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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 4 cut(s) | 691, 1487, 1523, 1625 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1533 |
| AccBSI | CCGCTC | 5 cut(s) | 299, 952, 1231, 1243, 1794 |
| AccI | GTMKAC | 1 cut(s) | 1580 |
| AccII | CGCG | 6 cut(s) | 339, 433, 697, 726, 826, 1410 |
| AclWI | GGATC | 1 cut(s) | 426 |
| AcoI | YGGCCR | 3 cut(s) | 1215, 1299, 1416 |
| AcsI | RAATTY | 1 cut(s) | 383 |
| AcuI | CTGAAG | 4 cut(s) | 194, 576, 997, 1491 |
| AcyI | GRCGYC | 3 cut(s) | 474, 692, 1067 |
| AfaI | GTAC | 8 cut(s) | 75, 233, 311, 530, 1436, 1454, 1591, 1694 |
| AfeI | AGCGCT | 1 cut(s) | 1396 |
| AflII | CTTAAG | 1 cut(s) | 272 |
| AflIII | ACRYGT | 2 cut(s) | 431, 1275 |
| AgsI | TTSAA | 4 cut(s) | 443, 481, 801, 1322 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 1758 |
| AhlI | ACTAGT | 1 cut(s) | 91 |
| AjnI | CCWGG | 5 cut(s) | 879, 969, 1059, 1609, 1716 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 915, 947 |
| AluBI | AGCT | 4 cut(s) | 160, 610, 1096, 1213 |
| AluI | AGCT | 4 cut(s) | 160, 610, 1096, 1213 |
| Alw21I | GWGCWC | 2 cut(s) | 1092, 1098 |
| Alw26I | GTCTC | 1 cut(s) | 1745 |
| AlwI | GGATC | 1 cut(s) | 426 |
| Ama87I | CYCGRG | 2 cut(s) | 836, 1770 |
| Aor51HI | AGCGCT | 1 cut(s) | 1396 |
| ApoI | RAATTY | 1 cut(s) | 383 |
| AspLEI | GCGC | 9 cut(s) | 108, 154, 550, 694, 712, 726, 750, 1397, 1412 |
| AspS9I | GGNCC | 6 cut(s) | 56, 493, 565, 598, 1114, 1723 |
| AsuC2I | CCSGG | 4 cut(s) | 110, 400, 453, 470 |
| AsuHPI | GGTGA | 7 cut(s) | 134, 653, 932, 932, 999, 1388, 1549 |
| AsuNHI | GCTAGC | 1 cut(s) | 1807 |
| AvaI | CYCGRG | 2 cut(s) | 836, 1770 |
| AvaII | GGWCC | 4 cut(s) | 56, 493, 565, 598 |
| BaeGI | GKGCMC | 2 cut(s) | 872, 1032 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 564, 597 |
| BanI | GGYRCC | 4 cut(s) | 691, 1487, 1523, 1625 |
| BanII | GRGCYC | 3 cut(s) | 590, 832, 1098 |
| BauI | CACGAG | 4 cut(s) | 321, 871, 1091, 1203 |
| Bbv12I | GWGCWC | 2 cut(s) | 1092, 1098 |
| BbvCI | CCTCAGC | 2 cut(s) | 134, 1398 |
| BbvI | GCAGC | 9 cut(s) | 35, 557, 597, 636, 1272, 1342, 1399, 1497, 1525 |
| BccI | CCATC | 2 cut(s) | 1535, 1733 |
| BceAI | ACGGC | 7 cut(s) | 123, 737, 879, 1035, 1202, 1382, 1409 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 9, 43, 1172, 1206 |
| BciT130I | CCWGG | 5 cut(s) | 881, 971, 1061, 1611, 1718 |
| BcnI | CCSGG | 4 cut(s) | 110, 400, 453, 470 |
| BcoDI | GTCTC | 1 cut(s) | 1745 |
