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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 12 |
| AccB1I | GGYRCC | 4 cut(s) | 320, 1147, 1904, 1940 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 144, 1950 |
| AccBSI | CCGCTC | 6 cut(s) | 1293, 1369, 1507, 1648, 1660, 2052 |
| AccI | GTMKAC | 2 cut(s) | 1406, 1462 |
| AccII | CGCG | 6 cut(s) | 62, 172, 401, 464, 1182, 1221 |
| AclI | AACGTT | 1 cut(s) | 1635 |
| AclWI | GGATC | 3 cut(s) | 49, 1716, 1735 |
| AcoI | YGGCCR | 4 cut(s) | 3, 1611, 1716, 1833 |
| AcsI | RAATTY | 2 cut(s) | 73, 556 |
| AcuI | CTGAAG | 3 cut(s) | 66, 395, 1730 |
| AcyI | GRCGYC | 6 cut(s) | 9, 930, 1131, 1617, 1941, 2102 |
| AfaI | GTAC | 7 cut(s) | 221, 575, 668, 710, 986, 1288, 1871 |
| AflIII | ACRYGT | 1 cut(s) | 1692 |
| AgsI | TTSAA | 3 cut(s) | 441, 899, 2042 |
| AhdI | GACNNNNNGTC | 2 cut(s) | 661, 2164 |
| AjnI | CCWGG | 6 cut(s) | 585, 972, 1476, 1497, 1557, 2029 |
| AleI | CACNNNNGTG | 2 cut(s) | 1092, 1268 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1332, 1364 |
| Alw21I | GWGCWC | 3 cut(s) | 471, 1046, 1515 |
| Alw26I | GTCTC | 2 cut(s) | 852, 2151 |
| Alw44I | GTGCAC | 1 cut(s) | 467 |
| AlwI | GGATC | 3 cut(s) | 49, 1716, 1735 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1498 |
| Ama87I | CYCGRG | 2 cut(s) | 2053, 2137 |
| ApaI | GGGCCC | 1 cut(s) | 1219 |
| ApaLI | GTGCAC | 1 cut(s) | 467 |
| ApeKI | GCWGC | 8 cut(s) | 200, 206, 1066, 1829, 1927, 1930, 1978, 2024 |
| ApoI | RAATTY | 2 cut(s) | 73, 556 |
| AspA2I | CCTAGG | 1 cut(s) | 2177 |
| AspLEI | GCGC | 8 cut(s) | 62, 231, 401, 631, 1039, 1168, 1182, 1943 |
| AsuC2I | CCSGG | 7 cut(s) | 177, 909, 1025, 1058, 1213, 2138, 2139 |
| AsuHPI | GGTGA | 6 cut(s) | 415, 1030, 1109, 1349, 1349, 1805 |
| AvaI | CYCGRG | 2 cut(s) | 2053, 2137 |
| AvaII | GGWCC | 7 cut(s) | 413, 533, 720, 949, 1054, 1125, 1531 |
| AvrII | CCTAGG | 1 cut(s) | 2177 |
| AxyI | CCTNAGG | 1 cut(s) | 650 |
| BaeGI | GKGCMC | 4 cut(s) | 471, 1219, 1449, 1909 |
| BanI | GGYRCC | 4 cut(s) | 320, 1147, 1904, 1940 |
| BanII | GRGCYC | 3 cut(s) | 1046, 1219, 1515 |
| BauI | CACGAG | 2 cut(s) | 470, 888 |
| BbsI | GAAGAC | 1 cut(s) | 1016 |
| Bbv12I | GWGCWC | 3 cut(s) | 471, 1046, 1515 |
| BbvCI | CCTCAGC | 1 cut(s) | 1815 |
| BbvI | GCAGC | 8 cut(s) | 187, 193, 1053, 1816, 1914, 1942, 1990, 2011 |
