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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 173 |
| Acc36I | ACCTGC | 2 cut(s) | 173, 678 |
| Acc65I | GGTACC | 1 cut(s) | 164 |
| AccB1I | GGYRCC | 4 cut(s) | 164, 352, 742, 1960 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 417 |
| AccBSI | CCGCTC | 6 cut(s) | 73, 1058, 1237, 1327, 1354, 1492 |
| AccI | GTMKAC | 2 cut(s) | 711, 992 |
| AccII | CGCG | 8 cut(s) | 16, 616, 757, 765, 1225, 1298, 1387, 2190 |
| AclWI | GGATC | 2 cut(s) | 795, 1504 |
| AcoI | YGGCCR | 2 cut(s) | 1623, 1701 |
| AcsI | RAATTY | 4 cut(s) | 366, 402, 547, 1331 |
| AcuI | CTGAAG | 2 cut(s) | 1121, 1821 |
| AcvI | CACGTG | 3 cut(s) | 634, 728, 1607 |
| AcyI | GRCGYC | 4 cut(s) | 743, 768, 1469, 1946 |
| AfaI | GTAC | 7 cut(s) | 166, 230, 312, 1301, 1996, 2104, 2193 |
| AfeI | AGCGCT | 1 cut(s) | 435 |
| AflIII | ACRYGT | 3 cut(s) | 414, 614, 725 |
| AgeI | ACCGGT | 2 cut(s) | 231, 692 |
| AgsI | TTSAA | 6 cut(s) | 220, 737, 1450, 1832, 1840, 2015 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 2154 |
| AhlI | ACTAGT | 1 cut(s) | 1031 |
| AjiI | CACGTC | 1 cut(s) | 1639 |
| AjnI | CCWGG | 5 cut(s) | 1461, 1482, 1512, 1748, 2112 |
| AleI | CACNNNNGTG | 2 cut(s) | 1130, 1347 |
| Alw21I | GWGCWC | 1 cut(s) | 2023 |
| Alw26I | GTCTC | 7 cut(s) | 35, 809, 1187, 1663, 1762, 1974, 2141 |
| AlwI | GGATC | 2 cut(s) | 795, 1504 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 50, 651, 1483 |
| Ama87I | CYCGRG | 4 cut(s) | 1955, 2026, 2127, 2166 |
| Aor51HI | AGCGCT | 1 cut(s) | 435 |
| ApaI | GGGCCC | 2 cut(s) | 1207, 1894 |
| ApoI | RAATTY | 4 cut(s) | 366, 402, 547, 1331 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 152, 184, 1135, 1167 |
| AsiGI | ACCGGT | 2 cut(s) | 231, 692 |
| Asp718I | GGTACC | 1 cut(s) | 164 |
| AspLEI | GCGC | 9 cut(s) | 436, 522, 603, 745, 1006, 1225, 1389, 1814, 1928 |
| AsuC2I | CCSGG | 3 cut(s) | 240, 747, 832 |
| AsuHPI | GGTGA | 7 cut(s) | 682, 868, 910, 1774, 1790, 1951, 2072 |
| AsuNHI | GCTAGC | 1 cut(s) | 76 |
| AvaI | CYCGRG | 4 cut(s) | 1955, 2026, 2127, 2166 |
| AvaII | GGWCC | 3 cut(s) | 560, 1062, 1232 |
| BaeGI | GKGCMC | 3 cut(s) | 357, 1207, 1894 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 156, 189 |
| BalI | TGGCCA | 1 cut(s) | 1625 |
| BanI | GGYRCC | 4 cut(s) | 164, 352, 742, 1960 |
| BanII | GRGCYC | 3 cut(s) | 1026, 1207, 1894 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1987, 2019 |
| BauI | CACGAG | 1 cut(s) | 314 |