| BcuI | ACTAGT | 1 cut(s) | 91 |
| BfaI | CTAG | 3 cut(s) | 92, 1733, 1808 |
| BfmI | CTRYAG | 5 cut(s) | 768, 807, 1118, 1328, 1511 |
| BfoI | RGCGCY | 5 cut(s) | 109, 155, 695, 713, 1398 |
| BfrI | CTTAAG | 1 cut(s) | 272 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 1352 |
| Bme1390I | CCNGG | 9 cut(s) | 110, 400, 453, 470, 881, 971, 1061, 1611, 1718 |
| Bme18I | GGWCC | 4 cut(s) | 56, 493, 565, 598 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 1758 |
| BmeT110I | CYCGRG | 2 cut(s) | 836, 1770 |
| BmgT120I | GGNCC | 6 cut(s) | 56, 493, 565, 598, 1114, 1723 |
| BmrFI | CCNGG | 9 cut(s) | 110, 400, 453, 470, 881, 971, 1061, 1611, 1718 |
| BmrI | ACTGGG | 3 cut(s) | 1543, 1684, 1752 |
| BmsI | GCATC | 5 cut(s) | 357, 1157, 1180, 1539, 1553 |
| BmtI | GCTAGC | 1 cut(s) | 1811 |
| BmuI | ACTGGG | 3 cut(s) | 1543, 1684, 1752 |
| BoxI | GACNNNNGTC | 1 cut(s) | 274 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1655, 1687 |
| BpmI | CTGGAG | 2 cut(s) | 992, 1391 |
| Bpu10I | CCTNAGC | 5 cut(s) | 134, 1097, 1305, 1391, 1398 |
| BpuEI | CTTGAG | 1 cut(s) | 1244 |
| BpuMI | CCSGG | 4 cut(s) | 110, 400, 453, 470 |
| Bsa29I | ATCGAT | 1 cut(s) | 1547 |
| BsaHI | GRCGYC | 3 cut(s) | 474, 692, 1067 |
| BsaI | GGTCTC | 1 cut(s) | 1745 |
| BsaWI | WCCGGW | 1 cut(s) | 306 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 248, 278, 814, 844, 920, 950 |
| Bse118I | RCCGGY | 3 cut(s) | 1385, 1484, 1552 |
| Bse1I | ACTGG | 5 cut(s) | 197, 1538, 1690, 1758, 1815 |
| Bse3DI | GCAATG | 1 cut(s) | 1470 |
| BseBI | CCWGG | 5 cut(s) | 881, 971, 1061, 1611, 1718 |
| BseCI | ATCGAT | 1 cut(s) | 1547 |
| BseGI | GGATG | 1 cut(s) | 1744 |
| BseMI | GCAATG | 1 cut(s) | 1470 |
| BseMII | CTCAG | 6 cut(s) | 148, 575, 1111, 1382, 1389, 1688 |
| BseNI | ACTGG | 5 cut(s) | 197, 1538, 1690, 1758, 1815 |
| BseRI | GAGGAG | 1 cut(s) | 1118 |
| BseSI | GKGCMC | 2 cut(s) | 872, 1032 |
| BseX3I | CGGCCG | 1 cut(s) | 1416 |
| BseXI | GCAGC | 9 cut(s) | 35, 557, 597, 636, 1272, 1342, 1399, 1497, 1525 |
| BseYI | CCCAGC | 2 cut(s) | 751, 1709 |
| BsgI | GTGCAG | 1 cut(s) | 752 |
| Bsh1236I | CGCG | 6 cut(s) | 339, 433, 697, 726, 826, 1410 |
| Bsh1285I | CGRYCG | 2 cut(s) | 1419, 1557 |
| BshNI | GGYRCC | 4 cut(s) | 691, 1487, 1523, 1625 |
| BshVI | ATCGAT | 1 cut(s) | 1547 |
| BsiEI | CGRYCG | 2 cut(s) | 1419, 1557 |
| BsiHKAI | GWGCWC | 2 cut(s) | 1092, 1098 |
| BsiHKCI | CYCGRG | 2 cut(s) | 836, 1770 |
| BslFI | GGGAC | 8 cut(s) | 485, 584, 682, 1139, 1247, 1264, 1687, 1746 |
