No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 14 |
| AarI | CACCTGC | 1 cut(s) | 355 |
| Acc36I | ACCTGC | 1 cut(s) | 355 |
| Acc65I | GGTACC | 1 cut(s) | 1400 |
| AccB1I | GGYRCC | 2 cut(s) | 828, 1400 |
| AccBSI | CCGCTC | 5 cut(s) | 205, 613, 751, 904, 1302 |
| AccI | GTMKAC | 1 cut(s) | 424 |
| AccII | CGCG | 7 cut(s) | 557, 1311, 1313, 1392, 1394, 1499, 1501 |
| AclWI | GGATC | 2 cut(s) | 960, 979 |
| AcoI | YGGCCR | 2 cut(s) | 1137, 1380 |
| AcsI | RAATTY | 2 cut(s) | 245, 566 |
| AcuI | CTGAAG | 4 cut(s) | 395, 968, 974, 1293 |
| AcyI | GRCGYC | 3 cut(s) | 1149, 1334, 1412 |
| AfaI | GTAC | 6 cut(s) | 44, 139, 354, 408, 560, 1402 |
| AfiI | CCNNNNNNNGG | 8 cut(s) | 586, 838, 891, 994, 1034, 1075, 1250, 1478 |
| AflIII | ACRYGT | 1 cut(s) | 261 |
| AgsI | TTSAA | 3 cut(s) | 269, 1099, 1174 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 916 |
| AjnI | CCWGG | 4 cut(s) | 155, 498, 540, 1452 |
| AleI | CACNNNNGTG | 1 cut(s) | 606 |
| Alw21I | GWGCWC | 1 cut(s) | 1243 |
| Alw26I | GTCTC | 5 cut(s) | 376, 446, 782, 924, 1363 |
| AlwI | GGATC | 2 cut(s) | 960, 979 |
| Ama87I | CYCGRG | 2 cut(s) | 167, 899 |
| AoxI | GGCC | 7 cut(s) | 302, 462, 703, 840, 1077, 1137, 1380 |
| ApeKI | GCWGC | 6 cut(s) | 437, 472, 512, 754, 1024, 1465 |
| ApoI | RAATTY | 2 cut(s) | 245, 566 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 143, 175 |
| AseI | ATTAAT | 1 cut(s) | 218 |
| Asp718I | GGTACC | 1 cut(s) | 1400 |
| AspLEI | GCGC | 5 cut(s) | 648, 1187, 1313, 1394, 1501 |
| AspS9I | GGNCC | 3 cut(s) | 302, 462, 895 |
| AsuC2I | CCSGG | 2 cut(s) | 192, 742 |
| AsuHPI | GGTGA | 8 cut(s) | 244, 376, 514, 593, 1307, 1316, 1420, 1493 |
| AvaI | CYCGRG | 2 cut(s) | 167, 899 |
| AvaII | GGWCC | 1 cut(s) | 895 |
| BaeI | ACNNNNGTAYC | 4 cut(s) | 121, 154, 1392, 1425 |
| BanI | GGYRCC | 2 cut(s) | 828, 1400 |
| BanII | GRGCYC | 1 cut(s) | 1243 |
| BbsI | GAAGAC | 1 cut(s) | 17 |
| Bbv12I | GWGCWC | 1 cut(s) | 1243 |
| BbvCI | CCTCAGC | 1 cut(s) | 306 |
| BbvI | GCAGC | 6 cut(s) | 424, 484, 499, 766, 1036, 1477 |
| BccI | CCATC | 5 cut(s) | 893, 1123, 1391, 1468, 1472 |
| BceAI | ACGGC | 5 cut(s) | 61, 282, 655, 1012, 1207 |
| BciT130I | CCWGG | 4 cut(s) | 157, 500, 542, 1454 |
| BclI | TGATCA | 1 cut(s) | 661 |
| BcnI | CCSGG | 2 cut(s) | 192, 742 |
| BcoDI | GTCTC | 5 cut(s) | 376, 446, 782, 924, 1363 |