| BbrPI | CACGTG | 3 cut(s) | 634, 728, 1607 |
| Bbv12I | GWGCWC | 1 cut(s) | 2023 |
| BccI | CCATC | 2 cut(s) | 104, 2129 |
| BceAI | ACGGC | 8 cut(s) | 185, 191, 293, 716, 756, 955, 1951, 2013 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 755, 789, 1083, 1117 |
| BciT130I | CCWGG | 5 cut(s) | 1463, 1484, 1514, 1750, 2114 |
| BciVI | GTATCC | 1 cut(s) | 1579 |
| BcnI | CCSGG | 3 cut(s) | 240, 747, 832 |
| BcoDI | GTCTC | 7 cut(s) | 35, 809, 1187, 1663, 1762, 1974, 2141 |
| BcuI | ACTAGT | 1 cut(s) | 1031 |
| BfaI | CTAG | 9 cut(s) | 30, 77, 81, 960, 1032, 1110, 1358, 1373, 1895 |
| BfmI | CTRYAG | 4 cut(s) | 529, 999, 1596, 1730 |
| BfoI | RGCGCY | 6 cut(s) | 437, 523, 746, 1007, 1815, 1929 |
| BfuAI | ACCTGC | 2 cut(s) | 173, 678 |
| BfuI | GTATCC | 1 cut(s) | 1579 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 836 |
| BlpI | GCTNAGC | 1 cut(s) | 843 |
| Bme1390I | CCNGG | 8 cut(s) | 240, 747, 832, 1463, 1484, 1514, 1750, 2114 |
| Bme18I | GGWCC | 3 cut(s) | 560, 1062, 1232 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 2154 |
| BmeT110I | CYCGRG | 4 cut(s) | 1955, 2026, 2127, 2166 |
| BmgBI | CACGTC | 1 cut(s) | 1639 |
| BmrFI | CCNGG | 8 cut(s) | 240, 747, 832, 1463, 1484, 1514, 1750, 2114 |
| BmrI | ACTGGG | 2 cut(s) | 1945, 2080 |
| BmsI | GCATC | 6 cut(s) | 276, 290, 925, 1582, 1591, 1899 |
| BmtI | GCTAGC | 1 cut(s) | 80 |
| BmuI | ACTGGG | 2 cut(s) | 1945, 2080 |
| BplI | GAGNNNNNCTC | 6 cut(s) | 327, 359, 2030, 2062, 2032, 2064 |
| BpmI | CTGGAG | 3 cut(s) | 893, 1688, 1709 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 843 |
| BpuEI | CTTGAG | 2 cut(s) | 1223, 1541 |
| BpuMI | CCSGG | 3 cut(s) | 240, 747, 832 |
| Bsa29I | ATCGAT | 2 cut(s) | 284, 1722 |
| BsaAI | YACGTR | 3 cut(s) | 634, 728, 1607 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1724 |
| BsaHI | GRCGYC | 4 cut(s) | 743, 768, 1469, 1946 |
| BsaWI | WCCGGW | 3 cut(s) | 231, 692, 895 |
| BsaXI | ACNNNNNCTCC | 8 cut(s) | 565, 595, 806, 836, 974, 1004, 1643, 1673 |
| Bse118I | RCCGGY | 4 cut(s) | 231, 692, 1090, 1787 |
| Bse1I | ACTGG | 8 cut(s) | 96, 354, 510, 883, 1405, 1776, 1940, 2086 |
| Bse3DI | GCAATG | 1 cut(s) | 1101 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1724 |
| BseBI | CCWGG | 5 cut(s) | 1463, 1484, 1514, 1750, 2114 |
| BseCI | ATCGAT | 2 cut(s) | 284, 1722 |
| BseGI | GGATG | 4 cut(s) | 198, 231, 1189, 2194 |
| BseJI | GATNNNNATC | 1 cut(s) | 1724 |
| BseMI | GCAATG | 1 cut(s) | 1101 |
