Cytosolic purine
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 1717 |
| Acc36I | ACCTGC | 2 cut(s) | 1717, 1986 |
| AccB1I | GGYRCC | 4 cut(s) | 227, 467, 1540, 3214 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1605 |
| AccBSI | CCGCTC | 8 cut(s) | 465, 523, 1351, 2581, 2608, 2746, 2950, 3404 |
| AccI | GTMKAC | 1 cut(s) | 2019 |
| AccIII | TCCGGA | 2 cut(s) | 270, 889 |
| AclI | AACGTT | 1 cut(s) | 800 |
| AclWI | GGATC | 3 cut(s) | 378, 391, 2758 |
| AcoI | YGGCCR | 5 cut(s) | 33, 856, 923, 1585, 2877 |
| AcsI | RAATTY | 5 cut(s) | 1083, 1554, 1590, 1732, 2585 |
| AcuI | CTGAAG | 5 cut(s) | 791, 1102, 2375, 2653, 3075 |
| AcvI | CACGTG | 2 cut(s) | 854, 917 |
| AcyI | GRCGYC | 5 cut(s) | 468, 876, 2401, 2723, 3200 |
| AfaI | GTAC | 3 cut(s) | 454, 921, 979 |
| AfeI | AGCGCT | 1 cut(s) | 1623 |
| AflIII | ACRYGT | 6 cut(s) | 914, 916, 1155, 1602, 1922, 2033 |
| AgeI | ACCGGT | 1 cut(s) | 2000 |
| AgsI | TTSAA | 7 cut(s) | 50, 1553, 2045, 2174, 3086, 3094, 3287 |
| AhdI | GACNNNNNGTC | 4 cut(s) | 1443, 1786, 2682, 3426 |
| AjiI | CACGTC | 3 cut(s) | 187, 442, 1156 |
| AjnI | CCWGG | 9 cut(s) | 234, 445, 980, 2118, 2535, 2715, 2736, 2766, 3384 |
| AleI | CACNNNNGTG | 1 cut(s) | 2384 |
| Alw21I | GWGCWC | 3 cut(s) | 478, 1503, 3295 |
| Alw44I | GTGCAC | 1 cut(s) | 1499 |
| AlwI | GGATC | 3 cut(s) | 378, 391, 2758 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 2014, 2737 |
| Ama87I | CYCGRG | 5 cut(s) | 379, 2907, 3209, 3298, 3438 |
| Aor13HI | TCCGGA | 2 cut(s) | 270, 889 |
| Aor51HI | AGCGCT | 1 cut(s) | 1623 |
| ApaI | GGGCCC | 2 cut(s) | 2461, 3148 |
| ApaLI | GTGCAC | 1 cut(s) | 1499 |
| ApoI | RAATTY | 5 cut(s) | 1083, 1554, 1590, 1732, 2585 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 2389, 2421 |
| AsiGI | ACCGGT | 1 cut(s) | 2000 |
| AsuC2I | CCSGG | 3 cut(s) | 254, 2055, 2140 |
| AsuNHI | GCTAGC | 5 cut(s) | 565, 626, 760, 1354, 1618 |
| AvaI | CYCGRG | 5 cut(s) | 379, 2907, 3209, 3298, 3438 |
| AvaII | GGWCC | 6 cut(s) | 1803, 1845, 2095, 2316, 2486, 3061 |
| BaeGI | GKGCMC | 5 cut(s) | 232, 853, 1503, 2461, 3148 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 198, 231 |
| BalI | TGGCCA | 3 cut(s) | 858, 1587, 2879 |
| BamHI | GGATCC | 1 cut(s) | 383 |
| BanI | GGYRCC | 4 cut(s) | 227, 467, 1540, 3214 |
| BanII | GRGCYC | 3 cut(s) | 2280, 2461, 3148 |
| BauI | CACGAG | 1 cut(s) | 3372 |
| BbrPI | CACGTG | 2 cut(s) | 854, 917 |
| Bbv12I | GWGCWC | 3 cut(s) | 478, 1503, 3295 |