| BsmAI | GTCTC | 1 cut(s) | 1745 |
| BsmFI | GGGAC | 8 cut(s) | 485, 584, 682, 1139, 1247, 1264, 1687, 1746 |
| Bso31I | GGTCTC | 1 cut(s) | 1745 |
| BsoBI | CYCGRG | 2 cut(s) | 836, 1770 |
| Bsp1286I | GDGCHC | 6 cut(s) | 590, 832, 872, 1032, 1092, 1098 |
| Bsp143I | GATC | 2 cut(s) | 418, 504 |
| Bsp19I | CCATGG | 2 cut(s) | 489, 1491 |
| BspCNI | CTCAG | 6 cut(s) | 147, 576, 1110, 1383, 1390, 1687 |
| BspDI | ATCGAT | 1 cut(s) | 1547 |
| BspFNI | CGCG | 6 cut(s) | 339, 433, 697, 726, 826, 1410 |
| BspMAI | CTGCAG | 3 cut(s) | 811, 1332, 1515 |
| BspOI | GCTAGC | 1 cut(s) | 1811 |
| BspPI | GGATC | 1 cut(s) | 426 |
| BspT107I | GGYRCC | 4 cut(s) | 691, 1487, 1523, 1625 |
| BspTI | CTTAAG | 1 cut(s) | 272 |
| BspTNI | GGTCTC | 1 cut(s) | 1745 |
| BsrBI | CCGCTC | 5 cut(s) | 299, 952, 1231, 1243, 1794 |
| BsrDI | GCAATG | 1 cut(s) | 1470 |
| BsrFI | RCCGGY | 3 cut(s) | 1385, 1484, 1552 |
| BsrI | ACTGG | 5 cut(s) | 197, 1538, 1690, 1758, 1815 |
| BssAI | RCCGGY | 3 cut(s) | 1385, 1484, 1552 |
| BssMI | GATC | 2 cut(s) | 418, 504 |
| BssNI | GRCGYC | 3 cut(s) | 474, 692, 1067 |
| BssSI | CACGAG | 4 cut(s) | 321, 871, 1091, 1203 |
| BssT1I | CCWWGG | 3 cut(s) | 145, 489, 1491 |
| Bst2BI | CACGAG | 4 cut(s) | 321, 871, 1091, 1203 |
| Bst2UI | CCWGG | 5 cut(s) | 881, 971, 1061, 1611, 1718 |
| Bst4CI | ACNGT | 5 cut(s) | 64, 497, 997, 1187, 1254 |
| Bst6I | CTCTTC | 1 cut(s) | 324 |
| BstACI | GRCGYC | 3 cut(s) | 474, 692, 1067 |
| BstAFI | CTTAAG | 1 cut(s) | 272 |
| BstDEI | CTNAG | 8 cut(s) | 134, 517, 584, 1097, 1305, 1391, 1398, 1674 |
| BstDSI | CCRYGG | 6 cut(s) | 63, 216, 489, 695, 1425, 1491 |
| BstF5I | GGATG | 1 cut(s) | 1744 |
| BstFNI | CGCG | 6 cut(s) | 339, 433, 697, 726, 826, 1410 |
| BstH2I | RGCGCY | 5 cut(s) | 109, 155, 695, 713, 1398 |
| BstHHI | GCGC | 9 cut(s) | 108, 154, 550, 694, 712, 726, 750, 1397, 1412 |
| BstKTI | GATC | 2 cut(s) | 421, 507 |
| BstMAI | GTCTC | 1 cut(s) | 1745 |
| BstMBI | GATC | 2 cut(s) | 418, 504 |
| BstMCI | CGRYCG | 2 cut(s) | 1419, 1557 |
| BstNI | CCWGG | 5 cut(s) | 881, 971, 1061, 1611, 1718 |
| BstNSI | RCATGY | 2 cut(s) | 348, 1279 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 274 |
| BstSCI | CCNGG | 9 cut(s) | 108, 398, 451, 468, 879, 969, 1059, 1609, 1716 |
| BstSFI | CTRYAG | 5 cut(s) | 768, 807, 1118, 1328, 1511 |
| BstSLI | GKGCMC | 2 cut(s) | 872, 1032 |
| BstUI | CGCG | 6 cut(s) | 339, 433, 697, 726, 826, 1410 |
| BstV1I | GCAGC | 9 cut(s) | 35, 557, 597, 636, 1272, 1342, 1399, 1497, 1525 |