| BseMII | CTCAG | 6 cut(s) | 12, 857, 1058, 1513, 1784, 1985 |
| BseNI | ACTGG | 8 cut(s) | 96, 354, 510, 883, 1405, 1776, 1940, 2086 |
| BseRI | GAGGAG | 4 cut(s) | 1193, 1520, 1772, 2067 |
| BseSI | GKGCMC | 3 cut(s) | 357, 1207, 1894 |
| BseYI | CCCAGC | 4 cut(s) | 1076, 1886, 1950, 2067 |
| BsgI | GTGCAG | 1 cut(s) | 476 |
| Bsh1236I | CGCG | 8 cut(s) | 16, 616, 757, 765, 1225, 1298, 1387, 2190 |
| BshNI | GGYRCC | 4 cut(s) | 164, 352, 742, 1960 |
| BshTI | ACCGGT | 2 cut(s) | 231, 692 |
| BshVI | ATCGAT | 2 cut(s) | 284, 1722 |
| BsiHKAI | GWGCWC | 1 cut(s) | 2023 |
| BsiHKCI | CYCGRG | 4 cut(s) | 1955, 2026, 2127, 2166 |
| BsiSI | CCGG | 8 cut(s) | 232, 239, 693, 746, 831, 896, 1091, 1788 |
| BsiWI | CGTACG | 1 cut(s) | 1299 |
| BslFI | GGGAC | 7 cut(s) | 1075, 1093, 1649, 1666, 1820, 1933, 2083 |
| BsmAI | GTCTC | 7 cut(s) | 35, 809, 1187, 1663, 1762, 1974, 2141 |
| BsmBI | CGTCTC | 2 cut(s) | 809, 1974 |
| BsmFI | GGGAC | 7 cut(s) | 1075, 1093, 1649, 1666, 1820, 1933, 2083 |
| BsmI | GAATGC | 2 cut(s) | 139, 1835 |
| BsoBI | CYCGRG | 4 cut(s) | 1955, 2026, 2127, 2166 |
| Bsp120I | GGGCCC | 2 cut(s) | 1203, 1890 |
| Bsp1286I | GDGCHC | 5 cut(s) | 357, 1026, 1207, 1894, 2023 |
| Bsp143I | GATC | 4 cut(s) | 787, 798, 1509, 1719 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 843 |
| BspCNI | CTCAG | 6 cut(s) | 13, 856, 1057, 1512, 1785, 1984 |
| BspDI | ATCGAT | 2 cut(s) | 284, 1722 |
| BspFNI | CGCG | 8 cut(s) | 16, 616, 757, 765, 1225, 1298, 1387, 2190 |
| BspHI | TCATGA | 1 cut(s) | 1311 |
| BspMAI | CTGCAG | 4 cut(s) | 533, 1003, 1600, 1734 |
| BspMI | ACCTGC | 2 cut(s) | 173, 678 |
| BspOI | GCTAGC | 1 cut(s) | 80 |
| BspPI | GGATC | 2 cut(s) | 795, 1504 |
| BspT107I | GGYRCC | 4 cut(s) | 164, 352, 742, 1960 |
| BsrBI | CCGCTC | 6 cut(s) | 73, 1058, 1237, 1327, 1354, 1492 |
| BsrDI | GCAATG | 1 cut(s) | 1101 |
| BsrFI | RCCGGY | 4 cut(s) | 231, 692, 1090, 1787 |
| BsrI | ACTGG | 8 cut(s) | 96, 354, 510, 883, 1405, 1776, 1940, 2086 |
| BssAI | RCCGGY | 4 cut(s) | 231, 692, 1090, 1787 |
| BssMI | GATC | 4 cut(s) | 787, 798, 1509, 1719 |
| BssNI | GRCGYC | 4 cut(s) | 743, 768, 1469, 1946 |
| BssSI | CACGAG | 1 cut(s) | 314 |
| BssT1I | CCWWGG | 5 cut(s) | 293, 331, 523, 928, 1707 |
| Bst2BI | CACGAG | 1 cut(s) | 314 |
| Bst2UI | CCWGG | 5 cut(s) | 1463, 1484, 1514, 1750, 2114 |
| Bst4CI | ACNGT | 5 cut(s) | 89, 164, 478, 853, 2107 |
| Bst6I | CTCTTC | 5 cut(s) | 618, 980, 1170, 1760, 1985 |
| BstACI | GRCGYC | 4 cut(s) | 743, 768, 1469, 1946 |