| BccI | CCATC | 6 cut(s) | 311, 776, 1675, 1952, 1990, 2139 |
| BceAI | ACGGC | 6 cut(s) | 711, 878, 909, 1193, 1397, 1439 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1589, 1623 |
| BciT130I | CCWGG | 6 cut(s) | 587, 974, 1478, 1499, 1559, 2031 |
| BciVI | GTATCC | 1 cut(s) | 283 |
| BcnI | CCSGG | 7 cut(s) | 177, 909, 1025, 1058, 1213, 2138, 2139 |
| BcoDI | GTCTC | 2 cut(s) | 852, 2151 |
| BfaI | CTAG | 7 cut(s) | 186, 233, 1352, 1787, 1910, 2124, 2178 |
| BfmI | CTRYAG | 2 cut(s) | 131, 1928 |
| BfoI | RGCGCY | 5 cut(s) | 232, 632, 1040, 1169, 1944 |
| BfuI | GTATCC | 1 cut(s) | 283 |
| BlnI | CCTAGG | 1 cut(s) | 2177 |
| BlpI | GCTNAGC | 2 cut(s) | 1040, 1764 |
| Bme18I | GGWCC | 7 cut(s) | 413, 533, 720, 949, 1054, 1125, 1531 |
| BmeRI | GACNNNNNGTC | 2 cut(s) | 661, 2164 |
| BmeT110I | CYCGRG | 2 cut(s) | 2053, 2137 |
| BmrI | ACTGGG | 2 cut(s) | 1960, 2158 |
| BmsI | GCATC | 5 cut(s) | 176, 1597, 1914, 1956, 1970 |
| BmuI | ACTGGG | 2 cut(s) | 1960, 2158 |
| BoxI | GACNNNNGTC | 3 cut(s) | 844, 1130, 1412 |
| BpiI | GAAGAC | 1 cut(s) | 1016 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 2075, 2107 |
| BpmI | CTGGAG | 2 cut(s) | 235, 1520 |
| Bpu10I | CCTNAGC | 2 cut(s) | 1514, 1815 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 1040, 1764 |
| BpuMI | CCSGG | 7 cut(s) | 177, 909, 1025, 1058, 1213, 2138, 2139 |
| Bsa29I | ATCGAT | 1 cut(s) | 1964 |
| BsaAI | YACGTR | 1 cut(s) | 577 |
| BsaHI | GRCGYC | 6 cut(s) | 9, 930, 1131, 1617, 1941, 2102 |
| BsaI | GGTCTC | 1 cut(s) | 2151 |
| BsaWI | WCCGGW | 1 cut(s) | 387 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 725, 755 |
| Bse118I | RCCGGY | 4 cut(s) | 369, 1127, 1168, 1969 |
| Bse1I | ACTGG | 5 cut(s) | 449, 573, 674, 1955, 2164 |
| Bse21I | CCTNAGG | 1 cut(s) | 650 |
| BseBI | CCWGG | 6 cut(s) | 587, 974, 1478, 1499, 1559, 2031 |
| BseCI | ATCGAT | 1 cut(s) | 1964 |
| BseGI | GGATG | 5 cut(s) | 322, 354, 768, 880, 2150 |
| BseNI | ACTGG | 5 cut(s) | 449, 573, 674, 1955, 2164 |
| BseSI | GKGCMC | 4 cut(s) | 471, 1219, 1449, 1909 |
| BseX3I | CGGCCG | 2 cut(s) | 1611, 1833 |
| BseXI | GCAGC | 8 cut(s) | 187, 193, 1053, 1816, 1914, 1942, 1990, 2011 |
| BseYI | CCCAGC | 3 cut(s) | 409, 1372, 1546 |
| BsgI | GTGCAG | 2 cut(s) | 126, 1997 |
