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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 115 |
| Acc36I | ACCTGC | 2 cut(s) | 115, 384 |
| AccB1I | GGYRCC | 2 cut(s) | 850, 1588 |
| AccBSI | CCGCTC | 4 cut(s) | 299, 686, 982, 1120 |
| AccI | GTMKAC | 2 cut(s) | 417, 619 |
| AccII | CGCG | 9 cut(s) | 322, 339, 463, 471, 631, 926, 1015, 1440, 1836 |
| AccIII | TCCGGA | 1 cut(s) | 568 |
| AclWI | GGATC | 1 cut(s) | 1132 |
| AcoI | YGGCCR | 3 cut(s) | 213, 1251, 1329 |
| AcsI | RAATTY | 3 cut(s) | 169, 230, 959 |
| AcuI | CTGAAG | 2 cut(s) | 749, 1027 |
| AcvI | CACGTG | 2 cut(s) | 434, 1235 |
| AcyI | GRCGYC | 4 cut(s) | 474, 851, 1097, 1574 |
| AfaI | GTAC | 2 cut(s) | 929, 1642 |
| AfeI | AGCGCT | 1 cut(s) | 21 |
| AfiI | CCNNNNNNNGG | 9 cut(s) | 195, 222, 252, 595, 1260, 1318, 1363, 1585, 1738 |
| AflIII | ACRYGT | 2 cut(s) | 320, 431 |
| AgeI | ACCGGT | 1 cut(s) | 398 |
| AgsI | TTSAA | 5 cut(s) | 443, 664, 1460, 1468, 1661 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 184 |
| AjiI | CACGTC | 1 cut(s) | 1267 |
| AjnI | CCWGG | 6 cut(s) | 516, 1089, 1110, 1140, 1376, 1758 |
| AleI | CACNNNNGTG | 2 cut(s) | 758, 975 |
| AluBI | AGCT | 9 cut(s) | 160, 488, 536, 865, 1047, 1243, 1294, 1427, 1871 |
| AluI | AGCT | 9 cut(s) | 160, 488, 536, 865, 1047, 1243, 1294, 1427, 1871 |
| Alw26I | GTCTC | 4 cut(s) | 515, 815, 1291, 1602 |
| AlwI | GGATC | 1 cut(s) | 1132 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 357, 1111 |
| Ama87I | CYCGRG | 4 cut(s) | 1583, 1672, 1773, 1812 |
| Aor13HI | TCCGGA | 1 cut(s) | 568 |
| Aor51HI | AGCGCT | 1 cut(s) | 21 |
| ApaI | GGGCCC | 2 cut(s) | 835, 1522 |
| ApoI | RAATTY | 3 cut(s) | 169, 230, 959 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 763, 795 |
| AsiGI | ACCGGT | 1 cut(s) | 398 |
| AspLEI | GCGC | 9 cut(s) | 22, 154, 309, 633, 853, 1017, 1442, 1556, 1838 |
| AsuC2I | CCSGG | 1 cut(s) | 453 |
| AsuHPI | GGTGA | 7 cut(s) | 139, 388, 574, 1402, 1418, 1579, 1718 |
| AvaI | CYCGRG | 4 cut(s) | 1583, 1672, 1773, 1812 |
| AvaII | GGWCC | 5 cut(s) | 201, 243, 493, 690, 1435 |
| BaeGI | GKGCMC | 2 cut(s) | 835, 1522 |
| BalI | TGGCCA | 2 cut(s) | 215, 1253 |
| BanI | GGYRCC | 2 cut(s) | 850, 1588 |
| BanII | GRGCYC | 3 cut(s) | 653, 835, 1522 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1633, 1665 |