| BstBAI | YACGTR | 3 cut(s) | 634, 728, 1607 |
| BstDEI | CTNAG | 7 cut(s) | 21, 843, 1044, 1473, 1499, 1793, 1971 |
| BstDSI | CCRYGG | 1 cut(s) | 477 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1688 |
| BstF5I | GGATG | 4 cut(s) | 198, 231, 1189, 2194 |
| BstFNI | CGCG | 8 cut(s) | 16, 616, 757, 765, 1225, 1298, 1387, 2190 |
| BstH2I | RGCGCY | 6 cut(s) | 437, 523, 746, 1007, 1815, 1929 |
| BstHHI | GCGC | 9 cut(s) | 436, 522, 603, 745, 1006, 1225, 1389, 1814, 1928 |
| BstKTI | GATC | 4 cut(s) | 790, 801, 1512, 1722 |
| BstMAI | GTCTC | 7 cut(s) | 35, 809, 1187, 1663, 1762, 1974, 2141 |
| BstMBI | GATC | 4 cut(s) | 787, 798, 1509, 1719 |
| BstNI | CCWGG | 5 cut(s) | 1463, 1484, 1514, 1750, 2114 |
| BstNSI | RCATGY | 3 cut(s) | 418, 1681, 1865 |
| BstSCI | CCNGG | 8 cut(s) | 238, 745, 830, 1461, 1482, 1512, 1748, 2112 |
| BstSFI | CTRYAG | 4 cut(s) | 529, 999, 1596, 1730 |
| BstSLI | GKGCMC | 3 cut(s) | 357, 1207, 1894 |
| BstUI | CGCG | 8 cut(s) | 16, 616, 757, 765, 1225, 1298, 1387, 2190 |
| BstX2I | RGATCY | 1 cut(s) | 1509 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 784 |
| BstYI | RGATCY | 1 cut(s) | 1509 |
| Bsu15I | ATCGAT | 2 cut(s) | 284, 1722 |
| BsuI | GTATCC | 1 cut(s) | 1579 |
| BsuTUI | ATCGAT | 2 cut(s) | 284, 1722 |
| BtgI | CCRYGG | 1 cut(s) | 477 |
| BtgZI | GCGATG | 2 cut(s) | 948, 1880 |
| BtrI | CACGTC | 1 cut(s) | 1639 |
| BtsCI | GGATG | 4 cut(s) | 198, 231, 1189, 2194 |
| BtsI | GCAGTG | 2 cut(s) | 973, 1068 |
| BtsIMutI | CAGTG | 4 cut(s) | 94, 103, 973, 1068 |
| BveI | ACCTGC | 2 cut(s) | 173, 678 |
| CaiI | CAGNNNCTG | 3 cut(s) | 50, 651, 1483 |
| CciI | TCATGA | 1 cut(s) | 1311 |
| CfoI | GCGC | 9 cut(s) | 436, 522, 603, 745, 1006, 1225, 1389, 1814, 1928 |
| Cfr10I | RCCGGY | 4 cut(s) | 231, 692, 1090, 1787 |
| ClaI | ATCGAT | 2 cut(s) | 284, 1722 |
| CseI | GACGC | 7 cut(s) | 5, 245, 622, 776, 1136, 1458, 1935 |
| Csp6I | GTAC | 7 cut(s) | 165, 229, 311, 1300, 1995, 2103, 2192 |
| CspAI | ACCGGT | 2 cut(s) | 231, 692 |
| CviAII | CATG | 5 cut(s) | 415, 1312, 1655, 1678, 1862 |
| CviQI | GTAC | 7 cut(s) | 165, 229, 311, 1300, 1995, 2103, 2192 |
| DdeI | CTNAG | 7 cut(s) | 21, 843, 1044, 1473, 1499, 1793, 1971 |
| DinI | GGCGCC | 1 cut(s) | 744 |
| DpnI | GATC | 4 cut(s) | 789, 800, 1511, 1721 |
| DpnII | GATC | 4 cut(s) | 787, 798, 1509, 1719 |
| DriI | GACNNNNNGTC | 1 cut(s) | 2154 |
| EaeI | YGGCCR | 2 cut(s) | 1623, 1701 |