| Bsh1236I | CGCG | 6 cut(s) | 62, 172, 401, 464, 1182, 1221 |
| Bsh1285I | CGRYCG | 6 cut(s) | 540, 1406, 1410, 1614, 1836, 1974 |
| BshNI | GGYRCC | 4 cut(s) | 320, 1147, 1904, 1940 |
| BshVI | ATCGAT | 1 cut(s) | 1964 |
| BsiEI | CGRYCG | 6 cut(s) | 540, 1406, 1410, 1614, 1836, 1974 |
| BsiHKAI | GWGCWC | 3 cut(s) | 471, 1046, 1515 |
| BsiHKCI | CYCGRG | 2 cut(s) | 2053, 2137 |
| BslFI | GGGAC | 5 cut(s) | 161, 668, 1138, 1681, 2152 |
| BsmAI | GTCTC | 2 cut(s) | 852, 2151 |
| BsmBI | CGTCTC | 1 cut(s) | 852 |
| BsmFI | GGGAC | 5 cut(s) | 161, 668, 1138, 1681, 2152 |
| Bso31I | GGTCTC | 1 cut(s) | 2151 |
| BsoBI | CYCGRG | 2 cut(s) | 2053, 2137 |
| Bsp120I | GGGCCC | 1 cut(s) | 1215 |
| Bsp1286I | GDGCHC | 6 cut(s) | 471, 1046, 1219, 1449, 1515, 1909 |
| Bsp143I | GATC | 6 cut(s) | 41, 639, 1354, 1708, 1740, 1776 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 1040, 1764 |
| Bsp19I | CCATGG | 2 cut(s) | 945, 1621 |
| BspDI | ATCGAT | 1 cut(s) | 1964 |
| BspFNI | CGCG | 6 cut(s) | 62, 172, 401, 464, 1182, 1221 |
| BspMAI | CTGCAG | 1 cut(s) | 1932 |
| BspPI | GGATC | 3 cut(s) | 49, 1716, 1735 |
| BspQI | GCTCTTC | 1 cut(s) | 219 |
| BspT107I | GGYRCC | 4 cut(s) | 320, 1147, 1904, 1940 |
| BspTNI | GGTCTC | 1 cut(s) | 2151 |
| BsrBI | CCGCTC | 6 cut(s) | 1293, 1369, 1507, 1648, 1660, 2052 |
| BsrFI | RCCGGY | 4 cut(s) | 369, 1127, 1168, 1969 |
| BsrI | ACTGG | 5 cut(s) | 449, 573, 674, 1955, 2164 |
| BssAI | RCCGGY | 4 cut(s) | 369, 1127, 1168, 1969 |
| BssMI | GATC | 6 cut(s) | 41, 639, 1354, 1708, 1740, 1776 |
| BssNI | GRCGYC | 6 cut(s) | 9, 930, 1131, 1617, 1941, 2102 |
| BssSI | CACGAG | 2 cut(s) | 470, 888 |
| BssT1I | CCWWGG | 6 cut(s) | 622, 945, 1090, 1621, 1722, 2177 |
| Bst2BI | CACGAG | 2 cut(s) | 470, 888 |
| Bst2UI | CCWGG | 6 cut(s) | 587, 974, 1478, 1499, 1559, 2031 |
| Bst4CI | ACNGT | 9 cut(s) | 154, 424, 541, 953, 1152, 1282, 1337, 1671, 2153 |
| Bst6I | CTCTTC | 1 cut(s) | 219 |
| BstACI | GRCGYC | 6 cut(s) | 9, 930, 1131, 1617, 1941, 2102 |
| BstBAI | YACGTR | 1 cut(s) | 577 |
| BstDSI | CCRYGG | 7 cut(s) | 143, 462, 540, 693, 945, 1151, 1621 |
| BstEII | GGTNACC | 1 cut(s) | 1207 |
| BstF5I | GGATG | 5 cut(s) | 322, 354, 768, 880, 2150 |
| BstFNI | CGCG | 6 cut(s) | 62, 172, 401, 464, 1182, 1221 |
| BstH2I | RGCGCY | 5 cut(s) | 232, 632, 1040, 1169, 1944 |
