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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 1 cut(s) | 1415 |
| AccB1I | GGYRCC | 4 cut(s) | 394, 1163, 1292, 1415 |
| AccBSI | CCGCTC | 5 cut(s) | 907, 919, 1299, 1409, 1442 |
| AccI | GTMKAC | 2 cut(s) | 285, 549 |
| AccII | CGCG | 3 cut(s) | 563, 1262, 1446 |
| AclWI | GGATC | 4 cut(s) | 536, 975, 994, 1220 |
| AcoI | YGGCCR | 3 cut(s) | 432, 697, 849 |
| AcsI | RAATTY | 1 cut(s) | 98 |
| AcuI | CTGAAG | 2 cut(s) | 674, 989 |
| AcyI | GRCGYC | 2 cut(s) | 743, 844 |
| AfaI | GTAC | 5 cut(s) | 50, 220, 251, 516, 1417 |
| AfiI | CCNNNNNNNGG | 8 cut(s) | 14, 15, 316, 459, 799, 963, 1009, 1446 |
| AgsI | TTSAA | 1 cut(s) | 1189 |
| AjnI | CCWGG | 7 cut(s) | 8, 237, 736, 846, 912, 1022, 1065 |
| AluBI | AGCT | 9 cut(s) | 142, 694, 772, 805, 940, 1009, 1016, 1045, 1073 |
| AluI | AGCT | 9 cut(s) | 142, 694, 772, 805, 940, 1009, 1016, 1045, 1073 |
| Alw21I | GWGCWC | 1 cut(s) | 774 |
| Alw26I | GTCTC | 3 cut(s) | 569, 937, 1378 |
| AlwI | GGATC | 4 cut(s) | 536, 975, 994, 1220 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 298 |
| Ama87I | CYCGRG | 2 cut(s) | 1300, 1404 |
| ApeKI | GCWGC | 7 cut(s) | 331, 469, 494, 529, 722, 961, 1016 |
| ApoI | RAATTY | 1 cut(s) | 98 |
| Asp718I | GGTACC | 1 cut(s) | 1415 |
| AspLEI | GCGC | 2 cut(s) | 304, 1202 |
| AsuC2I | CCSGG | 1 cut(s) | 758 |
| AsuHPI | GGTGA | 2 cut(s) | 363, 1048 |
| AvaI | CYCGRG | 2 cut(s) | 1300, 1404 |
| AvaII | GGWCC | 6 cut(s) | 18, 214, 443, 586, 910, 1026 |
| BaeGI | GKGCMC | 1 cut(s) | 1297 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1407, 1440 |
| BalI | TGGCCA | 1 cut(s) | 851 |
| BanI | GGYRCC | 4 cut(s) | 394, 1163, 1292, 1415 |
| BanII | GRGCYC | 3 cut(s) | 311, 774, 1436 |
| BauI | CACGAG | 1 cut(s) | 191 |
| Bbv12I | GWGCWC | 1 cut(s) | 774 |
| BbvCI | CCTCAGC | 2 cut(s) | 1032, 1074 |
| BbvI | GCAGC | 7 cut(s) | 318, 481, 481, 541, 709, 948, 1003 |
| BccI | CCATC | 6 cut(s) | 32, 319, 359, 597, 625, 1246 |
| BceAI | ACGGC | 1 cut(s) | 684 |
| BciT130I | CCWGG | 7 cut(s) | 10, 239, 738, 848, 914, 1024, 1067 |
| BcnI | CCSGG | 1 cut(s) | 758 |
| BcoDI | GTCTC | 3 cut(s) | 569, 937, 1378 |
| BfaI | CTAG | 3 cut(s) | 113, 263, 941 |
| BfoI | RGCGCY | 2 cut(s) | 305, 1203 |
| BglI | GCCNNNNNGGC | 2 cut(s) | 649, 1234 |
| BglII | AGATCT | 1 cut(s) | 115 |
| BlpI | GCTNAGC | 1 cut(s) | 305 |
| Bme1390I | CCNGG | 8 cut(s) | 10, 239, 738, 758, 848, 914, 1024, 1067 |