| BccI | CCATC | 9 cut(s) | 268, 495, 867, 1031, 1070, 1102, 2329, 2604, 2888 |
| BceAI | ACGGC | 4 cut(s) | 938, 1481, 3202, 3424 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 2888, 2922 |
| BciT130I | CCWGG | 9 cut(s) | 236, 447, 982, 2120, 2537, 2717, 2738, 2768, 3386 |
| BciVI | GTATCC | 2 cut(s) | 501, 897 |
| BclI | TGATCA | 2 cut(s) | 141, 163 |
| BcnI | CCSGG | 3 cut(s) | 254, 2055, 2140 |
| BfmI | CTRYAG | 4 cut(s) | 1717, 2850, 2942, 2984 |
| BfoI | RGCGCY | 7 cut(s) | 471, 1625, 1711, 1757, 2213, 2261, 3183 |
| BfuAI | ACCTGC | 2 cut(s) | 1717, 1986 |
| BfuI | GTATCC | 2 cut(s) | 501, 897 |
| BlpI | GCTNAGC | 4 cut(s) | 580, 641, 677, 775 |
| Bme18I | GGWCC | 6 cut(s) | 1803, 1845, 2095, 2316, 2486, 3061 |
| BmeRI | GACNNNNNGTC | 4 cut(s) | 1443, 1786, 2682, 3426 |
| BmeT110I | CYCGRG | 5 cut(s) | 379, 2907, 3209, 3298, 3438 |
| BmgBI | CACGTC | 3 cut(s) | 187, 442, 1156 |
| BmrI | ACTGGG | 3 cut(s) | 2340, 3199, 3352 |
| BmsI | GCATC | 9 cut(s) | 138, 163, 436, 1464, 1478, 2366, 2836, 2845, 3153 |
| BmtI | GCTAGC | 5 cut(s) | 569, 630, 764, 1358, 1622 |
| BmuI | ACTGGG | 3 cut(s) | 2340, 3199, 3352 |
| BplI | GAGNNNNNCTC | 6 cut(s) | 1515, 1547, 2506, 2538, 3304, 3336 |
| BpmI | CTGGAG | 7 cut(s) | 243, 539, 2141, 2201, 2942, 3047, 3420 |
| Bpu1102I | GCTNAGC | 4 cut(s) | 580, 641, 677, 775 |
| BpuEI | CTTGAG | 2 cut(s) | 173, 2795 |
| BpuMI | CCSGG | 3 cut(s) | 254, 2055, 2140 |
| Bsa29I | ATCGAT | 1 cut(s) | 1472 |
| BsaAI | YACGTR | 3 cut(s) | 854, 908, 917 |
| BsaHI | GRCGYC | 5 cut(s) | 468, 876, 2401, 2723, 3200 |
| BsaI | GGTCTC | 1 cut(s) | 2441 |
| BsaWI | WCCGGW | 4 cut(s) | 270, 889, 2000, 2203 |
| Bse118I | RCCGGY | 4 cut(s) | 2000, 2344, 3256, 3325 |
| BseAI | TCCGGA | 2 cut(s) | 270, 889 |
| BseBI | CCWGG | 9 cut(s) | 236, 447, 982, 2120, 2537, 2717, 2738, 2768, 3386 |
| BseCI | ATCGAT | 1 cut(s) | 1472 |
| BseGI | GGATG | 8 cut(s) | 153, 178, 279, 1113, 2340, 2381, 2443, 3466 |
| BseMII | CTCAG | 7 cut(s) | 84, 201, 1290, 2312, 2767, 3038, 3239 |
| BseRI | GAGGAG | 4 cut(s) | 58, 2447, 2774, 3339 |
| BseSI | GKGCMC | 5 cut(s) | 232, 853, 1503, 2461, 3148 |
| BseX3I | CGGCCG | 1 cut(s) | 923 |
| BseYI | CCCAGC | 6 cut(s) | 962, 1841, 2916, 3140, 3204, 3339 |
| BsgI | GTGCAG | 2 cut(s) | 290, 1664 |
| Bsh1285I | CGRYCG | 3 cut(s) | 358, 926, 3326 |
| BshNI | GGYRCC | 4 cut(s) | 227, 467, 1540, 3214 |
| BshTI | ACCGGT | 1 cut(s) | 2000 |
| BshVI | ATCGAT | 1 cut(s) | 1472 |
| BsiEI | CGRYCG | 3 cut(s) | 358, 926, 3326 |
| BsiHKAI | GWGCWC | 3 cut(s) | 478, 1503, 3295 |
