |
| PdmI | GAANNNNTTC | 1 cut(s) | 870 |
| PfeI | GAWTC | 5 cut(s) | 290, 338, 566, 667, 1436 |
| PflFI | GACNNNGTC | 3 cut(s) | 99, 160, 1343 |
| PflMI | CCANNNNNTGG | 3 cut(s) | 414, 751, 798 |
| PinAI | ACCGGT | 1 cut(s) | 990 |
| PleI | GAGTC | 2 cut(s) | 1038, 1720 |
| PmaCI | CACGTG | 1 cut(s) | 230 |
| PmlI | CACGTG | 1 cut(s) | 230 |
| PpsI | GAGTC | 2 cut(s) | 1038, 1720 |
| Ppu21I | YACGTR | 1 cut(s) | 230 |
| PpuMI | RGGWCCY | 1 cut(s) | 1233 |
| Psp124BI | GAGCTC | 2 cut(s) | 455, 1473 |
| Psp5II | RGGWCCY | 1 cut(s) | 1233 |
| Psp6I | CCWGG | 2 cut(s) | 293, 750 |
| PspCI | CACGTG | 1 cut(s) | 230 |
| PspEI | GGTNACC | 1 cut(s) | 1756 |
| PspFI | CCCAGC | 6 cut(s) | 87, 533, 673, 1113, 1274, 1744 |
| PspGI | CCWGG | 2 cut(s) | 293, 750 |
| PspPI | GGNCC | 6 cut(s) | 851, 1057, 1111, 1233, 1313, 1386 |
| PspPPI | RGGWCCY | 1 cut(s) | 1233 |
| PstI | CTGCAG | 1 cut(s) | 1665 |
| PstNI | CAGNNNCTG | 1 cut(s) | 751 |
| PsuI | RGATCY | 1 cut(s) | 747 |
| PsyI | GACNNNGTC | 3 cut(s) | 99, 160, 1343 |
| RruI | TCGCGA | 1 cut(s) | 1035 |
| RseI | CAYNNNNRTG | 3 cut(s) | 879, 1308, 1700 |
| SacI | GAGCTC | 2 cut(s) | 455, 1473 |
| SacII | CCGCGG | 1 cut(s) | 1582 |
| SalI | GTCGAC | 1 cut(s) | 599 |
| SaqAI | TTAA | 2 cut(s) | 224, 1774 |
| Sau3AI | GATC | 4 cut(s) | 747, 940, 1252, 1650 |
| Sau96I | GGNCC | 6 cut(s) | 851, 1057, 1111, 1233, 1313, 1386 |
| SchI | GAGTC | 2 cut(s) | 1039, 1721 |
| ScrFI | CCNGG | 5 cut(s) | 295, 752, 841, 1017, 1061 |
| SduI | GDGCHC | 3 cut(s) | 455, 738, 1473 |
| SfaNI | GCATC | 4 cut(s) | 1164, 1170, 1284, 1450 |
| SfcI | CTRYAG | 4 cut(s) | 240, 401, 1218, 1661 |
| Sfr303I | CCGCGG | 1 cut(s) | 1582 |
| SgrAI | CRCCGGYG | 1 cut(s) | 1333 |
| SgrBI | CCGCGG | 1 cut(s) | 1582 |
| SgrDI | CGTCGACG | 1 cut(s) | 599 |
| SinI | GGWCC | 4 cut(s) | 1057, 1233, 1313, 1386 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 879, 1308, 1700 |
| SmlI | CTYRAG | 1 cut(s) | 1765 |
| SmoI | CTYRAG | 1 cut(s) | 1765 |
| Sse9I | AATT | 3 cut(s) | 761, 820, 1075 |
| SspMI | CTAG | 5 cut(s) | 386, 456, 522, 972, 1356 |
| SstI | GAGCTC | 2 cut(s) | 455, 1473 |
| StyD4I | CCNGG | 5 cut(s) | 293, 750, 839, 1015, 1059 |
| StyI | CCWWGG | 2 cut(s) | 712, 1551 |
| TaaI | ACNGT | 4 cut(s) | 219, 859, 1123, 1222 |
| TaiI | ACGT | 4 cut(s) | 232, 267, 1142, 1632 |
| TaqI | TCGA | 7 cut(s) | 178, 234, 278, 600, 665, 1028, 1536 |
| TasI | AATT | 3 cut(s) | 761, 820, 1075 |
| TfiI | GAWTC | 5 cut(s) | 290, 338, 566, 667, 1436 |
| Tru1I | TTAA | 2 cut(s) | 224, 1774 |
| Tru9I | TTAA | 2 cut(s) | 224, 1774 |
| TscAI | CASTG | 5 cut(s) | 289, 378, 1227, 1377, 1662 |
| TseFI | GTSAC | 3 cut(s) | 1351, 1378, 1562 |
| TseI | GCWGC | 6 cut(s) | 473, 518, 629, 686, 1660, 1705 |
| Tsp45I | GTSAC | 3 cut(s) | 1351, 1378, 1562 |
| TspDTI | ATGAA | 4 cut(s) | 17, 833, 1638, 1751 |
| TspGWI | ACGGA | 2 cut(s) | 177, 339 |
| TspRI | CASTG | 5 cut(s) | 289, 378, 1227, 1377, 1662 |
| Tth111I | GACNNNGTC | 3 cut(s) | 99, 160, 1343 |
| Van91I | CCANNNNNTGG | 3 cut(s) | 414, 751, 798 |
| VpaK11BI | GGWCC | 4 cut(s) | 1057, 1233, 1313, 1386 |
| XapI | RAATTY | 2 cut(s) | 761, 820 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 1196, 1244 |
| XmiI | GTMKAC | 2 cut(s) | 600, 903 |
| XmnI | GAANNNNTTC | 1 cut(s) | 870 |
| XspI | CTAG | 5 cut(s) | 386, 456, 522, 972, 1356 |