| Bme18I | GGWCC | 6 cut(s) | 18, 214, 443, 586, 910, 1026 |
| BmeT110I | CYCGRG | 2 cut(s) | 1300, 1404 |
| BmrFI | CCNGG | 8 cut(s) | 10, 239, 738, 758, 848, 914, 1024, 1067 |
| BmsI | GCATC | 4 cut(s) | 352, 613, 1229, 1333 |
| BoxI | GACNNNNGTC | 1 cut(s) | 281 |
| BpmI | CTGGAG | 5 cut(s) | 260, 485, 827, 935, 1067 |
| Bpu10I | CCTNAGC | 4 cut(s) | 773, 981, 1032, 1074 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 305 |
| BpuMI | CCSGG | 1 cut(s) | 758 |
| BsaHI | GRCGYC | 2 cut(s) | 743, 844 |
| BsaI | GGTCTC | 2 cut(s) | 569, 1378 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 233, 263, 653, 683, 917, 947 |
| Bsc4I | CCNNNNNNNGG | 8 cut(s) | 14, 15, 316, 459, 799, 963, 1009, 1446 |
| Bse118I | RCCGGY | 2 cut(s) | 131, 1160 |
| Bse1I | ACTGG | 5 cut(s) | 303, 446, 545, 831, 1277 |
| Bse3DI | GCAATG | 1 cut(s) | 453 |
| BseBI | CCWGG | 7 cut(s) | 10, 239, 738, 848, 914, 1024, 1067 |
| BseGI | GGATG | 7 cut(s) | 562, 571, 628, 838, 880, 1220, 1273 |
| BseLI | CCNNNNNNNGG | 8 cut(s) | 14, 15, 316, 459, 799, 963, 1009, 1446 |
| BseMI | GCAATG | 1 cut(s) | 453 |
| BseMII | CTCAG | 9 cut(s) | 296, 305, 306, 521, 787, 1023, 1065, 1355, 1376 |
| BseNI | ACTGG | 5 cut(s) | 303, 446, 545, 831, 1277 |
| BseRI | GAGGAG | 3 cut(s) | 209, 794, 824 |
| BseSI | GKGCMC | 1 cut(s) | 1297 |
| BseX3I | CGGCCG | 2 cut(s) | 432, 697 |
| BseXI | GCAGC | 7 cut(s) | 318, 481, 481, 541, 709, 948, 1003 |
| BseYI | CCCAGC | 3 cut(s) | 638, 1224, 1232 |
| BsgI | GTGCAG | 2 cut(s) | 401, 708 |
| Bsh1236I | CGCG | 3 cut(s) | 563, 1262, 1446 |
| Bsh1285I | CGRYCG | 3 cut(s) | 435, 700, 1095 |
| BshNI | GGYRCC | 4 cut(s) | 394, 1163, 1292, 1415 |
| BsiEI | CGRYCG | 3 cut(s) | 435, 700, 1095 |
| BsiHKAI | GWGCWC | 1 cut(s) | 774 |
| BsiHKCI | CYCGRG | 2 cut(s) | 1300, 1404 |
| BsiSI | CCGG | 3 cut(s) | 132, 758, 1161 |
| BslFI | GGGAC | 2 cut(s) | 31, 923 |
| BslI | CCNNNNNNNGG | 8 cut(s) | 14, 15, 316, 459, 799, 963, 1009, 1446 |
| BsmAI | GTCTC | 3 cut(s) | 569, 937, 1378 |
| BsmFI | GGGAC | 2 cut(s) | 31, 923 |
| Bso31I | GGTCTC | 2 cut(s) | 569, 1378 |
| BsoBI | CYCGRG | 2 cut(s) | 1300, 1404 |
| Bsp1286I | GDGCHC | 4 cut(s) | 311, 774, 1297, 1436 |
| Bsp143I | GATC | 9 cut(s) | 115, 151, 225, 541, 783, 967, 999, 1212, 1453 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 305 |
| Bsp19I | CCATGG | 1 cut(s) | 210 |
| BspCNI | CTCAG | 9 cut(s) | 297, 304, 307, 520, 786, 1024, 1066, 1354, 1375 |
| BspFNI | CGCG | 3 cut(s) | 563, 1262, 1446 |