| BsiHKCI | CYCGRG | 5 cut(s) | 379, 2907, 3209, 3298, 3438 |
| BsmBI | CGTCTC | 2 cut(s) | 432, 2117 |
| BsmI | GAATGC | 3 cut(s) | 1417, 3089, 3121 |
| Bso31I | GGTCTC | 1 cut(s) | 2441 |
| BsoBI | CYCGRG | 5 cut(s) | 379, 2907, 3209, 3298, 3438 |
| Bsp120I | GGGCCC | 2 cut(s) | 2457, 3144 |
| Bsp1286I | GDGCHC | 8 cut(s) | 232, 478, 853, 1503, 2280, 2461, 3148, 3295 |
| Bsp13I | TCCGGA | 2 cut(s) | 270, 889 |
| Bsp143I | GATC | 6 cut(s) | 141, 163, 383, 1764, 2106, 2763 |
| Bsp1720I | GCTNAGC | 4 cut(s) | 580, 641, 677, 775 |
| Bsp19I | CCATGG | 2 cut(s) | 133, 1278 |
| BspCNI | CTCAG | 7 cut(s) | 85, 202, 1291, 2311, 2766, 3039, 3238 |
| BspDI | ATCGAT | 1 cut(s) | 1472 |
| BspEI | TCCGGA | 2 cut(s) | 270, 889 |
| BspHI | TCATGA | 1 cut(s) | 2565 |
| BspMAI | CTGCAG | 4 cut(s) | 1721, 2854, 2946, 2988 |
| BspMI | ACCTGC | 2 cut(s) | 1717, 1986 |
| BspOI | GCTAGC | 5 cut(s) | 569, 630, 764, 1358, 1622 |
| BspPI | GGATC | 3 cut(s) | 378, 391, 2758 |
| BspT107I | GGYRCC | 4 cut(s) | 227, 467, 1540, 3214 |
| BspTNI | GGTCTC | 1 cut(s) | 2441 |
| BsrBI | CCGCTC | 8 cut(s) | 465, 523, 1351, 2581, 2608, 2746, 2950, 3404 |
| BsrFI | RCCGGY | 4 cut(s) | 2000, 2344, 3256, 3325 |
| BssAI | RCCGGY | 4 cut(s) | 2000, 2344, 3256, 3325 |
| BssMI | GATC | 6 cut(s) | 141, 163, 383, 1764, 2106, 2763 |
| BssNI | GRCGYC | 5 cut(s) | 468, 876, 2401, 2723, 3200 |
| BssSI | CACGAG | 1 cut(s) | 3372 |
| BssT1I | CCWWGG | 7 cut(s) | 133, 1265, 1278, 1519, 1711, 2493, 2961 |
| Bst2BI | CACGAG | 1 cut(s) | 3372 |
| Bst2UI | CCWGG | 9 cut(s) | 236, 447, 982, 2120, 2537, 2717, 2738, 2768, 3386 |
| Bst4CI | ACNGT | 8 cut(s) | 332, 1456, 1666, 2099, 2161, 2288, 2576, 3099 |
| Bst6I | CTCTTC | 5 cut(s) | 1926, 2234, 2424, 3257, 3486 |
| BstACI | GRCGYC | 5 cut(s) | 468, 876, 2401, 2723, 3200 |
| BstBAI | YACGTR | 3 cut(s) | 854, 908, 917 |
| BstDSI | CCRYGG | 5 cut(s) | 133, 1278, 1665, 2223, 2860 |
| BstENI | CCTNNNNNAGG | 3 cut(s) | 1047, 2831, 2942 |
| BstF5I | GGATG | 8 cut(s) | 153, 178, 279, 1113, 2340, 2381, 2443, 3466 |
| BstH2I | RGCGCY | 7 cut(s) | 471, 1625, 1711, 1757, 2213, 2261, 3183 |
| BstKTI | GATC | 6 cut(s) | 144, 166, 386, 1767, 2109, 2766 |
| BstMBI | GATC | 6 cut(s) | 141, 163, 383, 1764, 2106, 2763 |
| BstMCI | CGRYCG | 3 cut(s) | 358, 926, 3326 |
| BstNI | CCWGG | 9 cut(s) | 236, 447, 982, 2120, 2537, 2717, 2738, 2768, 3386 |
| BstNSI | RCATGY | 1 cut(s) | 1606 |
| BstSFI | CTRYAG | 4 cut(s) | 1717, 2850, 2942, 2984 |