| BfaI | CTAG | 2 cut(s) | 375, 791 |
| BfoI | RGCGCY | 1 cut(s) | 1188 |
| BfuAI | ACCTGC | 1 cut(s) | 355 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 1228 |
| BlpI | GCTNAGC | 2 cut(s) | 679, 1218 |
| Bme1390I | CCNGG | 6 cut(s) | 157, 192, 500, 542, 742, 1454 |
| Bme18I | GGWCC | 1 cut(s) | 895 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 916 |
| BmeT110I | CYCGRG | 2 cut(s) | 167, 899 |
| BmgT120I | GGNCC | 3 cut(s) | 302, 462, 895 |
| BmiI | GGNNCC | 8 cut(s) | 336, 463, 492, 830, 896, 1067, 1260, 1402 |
| BmrFI | CCNGG | 6 cut(s) | 157, 192, 500, 542, 742, 1454 |
| BmrI | ACTGGG | 1 cut(s) | 1204 |
| BmsI | GCATC | 5 cut(s) | 424, 436, 700, 737, 850 |
| BmuI | ACTGGG | 1 cut(s) | 1204 |
| BpiI | GAAGAC | 1 cut(s) | 17 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 1067, 1099, 1225, 1257 |
| BpmI | CTGGAG | 4 cut(s) | 139, 191, 764, 947 |
| Bpu10I | CCTNAGC | 3 cut(s) | 306, 758, 1285 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 679, 1218 |
| BpuEI | CTTGAG | 2 cut(s) | 653, 1251 |
| BpuMI | CCSGG | 2 cut(s) | 192, 742 |
| BsaHI | GRCGYC | 3 cut(s) | 1149, 1334, 1412 |
| BsaI | GGTCTC | 2 cut(s) | 376, 446 |
| BsaJI | CCNNGG | 9 cut(s) | 298, 498, 740, 837, 1014, 1086, 1140, 1245, 1404 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1230, 1260 |
| Bsc4I | CCNNNNNNNGG | 8 cut(s) | 586, 838, 891, 994, 1034, 1075, 1250, 1478 |
| Bse118I | RCCGGY | 1 cut(s) | 389 |
| Bse1I | ACTGG | 5 cut(s) | 208, 930, 963, 1210, 1436 |
| Bse3DI | GCAATG | 2 cut(s) | 28, 100 |
| BseBI | CCWGG | 4 cut(s) | 157, 500, 542, 1454 |
| BseDI | CCNNGG | 9 cut(s) | 298, 498, 740, 837, 1014, 1086, 1140, 1245, 1404 |
| BseGI | GGATG | 4 cut(s) | 1150, 1324, 1402, 1483 |
| BseLI | CCNNNNNNNGG | 8 cut(s) | 586, 838, 891, 994, 1034, 1075, 1250, 1478 |
| BseMI | GCAATG | 2 cut(s) | 28, 100 |
| BseMII | CTCAG | 4 cut(s) | 320, 738, 1209, 1365 |
| BseNI | ACTGG | 5 cut(s) | 208, 930, 963, 1210, 1436 |
| BseRI | GAGGAG | 3 cut(s) | 226, 779, 1078 |
| BseXI | GCAGC | 6 cut(s) | 424, 484, 499, 766, 1036, 1477 |
| BseYI | CCCAGC | 1 cut(s) | 1047 |
| BsgI | GTGCAG | 3 cut(s) | 548, 1043, 1386 |
| Bsh1236I | CGCG | 7 cut(s) | 557, 1311, 1313, 1392, 1394, 1499, 1501 |
| BshFI | GGCC | 7 cut(s) | 304, 464, 705, 842, 1079, 1139, 1382 |