| BbrPI | CACGTG | 2 cut(s) | 434, 1235 |
| BccI | CCATC | 1 cut(s) | 1775 |
| BceAI | ACGGC | 3 cut(s) | 234, 422, 1659 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 461, 495, 711, 745 |
| BciT130I | CCWGG | 6 cut(s) | 518, 1091, 1112, 1142, 1378, 1760 |
| BciVI | GTATCC | 1 cut(s) | 1207 |
| BcnI | CCSGG | 1 cut(s) | 453 |
| BcoDI | GTCTC | 4 cut(s) | 515, 815, 1291, 1602 |
| BfaI | CTAG | 4 cut(s) | 738, 986, 1001, 1523 |
| BfmI | CTRYAG | 3 cut(s) | 115, 1224, 1358 |
| BfoI | RGCGCY | 4 cut(s) | 23, 155, 854, 1557 |
| BfuAI | ACCTGC | 2 cut(s) | 115, 384 |
| BfuI | GTATCC | 1 cut(s) | 1207 |
| BlpI | GCTNAGC | 1 cut(s) | 549 |
| Bme1390I | CCNGG | 7 cut(s) | 453, 518, 1091, 1112, 1142, 1378, 1760 |
| Bme18I | GGWCC | 5 cut(s) | 201, 243, 493, 690, 1435 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 184 |
| BmeT110I | CYCGRG | 4 cut(s) | 1583, 1672, 1773, 1812 |
| BmgBI | CACGTC | 1 cut(s) | 1267 |
| BmrFI | CCNGG | 7 cut(s) | 453, 518, 1091, 1112, 1142, 1378, 1760 |
| BmrI | ACTGGG | 2 cut(s) | 1573, 1726 |
| BmsI | GCATC | 4 cut(s) | 357, 1210, 1219, 1527 |
| BmuI | ACTGGG | 2 cut(s) | 1573, 1726 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 1676, 1708, 1678, 1710 |
| BpmI | CTGGAG | 4 cut(s) | 539, 599, 1316, 1337 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 549 |
| BpuEI | CTTGAG | 2 cut(s) | 851, 1169 |
| BpuMI | CCSGG | 1 cut(s) | 453 |
| Bsa29I | ATCGAT | 1 cut(s) | 1350 |
| BsaAI | YACGTR | 2 cut(s) | 434, 1235 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1352 |
| BsaHI | GRCGYC | 4 cut(s) | 474, 851, 1097, 1574 |
| BsaJI | CCNNGG | 8 cut(s) | 63, 216, 594, 1110, 1141, 1335, 1584, 1813 |
| BsaWI | WCCGGW | 2 cut(s) | 398, 568 |
| BsaXI | ACNNNNNCTCC | 8 cut(s) | 248, 278, 512, 542, 601, 631, 1271, 1301 |
| Bsc4I | CCNNNNNNNGG | 9 cut(s) | 195, 222, 252, 595, 1260, 1318, 1363, 1585, 1738 |
| Bse118I | RCCGGY | 5 cut(s) | 398, 718, 1612, 1630, 1699 |
| Bse1I | ACTGG | 6 cut(s) | 96, 589, 1033, 1404, 1568, 1732 |
| Bse3DI | GCAATG | 1 cut(s) | 729 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1352 |
| BseAI | TCCGGA | 1 cut(s) | 568 |
| BseBI | CCWGG | 6 cut(s) | 518, 1091, 1112, 1142, 1378, 1760 |
| BseCI | ATCGAT | 1 cut(s) | 1350 |
| BseDI | CCNNGG | 8 cut(s) | 63, 216, 594, 1110, 1141, 1335, 1584, 1813 |
| BseGI | GGATG | 2 cut(s) | 817, 1840 |
