No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 800 |
| Acc65I | GGTACC | 2 cut(s) | 1213, 1336 |
| AccB1I | GGYRCC | 4 cut(s) | 534, 1120, 1213, 1336 |
| AccBSI | CCGCTC | 4 cut(s) | 285, 597, 840, 891 |
| AccII | CGCG | 6 cut(s) | 29, 303, 657, 803, 851, 1012 |
| AclWI | GGATC | 2 cut(s) | 254, 914 |
| AcoI | YGGCCR | 4 cut(s) | 236, 770, 818, 950 |
| AcuI | CTGAAG | 2 cut(s) | 669, 1016 |
| AcvI | CACGTG | 1 cut(s) | 1300 |
| AcyI | GRCGYC | 2 cut(s) | 797, 1121 |
| AfaI | GTAC | 3 cut(s) | 1005, 1215, 1338 |
| AfiI | CCNNNNNNNGG | 9 cut(s) | 114, 153, 389, 827, 885, 944, 1210, 1248, 1255 |
| AflIII | ACRYGT | 3 cut(s) | 301, 849, 1103 |
| AgsI | TTSAA | 3 cut(s) | 1027, 1035, 1110 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 1352 |
| AleI | CACNNNNGTG | 1 cut(s) | 302 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 586, 618 |
| AluBI | AGCT | 7 cut(s) | 552, 627, 689, 810, 994, 1207, 1363 |
| AluI | AGCT | 7 cut(s) | 552, 627, 689, 810, 994, 1207, 1363 |
| Alw26I | GTCTC | 7 cut(s) | 124, 191, 720, 729, 858, 1177, 1339 |
| AlwI | GGATC | 2 cut(s) | 254, 914 |
| Ama87I | CYCGRG | 4 cut(s) | 127, 1088, 1221, 1325 |
| ApaI | GGGCCC | 2 cut(s) | 477, 1089 |
| ApeKI | GCWGC | 4 cut(s) | 624, 882, 927, 1226 |
| Asp718I | GGTACC | 2 cut(s) | 1213, 1336 |
| AspLEI | GCGC | 5 cut(s) | 141, 405, 659, 1123, 1320 |
| AsuC2I | CCSGG | 7 cut(s) | 11, 55, 390, 1089, 1090, 1326, 1327 |
| AsuHPI | GGTGA | 7 cut(s) | 132, 177, 208, 384, 555, 985, 1267 |
| AvaI | CYCGRG | 4 cut(s) | 127, 1088, 1221, 1325 |
| AvaII | GGWCC | 5 cut(s) | 51, 227, 307, 380, 1259 |
| BaeGI | GKGCMC | 2 cut(s) | 477, 1089 |
| BalI | TGGCCA | 2 cut(s) | 772, 820 |
| BanI | GGYRCC | 4 cut(s) | 534, 1120, 1213, 1336 |
| BanII | GRGCYC | 2 cut(s) | 477, 1089 |
| BbrPI | CACGTG | 1 cut(s) | 1300 |
| BbsI | GAAGAC | 2 cut(s) | 517, 1063 |
| BbvI | GCAGC | 4 cut(s) | 636, 869, 939, 1238 |
| BccI | CCATC | 7 cut(s) | 42, 196, 620, 829, 942, 1271, 1327 |
| BceAI | ACGGC | 5 cut(s) | 251, 440, 464, 526, 680 |
| BciVI | GTATCC | 1 cut(s) | 1183 |
| BcnI | CCSGG | 7 cut(s) | 11, 55, 390, 1089, 1090, 1326, 1327 |
| BcoDI | GTCTC | 7 cut(s) | 124, 191, 720, 729, 858, 1177, 1339 |
| BfaI | CTAG | 1 cut(s) | 364 |
| BfmI | CTRYAG | 2 cut(s) | 212, 883 |
| BfoI | RGCGCY | 3 cut(s) | 142, 406, 1124 |
| BfuI | GTATCC | 1 cut(s) | 1183 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 499 |