| BstHHI | GCGC | 8 cut(s) | 62, 231, 401, 631, 1039, 1168, 1182, 1943 |
| BstKTI | GATC | 6 cut(s) | 44, 642, 1357, 1711, 1743, 1779 |
| BstMAI | GTCTC | 2 cut(s) | 852, 2151 |
| BstMBI | GATC | 6 cut(s) | 41, 639, 1354, 1708, 1740, 1776 |
| BstMCI | CGRYCG | 6 cut(s) | 540, 1406, 1410, 1614, 1836, 1974 |
| BstNI | CCWGG | 6 cut(s) | 587, 974, 1478, 1499, 1559, 2031 |
| BstNSI | RCATGY | 1 cut(s) | 1696 |
| BstPAI | GACNNNNGTC | 3 cut(s) | 844, 1130, 1412 |
| BstPI | GGTNACC | 1 cut(s) | 1207 |
| BstSFI | CTRYAG | 2 cut(s) | 131, 1928 |
| BstSLI | GKGCMC | 4 cut(s) | 471, 1219, 1449, 1909 |
| BstUI | CGCG | 6 cut(s) | 62, 172, 401, 464, 1182, 1221 |
| BstV1I | GCAGC | 8 cut(s) | 187, 193, 1053, 1816, 1914, 1942, 1990, 2011 |
| BstV2I | GAAGAC | 1 cut(s) | 1016 |
| BstX2I | RGATCY | 2 cut(s) | 41, 1740 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 1094, 1270 |
| BstYI | RGATCY | 2 cut(s) | 41, 1740 |
| BstZI | CGGCCG | 2 cut(s) | 1611, 1833 |
| Bsu15I | ATCGAT | 1 cut(s) | 1964 |
| Bsu36I | CCTNAGG | 1 cut(s) | 650 |
| BsuI | GTATCC | 1 cut(s) | 283 |
| BsuTUI | ATCGAT | 1 cut(s) | 1964 |
| BtgI | CCRYGG | 7 cut(s) | 143, 462, 540, 693, 945, 1151, 1621 |
| BtgZI | GCGATG | 2 cut(s) | 153, 1620 |
| BtsCI | GGATG | 5 cut(s) | 322, 354, 768, 880, 2150 |
| BtsI | GCAGTG | 3 cut(s) | 34, 116, 2019 |
| BtsIMutI | CAGTG | 6 cut(s) | 34, 116, 456, 1263, 1880, 2019 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1498 |
| CciNI | GCGGCCGC | 1 cut(s) | 1833 |
| CfoI | GCGC | 8 cut(s) | 62, 231, 401, 631, 1039, 1168, 1182, 1943 |
| Cfr10I | RCCGGY | 4 cut(s) | 369, 1127, 1168, 1969 |
| Cfr42I | CCGCGG | 1 cut(s) | 465 |
| Cfr9I | CCCGGG | 1 cut(s) | 2137 |
| ClaI | ATCGAT | 1 cut(s) | 1964 |
| CseI | GACGC | 7 cut(s) | 80, 161, 938, 1120, 1593, 1625, 2110 |
| Csp6I | GTAC | 7 cut(s) | 220, 574, 667, 709, 985, 1287, 1870 |
| CviAII | CATG | 7 cut(s) | 946, 982, 1466, 1622, 1693, 1826, 2036 |
| CviQI | GTAC | 7 cut(s) | 220, 574, 667, 709, 985, 1287, 1870 |
| DinI | GGCGCC | 1 cut(s) | 1942 |
| DpnI | GATC | 6 cut(s) | 43, 641, 1356, 1710, 1742, 1778 |
| DpnII | GATC | 6 cut(s) | 41, 639, 1354, 1708, 1740, 1776 |
| DriI | GACNNNNNGTC | 2 cut(s) | 661, 2164 |
| EaeI | YGGCCR | 4 cut(s) | 3, 1611, 1716, 1833 |
| EagI | CGGCCG | 2 cut(s) | 1611, 1833 |
| Eam1104I | CTCTTC | 1 cut(s) | 219 |