| BshNI | GGYRCC | 2 cut(s) | 828, 1400 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1243 |
| BsiHKCI | CYCGRG | 2 cut(s) | 167, 899 |
| BsiSI | CCGG | 3 cut(s) | 192, 390, 742 |
| BslFI | GGGAC | 3 cut(s) | 326, 908, 1192 |
| BslI | CCNNNNNNNGG | 8 cut(s) | 586, 838, 891, 994, 1034, 1075, 1250, 1478 |
| BsmAI | GTCTC | 5 cut(s) | 376, 446, 782, 924, 1363 |
| BsmFI | GGGAC | 3 cut(s) | 326, 908, 1192 |
| BsnI | GGCC | 7 cut(s) | 304, 464, 705, 842, 1079, 1139, 1382 |
| Bso31I | GGTCTC | 2 cut(s) | 376, 446 |
| BsoBI | CYCGRG | 2 cut(s) | 167, 899 |
| Bsp1286I | GDGCHC | 1 cut(s) | 1243 |
| Bsp143I | GATC | 5 cut(s) | 628, 661, 952, 984, 1306 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 679, 1218 |
| Bsp19I | CCATGG | 2 cut(s) | 1086, 1404 |
| BspANI | GGCC | 7 cut(s) | 304, 464, 705, 842, 1079, 1139, 1382 |
| BspCNI | CTCAG | 4 cut(s) | 319, 739, 1210, 1364 |
| BspFNI | CGCG | 7 cut(s) | 557, 1311, 1313, 1392, 1394, 1499, 1501 |
| BspLI | GGNNCC | 8 cut(s) | 336, 463, 492, 830, 896, 1067, 1260, 1402 |
| BspMI | ACCTGC | 1 cut(s) | 355 |
| BspPI | GGATC | 2 cut(s) | 960, 979 |
| BspT107I | GGYRCC | 2 cut(s) | 828, 1400 |
| BspTNI | GGTCTC | 2 cut(s) | 376, 446 |
| BsrBI | CCGCTC | 5 cut(s) | 205, 613, 751, 904, 1302 |
| BsrDI | GCAATG | 2 cut(s) | 28, 100 |
| BsrFI | RCCGGY | 1 cut(s) | 389 |
| BsrI | ACTGG | 5 cut(s) | 208, 930, 963, 1210, 1436 |
| BssAI | RCCGGY | 1 cut(s) | 389 |
| BssECI | CCNNGG | 9 cut(s) | 298, 498, 740, 837, 1014, 1086, 1140, 1245, 1404 |
| BssMI | GATC | 5 cut(s) | 628, 661, 952, 984, 1306 |
| BssNI | GRCGYC | 3 cut(s) | 1149, 1334, 1412 |
| BssT1I | CCWWGG | 4 cut(s) | 837, 1086, 1140, 1404 |
| Bst2UI | CCWGG | 4 cut(s) | 157, 500, 542, 1454 |
| Bst4CI | ACNGT | 4 cut(s) | 147, 346, 508, 1170 |
| BstACI | GRCGYC | 3 cut(s) | 1149, 1334, 1412 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 54 |
| BstDEI | CTNAG | 7 cut(s) | 306, 679, 747, 758, 1218, 1285, 1351 |
| BstDSI | CCRYGG | 4 cut(s) | 298, 1086, 1245, 1404 |
| BstENI | CCTNNNNNAGG | 3 cut(s) | 836, 992, 1073 |
| BstF5I | GGATG | 4 cut(s) | 1150, 1324, 1402, 1483 |
| BstFNI | CGCG | 7 cut(s) | 557, 1311, 1313, 1392, 1394, 1499, 1501 |
| BstH2I | RGCGCY | 1 cut(s) | 1188 |
| BstHHI | GCGC | 5 cut(s) | 648, 1187, 1313, 1394, 1501 |
| BstKTI | GATC | 5 cut(s) | 631, 664, 955, 987, 1309 |