| Eam1104I | CTCTTC | 5 cut(s) | 618, 980, 1170, 1760, 1985 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 2154 |
| EarI | CTCTTC | 5 cut(s) | 618, 980, 1170, 1760, 1985 |
| EciI | GGCGGA | 9 cut(s) | 205, 317, 497, 673, 1153, 1550, 1598, 1865, 2187 |
| Eco130I | CCWWGG | 5 cut(s) | 293, 331, 523, 928, 1707 |
| Eco147I | AGGCCT | 1 cut(s) | 1108 |
| Eco24I | GRGCYC | 3 cut(s) | 1026, 1207, 1894 |
| Eco32I | GATATC | 1 cut(s) | 1726 |
| Eco47I | GGWCC | 3 cut(s) | 560, 1062, 1232 |
| Eco47III | AGCGCT | 1 cut(s) | 435 |
| Eco57I | CTGAAG | 2 cut(s) | 1121, 1821 |
| Eco72I | CACGTG | 3 cut(s) | 634, 728, 1607 |
| Eco88I | CYCGRG | 4 cut(s) | 1955, 2026, 2127, 2166 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1688 |
| EcoO109I | RGGNCCY | 3 cut(s) | 1203, 1890, 1891 |
| EcoRI | GAATTC | 2 cut(s) | 547, 1331 |
| EcoRII | CCWGG | 5 cut(s) | 1461, 1482, 1512, 1748, 2112 |
| EcoRV | GATATC | 1 cut(s) | 1726 |
| EcoT14I | CCWWGG | 5 cut(s) | 293, 331, 523, 928, 1707 |
| EcoT38I | GRGCYC | 3 cut(s) | 1026, 1207, 1894 |
| EgeI | GGCGCC | 1 cut(s) | 744 |
| EheI | GGCGCC | 1 cut(s) | 744 |
| ErhI | CCWWGG | 5 cut(s) | 293, 331, 523, 928, 1707 |
| Esp3I | CGTCTC | 2 cut(s) | 809, 1974 |
| FaeI | CATG | 5 cut(s) | 418, 1315, 1658, 1681, 1865 |
| FaqI | GGGAC | 7 cut(s) | 1075, 1093, 1649, 1666, 1820, 1933, 2083 |
| FatI | CATG | 5 cut(s) | 414, 1311, 1654, 1677, 1861 |
| FblI | GTMKAC | 2 cut(s) | 711, 992 |
| FokI | GGATG | 4 cut(s) | 205, 238, 1196, 2181 |
| FriOI | GRGCYC | 3 cut(s) | 1026, 1207, 1894 |
| FspBI | CTAG | 9 cut(s) | 30, 77, 81, 960, 1032, 1110, 1358, 1373, 1895 |
| GlaI | GCGC | 9 cut(s) | 435, 521, 602, 744, 1005, 1224, 1388, 1813, 1927 |
| GsaI | CCCAGC | 4 cut(s) | 1080, 1890, 1954, 2071 |
| GsuI | CTGGAG | 3 cut(s) | 893, 1688, 1709 |
| HaeII | RGCGCY | 6 cut(s) | 437, 523, 746, 1007, 1815, 1929 |
| HapII | CCGG | 8 cut(s) | 232, 239, 693, 746, 831, 896, 1091, 1788 |
| HgaI | GACGC | 7 cut(s) | 5, 245, 622, 776, 1136, 1458, 1935 |
| HhaI | GCGC | 9 cut(s) | 436, 522, 603, 745, 1006, 1225, 1389, 1814, 1928 |
| Hin1I | GRCGYC | 4 cut(s) | 743, 768, 1469, 1946 |
| Hin1II | CATG | 5 cut(s) | 418, 1315, 1658, 1681, 1865 |
| Hin6I | GCGC | 9 cut(s) | 434, 520, 601, 743, 1004, 1223, 1387, 1812, 1926 |
| HinP1I | GCGC | 9 cut(s) | 434, 520, 601, 743, 1004, 1223, 1387, 1812, 1926 |
| HincII | GTYRAC | 3 cut(s) | 175, 712, 1154 |
| HindII | GTYRAC | 3 cut(s) | 175, 712, 1154 |
| HinfI | GANTC | 9 cut(s) | 140, 637, 859, 1100, 1160, 1286, 1739, 2063, 2074 |