| BstSLI | GKGCMC | 5 cut(s) | 232, 853, 1503, 2461, 3148 |
| BstX2I | RGATCY | 2 cut(s) | 383, 2763 |
| BstXI | CCANNNNNNTGG | 3 cut(s) | 191, 2092, 2335 |
| BstYI | RGATCY | 2 cut(s) | 383, 2763 |
| BstZI | CGGCCG | 1 cut(s) | 923 |
| Bsu15I | ATCGAT | 1 cut(s) | 1472 |
| BsuI | GTATCC | 2 cut(s) | 501, 897 |
| BsuTUI | ATCGAT | 1 cut(s) | 1472 |
| BtgI | CCRYGG | 5 cut(s) | 133, 1278, 1665, 2223, 2860 |
| BtgZI | GCGATG | 2 cut(s) | 948, 3134 |
| BtrI | CACGTC | 3 cut(s) | 187, 442, 1156 |
| BtsCI | GGATG | 8 cut(s) | 153, 178, 279, 1113, 2340, 2381, 2443, 3466 |
| BtsI | GCAGTG | 1 cut(s) | 1141 |
| BtsIMutI | CAGTG | 7 cut(s) | 1141, 1381, 2177, 2328, 2581, 2841, 3396 |
| BveI | ACCTGC | 2 cut(s) | 1717, 1986 |
| CaiI | CAGNNNCTG | 2 cut(s) | 2014, 2737 |
| CciI | TCATGA | 1 cut(s) | 2565 |
| Cfr10I | RCCGGY | 4 cut(s) | 2000, 2344, 3256, 3325 |
| Cfr42I | CCGCGG | 1 cut(s) | 2863 |
| ClaI | ATCGAT | 1 cut(s) | 1472 |
| CseI | GACGC | 9 cut(s) | 837, 884, 1187, 1283, 1447, 1930, 2390, 2712, 3189 |
| Csp6I | GTAC | 3 cut(s) | 453, 920, 978 |
| CspAI | ACCGGT | 1 cut(s) | 2000 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 2272, 2307 |
| CviAII | CATG | 8 cut(s) | 14, 134, 1211, 1279, 1603, 1786, 2566, 3510 |
| CviQI | GTAC | 3 cut(s) | 453, 920, 978 |
| DinI | GGCGCC | 1 cut(s) | 469 |
| DpnI | GATC | 6 cut(s) | 143, 165, 385, 1766, 2108, 2765 |
| DpnII | GATC | 6 cut(s) | 141, 163, 383, 1764, 2106, 2763 |
| DriI | GACNNNNNGTC | 4 cut(s) | 1443, 1786, 2682, 3426 |
| EaeI | YGGCCR | 5 cut(s) | 33, 856, 923, 1585, 2877 |
| EagI | CGGCCG | 1 cut(s) | 923 |
| Eam1104I | CTCTTC | 5 cut(s) | 1926, 2234, 2424, 3257, 3486 |
| Eam1105I | GACNNNNNGTC | 4 cut(s) | 1443, 1786, 2682, 3426 |
| EarI | CTCTTC | 5 cut(s) | 1926, 2234, 2424, 3257, 3486 |
| EclXI | CGGCCG | 1 cut(s) | 923 |
| Eco130I | CCWWGG | 7 cut(s) | 133, 1265, 1278, 1519, 1711, 2493, 2961 |
| Eco147I | AGGCCT | 1 cut(s) | 2362 |
| Eco24I | GRGCYC | 3 cut(s) | 2280, 2461, 3148 |
| Eco31I | GGTCTC | 1 cut(s) | 2441 |
| Eco47I | GGWCC | 6 cut(s) | 1803, 1845, 2095, 2316, 2486, 3061 |
| Eco47III | AGCGCT | 1 cut(s) | 1623 |
| Eco52I | CGGCCG | 1 cut(s) | 923 |
| Eco57I | CTGAAG | 5 cut(s) | 791, 1102, 2375, 2653, 3075 |
| Eco72I | CACGTG | 2 cut(s) | 854, 917 |
| Eco88I | CYCGRG | 5 cut(s) | 379, 2907, 3209, 3298, 3438 |
| EcoNI | CCTNNNNNAGG | 3 cut(s) | 1047, 2831, 2942 |
| EcoO109I | RGGNCCY | 4 cut(s) | 1803, 2457, 3144, 3145 |
| EcoRI | GAATTC | 1 cut(s) | 2585 |
| EcoRII | CCWGG | 9 cut(s) | 234, 445, 980, 2118, 2535, 2715, 2736, 2766, 3384 |