| BstZI | CGGCCG | 1 cut(s) | 1416 |
| Bsu15I | ATCGAT | 1 cut(s) | 1547 |
| BsuTUI | ATCGAT | 1 cut(s) | 1547 |
| BtgI | CCRYGG | 6 cut(s) | 63, 216, 489, 695, 1425, 1491 |
| BtgZI | GCGATG | 1 cut(s) | 1180 |
| BtsCI | GGATG | 1 cut(s) | 1744 |
| BtsI | GCAGTG | 2 cut(s) | 750, 1602 |
| BtsIMutI | CAGTG | 3 cut(s) | 750, 1602, 1822 |
| CciNI | GCGGCCGC | 1 cut(s) | 1416 |
| CfoI | GCGC | 9 cut(s) | 108, 154, 550, 694, 712, 726, 750, 1397, 1412 |
| Cfr10I | RCCGGY | 3 cut(s) | 1385, 1484, 1552 |
| Cfr13I | GGNCC | 6 cut(s) | 56, 493, 565, 598, 1114, 1723 |
| Cfr42I | CCGCGG | 1 cut(s) | 698 |
| ClaI | ATCGAT | 1 cut(s) | 1547 |
| CseI | GACGC | 4 cut(s) | 439, 482, 1056, 1208 |
| Csp6I | GTAC | 8 cut(s) | 74, 232, 310, 529, 1435, 1453, 1590, 1693 |
| CviAII | CATG | 8 cut(s) | 184, 345, 490, 526, 845, 1049, 1276, 1492 |
| CviQI | GTAC | 8 cut(s) | 74, 232, 310, 529, 1435, 1453, 1590, 1693 |
| DdeI | CTNAG | 8 cut(s) | 134, 517, 584, 1097, 1305, 1391, 1398, 1674 |
| DinI | GGCGCC | 1 cut(s) | 693 |
| DpnI | GATC | 2 cut(s) | 420, 506 |
| DpnII | GATC | 2 cut(s) | 418, 504 |
| DriI | GACNNNNNGTC | 1 cut(s) | 1758 |
| EaeI | YGGCCR | 3 cut(s) | 1215, 1299, 1416 |
| EagI | CGGCCG | 1 cut(s) | 1416 |
| Eam1104I | CTCTTC | 1 cut(s) | 324 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 1758 |
| EarI | CTCTTC | 1 cut(s) | 324 |
| EciI | GGCGGA | 6 cut(s) | 83, 377, 379, 438, 822, 1211 |
| Ecl136II | GAGCTC | 1 cut(s) | 1096 |
| EclXI | CGGCCG | 1 cut(s) | 1416 |
| Eco130I | CCWWGG | 3 cut(s) | 145, 489, 1491 |
| Eco147I | AGGCCT | 1 cut(s) | 805 |
| Eco24I | GRGCYC | 3 cut(s) | 590, 832, 1098 |
| Eco31I | GGTCTC | 1 cut(s) | 1745 |
| Eco47I | GGWCC | 4 cut(s) | 56, 493, 565, 598 |
| Eco47III | AGCGCT | 1 cut(s) | 1396 |
| Eco52I | CGGCCG | 1 cut(s) | 1416 |
| Eco53kI | GAGCTC | 1 cut(s) | 1096 |
| Eco57I | CTGAAG | 4 cut(s) | 194, 576, 997, 1491 |
| Eco88I | CYCGRG | 2 cut(s) | 836, 1770 |
| EcoICRI | GAGCTC | 1 cut(s) | 1096 |
| EcoO109I | RGGNCCY | 2 cut(s) | 56, 598 |
| EcoRI | GAATTC | 1 cut(s) | 383 |
| EcoRII | CCWGG | 5 cut(s) | 879, 969, 1059, 1609, 1716 |
| EcoT14I | CCWWGG | 3 cut(s) | 145, 489, 1491 |
| EcoT22I | ATGCAT | 1 cut(s) | 350 |
| EcoT38I | GRGCYC | 3 cut(s) | 590, 832, 1098 |
| EgeI | GGCGCC | 1 cut(s) | 693 |
| EheI | GGCGCC | 1 cut(s) | 693 |
| ErhI | CCWWGG | 3 cut(s) | 145, 489, 1491 |
| FaeI | CATG | 8 cut(s) | 187, 348, 493, 529, 848, 1052, 1279, 1495 |
| FaqI | GGGAC | 8 cut(s) | 485, 584, 682, 1139, 1247, 1264, 1687, 1746 |