| BspPI | GGATC | 4 cut(s) | 536, 975, 994, 1220 |
| BspT107I | GGYRCC | 4 cut(s) | 394, 1163, 1292, 1415 |
| BspTNI | GGTCTC | 2 cut(s) | 569, 1378 |
| BsrBI | CCGCTC | 5 cut(s) | 907, 919, 1299, 1409, 1442 |
| BsrDI | GCAATG | 1 cut(s) | 453 |
| BsrFI | RCCGGY | 2 cut(s) | 131, 1160 |
| BsrI | ACTGG | 5 cut(s) | 303, 446, 545, 831, 1277 |
| BssAI | RCCGGY | 2 cut(s) | 131, 1160 |
| BssMI | GATC | 9 cut(s) | 115, 151, 225, 541, 783, 967, 999, 1212, 1453 |
| BssNI | GRCGYC | 2 cut(s) | 743, 844 |
| BssSI | CACGAG | 1 cut(s) | 191 |
| BssT1I | CCWWGG | 2 cut(s) | 210, 816 |
| Bst2BI | CACGAG | 1 cut(s) | 191 |
| Bst2UI | CCWGG | 7 cut(s) | 10, 239, 738, 848, 914, 1024, 1067 |
| Bst4CI | ACNGT | 6 cut(s) | 218, 283, 881, 1102, 1185, 1415 |
| BstACI | GRCGYC | 2 cut(s) | 743, 844 |
| BstDSI | CCRYGG | 5 cut(s) | 210, 324, 375, 796, 880 |
| BstF5I | GGATG | 7 cut(s) | 562, 571, 628, 838, 880, 1220, 1273 |
| BstFNI | CGCG | 3 cut(s) | 563, 1262, 1446 |
| BstH2I | RGCGCY | 2 cut(s) | 305, 1203 |
| BstHHI | GCGC | 2 cut(s) | 304, 1202 |
| BstKTI | GATC | 9 cut(s) | 118, 154, 228, 544, 786, 970, 1002, 1215, 1456 |
| BstMAI | GTCTC | 3 cut(s) | 569, 937, 1378 |
| BstMBI | GATC | 9 cut(s) | 115, 151, 225, 541, 783, 967, 999, 1212, 1453 |
| BstMCI | CGRYCG | 3 cut(s) | 435, 700, 1095 |
| BstNI | CCWGG | 7 cut(s) | 10, 239, 738, 848, 914, 1024, 1067 |
| BstNSI | RCATGY | 2 cut(s) | 250, 1088 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 281 |
| BstSCI | CCNGG | 8 cut(s) | 8, 237, 736, 756, 846, 912, 1022, 1065 |
| BstSLI | GKGCMC | 1 cut(s) | 1297 |
| BstUI | CGCG | 3 cut(s) | 563, 1262, 1446 |
| BstV1I | GCAGC | 7 cut(s) | 318, 481, 481, 541, 709, 948, 1003 |
| BstX2I | RGATCY | 2 cut(s) | 115, 999 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1232 |
| BstYI | RGATCY | 2 cut(s) | 115, 999 |
| BstZI | CGGCCG | 2 cut(s) | 432, 697 |
| BtgI | CCRYGG | 5 cut(s) | 210, 324, 375, 796, 880 |
| BtsCI | GGATG | 7 cut(s) | 562, 571, 628, 838, 880, 1220, 1273 |
| BtsIMutI | CAGTG | 4 cut(s) | 296, 453, 636, 1098 |
| CaiI | CAGNNNCTG | 1 cut(s) | 298 |
| CciNI | GCGGCCGC | 1 cut(s) | 432 |
| CfoI | GCGC | 2 cut(s) | 304, 1202 |
| Cfr10I | RCCGGY | 2 cut(s) | 131, 1160 |
| CseI | GACGC | 5 cut(s) | 172, 569, 615, 732, 852 |
| Csp6I | GTAC | 5 cut(s) | 49, 219, 250, 515, 1416 |
| CviAII | CATG | 4 cut(s) | 211, 247, 1085, 1141 |
| CviQI | GTAC | 5 cut(s) | 49, 219, 250, 515, 1416 |
| DpnI | GATC | 9 cut(s) | 117, 153, 227, 543, 785, 969, 1001, 1214, 1455 |