| EcoT14I | CCWWGG | 7 cut(s) | 133, 1265, 1278, 1519, 1711, 2493, 2961 |
| EcoT38I | GRGCYC | 3 cut(s) | 2280, 2461, 3148 |
| EgeI | GGCGCC | 1 cut(s) | 469 |
| EheI | GGCGCC | 1 cut(s) | 469 |
| ErhI | CCWWGG | 7 cut(s) | 133, 1265, 1278, 1519, 1711, 2493, 2961 |
| Esp3I | CGTCTC | 2 cut(s) | 432, 2117 |
| FaeI | CATG | 8 cut(s) | 17, 137, 1214, 1282, 1606, 1789, 2569, 3513 |
| FatI | CATG | 8 cut(s) | 13, 133, 1210, 1278, 1602, 1785, 2565, 3509 |
| FbaI | TGATCA | 2 cut(s) | 141, 163 |
| FblI | GTMKAC | 1 cut(s) | 2019 |
| FokI | GGATG | 8 cut(s) | 160, 185, 286, 1120, 2347, 2388, 2450, 3453 |
| FriOI | GRGCYC | 3 cut(s) | 2280, 2461, 3148 |
| GsaI | CCCAGC | 6 cut(s) | 966, 1845, 2920, 3144, 3208, 3343 |
| GsuI | CTGGAG | 7 cut(s) | 243, 539, 2141, 2201, 2942, 3047, 3420 |
| HaeII | RGCGCY | 7 cut(s) | 471, 1625, 1711, 1757, 2213, 2261, 3183 |
| HgaI | GACGC | 9 cut(s) | 837, 884, 1187, 1283, 1447, 1930, 2390, 2712, 3189 |
| Hin1I | GRCGYC | 5 cut(s) | 468, 876, 2401, 2723, 3200 |
| Hin1II | CATG | 8 cut(s) | 17, 137, 1214, 1282, 1606, 1789, 2569, 3513 |
| HincII | GTYRAC | 3 cut(s) | 2020, 2408, 2977 |
| HindII | GTYRAC | 3 cut(s) | 2020, 2408, 2977 |
| HindIII | AAGCTT | 1 cut(s) | 1034 |
| Hpy166II | GTNNAC | 7 cut(s) | 920, 1459, 1501, 2020, 2247, 2408, 2977 |
| Hpy8I | GTNNAC | 7 cut(s) | 920, 1459, 1501, 2020, 2247, 2408, 2977 |
| Hpy99I | CGWCG | 8 cut(s) | 435, 878, 1456, 1867, 2292, 2406, 2680, 2728 |
| HpyCH4III | ACNGT | 8 cut(s) | 332, 1456, 1666, 2099, 2161, 2288, 2576, 3099 |
| Hsp92I | GRCGYC | 5 cut(s) | 468, 876, 2401, 2723, 3200 |
| Hsp92II | CATG | 8 cut(s) | 17, 137, 1214, 1282, 1606, 1789, 2569, 3513 |
| KasI | GGCGCC | 1 cut(s) | 467 |
| Kpn2I | TCCGGA | 2 cut(s) | 270, 889 |
| KroI | GCCGGC | 2 cut(s) | 2344, 3256 |
| KroNI | GCCGGC | 2 cut(s) | 2346, 3258 |
| Ksp22I | TGATCA | 2 cut(s) | 141, 163 |
| KspI | CCGCGG | 1 cut(s) | 2863 |
| Kzo9I | GATC | 6 cut(s) | 141, 163, 383, 1764, 2106, 2763 |
| LweI | GCATC | 9 cut(s) | 138, 163, 436, 1464, 1478, 2366, 2836, 2845, 3153 |
| MalI | GATC | 6 cut(s) | 143, 165, 385, 1766, 2108, 2765 |
| MbiI | CCGCTC | 8 cut(s) | 465, 523, 1351, 2581, 2608, 2746, 2950, 3404 |
| MboI | GATC | 6 cut(s) | 141, 163, 383, 1764, 2106, 2763 |
| MflI | RGATCY | 2 cut(s) | 383, 2763 |
| MhlI | GDGCHC | 8 cut(s) | 232, 478, 853, 1503, 2280, 2461, 3148, 3295 |
| MlsI | TGGCCA | 3 cut(s) | 858, 1587, 2879 |
| MluCI | AATT | 8 cut(s) | 159, 284, 1083, 1554, 1590, 1732, 2113, 2585 |