| FatI | CATG | 8 cut(s) | 183, 344, 489, 525, 844, 1048, 1275, 1491 |
| FblI | GTMKAC | 1 cut(s) | 1580 |
| FokI | GGATG | 1 cut(s) | 1751 |
| FriOI | GRGCYC | 3 cut(s) | 590, 832, 1098 |
| FspBI | CTAG | 3 cut(s) | 92, 1733, 1808 |
| GlaI | GCGC | 9 cut(s) | 107, 153, 549, 693, 711, 725, 749, 1396, 1411 |
| GsaI | CCCAGC | 2 cut(s) | 755, 1713 |
| GsuI | CTGGAG | 2 cut(s) | 992, 1391 |
| HaeII | RGCGCY | 5 cut(s) | 109, 155, 695, 713, 1398 |
| HgaI | GACGC | 4 cut(s) | 439, 482, 1056, 1208 |
| HhaI | GCGC | 9 cut(s) | 108, 154, 550, 694, 712, 726, 750, 1397, 1412 |
| Hin1I | GRCGYC | 3 cut(s) | 474, 692, 1067 |
| Hin1II | CATG | 8 cut(s) | 187, 348, 493, 529, 848, 1052, 1279, 1495 |
| Hin6I | GCGC | 9 cut(s) | 106, 152, 548, 692, 710, 724, 748, 1395, 1410 |
| HinP1I | GCGC | 9 cut(s) | 106, 152, 548, 692, 710, 724, 748, 1395, 1410 |
| HincII | GTYRAC | 3 cut(s) | 130, 1000, 1581 |
| HindII | GTYRAC | 3 cut(s) | 130, 1000, 1581 |
| HinfI | GANTC | 8 cut(s) | 179, 319, 367, 884, 1337, 1430, 1670, 1681 |
| HpaI | GTTAAC | 1 cut(s) | 1000 |
| HphI | GGTGA | 7 cut(s) | 134, 653, 932, 932, 999, 1388, 1549 |
| Hpy166II | GTNNAC | 5 cut(s) | 130, 565, 923, 1000, 1581 |
| Hpy188I | TCNGA | 7 cut(s) | 280, 353, 585, 595, 912, 987, 1780 |
| Hpy188III | TCNNGA | 3 cut(s) | 323, 481, 1071 |
| Hpy8I | GTNNAC | 5 cut(s) | 130, 565, 923, 1000, 1581 |
| Hpy99I | CGWCG | 3 cut(s) | 265, 793, 1582 |
| HpyCH4III | ACNGT | 5 cut(s) | 64, 497, 997, 1187, 1254 |
| HpyCH4IV | ACGT | 2 cut(s) | 263, 1032 |
| HpyCH4V | TGCA | 8 cut(s) | 117, 348, 733, 809, 1037, 1048, 1330, 1513 |
| HpyF3I | CTNAG | 8 cut(s) | 134, 517, 584, 1097, 1305, 1391, 1398, 1674 |
| HpySE526I | ACGT | 2 cut(s) | 263, 1032 |
| Hsp92I | GRCGYC | 3 cut(s) | 474, 692, 1067 |
| Hsp92II | CATG | 8 cut(s) | 187, 348, 493, 529, 848, 1052, 1279, 1495 |
| HspAI | GCGC | 9 cut(s) | 106, 152, 548, 692, 710, 724, 748, 1395, 1410 |
| KasI | GGCGCC | 1 cut(s) | 691 |
| KroI | GCCGGC | 1 cut(s) | 1385 |
| KroNI | GCCGGC | 1 cut(s) | 1387 |
| KspAI | GTTAAC | 1 cut(s) | 1000 |
| KspI | CCGCGG | 1 cut(s) | 698 |
| Kzo9I | GATC | 2 cut(s) | 418, 504 |
| LmnI | GCTCC | 8 cut(s) | 149, 256, 781, 835, 1240, 1267, 1404, 1838 |
| Lsp1109I | GCAGC | 9 cut(s) | 35, 557, 597, 636, 1272, 1342, 1399, 1497, 1525 |
| LweI | GCATC | 5 cut(s) | 357, 1157, 1180, 1539, 1553 |
| MaeI | CTAG | 3 cut(s) | 92, 1733, 1808 |
| MaeII | ACGT | 2 cut(s) | 263, 1032 |
| MaeIII | GTNAC | 5 cut(s) | 140, 641, 763, 875, 1474 |
| MalI | GATC | 2 cut(s) | 420, 506 |