| BstMAI | GTCTC | 5 cut(s) | 376, 446, 782, 924, 1363 |
| BstMBI | GATC | 5 cut(s) | 628, 661, 952, 984, 1306 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 54, 78, 90, 446, 488, 1228, 1308 |
| BstNI | CCWGG | 4 cut(s) | 157, 500, 542, 1454 |
| BstNSI | RCATGY | 2 cut(s) | 265, 383 |
| BstSCI | CCNGG | 6 cut(s) | 155, 190, 498, 540, 740, 1452 |
| BstUI | CGCG | 7 cut(s) | 557, 1311, 1313, 1392, 1394, 1499, 1501 |
| BstV1I | GCAGC | 6 cut(s) | 424, 484, 499, 766, 1036, 1477 |
| BstV2I | GAAGAC | 1 cut(s) | 17 |
| BstX2I | RGATCY | 1 cut(s) | 984 |
| BstYI | RGATCY | 1 cut(s) | 984 |
| BsuRI | GGCC | 7 cut(s) | 304, 464, 705, 842, 1079, 1139, 1382 |
| BtgI | CCRYGG | 4 cut(s) | 298, 1086, 1245, 1404 |
| BtgZI | GCGATG | 2 cut(s) | 871, 1139 |
| BtsCI | GGATG | 4 cut(s) | 1150, 1324, 1402, 1483 |
| BtsIMutI | CAGTG | 1 cut(s) | 1429 |
| BveI | ACCTGC | 1 cut(s) | 355 |
| CfoI | GCGC | 5 cut(s) | 648, 1187, 1313, 1394, 1501 |
| Cfr10I | RCCGGY | 1 cut(s) | 389 |
| Cfr13I | GGNCC | 3 cut(s) | 302, 462, 895 |
| CseI | GACGC | 4 cut(s) | 410, 1157, 1342, 1420 |
| Csp6I | GTAC | 6 cut(s) | 43, 138, 353, 407, 559, 1401 |
| CviAII | CATG | 7 cut(s) | 262, 380, 710, 914, 1087, 1405, 1512 |
| CviQI | GTAC | 6 cut(s) | 43, 138, 353, 407, 559, 1401 |
| DdeI | CTNAG | 7 cut(s) | 306, 679, 747, 758, 1218, 1285, 1351 |
| DpnI | GATC | 5 cut(s) | 630, 663, 954, 986, 1308 |
| DpnII | GATC | 5 cut(s) | 628, 661, 952, 984, 1306 |
| DriI | GACNNNNNGTC | 1 cut(s) | 916 |
| EaeI | YGGCCR | 2 cut(s) | 1137, 1380 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 916 |
| EciI | GGCGGA | 3 cut(s) | 341, 830, 1331 |
| Ecl136II | GAGCTC | 1 cut(s) | 1241 |
| Eco130I | CCWWGG | 4 cut(s) | 837, 1086, 1140, 1404 |
| Eco24I | GRGCYC | 1 cut(s) | 1243 |
| Eco31I | GGTCTC | 2 cut(s) | 376, 446 |
| Eco47I | GGWCC | 1 cut(s) | 895 |
| Eco53kI | GAGCTC | 1 cut(s) | 1241 |
| Eco57I | CTGAAG | 4 cut(s) | 395, 968, 974, 1293 |
| Eco88I | CYCGRG | 2 cut(s) | 167, 899 |
| EcoICRI | GAGCTC | 1 cut(s) | 1241 |
| EcoNI | CCTNNNNNAGG | 3 cut(s) | 836, 992, 1073 |
| EcoO109I | RGGNCCY | 1 cut(s) | 895 |
| EcoRI | GAATTC | 1 cut(s) | 566 |
| EcoRII | CCWGG | 4 cut(s) | 155, 498, 540, 1452 |
| EcoT14I | CCWWGG | 4 cut(s) | 837, 1086, 1140, 1404 |
| EcoT38I | GRGCYC | 1 cut(s) | 1243 |
| ErhI | CCWWGG | 4 cut(s) | 837, 1086, 1140, 1404 |