| MluI | ACGCGT | 1 cut(s) | 1922 |
| MluNI | TGGCCA | 3 cut(s) | 858, 1587, 2879 |
| Mly113I | GGCGCC | 1 cut(s) | 468 |
| MmeI | TCCRAC | 3 cut(s) | 1860, 1872, 3342 |
| Mox20I | TGGCCA | 3 cut(s) | 858, 1587, 2879 |
| MreI | CGCCGGCG | 1 cut(s) | 3256 |
| MroI | TCCGGA | 2 cut(s) | 270, 889 |
| MroNI | GCCGGC | 2 cut(s) | 2344, 3256 |
| MscI | TGGCCA | 3 cut(s) | 858, 1587, 2879 |
| MseI | TTAA | 5 cut(s) | 341, 885, 1613, 1875, 2702 |
| MslI | CAYNNNNRTG | 3 cut(s) | 189, 2333, 2384 |
| Msp20I | TGGCCA | 3 cut(s) | 858, 1587, 2879 |
| Mva1269I | GAATGC | 3 cut(s) | 1417, 3089, 3121 |
| MvaI | CCWGG | 9 cut(s) | 236, 447, 982, 2120, 2537, 2717, 2738, 2768, 3386 |
| NaeI | GCCGGC | 2 cut(s) | 2346, 3258 |
| NarI | GGCGCC | 1 cut(s) | 468 |
| NciI | CCSGG | 3 cut(s) | 254, 2055, 2140 |
| NcoI | CCATGG | 2 cut(s) | 133, 1278 |
| NdeII | GATC | 6 cut(s) | 141, 163, 383, 1764, 2106, 2763 |
| NgoMIV | GCCGGC | 2 cut(s) | 2344, 3256 |
| NheI | GCTAGC | 5 cut(s) | 565, 626, 760, 1354, 1618 |
| NlaIII | CATG | 8 cut(s) | 17, 137, 1214, 1282, 1606, 1789, 2569, 3513 |
| NmeAIII | GCCGAG | 3 cut(s) | 951, 1143, 1441 |
| NspI | RCATGY | 1 cut(s) | 1606 |
| OliI | CACNNNNGTG | 1 cut(s) | 2384 |
| PagI | TCATGA | 1 cut(s) | 2565 |
| PaqCI | CACCTGC | 1 cut(s) | 1717 |
| PasI | CCCWGGG | 1 cut(s) | 235 |
| PceI | AGGCCT | 1 cut(s) | 2362 |
| PciI | ACATGT | 1 cut(s) | 1602 |
| PcsI | WCGNNNNNNNCGW | 7 cut(s) | 913, 1199, 1291, 1945, 2032, 2418, 2549 |
| PctI | GAATGC | 3 cut(s) | 1417, 3089, 3121 |
| PdiI | GCCGGC | 2 cut(s) | 2346, 3258 |
| PfeI | GAWTC | 7 cut(s) | 121, 195, 1142, 1771, 1969, 2167, 2540 |
| PflFI | GACNNNGTC | 6 cut(s) | 531, 592, 653, 689, 726, 787 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1605 |
| PfoI | TCCNGGA | 1 cut(s) | 2118 |
| PinAI | ACCGGT | 1 cut(s) | 2000 |
| PluTI | GGCGCC | 1 cut(s) | 471 |
| PmaCI | CACGTG | 2 cut(s) | 854, 917 |
| PmlI | CACGTG | 2 cut(s) | 854, 917 |
| Ppu21I | YACGTR | 3 cut(s) | 854, 908, 917 |
| PpuMI | RGGWCCY | 1 cut(s) | 1803 |
| PscI | ACATGT | 1 cut(s) | 1602 |
| Psp1406I | AACGTT | 1 cut(s) | 800 |
| Psp5II | RGGWCCY | 1 cut(s) | 1803 |
| Psp6I | CCWGG | 9 cut(s) | 234, 445, 980, 2118, 2535, 2715, 2736, 2766, 3384 |
| PspCI | CACGTG | 2 cut(s) | 854, 917 |
| PspFI | CCCAGC | 6 cut(s) | 962, 1841, 2916, 3140, 3204, 3339 |
| PspGI | CCWGG | 9 cut(s) | 234, 445, 980, 2118, 2535, 2715, 2736, 2766, 3384 |
| PspOMI | GGGCCC | 2 cut(s) | 2457, 3144 |