| BseJI | GATNNNNATC | 1 cut(s) | 1352 |
| BseLI | CCNNNNNNNGG | 9 cut(s) | 195, 222, 252, 595, 1260, 1318, 1363, 1585, 1738 |
| BseMI | GCAATG | 1 cut(s) | 729 |
| BseMII | CTCAG | 5 cut(s) | 563, 686, 1141, 1412, 1613 |
| BseNI | ACTGG | 6 cut(s) | 96, 589, 1033, 1404, 1568, 1732 |
| BseRI | GAGGAG | 4 cut(s) | 821, 1148, 1400, 1713 |
| BseSI | GKGCMC | 2 cut(s) | 835, 1522 |
| BseYI | CCCAGC | 5 cut(s) | 536, 704, 1514, 1578, 1713 |
| BsgI | GTGCAG | 1 cut(s) | 62 |
| Bsh1236I | CGCG | 9 cut(s) | 322, 339, 463, 471, 631, 926, 1015, 1440, 1836 |
| Bsh1285I | CGRYCG | 1 cut(s) | 1700 |
| BshNI | GGYRCC | 2 cut(s) | 850, 1588 |
| BshTI | ACCGGT | 1 cut(s) | 398 |
| BshVI | ATCGAT | 1 cut(s) | 1350 |
| BsiEI | CGRYCG | 1 cut(s) | 1700 |
| BsiHKCI | CYCGRG | 4 cut(s) | 1583, 1672, 1773, 1812 |
| BsiSI | CCGG | 8 cut(s) | 399, 452, 569, 602, 719, 1613, 1631, 1700 |
| BsiWI | CGTACG | 1 cut(s) | 927 |
| BslI | CCNNNNNNNGG | 9 cut(s) | 195, 222, 252, 595, 1260, 1318, 1363, 1585, 1738 |
| BsmAI | GTCTC | 4 cut(s) | 515, 815, 1291, 1602 |
| BsmBI | CGTCTC | 1 cut(s) | 515 |
| BsmI | GAATGC | 1 cut(s) | 1463 |
| BsoBI | CYCGRG | 4 cut(s) | 1583, 1672, 1773, 1812 |
| Bsp120I | GGGCCC | 2 cut(s) | 831, 1518 |
| Bsp1286I | GDGCHC | 3 cut(s) | 653, 835, 1522 |
| Bsp13I | TCCGGA | 1 cut(s) | 568 |
| Bsp143I | GATC | 4 cut(s) | 162, 504, 1137, 1347 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 549 |
| BspCNI | CTCAG | 5 cut(s) | 562, 685, 1140, 1413, 1612 |
| BspDI | ATCGAT | 1 cut(s) | 1350 |
| BspEI | TCCGGA | 1 cut(s) | 568 |
| BspFNI | CGCG | 9 cut(s) | 322, 339, 463, 471, 631, 926, 1015, 1440, 1836 |
| BspHI | TCATGA | 1 cut(s) | 939 |
| BspMAI | CTGCAG | 3 cut(s) | 119, 1228, 1362 |
| BspMI | ACCTGC | 2 cut(s) | 115, 384 |
| BspPI | GGATC | 1 cut(s) | 1132 |
| BspT107I | GGYRCC | 2 cut(s) | 850, 1588 |
| BsrBI | CCGCTC | 4 cut(s) | 299, 686, 982, 1120 |
| BsrDI | GCAATG | 1 cut(s) | 729 |
| BsrFI | RCCGGY | 5 cut(s) | 398, 718, 1612, 1630, 1699 |
| BsrI | ACTGG | 6 cut(s) | 96, 589, 1033, 1404, 1568, 1732 |
| BssAI | RCCGGY | 5 cut(s) | 398, 718, 1612, 1630, 1699 |
| BssECI | CCNNGG | 8 cut(s) | 63, 216, 594, 1110, 1141, 1335, 1584, 1813 |
| BssMI | GATC | 4 cut(s) | 162, 504, 1137, 1347 |
| BssNI | GRCGYC | 4 cut(s) | 474, 851, 1097, 1574 |
| BssT1I | CCWWGG | 1 cut(s) | 1335 |