| FaeI | CATG | 7 cut(s) | 265, 383, 713, 917, 1090, 1408, 1515 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 393, 425 |
| FaqI | GGGAC | 3 cut(s) | 326, 908, 1192 |
| FatI | CATG | 7 cut(s) | 261, 379, 709, 913, 1086, 1404, 1511 |
| FauI | CCCGC | 5 cut(s) | 13, 210, 303, 1044, 1397 |
| FbaI | TGATCA | 1 cut(s) | 661 |
| FblI | GTMKAC | 1 cut(s) | 424 |
| FokI | GGATG | 4 cut(s) | 1157, 1331, 1409, 1490 |
| FriOI | GRGCYC | 1 cut(s) | 1243 |
| FspBI | CTAG | 2 cut(s) | 375, 791 |
| GlaI | GCGC | 5 cut(s) | 647, 1186, 1312, 1393, 1500 |
| GsaI | CCCAGC | 1 cut(s) | 1051 |
| GsuI | CTGGAG | 4 cut(s) | 139, 191, 764, 947 |
| HaeII | RGCGCY | 1 cut(s) | 1188 |
| HaeIII | GGCC | 7 cut(s) | 304, 464, 705, 842, 1079, 1139, 1382 |
| HapII | CCGG | 3 cut(s) | 192, 390, 742 |
| HgaI | GACGC | 4 cut(s) | 410, 1157, 1342, 1420 |
| HhaI | GCGC | 5 cut(s) | 648, 1187, 1313, 1394, 1501 |
| Hin1I | GRCGYC | 3 cut(s) | 1149, 1334, 1412 |
| Hin1II | CATG | 7 cut(s) | 265, 383, 713, 917, 1090, 1408, 1515 |
| Hin6I | GCGC | 5 cut(s) | 646, 1185, 1311, 1392, 1499 |
| HinP1I | GCGC | 5 cut(s) | 646, 1185, 1311, 1392, 1499 |
| HincII | GTYRAC | 2 cut(s) | 162, 425 |
| HindII | GTYRAC | 2 cut(s) | 162, 425 |
| HindIII | AAGCTT | 1 cut(s) | 175 |
| HinfI | GANTC | 2 cut(s) | 545, 998 |
| HpaII | CCGG | 3 cut(s) | 192, 390, 742 |
| HphI | GGTGA | 8 cut(s) | 244, 376, 514, 593, 1307, 1316, 1420, 1493 |
| Hpy166II | GTNNAC | 3 cut(s) | 76, 162, 425 |
| Hpy188I | TCNGA | 4 cut(s) | 565, 1018, 1354, 1438 |
| Hpy188III | TCNNGA | 6 cut(s) | 181, 571, 632, 781, 973, 1163 |
| Hpy8I | GTNNAC | 3 cut(s) | 76, 162, 425 |
| Hpy99I | CGWCG | 3 cut(s) | 147, 426, 854 |
| HpyAV | CCTTC | 5 cut(s) | 694, 943, 998, 1174, 1268 |
| HpyCH4III | ACNGT | 4 cut(s) | 147, 346, 508, 1170 |
| HpyCH4IV | ACGT | 2 cut(s) | 819, 852 |
| HpyCH4V | TGCA | 5 cut(s) | 529, 709, 1024, 1330, 1367 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 54, 78, 90, 446, 488, 1228, 1308 |
| HpyF3I | CTNAG | 7 cut(s) | 306, 679, 747, 758, 1218, 1285, 1351 |
| HpySE526I | ACGT | 2 cut(s) | 819, 852 |
| Hsp92I | GRCGYC | 3 cut(s) | 1149, 1334, 1412 |
| Hsp92II | CATG | 7 cut(s) | 265, 383, 713, 917, 1090, 1408, 1515 |
| HspAI | GCGC | 5 cut(s) | 646, 1185, 1311, 1392, 1499 |
| KpnI | GGTACC | 1 cut(s) | 1404 |