| MbiI | CCGCTC | 5 cut(s) | 299, 952, 1231, 1243, 1794 |
| MboI | GATC | 2 cut(s) | 418, 504 |
| MboII | GAAGA | 3 cut(s) | 341, 748, 1579 |
| MfeI | CAATTG | 1 cut(s) | 1038 |
| MhlI | GDGCHC | 6 cut(s) | 590, 832, 872, 1032, 1092, 1098 |
| MluCI | AATT | 3 cut(s) | 383, 511, 1038 |
| MluI | ACGCGT | 1 cut(s) | 431 |
| Mly113I | GGCGCC | 1 cut(s) | 692 |
| MlyI | GAGTC | 6 cut(s) | 313, 878, 1346, 1439, 1664, 1675 |
| MmeI | TCCRAC | 3 cut(s) | 258, 759, 1245 |
| Mph1103I | ATGCAT | 1 cut(s) | 350 |
| MroNI | GCCGGC | 1 cut(s) | 1385 |
| MseI | TTAA | 3 cut(s) | 273, 999, 1172 |
| MslI | CAYNNNNRTG | 2 cut(s) | 636, 849 |
| MspA1I | CMGCKG | 4 cut(s) | 677, 697, 1333, 1678 |
| MspCI | CTTAAG | 1 cut(s) | 272 |
| MspR9I | CCNGG | 9 cut(s) | 110, 400, 453, 470, 881, 971, 1061, 1611, 1718 |
| MunI | CAATTG | 1 cut(s) | 1038 |
| MvaI | CCWGG | 5 cut(s) | 881, 971, 1061, 1611, 1718 |
| MvnI | CGCG | 6 cut(s) | 339, 433, 697, 726, 826, 1410 |
| NaeI | GCCGGC | 1 cut(s) | 1387 |
| NarI | GGCGCC | 1 cut(s) | 692 |
| NciI | CCSGG | 4 cut(s) | 110, 400, 453, 470 |
| NcoI | CCATGG | 2 cut(s) | 489, 1491 |
| NdeII | GATC | 2 cut(s) | 418, 504 |
| NgoMIV | GCCGGC | 1 cut(s) | 1385 |
| NheI | GCTAGC | 1 cut(s) | 1807 |
| NlaIII | CATG | 8 cut(s) | 187, 348, 493, 529, 848, 1052, 1279, 1495 |
| NmeAIII | GCCGAG | 3 cut(s) | 526, 928, 1381 |
| NmuCI | GTSAC | 4 cut(s) | 140, 641, 763, 875 |
| NotI | GCGGCCGC | 1 cut(s) | 1416 |
| NsiI | ATGCAT | 1 cut(s) | 350 |
| NspI | RCATGY | 2 cut(s) | 348, 1279 |
| PaeI | GCATGC | 1 cut(s) | 348 |
| PceI | AGGCCT | 1 cut(s) | 805 |
| PciI | ACATGT | 1 cut(s) | 1275 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 869 |
| PdiI | GCCGGC | 1 cut(s) | 1387 |
| PfeI | GAWTC | 2 cut(s) | 179, 367 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1533 |
| PleI | GAGTC | 6 cut(s) | 313, 878, 1345, 1438, 1664, 1675 |
| PluTI | GGCGCC | 1 cut(s) | 695 |
| PpsI | GAGTC | 6 cut(s) | 313, 878, 1345, 1438, 1664, 1675 |
| PpuMI | RGGWCCY | 2 cut(s) | 56, 598 |
| PscI | ACATGT | 1 cut(s) | 1275 |
| PshAI | GACNNNNGTC | 1 cut(s) | 274 |
| Psp124BI | GAGCTC | 1 cut(s) | 1098 |
| Psp5II | RGGWCCY | 2 cut(s) | 56, 598 |
| Psp6I | CCWGG | 5 cut(s) | 879, 969, 1059, 1609, 1716 |
| PspFI | CCCAGC | 2 cut(s) | 751, 1709 |
| PspGI | CCWGG | 5 cut(s) | 879, 969, 1059, 1609, 1716 |
| PspPI | GGNCC | 6 cut(s) | 56, 493, 565, 598, 1114, 1723 |
| PspPPI | RGGWCCY | 2 cut(s) | 56, 598 |
| PstI | CTGCAG | 3 cut(s) | 811, 1332, 1515 |
| RsaI | GTAC | 8 cut(s) | 75, 233, 311, 530, 1436, 1454, 1591, 1694 |