| DpnII | GATC | 9 cut(s) | 115, 151, 225, 541, 783, 967, 999, 1212, 1453 |
| EaeI | YGGCCR | 3 cut(s) | 432, 697, 849 |
| EagI | CGGCCG | 2 cut(s) | 432, 697 |
| EciI | GGCGGA | 3 cut(s) | 110, 845, 1346 |
| Ecl136II | GAGCTC | 1 cut(s) | 772 |
| EclXI | CGGCCG | 2 cut(s) | 432, 697 |
| Eco130I | CCWWGG | 2 cut(s) | 210, 816 |
| Eco24I | GRGCYC | 3 cut(s) | 311, 774, 1436 |
| Eco31I | GGTCTC | 2 cut(s) | 569, 1378 |
| Eco47I | GGWCC | 6 cut(s) | 18, 214, 443, 586, 910, 1026 |
| Eco52I | CGGCCG | 2 cut(s) | 432, 697 |
| Eco53kI | GAGCTC | 1 cut(s) | 772 |
| Eco57I | CTGAAG | 2 cut(s) | 674, 989 |
| Eco88I | CYCGRG | 2 cut(s) | 1300, 1404 |
| EcoICRI | GAGCTC | 1 cut(s) | 772 |
| EcoO109I | RGGNCCY | 4 cut(s) | 18, 613, 790, 910 |
| EcoRI | GAATTC | 1 cut(s) | 98 |
| EcoRII | CCWGG | 7 cut(s) | 8, 237, 736, 846, 912, 1022, 1065 |
| EcoT14I | CCWWGG | 2 cut(s) | 210, 816 |
| EcoT22I | ATGCAT | 1 cut(s) | 1326 |
| EcoT38I | GRGCYC | 3 cut(s) | 311, 774, 1436 |
| ErhI | CCWWGG | 2 cut(s) | 210, 816 |
| FaeI | CATG | 4 cut(s) | 214, 250, 1088, 1144 |
| FaiI | YATR | 8 cut(s) | 212, 248, 953, 1086, 1142, 1169, 1205, 1322 |
| FaqI | GGGAC | 2 cut(s) | 31, 923 |
| FatI | CATG | 4 cut(s) | 210, 246, 1084, 1140 |
| FauI | CCCGC | 9 cut(s) | 6, 451, 900, 957, 1237, 1267, 1304, 1359, 1439 |
| FblI | GTMKAC | 2 cut(s) | 285, 549 |
| FokI | GGATG | 7 cut(s) | 569, 578, 635, 845, 887, 1207, 1280 |
| FriOI | GRGCYC | 3 cut(s) | 311, 774, 1436 |
| FspBI | CTAG | 3 cut(s) | 113, 263, 941 |
| GlaI | GCGC | 2 cut(s) | 303, 1201 |
| GsaI | CCCAGC | 3 cut(s) | 642, 1228, 1236 |
| GsuI | CTGGAG | 5 cut(s) | 260, 485, 827, 935, 1067 |
| HaeII | RGCGCY | 2 cut(s) | 305, 1203 |
| HapII | CCGG | 3 cut(s) | 132, 758, 1161 |
| HgaI | GACGC | 5 cut(s) | 172, 569, 615, 732, 852 |
| HhaI | GCGC | 2 cut(s) | 304, 1202 |
| Hin1I | GRCGYC | 2 cut(s) | 743, 844 |
| Hin1II | CATG | 4 cut(s) | 214, 250, 1088, 1144 |
| Hin6I | GCGC | 2 cut(s) | 302, 1200 |
| HinP1I | GCGC | 2 cut(s) | 302, 1200 |
| HincII | GTYRAC | 2 cut(s) | 286, 550 |
| HindII | GTYRAC | 2 cut(s) | 286, 550 |
| HinfI | GANTC | 4 cut(s) | 505, 668, 1189, 1337 |
| HpaII | CCGG | 3 cut(s) | 132, 758, 1161 |
| HphI | GGTGA | 2 cut(s) | 363, 1048 |
| Hpy166II | GTNNAC | 4 cut(s) | 286, 517, 550, 677 |
| Hpy188I | TCNGA | 8 cut(s) | 97, 294, 316, 597, 622, 1194, 1369, 1458 |
| Hpy188III | TCNNGA | 3 cut(s) | 85, 356, 1404 |
| Hpy8I | GTNNAC | 4 cut(s) | 286, 517, 550, 677 |