| Ksp22I | TGATCA | 1 cut(s) | 661 |
| Kzo9I | GATC | 5 cut(s) | 628, 661, 952, 984, 1306 |
| LmnI | GCTCC | 8 cut(s) | 204, 210, 496, 787, 928, 1065, 1238, 1246 |
| Lsp1109I | GCAGC | 6 cut(s) | 424, 484, 499, 766, 1036, 1477 |
| LweI | GCATC | 5 cut(s) | 424, 436, 700, 737, 850 |
| MaeI | CTAG | 2 cut(s) | 375, 791 |
| MaeII | ACGT | 2 cut(s) | 819, 852 |
| MaeIII | GTNAC | 4 cut(s) | 382, 502, 1408, 1502 |
| MalI | GATC | 5 cut(s) | 630, 663, 954, 986, 1308 |
| MbiI | CCGCTC | 5 cut(s) | 205, 613, 751, 904, 1302 |
| MboI | GATC | 5 cut(s) | 628, 661, 952, 984, 1306 |
| MboII | GAAGA | 4 cut(s) | 17, 1051, 1067, 1496 |
| MflI | RGATCY | 1 cut(s) | 984 |
| MhlI | GDGCHC | 1 cut(s) | 1243 |
| MluCI | AATT | 5 cut(s) | 52, 219, 245, 566, 978 |
| MlyI | GAGTC | 1 cut(s) | 539 |
| MmeI | TCCRAC | 2 cut(s) | 282, 1011 |
| MseI | TTAA | 2 cut(s) | 87, 218 |
| MslI | CAYNNNNRTG | 1 cut(s) | 606 |
| MspA1I | CMGCKG | 3 cut(s) | 310, 415, 1051 |
| MspI | CCGG | 3 cut(s) | 192, 390, 742 |
| MspR9I | CCNGG | 6 cut(s) | 157, 192, 500, 542, 742, 1454 |
| MvaI | CCWGG | 4 cut(s) | 157, 500, 542, 1454 |
| MvnI | CGCG | 7 cut(s) | 557, 1311, 1313, 1392, 1394, 1499, 1501 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 54, 78, 90, 446, 488, 1228, 1308 |
| NciI | CCSGG | 2 cut(s) | 192, 742 |
| NcoI | CCATGG | 2 cut(s) | 1086, 1404 |
| NdeII | GATC | 5 cut(s) | 628, 661, 952, 984, 1306 |
| NlaIII | CATG | 7 cut(s) | 265, 383, 713, 917, 1090, 1408, 1515 |
| NlaIV | GGNNCC | 8 cut(s) | 336, 463, 492, 830, 896, 1067, 1260, 1402 |
| NmuCI | GTSAC | 3 cut(s) | 382, 502, 1408 |
| NspI | RCATGY | 2 cut(s) | 265, 383 |
| OliI | CACNNNNGTG | 1 cut(s) | 606 |
| PaeR7I | CTCGAG | 2 cut(s) | 167, 899 |
| PaqCI | CACCTGC | 1 cut(s) | 355 |
| PciI | ACATGT | 1 cut(s) | 261 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 554 |
| PfeI | GAWTC | 1 cut(s) | 998 |
| PleI | GAGTC | 1 cut(s) | 539 |
| PpsI | GAGTC | 1 cut(s) | 539 |
| PpuMI | RGGWCCY | 1 cut(s) | 895 |
| PscI | ACATGT | 1 cut(s) | 261 |
| PshBI | ATTAAT | 1 cut(s) | 218 |
| PsiI | TTATAA | 1 cut(s) | 14 |
| Psp124BI | GAGCTC | 1 cut(s) | 1243 |
| Psp5II | RGGWCCY | 1 cut(s) | 895 |
| Psp6I | CCWGG | 4 cut(s) | 155, 498, 540, 1452 |
| PspFI | CCCAGC | 1 cut(s) | 1047 |
| PspGI | CCWGG | 4 cut(s) | 155, 498, 540, 1452 |