| Bst2UI | CCWGG | 6 cut(s) | 518, 1091, 1112, 1142, 1378, 1760 |
| Bst4CI | ACNGT | 4 cut(s) | 64, 497, 559, 1473 |
| Bst6I | CTCTTC | 5 cut(s) | 324, 398, 665, 798, 1631 |
| BstACI | GRCGYC | 4 cut(s) | 474, 851, 1097, 1574 |
| BstBAI | YACGTR | 2 cut(s) | 434, 1235 |
| BstDEI | CTNAG | 6 cut(s) | 549, 672, 1101, 1127, 1421, 1599 |
| BstDSI | CCRYGG | 2 cut(s) | 63, 216 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1316 |
| BstF5I | GGATG | 2 cut(s) | 817, 1840 |
| BstFNI | CGCG | 9 cut(s) | 322, 339, 463, 471, 631, 926, 1015, 1440, 1836 |
| BstH2I | RGCGCY | 4 cut(s) | 23, 155, 854, 1557 |
| BstHHI | GCGC | 9 cut(s) | 22, 154, 309, 633, 853, 1017, 1442, 1556, 1838 |
| BstKTI | GATC | 4 cut(s) | 165, 507, 1140, 1350 |
| BstMAI | GTCTC | 4 cut(s) | 515, 815, 1291, 1602 |
| BstMBI | GATC | 4 cut(s) | 162, 504, 1137, 1347 |
| BstMCI | CGRYCG | 1 cut(s) | 1700 |
| BstNI | CCWGG | 6 cut(s) | 518, 1091, 1112, 1142, 1378, 1760 |
| BstNSI | RCATGY | 1 cut(s) | 1493 |
| BstSCI | CCNGG | 7 cut(s) | 451, 516, 1089, 1110, 1140, 1376, 1758 |
| BstSFI | CTRYAG | 3 cut(s) | 115, 1224, 1358 |
| BstSLI | GKGCMC | 2 cut(s) | 835, 1522 |
| BstUI | CGCG | 9 cut(s) | 322, 339, 463, 471, 631, 926, 1015, 1440, 1836 |
| BstX2I | RGATCY | 1 cut(s) | 1137 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 490 |
| BstYI | RGATCY | 1 cut(s) | 1137 |
| Bsu15I | ATCGAT | 1 cut(s) | 1350 |
| BsuI | GTATCC | 1 cut(s) | 1207 |
| BsuTUI | ATCGAT | 1 cut(s) | 1350 |
| BtgI | CCRYGG | 2 cut(s) | 63, 216 |
| BtgZI | GCGATG | 1 cut(s) | 1508 |
| BtrI | CACGTC | 1 cut(s) | 1267 |
| BtsCI | GGATG | 2 cut(s) | 817, 1840 |
| BtsI | GCAGTG | 1 cut(s) | 696 |
| BtsIMutI | CAGTG | 1 cut(s) | 696 |
| BveI | ACCTGC | 2 cut(s) | 115, 384 |
| CaiI | CAGNNNCTG | 2 cut(s) | 357, 1111 |
| CciI | TCATGA | 1 cut(s) | 939 |
| CfoI | GCGC | 9 cut(s) | 22, 154, 309, 633, 853, 1017, 1442, 1556, 1838 |
| Cfr10I | RCCGGY | 5 cut(s) | 398, 718, 1612, 1630, 1699 |
| ClaI | ATCGAT | 1 cut(s) | 1350 |
| CseI | GACGC | 4 cut(s) | 328, 482, 1086, 1563 |
| Csp6I | GTAC | 2 cut(s) | 928, 1641 |
| CspAI | ACCGGT | 1 cut(s) | 398 |
| CviAII | CATG | 4 cut(s) | 940, 1283, 1306, 1490 |
| CviQI | GTAC | 2 cut(s) | 928, 1641 |
| DdeI | CTNAG | 6 cut(s) | 549, 672, 1101, 1127, 1421, 1599 |
| DinI | GGCGCC | 1 cut(s) | 852 |