| Hpy99I | CGWCG | 6 cut(s) | 287, 554, 658, 748, 846, 902 |
| HpyAV | CCTTC | 6 cut(s) | 31, 595, 698, 1013, 1129, 1150 |
| HpyCH4III | ACNGT | 6 cut(s) | 218, 283, 881, 1102, 1185, 1415 |
| HpyCH4V | TGCA | 4 cut(s) | 382, 725, 1253, 1324 |
| Hsp92I | GRCGYC | 2 cut(s) | 743, 844 |
| Hsp92II | CATG | 4 cut(s) | 214, 250, 1088, 1144 |
| HspAI | GCGC | 2 cut(s) | 302, 1200 |
| KpnI | GGTACC | 1 cut(s) | 1419 |
| Kzo9I | GATC | 9 cut(s) | 115, 151, 225, 541, 783, 967, 999, 1212, 1453 |
| LmnI | GCTCC | 7 cut(s) | 73, 466, 489, 802, 838, 916, 1070 |
| Lsp1109I | GCAGC | 7 cut(s) | 318, 481, 481, 541, 709, 948, 1003 |
| LweI | GCATC | 4 cut(s) | 352, 613, 1229, 1333 |
| MaeI | CTAG | 3 cut(s) | 113, 263, 941 |
| MaeIII | GTNAC | 5 cut(s) | 3, 448, 502, 631, 1423 |
| MalI | GATC | 9 cut(s) | 117, 153, 227, 543, 785, 969, 1001, 1214, 1455 |
| MbiI | CCGCTC | 5 cut(s) | 907, 919, 1299, 1409, 1442 |
| MboI | GATC | 9 cut(s) | 115, 151, 225, 541, 783, 967, 999, 1212, 1453 |
| MboII | GAAGA | 2 cut(s) | 610, 1051 |
| MfeI | CAATTG | 1 cut(s) | 158 |
| MflI | RGATCY | 2 cut(s) | 115, 999 |
| MhlI | GDGCHC | 4 cut(s) | 311, 774, 1297, 1436 |
| MlsI | TGGCCA | 1 cut(s) | 851 |
| MluCI | AATT | 4 cut(s) | 98, 158, 729, 887 |
| MluNI | TGGCCA | 1 cut(s) | 851 |
| MlyI | GAGTC | 2 cut(s) | 499, 662 |
| MmeI | TCCRAC | 3 cut(s) | 75, 127, 683 |
| Mox20I | TGGCCA | 1 cut(s) | 851 |
| Mph1103I | ATGCAT | 1 cut(s) | 1326 |
| MscI | TGGCCA | 1 cut(s) | 851 |
| MseI | TTAA | 2 cut(s) | 90, 1113 |
| Msp20I | TGGCCA | 1 cut(s) | 851 |
| MspA1I | CMGCKG | 5 cut(s) | 638, 1009, 1031, 1124, 1232 |
| MspI | CCGG | 3 cut(s) | 132, 758, 1161 |
| MspR9I | CCNGG | 8 cut(s) | 10, 239, 738, 758, 848, 914, 1024, 1067 |
| MunI | CAATTG | 1 cut(s) | 158 |
| MvaI | CCWGG | 7 cut(s) | 10, 239, 738, 848, 914, 1024, 1067 |
| MvnI | CGCG | 3 cut(s) | 563, 1262, 1446 |
| NciI | CCSGG | 1 cut(s) | 758 |
| NcoI | CCATGG | 1 cut(s) | 210 |
| NdeII | GATC | 9 cut(s) | 115, 151, 225, 541, 783, 967, 999, 1212, 1453 |
| NlaIII | CATG | 4 cut(s) | 214, 250, 1088, 1144 |
| NmeAIII | GCCGAG | 2 cut(s) | 675, 1455 |
| NmuCI | GTSAC | 4 cut(s) | 3, 448, 502, 631 |
| NotI | GCGGCCGC | 1 cut(s) | 432 |
| NsiI | ATGCAT | 1 cut(s) | 1326 |
| NspI | RCATGY | 2 cut(s) | 250, 1088 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 198, 546 |
| PfeI | GAWTC | 2 cut(s) | 1189, 1337 |
| PflFI | GACNNNGTC | 1 cut(s) | 929 |
| PfoI | TCCNGGA | 1 cut(s) | 237 |
| PleI | GAGTC | 2 cut(s) | 499, 662 |