| PspPPI | RGGWCCY | 1 cut(s) | 1803 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 2546, 2578 |
| PstI | CTGCAG | 4 cut(s) | 1721, 2854, 2946, 2988 |
| PstNI | CAGNNNCTG | 2 cut(s) | 2014, 2737 |
| PsuI | RGATCY | 2 cut(s) | 383, 2763 |
| PsyI | GACNNNGTC | 6 cut(s) | 531, 592, 653, 689, 726, 787 |
| PvuII | CAGCTG | 1 cut(s) | 2920 |
| RsaI | GTAC | 3 cut(s) | 454, 921, 979 |
| RsaNI | GTAC | 3 cut(s) | 453, 920, 978 |
| RseI | CAYNNNNRTG | 3 cut(s) | 189, 2333, 2384 |
| SacII | CCGCGG | 1 cut(s) | 2863 |
| SalI | GTCGAC | 1 cut(s) | 2018 |
| SaqAI | TTAA | 5 cut(s) | 341, 885, 1613, 1875, 2702 |
| Sau3AI | GATC | 6 cut(s) | 141, 163, 383, 1764, 2106, 2763 |
| SduI | GDGCHC | 8 cut(s) | 232, 478, 853, 1503, 2280, 2461, 3148, 3295 |
| SfaNI | GCATC | 9 cut(s) | 138, 163, 436, 1464, 1478, 2366, 2836, 2845, 3153 |
| SfcI | CTRYAG | 4 cut(s) | 1717, 2850, 2942, 2984 |
| SfoI | GGCGCC | 1 cut(s) | 469 |
| Sfr303I | CCGCGG | 1 cut(s) | 2863 |
| SgrAI | CRCCGGYG | 1 cut(s) | 3256 |
| SgrBI | CCGCGG | 1 cut(s) | 2863 |
| SinI | GGWCC | 6 cut(s) | 1803, 1845, 2095, 2316, 2486, 3061 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 189, 2333, 2384 |
| SmlI | CTYRAG | 2 cut(s) | 152, 2774 |
| SmoI | CTYRAG | 2 cut(s) | 152, 2774 |
| Sse9I | AATT | 8 cut(s) | 159, 284, 1083, 1554, 1590, 1732, 2113, 2585 |
| SseBI | AGGCCT | 1 cut(s) | 2362 |
| SspDI | GGCGCC | 1 cut(s) | 467 |
| StuI | AGGCCT | 1 cut(s) | 2362 |
| StyI | CCWWGG | 7 cut(s) | 133, 1265, 1278, 1519, 1711, 2493, 2961 |
| TaaI | ACNGT | 8 cut(s) | 332, 1456, 1666, 2099, 2161, 2288, 2576, 3099 |
| TaqII | GACCGA | 2 cut(s) | 2672, 3026 |
| TasI | AATT | 8 cut(s) | 159, 284, 1083, 1554, 1590, 1732, 2113, 2585 |
| TfiI | GAWTC | 7 cut(s) | 121, 195, 1142, 1771, 1969, 2167, 2540 |
| Tru1I | TTAA | 5 cut(s) | 341, 885, 1613, 1875, 2702 |
| Tru9I | TTAA | 5 cut(s) | 341, 885, 1613, 1875, 2702 |
| TscAI | CASTG | 7 cut(s) | 1141, 1381, 2184, 2335, 2581, 2848, 3403 |
| TspDTI | ATGAA | 5 cut(s) | 17, 73, 823, 2554, 3137 |
| TspGWI | ACGGA | 4 cut(s) | 324, 968, 1191, 2029 |
| TspRI | CASTG | 7 cut(s) | 1141, 1381, 2184, 2335, 2581, 2848, 3403 |
| Tth111I | GACNNNGTC | 6 cut(s) | 531, 592, 653, 689, 726, 787 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1605 |
| VneI | GTGCAC | 1 cut(s) | 1499 |
| VpaK11BI | GGWCC | 6 cut(s) | 1803, 1845, 2095, 2316, 2486, 3061 |
| XagI | CCTNNNNNAGG | 3 cut(s) | 1047, 2831, 2942 |
| XapI | RAATTY | 5 cut(s) | 1083, 1554, 1590, 1732, 2585 |
| XceI | RCATGY | 1 cut(s) | 1606 |
| XmiI | GTMKAC | 1 cut(s) | 2019 |