| DpnI | GATC | 4 cut(s) | 164, 506, 1139, 1349 |
| DpnII | GATC | 4 cut(s) | 162, 504, 1137, 1347 |
| DriI | GACNNNNNGTC | 1 cut(s) | 184 |
| EaeI | YGGCCR | 3 cut(s) | 213, 1251, 1329 |
| Eam1104I | CTCTTC | 5 cut(s) | 324, 398, 665, 798, 1631 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 184 |
| EarI | CTCTTC | 5 cut(s) | 324, 398, 665, 798, 1631 |
| EciI | GGCGGA | 6 cut(s) | 83, 379, 781, 1178, 1226, 1833 |
| Eco130I | CCWWGG | 1 cut(s) | 1335 |
| Eco147I | AGGCCT | 1 cut(s) | 736 |
| Eco24I | GRGCYC | 3 cut(s) | 653, 835, 1522 |
| Eco32I | GATATC | 1 cut(s) | 1354 |
| Eco47I | GGWCC | 5 cut(s) | 201, 243, 493, 690, 1435 |
| Eco47III | AGCGCT | 1 cut(s) | 21 |
| Eco57I | CTGAAG | 2 cut(s) | 749, 1027 |
| Eco72I | CACGTG | 2 cut(s) | 434, 1235 |
| Eco88I | CYCGRG | 4 cut(s) | 1583, 1672, 1773, 1812 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1316 |
| EcoO109I | RGGNCCY | 4 cut(s) | 201, 831, 1518, 1519 |
| EcoRI | GAATTC | 2 cut(s) | 230, 959 |
| EcoRII | CCWGG | 6 cut(s) | 516, 1089, 1110, 1140, 1376, 1758 |
| EcoRV | GATATC | 1 cut(s) | 1354 |
| EcoT14I | CCWWGG | 1 cut(s) | 1335 |
| EcoT38I | GRGCYC | 3 cut(s) | 653, 835, 1522 |
| EgeI | GGCGCC | 1 cut(s) | 852 |
| EheI | GGCGCC | 1 cut(s) | 852 |
| ErhI | CCWWGG | 1 cut(s) | 1335 |
| Esp3I | CGTCTC | 1 cut(s) | 515 |
| FaeI | CATG | 4 cut(s) | 943, 1286, 1309, 1493 |
| FatI | CATG | 4 cut(s) | 939, 1282, 1305, 1489 |
| FblI | GTMKAC | 2 cut(s) | 417, 619 |
| FokI | GGATG | 2 cut(s) | 824, 1827 |
| FriOI | GRGCYC | 3 cut(s) | 653, 835, 1522 |
| FspBI | CTAG | 4 cut(s) | 738, 986, 1001, 1523 |
| GlaI | GCGC | 9 cut(s) | 21, 153, 308, 632, 852, 1016, 1441, 1555, 1837 |
| GsaI | CCCAGC | 5 cut(s) | 540, 708, 1518, 1582, 1717 |
| GsuI | CTGGAG | 4 cut(s) | 539, 599, 1316, 1337 |
| HaeII | RGCGCY | 4 cut(s) | 23, 155, 854, 1557 |
| HapII | CCGG | 8 cut(s) | 399, 452, 569, 602, 719, 1613, 1631, 1700 |
| HgaI | GACGC | 4 cut(s) | 328, 482, 1086, 1563 |
| HhaI | GCGC | 9 cut(s) | 22, 154, 309, 633, 853, 1017, 1442, 1556, 1838 |
| Hin1I | GRCGYC | 4 cut(s) | 474, 851, 1097, 1574 |
| Hin1II | CATG | 4 cut(s) | 943, 1286, 1309, 1493 |
| Hin6I | GCGC | 9 cut(s) | 20, 152, 307, 631, 851, 1015, 1440, 1554, 1836 |
| HinP1I | GCGC | 9 cut(s) | 20, 152, 307, 631, 851, 1015, 1440, 1554, 1836 |
| HincII | GTYRAC | 2 cut(s) | 418, 782 |