| RsaNI | GTAC | 8 cut(s) | 74, 232, 310, 529, 1435, 1453, 1590, 1693 |
| RseI | CAYNNNNRTG | 2 cut(s) | 636, 849 |
| SacI | GAGCTC | 1 cut(s) | 1098 |
| SacII | CCGCGG | 1 cut(s) | 698 |
| SalI | GTCGAC | 1 cut(s) | 1579 |
| SaqAI | TTAA | 3 cut(s) | 273, 999, 1172 |
| Sau3AI | GATC | 2 cut(s) | 418, 504 |
| Sau96I | GGNCC | 6 cut(s) | 56, 493, 565, 598, 1114, 1723 |
| SchI | GAGTC | 6 cut(s) | 313, 878, 1346, 1439, 1664, 1675 |
| ScrFI | CCNGG | 9 cut(s) | 110, 400, 453, 470, 881, 971, 1061, 1611, 1718 |
| SduI | GDGCHC | 6 cut(s) | 590, 832, 872, 1032, 1092, 1098 |
| SfaNI | GCATC | 5 cut(s) | 357, 1157, 1180, 1539, 1553 |
| SfcI | CTRYAG | 5 cut(s) | 768, 807, 1118, 1328, 1511 |
| SfoI | GGCGCC | 1 cut(s) | 693 |
| Sfr303I | CCGCGG | 1 cut(s) | 698 |
| SgrBI | CCGCGG | 1 cut(s) | 698 |
| SinI | GGWCC | 4 cut(s) | 56, 493, 565, 598 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 636, 849 |
| SmlI | CTYRAG | 2 cut(s) | 272, 1259 |
| SmoI | CTYRAG | 2 cut(s) | 272, 1259 |
| SpeI | ACTAGT | 1 cut(s) | 91 |
| SphI | GCATGC | 1 cut(s) | 348 |
| Sse9I | AATT | 3 cut(s) | 383, 511, 1038 |
| SseBI | AGGCCT | 1 cut(s) | 805 |
| SspDI | GGCGCC | 1 cut(s) | 691 |
| SspMI | CTAG | 3 cut(s) | 92, 1733, 1808 |
| SstI | GAGCTC | 1 cut(s) | 1098 |
| StuI | AGGCCT | 1 cut(s) | 805 |
| StyD4I | CCNGG | 9 cut(s) | 108, 398, 451, 468, 879, 969, 1059, 1609, 1716 |
| StyI | CCWWGG | 3 cut(s) | 145, 489, 1491 |
| TaaI | ACNGT | 5 cut(s) | 64, 497, 997, 1187, 1254 |
| TaiI | ACGT | 2 cut(s) | 266, 1035 |
| TaqI | TCGA | 7 cut(s) | 295, 507, 1161, 1530, 1547, 1580, 1827 |
| TasI | AATT | 3 cut(s) | 383, 511, 1038 |
| TatI | WGTACW | 1 cut(s) | 1452 |
| TfiI | GAWTC | 2 cut(s) | 179, 367 |
| Tru1I | TTAA | 3 cut(s) | 273, 999, 1172 |
| Tru9I | TTAA | 3 cut(s) | 273, 999, 1172 |
| TscAI | CASTG | 3 cut(s) | 750, 1609, 1822 |
| TseFI | GTSAC | 4 cut(s) | 140, 641, 763, 875 |
| Tsp45I | GTSAC | 4 cut(s) | 140, 641, 763, 875 |
| TspDTI | ATGAA | 2 cut(s) | 930, 1065 |
| TspGWI | ACGGA | 2 cut(s) | 233, 1566 |
| TspRI | CASTG | 3 cut(s) | 750, 1609, 1822 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1533 |
| Vha464I | CTTAAG | 1 cut(s) | 272 |
| VpaK11BI | GGWCC | 4 cut(s) | 56, 493, 565, 598 |
| XapI | RAATTY | 1 cut(s) | 383 |
| XceI | RCATGY | 2 cut(s) | 348, 1279 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 632, 1498 |
| XmiI | GTMKAC | 1 cut(s) | 1580 |
| XspI | CTAG | 3 cut(s) | 92, 1733, 1808 |
| Zsp2I | ATGCAT | 1 cut(s) | 350 |