| HpaII | CCGG | 8 cut(s) | 232, 239, 693, 746, 831, 896, 1091, 1788 |
| HphI | GGTGA | 7 cut(s) | 682, 868, 910, 1774, 1790, 1951, 2072 |
| Hpy166II | GTNNAC | 6 cut(s) | 175, 271, 313, 712, 993, 1154 |
| Hpy188I | TCNGA | 7 cut(s) | 160, 647, 864, 889, 1047, 2092, 2176 |
| Hpy188III | TCNNGA | 4 cut(s) | 20, 1312, 1520, 2049 |
| Hpy8I | GTNNAC | 6 cut(s) | 175, 271, 313, 712, 993, 1154 |
| Hpy99I | CGWCG | 8 cut(s) | 164, 206, 268, 582, 770, 953, 1152, 1990 |
| HpyCH4III | ACNGT | 5 cut(s) | 89, 164, 478, 853, 2107 |
| HpyCH4IV | ACGT | 6 cut(s) | 580, 633, 727, 1606, 1638, 1902 |
| HpyCH4V | TGCA | 8 cut(s) | 493, 531, 827, 1001, 1598, 1604, 1618, 1732 |
| HpyF3I | CTNAG | 7 cut(s) | 21, 843, 1044, 1473, 1499, 1793, 1971 |
| HpySE526I | ACGT | 6 cut(s) | 580, 633, 727, 1606, 1638, 1902 |
| Hsp92I | GRCGYC | 4 cut(s) | 743, 768, 1469, 1946 |
| Hsp92II | CATG | 5 cut(s) | 418, 1315, 1658, 1681, 1865 |
| HspAI | GCGC | 9 cut(s) | 434, 520, 601, 743, 1004, 1223, 1387, 1812, 1926 |
| KasI | GGCGCC | 1 cut(s) | 742 |
| KpnI | GGTACC | 1 cut(s) | 168 |
| KroI | GCCGGC | 2 cut(s) | 1090, 1787 |
| KroNI | GCCGGC | 2 cut(s) | 1092, 1789 |
| Kzo9I | GATC | 4 cut(s) | 787, 798, 1509, 1719 |
| LmnI | GCTCC | 5 cut(s) | 573, 1021, 1084, 1249, 1669 |
| LweI | GCATC | 6 cut(s) | 276, 290, 925, 1582, 1591, 1899 |
| MaeI | CTAG | 9 cut(s) | 30, 77, 81, 960, 1032, 1110, 1358, 1373, 1895 |
| MaeII | ACGT | 6 cut(s) | 580, 633, 727, 1606, 1638, 1902 |
| MaeIII | GTNAC | 7 cut(s) | 65, 83, 337, 634, 749, 1430, 2060 |
| MalI | GATC | 4 cut(s) | 789, 800, 1511, 1721 |
| MbiI | CCGCTC | 6 cut(s) | 73, 1058, 1237, 1327, 1354, 1492 |
| MboI | GATC | 4 cut(s) | 787, 798, 1509, 1719 |
| MboII | GAAGA | 8 cut(s) | 632, 635, 997, 1187, 1228, 1777, 2002, 2231 |
| MflI | RGATCY | 1 cut(s) | 1509 |
| MhlI | GDGCHC | 5 cut(s) | 357, 1026, 1207, 1894, 2023 |
| MlsI | TGGCCA | 1 cut(s) | 1625 |
| MluCI | AATT | 6 cut(s) | 366, 402, 547, 805, 1331, 1550 |
| MluI | ACGCGT | 1 cut(s) | 614 |
| MluNI | TGGCCA | 1 cut(s) | 1625 |
| Mly113I | GGCGCC | 1 cut(s) | 743 |
| MlyI | GAGTC | 7 cut(s) | 149, 631, 1109, 1154, 1748, 2057, 2068 |
| MmeI | TCCRAC | 4 cut(s) | 183, 587, 1536, 2183 |
| Mox20I | TGGCCA | 1 cut(s) | 1625 |
| MroNI | GCCGGC | 2 cut(s) | 1090, 1787 |
| MscI | TGGCCA | 1 cut(s) | 1625 |
| MseI | TTAA | 2 cut(s) | 590, 878 |
| MslI | CAYNNNNRTG | 2 cut(s) | 1130, 1347 |
| Msp20I | TGGCCA | 1 cut(s) | 1625 |
| MspA1I | CMGCKG | 6 cut(s) | 50, 1076, 1250, 1633, 1735, 1826 |