| HindII | GTYRAC | 2 cut(s) | 418, 782 |
| HpaII | CCGG | 8 cut(s) | 399, 452, 569, 602, 719, 1613, 1631, 1700 |
| HphI | GGTGA | 7 cut(s) | 139, 388, 574, 1402, 1418, 1579, 1718 |
| Hpy166II | GTNNAC | 3 cut(s) | 418, 620, 782 |
| Hpy188I | TCNGA | 6 cut(s) | 353, 595, 675, 1738, 1800, 1822 |
| Hpy188III | TCNNGA | 5 cut(s) | 166, 569, 940, 1148, 1695 |
| Hpy8I | GTNNAC | 3 cut(s) | 418, 620, 782 |
| Hpy99I | CGWCG | 2 cut(s) | 265, 476 |
| HpyCH4III | ACNGT | 4 cut(s) | 64, 497, 559, 1473 |
| HpyCH4IV | ACGT | 5 cut(s) | 263, 433, 1234, 1266, 1530 |
| HpyCH4V | TGCA | 7 cut(s) | 79, 117, 533, 1226, 1232, 1246, 1360 |
| HpyF3I | CTNAG | 6 cut(s) | 549, 672, 1101, 1127, 1421, 1599 |
| HpySE526I | ACGT | 5 cut(s) | 263, 433, 1234, 1266, 1530 |
| Hsp92I | GRCGYC | 4 cut(s) | 474, 851, 1097, 1574 |
| Hsp92II | CATG | 4 cut(s) | 943, 1286, 1309, 1493 |
| HspAI | GCGC | 9 cut(s) | 20, 152, 307, 631, 851, 1015, 1440, 1554, 1836 |
| KasI | GGCGCC | 1 cut(s) | 850 |
| Kpn2I | TCCGGA | 1 cut(s) | 568 |
| KroI | GCCGGC | 3 cut(s) | 718, 1612, 1630 |
| KroNI | GCCGGC | 3 cut(s) | 720, 1614, 1632 |
| Kzo9I | GATC | 4 cut(s) | 162, 504, 1137, 1347 |
| LmnI | GCTCC | 6 cut(s) | 149, 256, 648, 712, 877, 1297 |
| LweI | GCATC | 4 cut(s) | 357, 1210, 1219, 1527 |
| MaeI | CTAG | 4 cut(s) | 738, 986, 1001, 1523 |
| MaeII | ACGT | 5 cut(s) | 263, 433, 1234, 1266, 1530 |
| MaeIII | GTNAC | 4 cut(s) | 340, 455, 1058, 1706 |
| MalI | GATC | 4 cut(s) | 164, 506, 1139, 1349 |
| MbiI | CCGCTC | 4 cut(s) | 299, 686, 982, 1120 |
| MboI | GATC | 4 cut(s) | 162, 504, 1137, 1347 |
| MflI | RGATCY | 1 cut(s) | 1137 |
| MhlI | GDGCHC | 3 cut(s) | 653, 835, 1522 |
| MlsI | TGGCCA | 2 cut(s) | 215, 1253 |
| MluCI | AATT | 5 cut(s) | 169, 230, 511, 959, 1178 |
| MluI | ACGCGT | 1 cut(s) | 320 |
| MluNI | TGGCCA | 2 cut(s) | 215, 1253 |
| Mly113I | GGCGCC | 1 cut(s) | 851 |
| MlyI | GAGTC | 9 cut(s) | 145, 173, 337, 737, 782, 1376, 1703, 1714, 1810 |
| MmeI | TCCRAC | 5 cut(s) | 258, 270, 727, 1716, 1829 |
| Mox20I | TGGCCA | 2 cut(s) | 215, 1253 |
| MreI | CGCCGGCG | 2 cut(s) | 1612, 1630 |
| MroI | TCCGGA | 1 cut(s) | 568 |
| MroNI | GCCGGC | 3 cut(s) | 718, 1612, 1630 |
| MscI | TGGCCA | 2 cut(s) | 215, 1253 |
| MseI | TTAA | 2 cut(s) | 273, 584 |
| MslI | CAYNNNNRTG | 2 cut(s) | 758, 975 |
| Msp20I | TGGCCA | 2 cut(s) | 215, 1253 |