| BlpI | GCTNAGC | 1 cut(s) | 142 |
| Bme1390I | CCNGG | 7 cut(s) | 11, 55, 390, 1089, 1090, 1326, 1327 |
| Bme18I | GGWCC | 5 cut(s) | 51, 227, 307, 380, 1259 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 1352 |
| BmeT110I | CYCGRG | 4 cut(s) | 127, 1088, 1221, 1325 |
| BmrFI | CCNGG | 7 cut(s) | 11, 55, 390, 1089, 1090, 1326, 1327 |
| BmrI | ACTGGG | 1 cut(s) | 1346 |
| BmsI | GCATC | 3 cut(s) | 158, 164, 278 |
| BmuI | ACTGGG | 1 cut(s) | 1346 |
| BoxI | GACNNNNGTC | 1 cut(s) | 1189 |
| BpiI | GAAGAC | 2 cut(s) | 517, 1063 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 541, 573 |
| BpmI | CTGGAG | 5 cut(s) | 97, 427, 702, 1229, 1333 |
| Bpu10I | CCTNAGC | 1 cut(s) | 902 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 142 |
| BpuMI | CCSGG | 7 cut(s) | 11, 55, 390, 1089, 1090, 1326, 1327 |
| BsaAI | YACGTR | 1 cut(s) | 1300 |
| BsaHI | GRCGYC | 2 cut(s) | 797, 1121 |
| BsaI | GGTCTC | 1 cut(s) | 720 |
| BsaJI | CCNNGG | 7 cut(s) | 92, 152, 773, 801, 1067, 1088, 1325 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 70, 100, 443, 473, 586, 616 |
| Bsc4I | CCNNNNNNNGG | 9 cut(s) | 114, 153, 389, 827, 885, 944, 1210, 1248, 1255 |
| Bse118I | RCCGGY | 3 cut(s) | 238, 327, 1161 |
| Bse1I | ACTGG | 5 cut(s) | 147, 160, 183, 754, 1352 |
| BseDI | CCNNGG | 7 cut(s) | 92, 152, 773, 801, 1067, 1088, 1325 |
| BseGI | GGATG | 5 cut(s) | 207, 293, 953, 1245, 1338 |
| BseLI | CCNNNNNNNGG | 9 cut(s) | 114, 153, 389, 827, 885, 944, 1210, 1248, 1255 |
| BseMII | CTCAG | 3 cut(s) | 133, 979, 1157 |
| BseNI | ACTGG | 5 cut(s) | 147, 160, 183, 754, 1352 |
| BseRI | GAGGAG | 2 cut(s) | 370, 1262 |
| BseSI | GKGCMC | 2 cut(s) | 477, 1089 |
| BseX3I | CGGCCG | 1 cut(s) | 236 |
| BseXI | GCAGC | 4 cut(s) | 636, 869, 939, 1238 |
| BseYI | CCCAGC | 7 cut(s) | 107, 223, 268, 627, 966, 1081, 1203 |
| BsgI | GTGCAG | 2 cut(s) | 238, 946 |
| Bsh1236I | CGCG | 6 cut(s) | 29, 303, 657, 803, 851, 1012 |
| Bsh1285I | CGRYCG | 1 cut(s) | 239 |
| BshNI | GGYRCC | 4 cut(s) | 534, 1120, 1213, 1336 |
| BsiEI | CGRYCG | 1 cut(s) | 239 |
| BsiHKCI | CYCGRG | 4 cut(s) | 127, 1088, 1221, 1325 |
| BslFI | GGGAC | 3 cut(s) | 240, 844, 1245 |
| BslI | CCNNNNNNNGG | 9 cut(s) | 114, 153, 389, 827, 885, 944, 1210, 1248, 1255 |
| BsmAI | GTCTC | 7 cut(s) | 124, 191, 720, 729, 858, 1177, 1339 |
| BsmBI | CGTCTC | 2 cut(s) | 124, 858 |
| BsmFI | GGGAC | 3 cut(s) | 240, 844, 1245 |