| MspI | CCGG | 8 cut(s) | 232, 239, 693, 746, 831, 896, 1091, 1788 |
| MspR9I | CCNGG | 8 cut(s) | 240, 747, 832, 1463, 1484, 1514, 1750, 2114 |
| Mva1269I | GAATGC | 2 cut(s) | 139, 1835 |
| MvaI | CCWGG | 5 cut(s) | 1463, 1484, 1514, 1750, 2114 |
| MvnI | CGCG | 8 cut(s) | 16, 616, 757, 765, 1225, 1298, 1387, 2190 |
| NaeI | GCCGGC | 2 cut(s) | 1092, 1789 |
| NarI | GGCGCC | 1 cut(s) | 743 |
| NciI | CCSGG | 3 cut(s) | 240, 747, 832 |
| NdeII | GATC | 4 cut(s) | 787, 798, 1509, 1719 |
| NgoMIV | GCCGGC | 2 cut(s) | 1090, 1787 |
| NheI | GCTAGC | 1 cut(s) | 76 |
| NlaIII | CATG | 5 cut(s) | 418, 1315, 1658, 1681, 1865 |
| NmeAIII | GCCGAG | 2 cut(s) | 163, 1400 |
| NmuCI | GTSAC | 5 cut(s) | 65, 337, 634, 1430, 2060 |
| NspI | RCATGY | 3 cut(s) | 418, 1681, 1865 |
| OliI | CACNNNNGTG | 2 cut(s) | 1130, 1347 |
| PaeI | GCATGC | 1 cut(s) | 1865 |
| PaeR7I | CTCGAG | 1 cut(s) | 2127 |
| PagI | TCATGA | 1 cut(s) | 1311 |
| PaqCI | CACCTGC | 1 cut(s) | 173 |
| PceI | AGGCCT | 1 cut(s) | 1108 |
| PciI | ACATGT | 1 cut(s) | 414 |
| PcsI | WCGNNNNNNNCGW | 6 cut(s) | 13, 204, 563, 724, 945, 1295 |
| PctI | GAATGC | 2 cut(s) | 139, 1835 |
| PdiI | GCCGGC | 2 cut(s) | 1092, 1789 |
| PfeI | GAWTC | 2 cut(s) | 859, 1286 |
| Pfl23II | CGTACG | 1 cut(s) | 1299 |
| PflFI | GACNNNGTC | 2 cut(s) | 1230, 1655 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 417 |
| PinAI | ACCGGT | 2 cut(s) | 231, 692 |
| PleI | GAGTC | 7 cut(s) | 148, 631, 1108, 1154, 1747, 2057, 2068 |
| PluTI | GGCGCC | 1 cut(s) | 746 |
| PmaCI | CACGTG | 3 cut(s) | 634, 728, 1607 |
| PmlI | CACGTG | 3 cut(s) | 634, 728, 1607 |
| PpsI | GAGTC | 7 cut(s) | 148, 631, 1108, 1154, 1747, 2057, 2068 |
| Ppu21I | YACGTR | 3 cut(s) | 634, 728, 1607 |
| PscI | ACATGT | 1 cut(s) | 414 |
| Psp6I | CCWGG | 5 cut(s) | 1461, 1482, 1512, 1748, 2112 |
| PspCI | CACGTG | 3 cut(s) | 634, 728, 1607 |
| PspFI | CCCAGC | 4 cut(s) | 1076, 1886, 1950, 2067 |
| PspGI | CCWGG | 5 cut(s) | 1461, 1482, 1512, 1748, 2112 |
| PspLI | CGTACG | 1 cut(s) | 1299 |
| PspOMI | GGGCCC | 2 cut(s) | 1203, 1890 |
| PspXI | VCTCGAGB | 1 cut(s) | 2127 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 1292, 1324 |
| PstI | CTGCAG | 4 cut(s) | 533, 1003, 1600, 1734 |
| PstNI | CAGNNNCTG | 3 cut(s) | 50, 651, 1483 |
| PsuI | RGATCY | 1 cut(s) | 1509 |
| PsyI | GACNNNGTC | 2 cut(s) | 1230, 1655 |
| RsaI | GTAC | 7 cut(s) | 166, 230, 312, 1301, 1996, 2104, 2193 |
