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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 536 |
| Acc36I | ACCTGC | 1 cut(s) | 391 |
| AccB1I | GGYRCC | 5 cut(s) | 352, 823, 934, 1829, 1940 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1875 |
| AccBSI | CCGCTC | 3 cut(s) | 1432, 1585, 2109 |
| AccI | GTMKAC | 2 cut(s) | 1791, 1895 |
| AccII | CGCG | 9 cut(s) | 16, 330, 725, 920, 940, 1069, 1146, 1752, 2086 |
| AclWI | GGATC | 3 cut(s) | 280, 669, 1328 |
| AcoI | YGGCCR | 4 cut(s) | 957, 1557, 1641, 1758 |
| AcuI | CTGAAG | 5 cut(s) | 239, 347, 1061, 1339, 1655 |
| AcyI | GRCGYC | 3 cut(s) | 824, 935, 1090 |
| AfaI | GTAC | 4 cut(s) | 442, 500, 1213, 1778 |
| AfeI | AGCGCT | 2 cut(s) | 74, 1738 |
| AflIII | ACRYGT | 3 cut(s) | 414, 594, 1617 |
| AgsI | TTSAA | 5 cut(s) | 568, 686, 1044, 1664, 1937 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 2073 |
| AjiI | CACGTC | 1 cut(s) | 1375 |
| AjnI | CCWGG | 5 cut(s) | 1221, 1311, 1482, 1924, 2031 |
| AleI | CACNNNNGTG | 1 cut(s) | 1070 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1257, 1289 |
| AluBI | AGCT | 5 cut(s) | 253, 892, 1438, 1555, 1573 |
| AluI | AGCT | 5 cut(s) | 253, 892, 1438, 1555, 1573 |
| Alw21I | GWGCWC | 2 cut(s) | 13, 315 |
| Alw26I | GTCTC | 4 cut(s) | 588, 638, 809, 2060 |
| Alw44I | GTGCAC | 2 cut(s) | 9, 311 |
| AlwI | GGATC | 3 cut(s) | 280, 669, 1328 |
| Ama87I | CYCGRG | 2 cut(s) | 1178, 2046 |
| Aor51HI | AGCGCT | 2 cut(s) | 74, 1738 |
| ApaLI | GTGCAC | 2 cut(s) | 9, 311 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1075, 1107 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1668 |
| AspLEI | GCGC | 8 cut(s) | 75, 826, 920, 937, 993, 1739, 1754, 2086 |
| AspS9I | GGNCC | 9 cut(s) | 298, 423, 510, 736, 912, 1456, 1480, 2038, 2091 |
| AsuC2I | CCSGG | 6 cut(s) | 240, 995, 1729, 1976, 2047, 2048 |
| AsuHPI | GGTGA | 6 cut(s) | 259, 896, 934, 1000, 1274, 1730 |
| AvaI | CYCGRG | 2 cut(s) | 1178, 2046 |
| AvaII | GGWCC | 6 cut(s) | 423, 510, 736, 912, 2038, 2091 |
| BaeGI | GKGCMC | 4 cut(s) | 13, 315, 1374, 1912 |
| BanI | GGYRCC | 5 cut(s) | 352, 823, 934, 1829, 1940 |
| BanII | GRGCYC | 2 cut(s) | 833, 1144 |
| BauI | CACGAG | 3 cut(s) | 314, 675, 1545 |
| BbsI | GAAGAC | 1 cut(s) | 803 |
| Bbv12I | GWGCWC | 2 cut(s) | 13, 315 |
| BbvCI | CCTCAGC | 1 cut(s) | 1740 |
| BccI | CCATC | 4 cut(s) | 259, 875, 1877, 2048 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 1169, 1203, 1514, 1548 |