| Bso31I | GGTCTC | 1 cut(s) | 720 |
| BsoBI | CYCGRG | 4 cut(s) | 127, 1088, 1221, 1325 |
| Bsp120I | GGGCCC | 2 cut(s) | 473, 1085 |
| Bsp1286I | GDGCHC | 2 cut(s) | 477, 1089 |
| Bsp143I | GATC | 4 cut(s) | 246, 706, 872, 906 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 142 |
| Bsp68I | TCGCGA | 1 cut(s) | 29 |
| BspCNI | CTCAG | 3 cut(s) | 134, 980, 1158 |
| BspFNI | CGCG | 6 cut(s) | 29, 303, 657, 803, 851, 1012 |
| BspMAI | CTGCAG | 1 cut(s) | 887 |
| BspPI | GGATC | 2 cut(s) | 254, 914 |
| BspT107I | GGYRCC | 4 cut(s) | 534, 1120, 1213, 1336 |
| BspTNI | GGTCTC | 1 cut(s) | 720 |
| BsrBI | CCGCTC | 4 cut(s) | 285, 597, 840, 891 |
| BsrFI | RCCGGY | 3 cut(s) | 238, 327, 1161 |
| BsrI | ACTGG | 5 cut(s) | 147, 160, 183, 754, 1352 |
| BssAI | RCCGGY | 3 cut(s) | 238, 327, 1161 |
| BssECI | CCNNGG | 7 cut(s) | 92, 152, 773, 801, 1067, 1088, 1325 |
| BssMI | GATC | 4 cut(s) | 246, 706, 872, 906 |
| BssNI | GRCGYC | 2 cut(s) | 797, 1121 |
| BssT1I | CCWWGG | 1 cut(s) | 773 |
| Bst4CI | ACNGT | 4 cut(s) | 117, 216, 578, 1023 |
| Bst6I | CTCTTC | 3 cut(s) | 440, 613, 697 |
| BstACI | GRCGYC | 2 cut(s) | 797, 1121 |
| BstBAI | YACGTR | 1 cut(s) | 1300 |
| BstC8I | GCNNGC | 8 cut(s) | 101, 221, 240, 293, 477, 622, 770, 808 |
| BstDEI | CTNAG | 4 cut(s) | 142, 902, 988, 1166 |
| BstDSI | CCRYGG | 1 cut(s) | 801 |
| BstEII | GGTNACC | 1 cut(s) | 978 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 883 |
| BstF5I | GGATG | 5 cut(s) | 207, 293, 953, 1245, 1338 |
| BstFNI | CGCG | 6 cut(s) | 29, 303, 657, 803, 851, 1012 |
| BstH2I | RGCGCY | 3 cut(s) | 142, 406, 1124 |
| BstHHI | GCGC | 5 cut(s) | 141, 405, 659, 1123, 1320 |
| BstKTI | GATC | 4 cut(s) | 249, 709, 875, 909 |
| BstMAI | GTCTC | 7 cut(s) | 124, 191, 720, 729, 858, 1177, 1339 |
| BstMBI | GATC | 4 cut(s) | 246, 706, 872, 906 |
| BstMCI | CGRYCG | 1 cut(s) | 239 |
| BstMWI | GCNNNNNNNGC | 9 cut(s) | 88, 177, 216, 499, 514, 888, 1015, 1127, 1162 |
| BstNSI | RCATGY | 1 cut(s) | 1107 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 1189 |
| BstPI | GGTNACC | 1 cut(s) | 978 |
| BstSCI | CCNGG | 7 cut(s) | 9, 53, 388, 1087, 1088, 1324, 1325 |
| BstSFI | CTRYAG | 2 cut(s) | 212, 883 |
| BstSLI | GKGCMC | 2 cut(s) | 477, 1089 |
| BstUI | CGCG | 6 cut(s) | 29, 303, 657, 803, 851, 1012 |
| BstV1I | GCAGC | 4 cut(s) | 636, 869, 939, 1238 |
| BstV2I | GAAGAC | 2 cut(s) | 517, 1063 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 304 |