| MspA1I | CMGCKG | 8 cut(s) | 536, 704, 878, 1261, 1363, 1454, 1594, 1717 |
| MspI | CCGG | 8 cut(s) | 399, 452, 569, 602, 719, 1613, 1631, 1700 |
| MspR9I | CCNGG | 7 cut(s) | 453, 518, 1091, 1112, 1142, 1378, 1760 |
| Mva1269I | GAATGC | 1 cut(s) | 1463 |
| MvaI | CCWGG | 6 cut(s) | 518, 1091, 1112, 1142, 1378, 1760 |
| MvnI | CGCG | 9 cut(s) | 322, 339, 463, 471, 631, 926, 1015, 1440, 1836 |
| NaeI | GCCGGC | 3 cut(s) | 720, 1614, 1632 |
| NarI | GGCGCC | 1 cut(s) | 851 |
| NciI | CCSGG | 1 cut(s) | 453 |
| NdeII | GATC | 4 cut(s) | 162, 504, 1137, 1347 |
| NgoMIV | GCCGGC | 3 cut(s) | 718, 1612, 1630 |
| NlaIII | CATG | 4 cut(s) | 943, 1286, 1309, 1493 |
| NmuCI | GTSAC | 3 cut(s) | 340, 1058, 1706 |
| NspI | RCATGY | 1 cut(s) | 1493 |
| OliI | CACNNNNGTG | 2 cut(s) | 758, 975 |
| PaeI | GCATGC | 1 cut(s) | 1493 |
| PaeR7I | CTCGAG | 1 cut(s) | 1773 |
| PagI | TCATGA | 1 cut(s) | 939 |
| PaqCI | CACCTGC | 1 cut(s) | 115 |
| PceI | AGGCCT | 1 cut(s) | 736 |
| PcsI | WCGNNNNNNNCGW | 3 cut(s) | 246, 430, 923 |
| PctI | GAATGC | 1 cut(s) | 1463 |
| PdiI | GCCGGC | 3 cut(s) | 720, 1614, 1632 |
| PfeI | GAWTC | 3 cut(s) | 565, 914, 1795 |
| Pfl23II | CGTACG | 1 cut(s) | 927 |
| PflFI | GACNNNGTC | 1 cut(s) | 1283 |
| PfoI | TCCNGGA | 1 cut(s) | 516 |
| PinAI | ACCGGT | 1 cut(s) | 398 |
| PleI | GAGTC | 9 cut(s) | 144, 173, 337, 736, 782, 1375, 1703, 1714, 1809 |
| PluTI | GGCGCC | 1 cut(s) | 854 |
| PmaCI | CACGTG | 2 cut(s) | 434, 1235 |
| PmlI | CACGTG | 2 cut(s) | 434, 1235 |
| PpsI | GAGTC | 9 cut(s) | 144, 173, 337, 736, 782, 1375, 1703, 1714, 1809 |
| Ppu21I | YACGTR | 2 cut(s) | 434, 1235 |
| PpuMI | RGGWCCY | 1 cut(s) | 201 |
| Psp5II | RGGWCCY | 1 cut(s) | 201 |
| Psp6I | CCWGG | 6 cut(s) | 516, 1089, 1110, 1140, 1376, 1758 |
| PspCI | CACGTG | 2 cut(s) | 434, 1235 |
| PspFI | CCCAGC | 5 cut(s) | 536, 704, 1514, 1578, 1713 |
| PspGI | CCWGG | 6 cut(s) | 516, 1089, 1110, 1140, 1376, 1758 |
| PspLI | CGTACG | 1 cut(s) | 927 |
| PspOMI | GGGCCC | 2 cut(s) | 831, 1518 |
| PspPPI | RGGWCCY | 1 cut(s) | 201 |
| PspXI | VCTCGAGB | 1 cut(s) | 1773 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 920, 952 |
| PstI | CTGCAG | 3 cut(s) | 119, 1228, 1362 |
| PstNI | CAGNNNCTG | 2 cut(s) | 357, 1111 |
| PsuI | RGATCY | 1 cut(s) | 1137 |
| PsyI | GACNNNGTC | 1 cut(s) | 1283 |