| PspN4I | GGNNCC | 8 cut(s) | 336, 463, 492, 830, 896, 1067, 1260, 1402 |
| PspPI | GGNCC | 3 cut(s) | 302, 462, 895 |
| PspPPI | RGGWCCY | 1 cut(s) | 895 |
| PspXI | VCTCGAGB | 2 cut(s) | 167, 899 |
| PsuI | RGATCY | 1 cut(s) | 984 |
| RsaI | GTAC | 6 cut(s) | 44, 139, 354, 408, 560, 1402 |
| RsaNI | GTAC | 6 cut(s) | 43, 138, 353, 407, 559, 1401 |
| RseI | CAYNNNNRTG | 1 cut(s) | 606 |
| SacI | GAGCTC | 1 cut(s) | 1243 |
| SalI | GTCGAC | 1 cut(s) | 423 |
| SaqAI | TTAA | 2 cut(s) | 87, 218 |
| Sau3AI | GATC | 5 cut(s) | 628, 661, 952, 984, 1306 |
| Sau96I | GGNCC | 3 cut(s) | 302, 462, 895 |
| SchI | GAGTC | 1 cut(s) | 539 |
| ScrFI | CCNGG | 6 cut(s) | 157, 192, 500, 542, 742, 1454 |
| SduI | GDGCHC | 1 cut(s) | 1243 |
| SfaNI | GCATC | 5 cut(s) | 424, 436, 700, 737, 850 |
| Sfr274I | CTCGAG | 2 cut(s) | 167, 899 |
| SgrAI | CRCCGGYG | 1 cut(s) | 389 |
| SinI | GGWCC | 1 cut(s) | 895 |
| SlaI | CTCGAG | 2 cut(s) | 167, 899 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 606 |
| SmlI | CTYRAG | 4 cut(s) | 167, 632, 899, 1266 |
| SmoI | CTYRAG | 4 cut(s) | 167, 632, 899, 1266 |
| Sse9I | AATT | 5 cut(s) | 52, 219, 245, 566, 978 |
| SspMI | CTAG | 2 cut(s) | 375, 791 |
| SstI | GAGCTC | 1 cut(s) | 1243 |
| StyD4I | CCNGG | 6 cut(s) | 155, 190, 498, 540, 740, 1452 |
| StyI | CCWWGG | 4 cut(s) | 837, 1086, 1140, 1404 |
| TaaI | ACNGT | 4 cut(s) | 147, 346, 508, 1170 |
| TaiI | ACGT | 2 cut(s) | 822, 855 |
| TaqI | TCGA | 7 cut(s) | 129, 168, 182, 424, 650, 731, 900 |
| TasI | AATT | 5 cut(s) | 52, 219, 245, 566, 978 |
| TfiI | GAWTC | 1 cut(s) | 998 |
| Tru1I | TTAA | 2 cut(s) | 87, 218 |
| Tru9I | TTAA | 2 cut(s) | 87, 218 |
| TscAI | CASTG | 1 cut(s) | 1436 |
| TseFI | GTSAC | 3 cut(s) | 382, 502, 1408 |
| TseI | GCWGC | 6 cut(s) | 437, 472, 512, 754, 1024, 1465 |
| Tsp45I | GTSAC | 3 cut(s) | 382, 502, 1408 |
| TspDTI | ATGAA | 3 cut(s) | 17, 17, 120 |
| TspGWI | ACGGA | 1 cut(s) | 257 |
| TspRI | CASTG | 1 cut(s) | 1436 |
| VpaK11BI | GGWCC | 1 cut(s) | 895 |
| VspI | ATTAAT | 1 cut(s) | 218 |
| XagI | CCTNNNNNAGG | 3 cut(s) | 836, 992, 1073 |
| XapI | RAATTY | 2 cut(s) | 245, 566 |
| XceI | RCATGY | 2 cut(s) | 265, 383 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 808, 1159 |
| XhoI | CTCGAG | 2 cut(s) | 167, 899 |
| XmiI | GTMKAC | 1 cut(s) | 424 |
| XspI | CTAG | 2 cut(s) | 375, 791 |