| Eam1105I | GACNNNNNGTC | 2 cut(s) | 661, 2164 |
| EarI | CTCTTC | 1 cut(s) | 219 |
| Ecl136II | GAGCTC | 2 cut(s) | 1044, 1513 |
| EclXI | CGGCCG | 2 cut(s) | 1611, 1833 |
| Eco130I | CCWWGG | 6 cut(s) | 622, 945, 1090, 1621, 1722, 2177 |
| Eco24I | GRGCYC | 3 cut(s) | 1046, 1219, 1515 |
| Eco31I | GGTCTC | 1 cut(s) | 2151 |
| Eco47I | GGWCC | 7 cut(s) | 413, 533, 720, 949, 1054, 1125, 1531 |
| Eco52I | CGGCCG | 2 cut(s) | 1611, 1833 |
| Eco53kI | GAGCTC | 2 cut(s) | 1044, 1513 |
| Eco57I | CTGAAG | 3 cut(s) | 66, 395, 1730 |
| Eco81I | CCTNAGG | 1 cut(s) | 650 |
| Eco88I | CYCGRG | 2 cut(s) | 2053, 2137 |
| Eco91I | GGTNACC | 1 cut(s) | 1207 |
| EcoICRI | GAGCTC | 2 cut(s) | 1044, 1513 |
| EcoO109I | RGGNCCY | 2 cut(s) | 1054, 1215 |
| EcoO65I | GGTNACC | 1 cut(s) | 1207 |
| EcoRII | CCWGG | 6 cut(s) | 585, 972, 1476, 1497, 1557, 2029 |
| EcoT14I | CCWWGG | 6 cut(s) | 622, 945, 1090, 1621, 1722, 2177 |
| EcoT38I | GRGCYC | 3 cut(s) | 1046, 1219, 1515 |
| EgeI | GGCGCC | 1 cut(s) | 1942 |
| EheI | GGCGCC | 1 cut(s) | 1942 |
| ErhI | CCWWGG | 6 cut(s) | 622, 945, 1090, 1621, 1722, 2177 |
| Esp3I | CGTCTC | 1 cut(s) | 852 |
| FaeI | CATG | 7 cut(s) | 949, 985, 1469, 1625, 1696, 1829, 2039 |
| FaqI | GGGAC | 5 cut(s) | 161, 668, 1138, 1681, 2152 |
| FatI | CATG | 7 cut(s) | 945, 981, 1465, 1621, 1692, 1825, 2035 |
| FblI | GTMKAC | 2 cut(s) | 1406, 1462 |
| FokI | GGATG | 5 cut(s) | 329, 361, 755, 887, 2157 |
| FriOI | GRGCYC | 3 cut(s) | 1046, 1219, 1515 |
| FspBI | CTAG | 7 cut(s) | 186, 233, 1352, 1787, 1910, 2124, 2178 |
| GlaI | GCGC | 8 cut(s) | 61, 230, 400, 630, 1038, 1167, 1181, 1942 |
| GsaI | CCCAGC | 3 cut(s) | 413, 1376, 1550 |
| GsuI | CTGGAG | 2 cut(s) | 235, 1520 |
| HaeII | RGCGCY | 5 cut(s) | 232, 632, 1040, 1169, 1944 |
| HgaI | GACGC | 7 cut(s) | 80, 161, 938, 1120, 1593, 1625, 2110 |
| HhaI | GCGC | 8 cut(s) | 62, 231, 401, 631, 1039, 1168, 1182, 1943 |
| Hin1I | GRCGYC | 6 cut(s) | 9, 930, 1131, 1617, 1941, 2102 |
| Hin1II | CATG | 7 cut(s) | 949, 985, 1469, 1625, 1696, 1829, 2039 |
| Hin6I | GCGC | 8 cut(s) | 60, 229, 399, 629, 1037, 1166, 1180, 1941 |
| HinP1I | GCGC | 8 cut(s) | 60, 229, 399, 629, 1037, 1166, 1180, 1941 |
| HincII | GTYRAC | 3 cut(s) | 331, 367, 1407 |
| HindII | GTYRAC | 3 cut(s) | 331, 367, 1407 |