| BciT130I | CCWGG | 5 cut(s) | 1223, 1313, 1484, 1926, 2033 |
| BciVI | GTATCC | 1 cut(s) | 127 |
| BcnI | CCSGG | 6 cut(s) | 240, 995, 1729, 1976, 2047, 2048 |
| BcoDI | GTCTC | 4 cut(s) | 588, 638, 809, 2060 |
| BfaI | CTAG | 4 cut(s) | 20, 30, 108, 1137 |
| BfmI | CTRYAG | 1 cut(s) | 1853 |
| BfoI | RGCGCY | 4 cut(s) | 76, 827, 938, 1740 |
| BfuAI | ACCTGC | 1 cut(s) | 391 |
| BfuI | GTATCC | 1 cut(s) | 127 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 1694 |
| BglII | AGATCT | 1 cut(s) | 366 |
| BlpI | GCTNAGC | 1 cut(s) | 1733 |
| Bme18I | GGWCC | 6 cut(s) | 423, 510, 736, 912, 2038, 2091 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 2073 |
| BmeT110I | CYCGRG | 2 cut(s) | 1178, 2046 |
| BmgBI | CACGTC | 1 cut(s) | 1375 |
| BmgT120I | GGNCC | 9 cut(s) | 298, 423, 510, 736, 912, 1456, 1480, 2038, 2091 |
| BmrI | ACTGGG | 3 cut(s) | 1885, 1999, 2067 |
| BmsI | GCATC | 2 cut(s) | 1111, 1522 |
| BmuI | ACTGGG | 3 cut(s) | 1885, 1999, 2067 |
| BoxI | GACNNNNGTC | 1 cut(s) | 630 |
| BpiI | GAAGAC | 1 cut(s) | 803 |
| BplI | GAGNNNNNCTC | 6 cut(s) | 266, 298, 1970, 2002, 1972, 2004 |
| BpmI | CTGGAG | 2 cut(s) | 1087, 1733 |
| Bpu10I | CCTNAGC | 2 cut(s) | 1439, 1740 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1733 |
| BpuMI | CCSGG | 6 cut(s) | 240, 995, 1729, 1976, 2047, 2048 |
| BsaHI | GRCGYC | 3 cut(s) | 824, 935, 1090 |
| BsaI | GGTCTC | 1 cut(s) | 2060 |
| BsaWI | WCCGGW | 2 cut(s) | 231, 779 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 515, 545, 755, 785, 1262, 1292 |
| Bse118I | RCCGGY | 3 cut(s) | 213, 955, 1826 |
| Bse1I | ACTGG | 5 cut(s) | 463, 1880, 1954, 2005, 2073 |
| Bse3DI | GCAATG | 3 cut(s) | 387, 993, 1812 |
| BseBI | CCWGG | 5 cut(s) | 1223, 1313, 1484, 1926, 2033 |
| BseGI | GGATG | 4 cut(s) | 198, 1126, 2059, 2113 |
| BseMI | GCAATG | 3 cut(s) | 387, 993, 1812 |
| BseMII | CTCAG | 5 cut(s) | 1453, 1724, 1731, 2001, 2003 |
| BseNI | ACTGG | 5 cut(s) | 463, 1880, 1954, 2005, 2073 |
| BseRI | GAGGAG | 3 cut(s) | 287, 1130, 1460 |
| BseSI | GKGCMC | 4 cut(s) | 13, 315, 1374, 1912 |
| BseX3I | CGGCCG | 1 cut(s) | 1758 |
| BseYI | CCCAGC | 2 cut(s) | 645, 2024 |
| BsgI | GTGCAG | 4 cut(s) | 111, 429, 995, 1930 |
| Bsh1236I | CGCG | 9 cut(s) | 16, 330, 725, 920, 940, 1069, 1146, 1752, 2086 |
| Bsh1285I | CGRYCG | 1 cut(s) | 1761 |
| BshNI | GGYRCC | 5 cut(s) | 352, 823, 934, 1829, 1940 |
| BsiEI | CGRYCG | 1 cut(s) | 1761 |
| BsiHKAI | GWGCWC | 2 cut(s) | 13, 315 |