| RsaNI | GTAC | 7 cut(s) | 165, 229, 311, 1300, 1995, 2103, 2192 |
| RseI | CAYNNNNRTG | 2 cut(s) | 1130, 1347 |
| SalI | GTCGAC | 1 cut(s) | 710 |
| SaqAI | TTAA | 2 cut(s) | 590, 878 |
| Sau3AI | GATC | 4 cut(s) | 787, 798, 1509, 1719 |
| SchI | GAGTC | 7 cut(s) | 149, 631, 1109, 1154, 1748, 2057, 2068 |
| ScrFI | CCNGG | 8 cut(s) | 240, 747, 832, 1463, 1484, 1514, 1750, 2114 |
| SduI | GDGCHC | 5 cut(s) | 357, 1026, 1207, 1894, 2023 |
| SfaNI | GCATC | 6 cut(s) | 276, 290, 925, 1582, 1591, 1899 |
| SfcI | CTRYAG | 4 cut(s) | 529, 999, 1596, 1730 |
| SfoI | GGCGCC | 1 cut(s) | 744 |
| Sfr274I | CTCGAG | 1 cut(s) | 2127 |
| SinI | GGWCC | 3 cut(s) | 560, 1062, 1232 |
| SlaI | CTCGAG | 1 cut(s) | 2127 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 1130, 1347 |
| SmlI | CTYRAG | 3 cut(s) | 1238, 1520, 2127 |
| SmoI | CTYRAG | 3 cut(s) | 1238, 1520, 2127 |
| SpeI | ACTAGT | 1 cut(s) | 1031 |
| SphI | GCATGC | 1 cut(s) | 1865 |
| Sse9I | AATT | 6 cut(s) | 366, 402, 547, 805, 1331, 1550 |
| SseBI | AGGCCT | 1 cut(s) | 1108 |
| SspDI | GGCGCC | 1 cut(s) | 742 |
| SspMI | CTAG | 9 cut(s) | 30, 77, 81, 960, 1032, 1110, 1358, 1373, 1895 |
| StuI | AGGCCT | 1 cut(s) | 1108 |
| StyD4I | CCNGG | 8 cut(s) | 238, 745, 830, 1461, 1482, 1512, 1748, 2112 |
| StyI | CCWWGG | 5 cut(s) | 293, 331, 523, 928, 1707 |
| TaaI | ACNGT | 5 cut(s) | 89, 164, 478, 853, 2107 |
| TaiI | ACGT | 6 cut(s) | 583, 636, 730, 1609, 1641, 1905 |
| TaqI | TCGA | 8 cut(s) | 284, 711, 801, 1103, 1254, 1722, 2050, 2128 |
| TaqII | GACCGA | 1 cut(s) | 1418 |
| TasI | AATT | 6 cut(s) | 366, 402, 547, 805, 1331, 1550 |
| TfiI | GAWTC | 2 cut(s) | 859, 1286 |
| Tru1I | TTAA | 2 cut(s) | 590, 878 |
| Tru9I | TTAA | 2 cut(s) | 590, 878 |
| TscAI | CASTG | 4 cut(s) | 94, 103, 973, 1075 |
| TseFI | GTSAC | 5 cut(s) | 65, 337, 634, 1430, 2060 |
| Tsp45I | GTSAC | 5 cut(s) | 65, 337, 634, 1430, 2060 |
| TspDTI | ATGAA | 3 cut(s) | 209, 1300, 1883 |
| TspGWI | ACGGA | 2 cut(s) | 252, 1097 |
| TspRI | CASTG | 4 cut(s) | 94, 103, 973, 1075 |
| Tth111I | GACNNNGTC | 2 cut(s) | 1230, 1655 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 417 |
| VpaK11BI | GGWCC | 3 cut(s) | 560, 1062, 1232 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1688 |
| XapI | RAATTY | 4 cut(s) | 366, 402, 547, 1331 |
| XceI | RCATGY | 3 cut(s) | 418, 1681, 1865 |
| XhoI | CTCGAG | 1 cut(s) | 2127 |
| XmiI | GTMKAC | 2 cut(s) | 711, 992 |
| XspI | CTAG | 9 cut(s) | 30, 77, 81, 960, 1032, 1110, 1358, 1373, 1895 |