| HphI | GGTGA | 6 cut(s) | 415, 1030, 1109, 1349, 1349, 1805 |
| Hpy166II | GTNNAC | 9 cut(s) | 331, 367, 469, 574, 607, 1021, 1340, 1407, 1463 |
| Hpy188I | TCNGA | 8 cut(s) | 46, 757, 773, 1008, 1051, 1987, 2116, 2186 |
| Hpy188III | TCNNGA | 6 cut(s) | 39, 643, 1135, 1537, 2081, 2124 |
| Hpy8I | GTNNAC | 9 cut(s) | 331, 367, 469, 574, 607, 1021, 1340, 1407, 1463 |
| Hpy99I | CGWCG | 6 cut(s) | 11, 424, 621, 742, 1587, 1619 |
| HpyAV | CCTTC | 7 cut(s) | 508, 524, 691, 943, 1546, 1754, 1891 |
| HpyCH4III | ACNGT | 9 cut(s) | 154, 424, 541, 953, 1152, 1282, 1337, 1671, 2153 |
| HpyCH4IV | ACGT | 5 cut(s) | 9, 576, 740, 1449, 1635 |
| HpyCH4V | TGCA | 6 cut(s) | 107, 167, 362, 469, 1930, 1978 |
| HpySE526I | ACGT | 5 cut(s) | 9, 576, 740, 1449, 1635 |
| Hsp92I | GRCGYC | 6 cut(s) | 9, 930, 1131, 1617, 1941, 2102 |
| Hsp92II | CATG | 7 cut(s) | 949, 985, 1469, 1625, 1696, 1829, 2039 |
| HspAI | GCGC | 8 cut(s) | 60, 229, 399, 629, 1037, 1166, 1180, 1941 |
| KasI | GGCGCC | 1 cut(s) | 1940 |
| KroI | GCCGGC | 1 cut(s) | 1168 |
| KroNI | GCCGGC | 1 cut(s) | 1170 |
| KspI | CCGCGG | 1 cut(s) | 465 |
| Kzo9I | GATC | 6 cut(s) | 41, 639, 1354, 1708, 1740, 1776 |
| LguI | GCTCTTC | 1 cut(s) | 219 |
| LmnI | GCTCC | 9 cut(s) | 626, 733, 1252, 1264, 1510, 1543, 1657, 1684, 1999 |
| Lsp1109I | GCAGC | 8 cut(s) | 187, 193, 1053, 1816, 1914, 1942, 1990, 2011 |
| LweI | GCATC | 5 cut(s) | 176, 1597, 1914, 1956, 1970 |
| MaeI | CTAG | 7 cut(s) | 186, 233, 1352, 1787, 1910, 2124, 2178 |
| MaeII | ACGT | 5 cut(s) | 9, 576, 740, 1449, 1635 |
| MaeIII | GTNAC | 5 cut(s) | 493, 926, 1097, 1207, 2009 |
| MalI | GATC | 6 cut(s) | 43, 641, 1356, 1710, 1742, 1778 |
| MbiI | CCGCTC | 6 cut(s) | 1293, 1369, 1507, 1648, 1660, 2052 |
| MboI | GATC | 6 cut(s) | 41, 639, 1354, 1708, 1740, 1776 |
| MboII | GAAGA | 5 cut(s) | 236, 1021, 1204, 1243, 2054 |
| MflI | RGATCY | 2 cut(s) | 41, 1740 |
| MhlI | GDGCHC | 6 cut(s) | 471, 1046, 1219, 1449, 1515, 1909 |
| MluCI | AATT | 4 cut(s) | 73, 556, 747, 830 |
| Mly113I | GGCGCC | 1 cut(s) | 1941 |
| MlyI | GAGTC | 9 cut(s) | 77, 650, 880, 997, 1006, 1295, 1763, 1856, 2084 |
| MmeI | TCCRAC | 2 cut(s) | 735, 747 |
| MreI | CGCCGGCG | 1 cut(s) | 1168 |
| MroNI | GCCGGC | 1 cut(s) | 1168 |
| MseI | TTAA | 2 cut(s) | 554, 750 |
| MslI | CAYNNNNRTG | 3 cut(s) | 155, 1092, 1268 |