| BsiHKCI | CYCGRG | 2 cut(s) | 1178, 2046 |
| BslFI | GGGAC | 6 cut(s) | 393, 925, 1481, 1606, 2002, 2061 |
| BsmAI | GTCTC | 4 cut(s) | 588, 638, 809, 2060 |
| BsmBI | CGTCTC | 2 cut(s) | 638, 809 |
| BsmFI | GGGAC | 6 cut(s) | 393, 925, 1481, 1606, 2002, 2061 |
| Bso31I | GGTCTC | 1 cut(s) | 2060 |
| BsoBI | CYCGRG | 2 cut(s) | 1178, 2046 |
| Bsp1286I | GDGCHC | 6 cut(s) | 13, 315, 833, 1144, 1374, 1912 |
| Bsp143I | GATC | 5 cut(s) | 285, 366, 661, 747, 1320 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1733 |
| Bsp19I | CCATGG | 2 cut(s) | 732, 1833 |
| Bsp68I | TCGCGA | 1 cut(s) | 725 |
| BspCNI | CTCAG | 5 cut(s) | 1452, 1725, 1732, 2002, 2002 |
| BspFNI | CGCG | 9 cut(s) | 16, 330, 725, 920, 940, 1069, 1146, 1752, 2086 |
| BspMAI | CTGCAG | 1 cut(s) | 1857 |
| BspMI | ACCTGC | 1 cut(s) | 391 |
| BspPI | GGATC | 3 cut(s) | 280, 669, 1328 |
| BspQI | GCTCTTC | 1 cut(s) | 63 |
| BspT107I | GGYRCC | 5 cut(s) | 352, 823, 934, 1829, 1940 |
| BspTNI | GGTCTC | 1 cut(s) | 2060 |
| BsrBI | CCGCTC | 3 cut(s) | 1432, 1585, 2109 |
| BsrDI | GCAATG | 3 cut(s) | 387, 993, 1812 |
| BsrFI | RCCGGY | 3 cut(s) | 213, 955, 1826 |
| BsrI | ACTGG | 5 cut(s) | 463, 1880, 1954, 2005, 2073 |
| BssAI | RCCGGY | 3 cut(s) | 213, 955, 1826 |
| BssMI | GATC | 5 cut(s) | 285, 366, 661, 747, 1320 |
| BssNI | GRCGYC | 3 cut(s) | 824, 935, 1090 |
| BssSI | CACGAG | 3 cut(s) | 314, 675, 1545 |
| BssT1I | CCWWGG | 3 cut(s) | 732, 1647, 1833 |
| Bst2BI | CACGAG | 3 cut(s) | 314, 675, 1545 |
| Bst2UI | CCWGG | 5 cut(s) | 1223, 1313, 1484, 1926, 2033 |
| Bst4CI | ACNGT | 7 cut(s) | 199, 431, 740, 802, 1262, 1529, 1596 |
| Bst6I | CTCTTC | 2 cut(s) | 63, 1107 |
| BstACI | GRCGYC | 3 cut(s) | 824, 935, 1090 |
| BstDEI | CTNAG | 6 cut(s) | 76, 1439, 1733, 1740, 1989, 2010 |
| BstDSI | CCRYGG | 7 cut(s) | 483, 732, 846, 938, 1125, 1767, 1833 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 566 |
| BstF5I | GGATG | 4 cut(s) | 198, 1126, 2059, 2113 |
| BstFNI | CGCG | 9 cut(s) | 16, 330, 725, 920, 940, 1069, 1146, 1752, 2086 |
| BstH2I | RGCGCY | 4 cut(s) | 76, 827, 938, 1740 |
| BstHHI | GCGC | 8 cut(s) | 75, 826, 920, 937, 993, 1739, 1754, 2086 |
| BstKTI | GATC | 5 cut(s) | 288, 369, 664, 750, 1323 |
| BstMAI | GTCTC | 4 cut(s) | 588, 638, 809, 2060 |
| BstMBI | GATC | 5 cut(s) | 285, 366, 661, 747, 1320 |
| BstMCI | CGRYCG | 1 cut(s) | 1761 |
| BstNI | CCWGG | 5 cut(s) | 1223, 1313, 1484, 1926, 2033 |
| BstNSI | RCATGY | 3 cut(s) | 418, 598, 1621 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 630 |