| PpsI | GAGTC | 2 cut(s) | 499, 662 |
| PpuMI | RGGWCCY | 2 cut(s) | 18, 910 |
| PshAI | GACNNNNGTC | 1 cut(s) | 281 |
| Psp124BI | GAGCTC | 1 cut(s) | 774 |
| Psp5II | RGGWCCY | 2 cut(s) | 18, 910 |
| Psp6I | CCWGG | 7 cut(s) | 8, 237, 736, 846, 912, 1022, 1065 |
| PspFI | CCCAGC | 3 cut(s) | 638, 1224, 1232 |
| PspGI | CCWGG | 7 cut(s) | 8, 237, 736, 846, 912, 1022, 1065 |
| PspPPI | RGGWCCY | 2 cut(s) | 18, 910 |
| PstNI | CAGNNNCTG | 1 cut(s) | 298 |
| PsuI | RGATCY | 2 cut(s) | 115, 999 |
| PsyI | GACNNNGTC | 1 cut(s) | 929 |
| PvuII | CAGCTG | 1 cut(s) | 1009 |
| RsaI | GTAC | 5 cut(s) | 50, 220, 251, 516, 1417 |
| RsaNI | GTAC | 5 cut(s) | 49, 219, 250, 515, 1416 |
| SacI | GAGCTC | 1 cut(s) | 774 |
| SalI | GTCGAC | 2 cut(s) | 284, 548 |
| SaqAI | TTAA | 2 cut(s) | 90, 1113 |
| Sau3AI | GATC | 9 cut(s) | 115, 151, 225, 541, 783, 967, 999, 1212, 1453 |
| SchI | GAGTC | 2 cut(s) | 499, 662 |
| ScrFI | CCNGG | 8 cut(s) | 10, 239, 738, 758, 848, 914, 1024, 1067 |
| SduI | GDGCHC | 4 cut(s) | 311, 774, 1297, 1436 |
| SfaNI | GCATC | 4 cut(s) | 352, 613, 1229, 1333 |
| SfiI | GGCCNNNNNGGCC | 1 cut(s) | 649 |
| SinI | GGWCC | 6 cut(s) | 18, 214, 443, 586, 910, 1026 |
| Sse9I | AATT | 4 cut(s) | 98, 158, 729, 887 |
| SspMI | CTAG | 3 cut(s) | 113, 263, 941 |
| SstI | GAGCTC | 1 cut(s) | 774 |
| StyD4I | CCNGG | 8 cut(s) | 8, 237, 736, 756, 846, 912, 1022, 1065 |
| StyI | CCWWGG | 2 cut(s) | 210, 816 |
| TaaI | ACNGT | 6 cut(s) | 218, 283, 881, 1102, 1185, 1415 |
| TaqI | TCGA | 8 cut(s) | 62, 150, 201, 285, 357, 549, 666, 1452 |
| TaqII | GACCGA | 1 cut(s) | 1160 |
| TasI | AATT | 4 cut(s) | 98, 158, 729, 887 |
| TauI | GCSGC | 8 cut(s) | 431, 434, 437, 980, 1022, 1091, 1154, 1311 |
| TfiI | GAWTC | 2 cut(s) | 1189, 1337 |
| Tru1I | TTAA | 2 cut(s) | 90, 1113 |
| Tru9I | TTAA | 2 cut(s) | 90, 1113 |
| TscAI | CASTG | 4 cut(s) | 303, 453, 636, 1105 |
| TseFI | GTSAC | 4 cut(s) | 3, 448, 502, 631 |
| TseI | GCWGC | 7 cut(s) | 331, 469, 494, 529, 722, 961, 1016 |
| Tsp45I | GTSAC | 4 cut(s) | 3, 448, 502, 631 |
| TspRI | CASTG | 4 cut(s) | 303, 453, 636, 1105 |
| Tth111I | GACNNNGTC | 1 cut(s) | 929 |
| VpaK11BI | GGWCC | 6 cut(s) | 18, 214, 443, 586, 910, 1026 |
| XapI | RAATTY | 1 cut(s) | 98 |
| XceI | RCATGY | 2 cut(s) | 250, 1088 |
| XcmI | CCANNNNNNNNNTGG | 4 cut(s) | 40, 460, 823, 1174 |
| XmiI | GTMKAC | 2 cut(s) | 285, 549 |
| XspI | CTAG | 3 cut(s) | 113, 263, 941 |
| Zsp2I | ATGCAT | 1 cut(s) | 1326 |