| MspA1I | CMGCKG | 9 cut(s) | 206, 255, 263, 356, 464, 505, 793, 1112, 1750 |
| MvaI | CCWGG | 6 cut(s) | 587, 974, 1478, 1499, 1559, 2031 |
| MvnI | CGCG | 6 cut(s) | 62, 172, 401, 464, 1182, 1221 |
| NaeI | GCCGGC | 1 cut(s) | 1170 |
| NarI | GGCGCC | 1 cut(s) | 1941 |
| NciI | CCSGG | 7 cut(s) | 177, 909, 1025, 1058, 1213, 2138, 2139 |
| NcoI | CCATGG | 2 cut(s) | 945, 1621 |
| NdeII | GATC | 6 cut(s) | 41, 639, 1354, 1708, 1740, 1776 |
| NgoMIV | GCCGGC | 1 cut(s) | 1168 |
| NlaIII | CATG | 7 cut(s) | 949, 985, 1469, 1625, 1696, 1829, 2039 |
| NmeAIII | GCCGAG | 1 cut(s) | 375 |
| NmuCI | GTSAC | 3 cut(s) | 493, 926, 1097 |
| NotI | GCGGCCGC | 1 cut(s) | 1833 |
| NspI | RCATGY | 1 cut(s) | 1696 |
| OliI | CACNNNNGTG | 2 cut(s) | 1092, 1268 |
| PciI | ACATGT | 1 cut(s) | 1692 |
| PciSI | GCTCTTC | 1 cut(s) | 219 |
| PcsI | WCGNNNNNNNCGW | 3 cut(s) | 92, 169, 1286 |
| PdiI | GCCGGC | 1 cut(s) | 1170 |
| PfeI | GAWTC | 4 cut(s) | 35, 824, 977, 1421 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 144, 1950 |
| PfoI | TCCNGGA | 1 cut(s) | 972 |
| PleI | GAGTC | 9 cut(s) | 77, 650, 880, 997, 1006, 1295, 1762, 1855, 2084 |
| PluTI | GGCGCC | 1 cut(s) | 1944 |
| PpsI | GAGTC | 9 cut(s) | 77, 650, 880, 997, 1006, 1295, 1762, 1855, 2084 |
| Ppu21I | YACGTR | 1 cut(s) | 577 |
| PpuMI | RGGWCCY | 1 cut(s) | 1054 |
| PscI | ACATGT | 1 cut(s) | 1692 |
| PshAI | GACNNNNGTC | 3 cut(s) | 844, 1130, 1412 |
| Psp124BI | GAGCTC | 2 cut(s) | 1046, 1515 |
| Psp1406I | AACGTT | 1 cut(s) | 1635 |
| Psp5II | RGGWCCY | 1 cut(s) | 1054 |
| Psp6I | CCWGG | 6 cut(s) | 585, 972, 1476, 1497, 1557, 2029 |
| PspEI | GGTNACC | 1 cut(s) | 1207 |
| PspFI | CCCAGC | 3 cut(s) | 409, 1372, 1546 |
| PspGI | CCWGG | 6 cut(s) | 585, 972, 1476, 1497, 1557, 2029 |
| PspOMI | GGGCCC | 1 cut(s) | 1215 |
| PspPPI | RGGWCCY | 1 cut(s) | 1054 |
| PstI | CTGCAG | 1 cut(s) | 1932 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1498 |
| PsuI | RGATCY | 2 cut(s) | 41, 1740 |
| RsaI | GTAC | 7 cut(s) | 221, 575, 668, 710, 986, 1288, 1871 |
| RsaNI | GTAC | 7 cut(s) | 220, 574, 667, 709, 985, 1287, 1870 |
| RseI | CAYNNNNRTG | 3 cut(s) | 155, 1092, 1268 |
| SacI | GAGCTC | 2 cut(s) | 1046, 1515 |
| SacII | CCGCGG | 1 cut(s) | 465 |
| SalI | GTCGAC | 1 cut(s) | 1405 |
| SapI | GCTCTTC | 1 cut(s) | 219 |