| BstSFI | CTRYAG | 1 cut(s) | 1853 |
| BstSLI | GKGCMC | 4 cut(s) | 13, 315, 1374, 1912 |
| BstUI | CGCG | 9 cut(s) | 16, 330, 725, 920, 940, 1069, 1146, 1752, 2086 |
| BstV2I | GAAGAC | 1 cut(s) | 803 |
| BstX2I | RGATCY | 1 cut(s) | 366 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1573 |
| BstYI | RGATCY | 1 cut(s) | 366 |
| BstZI | CGGCCG | 1 cut(s) | 1758 |
| BsuI | GTATCC | 1 cut(s) | 127 |
| BtgI | CCRYGG | 7 cut(s) | 483, 732, 846, 938, 1125, 1767, 1833 |
| BtrI | CACGTC | 1 cut(s) | 1375 |
| BtsCI | GGATG | 4 cut(s) | 198, 1126, 2059, 2113 |
| BtsIMutI | CAGTG | 2 cut(s) | 807, 1947 |
| BtuMI | TCGCGA | 1 cut(s) | 725 |
| BveI | ACCTGC | 1 cut(s) | 391 |
| CfoI | GCGC | 8 cut(s) | 75, 826, 920, 937, 993, 1739, 1754, 2086 |
| Cfr10I | RCCGGY | 3 cut(s) | 213, 955, 1826 |
| Cfr13I | GGNCC | 9 cut(s) | 298, 423, 510, 736, 912, 1456, 1480, 2038, 2091 |
| Cfr42I | CCGCGG | 1 cut(s) | 941 |
| Cfr9I | CCCGGG | 1 cut(s) | 2046 |
| CseI | GACGC | 5 cut(s) | 5, 245, 826, 1079, 1550 |
| Csp6I | GTAC | 4 cut(s) | 441, 499, 1212, 1777 |
| CviAII | CATG | 8 cut(s) | 302, 415, 595, 733, 769, 1391, 1618, 1834 |
| CviQI | GTAC | 4 cut(s) | 441, 499, 1212, 1777 |
| DdeI | CTNAG | 6 cut(s) | 76, 1439, 1733, 1740, 1989, 2010 |
| DinI | GGCGCC | 2 cut(s) | 825, 936 |
| DpnI | GATC | 5 cut(s) | 287, 368, 663, 749, 1322 |
| DpnII | GATC | 5 cut(s) | 285, 366, 661, 747, 1320 |
| DriI | GACNNNNNGTC | 1 cut(s) | 2073 |
| EaeI | YGGCCR | 4 cut(s) | 957, 1557, 1641, 1758 |
| EagI | CGGCCG | 1 cut(s) | 1758 |
| Eam1104I | CTCTTC | 2 cut(s) | 63, 1107 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 2073 |
| EarI | CTCTTC | 2 cut(s) | 63, 1107 |
| EciI | GGCGGA | 9 cut(s) | 249, 450, 576, 622, 803, 1013, 1983, 2066, 2106 |
| EclXI | CGGCCG | 1 cut(s) | 1758 |
| Eco130I | CCWWGG | 3 cut(s) | 732, 1647, 1833 |
| Eco147I | AGGCCT | 2 cut(s) | 281, 1048 |
| Eco24I | GRGCYC | 2 cut(s) | 833, 1144 |
| Eco31I | GGTCTC | 1 cut(s) | 2060 |
| Eco47I | GGWCC | 6 cut(s) | 423, 510, 736, 912, 2038, 2091 |
| Eco47III | AGCGCT | 2 cut(s) | 74, 1738 |
| Eco52I | CGGCCG | 1 cut(s) | 1758 |
| Eco57I | CTGAAG | 5 cut(s) | 239, 347, 1061, 1339, 1655 |
| Eco88I | CYCGRG | 2 cut(s) | 1178, 2046 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 566 |
| EcoRII | CCWGG | 5 cut(s) | 1221, 1311, 1482, 1924, 2031 |
| EcoT14I | CCWWGG | 3 cut(s) | 732, 1647, 1833 |
| EcoT38I | GRGCYC | 2 cut(s) | 833, 1144 |