| PvuII | CAGCTG | 1 cut(s) | 536 |
| RsaI | GTAC | 2 cut(s) | 929, 1642 |
| RsaNI | GTAC | 2 cut(s) | 928, 1641 |
| RseI | CAYNNNNRTG | 2 cut(s) | 758, 975 |
| SalI | GTCGAC | 1 cut(s) | 416 |
| SaqAI | TTAA | 2 cut(s) | 273, 584 |
| Sau3AI | GATC | 4 cut(s) | 162, 504, 1137, 1347 |
| SchI | GAGTC | 9 cut(s) | 145, 173, 337, 737, 782, 1376, 1703, 1714, 1810 |
| ScrFI | CCNGG | 7 cut(s) | 453, 518, 1091, 1112, 1142, 1378, 1760 |
| SduI | GDGCHC | 3 cut(s) | 653, 835, 1522 |
| SfaNI | GCATC | 4 cut(s) | 357, 1210, 1219, 1527 |
| SfcI | CTRYAG | 3 cut(s) | 115, 1224, 1358 |
| SfoI | GGCGCC | 1 cut(s) | 852 |
| Sfr274I | CTCGAG | 1 cut(s) | 1773 |
| SgrAI | CRCCGGYG | 2 cut(s) | 1612, 1630 |
| SinI | GGWCC | 5 cut(s) | 201, 243, 493, 690, 1435 |
| SlaI | CTCGAG | 1 cut(s) | 1773 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 758, 975 |
| SmlI | CTYRAG | 3 cut(s) | 866, 1148, 1773 |
| SmoI | CTYRAG | 3 cut(s) | 866, 1148, 1773 |
| SphI | GCATGC | 1 cut(s) | 1493 |
| Sse9I | AATT | 5 cut(s) | 169, 230, 511, 959, 1178 |
| SseBI | AGGCCT | 1 cut(s) | 736 |
| SspDI | GGCGCC | 1 cut(s) | 850 |
| SspMI | CTAG | 4 cut(s) | 738, 986, 1001, 1523 |
| StuI | AGGCCT | 1 cut(s) | 736 |
| StyD4I | CCNGG | 7 cut(s) | 451, 516, 1089, 1110, 1140, 1376, 1758 |
| StyI | CCWWGG | 1 cut(s) | 1335 |
| TaaI | ACNGT | 4 cut(s) | 64, 497, 559, 1473 |
| TaiI | ACGT | 5 cut(s) | 266, 436, 1237, 1269, 1533 |
| TaqI | TCGA | 9 cut(s) | 165, 295, 417, 507, 731, 882, 1350, 1696, 1774 |
| TaqII | GACCGA | 1 cut(s) | 1046 |
| TasI | AATT | 5 cut(s) | 169, 230, 511, 959, 1178 |
| TfiI | GAWTC | 3 cut(s) | 565, 914, 1795 |
| Tru1I | TTAA | 2 cut(s) | 273, 584 |
| Tru9I | TTAA | 2 cut(s) | 273, 584 |
| TscAI | CASTG | 1 cut(s) | 703 |
| TseFI | GTSAC | 3 cut(s) | 340, 1058, 1706 |
| Tsp45I | GTSAC | 3 cut(s) | 340, 1058, 1706 |
| TspDTI | ATGAA | 2 cut(s) | 928, 1511 |
| TspGWI | ACGGA | 2 cut(s) | 725, 1057 |
| TspRI | CASTG | 1 cut(s) | 703 |
| Tth111I | GACNNNGTC | 1 cut(s) | 1283 |
| VpaK11BI | GGWCC | 5 cut(s) | 201, 243, 493, 690, 1435 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1316 |
| XapI | RAATTY | 3 cut(s) | 169, 230, 959 |
| XceI | RCATGY | 1 cut(s) | 1493 |
| XhoI | CTCGAG | 1 cut(s) | 1773 |
| XmiI | GTMKAC | 2 cut(s) | 417, 619 |
| XspI | CTAG | 4 cut(s) | 738, 986, 1001, 1523 |