| SaqAI | TTAA | 2 cut(s) | 554, 750 |
| Sau3AI | GATC | 6 cut(s) | 41, 639, 1354, 1708, 1740, 1776 |
| SchI | GAGTC | 9 cut(s) | 77, 650, 880, 997, 1006, 1295, 1763, 1856, 2084 |
| SduI | GDGCHC | 6 cut(s) | 471, 1046, 1219, 1449, 1515, 1909 |
| SfaNI | GCATC | 5 cut(s) | 176, 1597, 1914, 1956, 1970 |
| SfcI | CTRYAG | 2 cut(s) | 131, 1928 |
| SfoI | GGCGCC | 1 cut(s) | 1942 |
| Sfr303I | CCGCGG | 1 cut(s) | 465 |
| SgrAI | CRCCGGYG | 1 cut(s) | 1168 |
| SgrBI | CCGCGG | 1 cut(s) | 465 |
| SinI | GGWCC | 7 cut(s) | 413, 533, 720, 949, 1054, 1125, 1531 |
| SmaI | CCCGGG | 1 cut(s) | 2139 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 155, 1092, 1268 |
| Sse9I | AATT | 4 cut(s) | 73, 556, 747, 830 |
| SspDI | GGCGCC | 1 cut(s) | 1940 |
| SspMI | CTAG | 7 cut(s) | 186, 233, 1352, 1787, 1910, 2124, 2178 |
| SstI | GAGCTC | 2 cut(s) | 1046, 1515 |
| StyI | CCWWGG | 6 cut(s) | 622, 945, 1090, 1621, 1722, 2177 |
| TaaI | ACNGT | 9 cut(s) | 154, 424, 541, 953, 1152, 1282, 1337, 1671, 2153 |
| TaiI | ACGT | 5 cut(s) | 12, 579, 743, 1452, 1638 |
| TaqII | GACCGA | 3 cut(s) | 550, 1392, 1901 |
| TasI | AATT | 4 cut(s) | 73, 556, 747, 830 |
| TatI | WGTACW | 1 cut(s) | 1869 |
| TfiI | GAWTC | 4 cut(s) | 35, 824, 977, 1421 |
| Tru1I | TTAA | 2 cut(s) | 554, 750 |
| Tru9I | TTAA | 2 cut(s) | 554, 750 |
| TscAI | CASTG | 6 cut(s) | 34, 123, 456, 1270, 1887, 2026 |
| TseFI | GTSAC | 3 cut(s) | 493, 926, 1097 |
| TseI | GCWGC | 8 cut(s) | 200, 206, 1066, 1829, 1927, 1930, 1978, 2024 |
| Tsp45I | GTSAC | 3 cut(s) | 493, 926, 1097 |
| TspDTI | ATGAA | 1 cut(s) | 579 |
| TspGWI | ACGGA | 5 cut(s) | 84, 132, 473, 834, 2113 |
| TspMI | CCCGGG | 1 cut(s) | 2137 |
| TspRI | CASTG | 6 cut(s) | 34, 123, 456, 1270, 1887, 2026 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 144, 1950 |
| VneI | GTGCAC | 1 cut(s) | 467 |
| VpaK11BI | GGWCC | 7 cut(s) | 413, 533, 720, 949, 1054, 1125, 1531 |
| XapI | RAATTY | 2 cut(s) | 73, 556 |
| XbaI | TCTAGA | 1 cut(s) | 2123 |
| XceI | RCATGY | 1 cut(s) | 1696 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1088 |
| XmaI | CCCGGG | 1 cut(s) | 2137 |
| XmaJI | CCTAGG | 1 cut(s) | 2177 |
| XmiI | GTMKAC | 2 cut(s) | 1406, 1462 |
| XspI | CTAG | 7 cut(s) | 186, 233, 1352, 1787, 1910, 2124, 2178 |
| ZraI | GACGTC | 1 cut(s) | 10 |