| EgeI | GGCGCC | 2 cut(s) | 825, 936 |
| EheI | GGCGCC | 2 cut(s) | 825, 936 |
| ErhI | CCWWGG | 3 cut(s) | 732, 1647, 1833 |
| Esp3I | CGTCTC | 2 cut(s) | 638, 809 |
| FaeI | CATG | 8 cut(s) | 305, 418, 598, 736, 772, 1394, 1621, 1837 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1156, 1188 |
| FaqI | GGGAC | 6 cut(s) | 393, 925, 1481, 1606, 2002, 2061 |
| FatI | CATG | 8 cut(s) | 301, 414, 594, 732, 768, 1390, 1617, 1833 |
| FblI | GTMKAC | 2 cut(s) | 1791, 1895 |
| FokI | GGATG | 4 cut(s) | 205, 1133, 2066, 2100 |
| FriOI | GRGCYC | 2 cut(s) | 833, 1144 |
| FspBI | CTAG | 4 cut(s) | 20, 30, 108, 1137 |
| GlaI | GCGC | 8 cut(s) | 74, 825, 919, 936, 992, 1738, 1753, 2085 |
| GsaI | CCCAGC | 2 cut(s) | 649, 2028 |
| GsuI | CTGGAG | 2 cut(s) | 1087, 1733 |
| HaeII | RGCGCY | 4 cut(s) | 76, 827, 938, 1740 |
| HgaI | GACGC | 5 cut(s) | 5, 245, 826, 1079, 1550 |
| HhaI | GCGC | 8 cut(s) | 75, 826, 920, 937, 993, 1739, 1754, 2086 |
| Hin1I | GRCGYC | 3 cut(s) | 824, 935, 1090 |
| Hin1II | CATG | 8 cut(s) | 305, 418, 598, 736, 772, 1394, 1621, 1837 |
| Hin6I | GCGC | 8 cut(s) | 73, 824, 918, 935, 991, 1737, 1752, 2084 |
| HinP1I | GCGC | 8 cut(s) | 73, 824, 918, 935, 991, 1737, 1752, 2084 |
| HincII | GTYRAC | 3 cut(s) | 211, 1094, 1896 |
| HindII | GTYRAC | 3 cut(s) | 211, 1094, 1896 |
| HphI | GGTGA | 6 cut(s) | 259, 896, 934, 1000, 1274, 1730 |
| Hpy166II | GTNNAC | 8 cut(s) | 11, 211, 313, 1094, 1265, 1792, 1896, 2041 |
| Hpy188I | TCNGA | 7 cut(s) | 366, 547, 814, 838, 1329, 2011, 2095 |
| Hpy188III | TCNNGA | 5 cut(s) | 20, 713, 724, 878, 1513 |
| Hpy8I | GTNNAC | 8 cut(s) | 11, 211, 313, 1094, 1265, 1792, 1896, 2041 |
| Hpy99I | CGWCG | 4 cut(s) | 532, 697, 1379, 1897 |
| HpyCH4III | ACNGT | 7 cut(s) | 199, 431, 740, 802, 1262, 1529, 1596 |
| HpyCH4IV | ACGT | 3 cut(s) | 477, 530, 1374 |
| HpyCH4V | TGCA | 9 cut(s) | 11, 92, 305, 313, 446, 976, 1390, 1855, 1947 |
| HpyF3I | CTNAG | 6 cut(s) | 76, 1439, 1733, 1740, 1989, 2010 |
| HpySE526I | ACGT | 3 cut(s) | 477, 530, 1374 |
| Hsp92I | GRCGYC | 3 cut(s) | 824, 935, 1090 |
| Hsp92II | CATG | 8 cut(s) | 305, 418, 598, 736, 772, 1394, 1621, 1837 |
| HspAI | GCGC | 8 cut(s) | 73, 824, 918, 935, 991, 1737, 1752, 2084 |
| KasI | GGCGCC | 2 cut(s) | 823, 934 |
| KroI | GCCGGC | 1 cut(s) | 955 |
| KroNI | GCCGGC | 1 cut(s) | 957 |
| KspI | CCGCGG | 1 cut(s) | 941 |
| Kzo9I | GATC | 5 cut(s) | 285, 366, 661, 747, 1320 |
| LguI | GCTCTTC | 1 cut(s) | 63 |
| LmnI | GCTCC | 7 cut(s) | 523, 790, 1024, 1189, 1582, 1609, 1865 |
| LweI | GCATC | 2 cut(s) | 1111, 1522 |
| MaeI | CTAG | 4 cut(s) | 20, 30, 108, 1137 |
| MaeII | ACGT | 3 cut(s) | 477, 530, 1374 |
| MaeIII | GTNAC | 4 cut(s) | 337, 884, 1006, 1217 |
| MalI | GATC | 5 cut(s) | 287, 368, 663, 749, 1322 |
| MbiI | CCGCTC | 3 cut(s) | 1432, 1585, 2109 |
| MboI | GATC | 5 cut(s) | 285, 366, 661, 747, 1320 |
| MboII | GAAGA | 6 cut(s) | 80, 808, 991, 1124, 1168, 1894 |
| MflI | RGATCY | 1 cut(s) | 366 |
| MhlI | GDGCHC | 6 cut(s) | 13, 315, 833, 1144, 1374, 1912 |
| MluCI | AATT | 3 cut(s) | 537, 616, 754 |
| Mly113I | GGCGCC | 2 cut(s) | 824, 935 |
| MmeI | TCCRAC | 5 cut(s) | 525, 537, 1002, 1587, 2118 |
| MroNI | GCCGGC | 1 cut(s) | 955 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1668 |
| MseI | TTAA | 3 cut(s) | 540, 1341, 1412 |
| MslI | CAYNNNNRTG | 2 cut(s) | 879, 1070 |
| MspA1I | CMGCKG | 6 cut(s) | 99, 296, 940, 1107, 1675, 1993 |
| MvaI | CCWGG | 5 cut(s) | 1223, 1313, 1484, 1926, 2033 |
| MvnI | CGCG | 9 cut(s) | 16, 330, 725, 920, 940, 1069, 1146, 1752, 2086 |
| NaeI | GCCGGC | 1 cut(s) | 957 |
| NarI | GGCGCC | 2 cut(s) | 824, 935 |
| NciI | CCSGG | 6 cut(s) | 240, 995, 1729, 1976, 2047, 2048 |
| NcoI | CCATGG | 2 cut(s) | 732, 1833 |
| NdeII | GATC | 5 cut(s) | 285, 366, 661, 747, 1320 |
| NgoMIV | GCCGGC | 1 cut(s) | 955 |
| NlaIII | CATG | 8 cut(s) | 305, 418, 598, 736, 772, 1394, 1621, 1837 |
| NmeAIII | GCCGAG | 4 cut(s) | 769, 852, 1270, 1723 |
| NmuCI | GTSAC | 4 cut(s) | 337, 884, 1006, 1217 |
| NruI | TCGCGA | 1 cut(s) | 725 |
| NspI | RCATGY | 3 cut(s) | 418, 598, 1621 |
| OliI | CACNNNNGTG | 1 cut(s) | 1070 |
| PceI | AGGCCT | 2 cut(s) | 281, 1048 |
| PciI | ACATGT | 3 cut(s) | 414, 594, 1617 |
| PciSI | GCTCTTC | 1 cut(s) | 63 |
| PcsI | WCGNNNNNNNCGW | 3 cut(s) | 13, 168, 824 |
| PdiI | GCCGGC | 1 cut(s) | 957 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1668 |
| PfeI | GAWTC | 2 cut(s) | 610, 809 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1875 |
| PfoI | TCCNGGA | 1 cut(s) | 1974 |
| PluTI | GGCGCC | 2 cut(s) | 827, 938 |
| PscI | ACATGT | 3 cut(s) | 414, 594, 1617 |
| PshAI | GACNNNNGTC | 1 cut(s) | 630 |
| PsiI | TTATAA | 1 cut(s) | 536 |
| Psp6I | CCWGG | 5 cut(s) | 1221, 1311, 1482, 1924, 2031 |
| PspFI | CCCAGC | 2 cut(s) | 645, 2024 |
| PspGI | CCWGG | 5 cut(s) | 1221, 1311, 1482, 1924, 2031 |
| PspPI | GGNCC | 9 cut(s) | 298, 423, 510, 736, 912, 1456, 1480, 2038, 2091 |
| PstI | CTGCAG | 1 cut(s) | 1857 |
| PsuI | RGATCY | 1 cut(s) | 366 |
| RruI | TCGCGA | 1 cut(s) | 725 |
| RsaI | GTAC | 4 cut(s) | 442, 500, 1213, 1778 |
| RsaNI | GTAC | 4 cut(s) | 441, 499, 1212, 1777 |
| RseI | CAYNNNNRTG | 2 cut(s) | 879, 1070 |
| SacII | CCGCGG | 1 cut(s) | 941 |
| SalI | GTCGAC | 1 cut(s) | 1894 |
| SapI | GCTCTTC | 1 cut(s) | 63 |
| SaqAI | TTAA | 3 cut(s) | 540, 1341, 1412 |
| Sau3AI | GATC | 5 cut(s) | 285, 366, 661, 747, 1320 |
| Sau96I | GGNCC | 9 cut(s) | 298, 423, 510, 736, 912, 1456, 1480, 2038, 2091 |
| SduI | GDGCHC | 6 cut(s) | 13, 315, 833, 1144, 1374, 1912 |
| SfaNI | GCATC | 2 cut(s) | 1111, 1522 |
| SfcI | CTRYAG | 1 cut(s) | 1853 |
| SfoI | GGCGCC | 2 cut(s) | 825, 936 |
| Sfr303I | CCGCGG | 1 cut(s) | 941 |
| SgrBI | CCGCGG | 1 cut(s) | 941 |
| SinI | GGWCC | 6 cut(s) | 423, 510, 736, 912, 2038, 2091 |
| SmaI | CCCGGG | 1 cut(s) | 2048 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 879, 1070 |
| Sse9I | AATT | 3 cut(s) | 537, 616, 754 |
| SseBI | AGGCCT | 2 cut(s) | 281, 1048 |
| SspDI | GGCGCC | 2 cut(s) | 823, 934 |
| SspMI | CTAG | 4 cut(s) | 20, 30, 108, 1137 |
| StuI | AGGCCT | 2 cut(s) | 281, 1048 |
| StyI | CCWWGG | 3 cut(s) | 732, 1647, 1833 |
| TaaI | ACNGT | 7 cut(s) | 199, 431, 740, 802, 1262, 1529, 1596 |
| TaiI | ACGT | 3 cut(s) | 480, 533, 1377 |
| TaqI | TCGA | 6 cut(s) | 156, 284, 750, 1503, 1872, 1895 |
| TaqII | GACCGA | 1 cut(s) | 1826 |
| TasI | AATT | 3 cut(s) | 537, 616, 754 |
| TfiI | GAWTC | 2 cut(s) | 610, 809 |
| Tru1I | TTAA | 3 cut(s) | 540, 1341, 1412 |
| Tru9I | TTAA | 3 cut(s) | 540, 1341, 1412 |
| TscAI | CASTG | 2 cut(s) | 807, 1954 |
| TseFI | GTSAC | 4 cut(s) | 337, 884, 1006, 1217 |
| Tsp45I | GTSAC | 4 cut(s) | 337, 884, 1006, 1217 |
| TspDTI | ATGAA | 2 cut(s) | 542, 1407 |
| TspGWI | ACGGA | 4 cut(s) | 500, 620, 681, 1881 |
| TspMI | CCCGGG | 1 cut(s) | 2046 |
| TspRI | CASTG | 2 cut(s) | 807, 1954 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1875 |
| VneI | GTGCAC | 2 cut(s) | 9, 311 |
| VpaK11BI | GGWCC | 6 cut(s) | 423, 510, 736, 912, 2038, 2091 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 566 |
| XbaI | TCTAGA | 1 cut(s) | 19 |
| XceI | RCATGY | 3 cut(s) | 418, 598, 1621 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 1018, 1840 |
| XmaI | CCCGGG | 1 cut(s) | 2046 |
| XmiI | GTMKAC | 2 cut(s) | 1791, 1895 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1668 |
| XspI | CTAG | 4 cut(s) | 20, 30, 108, 1137 |