| BstZI | CGGCCG | 1 cut(s) | 236 |
| BsuI | GTATCC | 1 cut(s) | 1183 |
| BtgI | CCRYGG | 1 cut(s) | 801 |
| BtgZI | GCGATG | 1 cut(s) | 61 |
| BtsCI | GGATG | 5 cut(s) | 207, 293, 953, 1245, 1338 |
| BtsIMutI | CAGTG | 5 cut(s) | 167, 221, 552, 1019, 1060 |
| BtuMI | TCGCGA | 1 cut(s) | 29 |
| Cac8I | GCNNGC | 8 cut(s) | 101, 221, 240, 293, 477, 622, 770, 808 |
| CfoI | GCGC | 5 cut(s) | 141, 405, 659, 1123, 1320 |
| Cfr10I | RCCGGY | 3 cut(s) | 238, 327, 1161 |
| Cfr42I | CCGCGG | 1 cut(s) | 804 |
| Cfr9I | CCCGGG | 2 cut(s) | 1088, 1325 |
| CseI | GACGC | 5 cut(s) | 40, 840, 1001, 1130, 1162 |
| Csp6I | GTAC | 3 cut(s) | 1004, 1214, 1337 |
| CviAII | CATG | 2 cut(s) | 84, 1104 |
| CviQI | GTAC | 3 cut(s) | 1004, 1214, 1337 |
| DdeI | CTNAG | 4 cut(s) | 142, 902, 988, 1166 |
| DinI | GGCGCC | 1 cut(s) | 1122 |
| DpnI | GATC | 4 cut(s) | 248, 708, 874, 908 |
| DpnII | GATC | 4 cut(s) | 246, 706, 872, 906 |
| DriI | GACNNNNNGTC | 1 cut(s) | 1352 |
| EaeI | YGGCCR | 4 cut(s) | 236, 770, 818, 950 |
| EagI | CGGCCG | 1 cut(s) | 236 |
| Eam1104I | CTCTTC | 3 cut(s) | 440, 613, 697 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 1352 |
| EarI | CTCTTC | 3 cut(s) | 440, 613, 697 |
| EciI | GGCGGA | 9 cut(s) | 73, 346, 747, 768, 793, 927, 1005, 1267, 1345 |
| EclXI | CGGCCG | 1 cut(s) | 236 |
| Eco130I | CCWWGG | 1 cut(s) | 773 |
| Eco24I | GRGCYC | 2 cut(s) | 477, 1089 |
| Eco31I | GGTCTC | 1 cut(s) | 720 |
| Eco47I | GGWCC | 5 cut(s) | 51, 227, 307, 380, 1259 |
| Eco52I | CGGCCG | 1 cut(s) | 236 |
| Eco57I | CTGAAG | 2 cut(s) | 669, 1016 |
| Eco72I | CACGTG | 1 cut(s) | 1300 |
| Eco88I | CYCGRG | 4 cut(s) | 127, 1088, 1221, 1325 |
| Eco91I | GGTNACC | 1 cut(s) | 978 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 883 |
| EcoO109I | RGGNCCY | 4 cut(s) | 227, 473, 1085, 1259 |
| EcoO65I | GGTNACC | 1 cut(s) | 978 |
| EcoT14I | CCWWGG | 1 cut(s) | 773 |
| EcoT38I | GRGCYC | 2 cut(s) | 477, 1089 |
| EgeI | GGCGCC | 1 cut(s) | 1122 |
| EheI | GGCGCC | 1 cut(s) | 1122 |
| ErhI | CCWWGG | 1 cut(s) | 773 |
| Esp3I | CGTCTC | 2 cut(s) | 124, 858 |
| FaeI | CATG | 2 cut(s) | 87, 1107 |
| FaqI | GGGAC | 3 cut(s) | 240, 844, 1245 |
| FatI | CATG | 2 cut(s) | 83, 1103 |
| FokI | GGATG | 5 cut(s) | 214, 300, 960, 1232, 1345 |
| FriOI | GRGCYC | 2 cut(s) | 477, 1089 |
| FspBI | CTAG | 1 cut(s) | 364 |
| GlaI | GCGC | 5 cut(s) | 140, 404, 658, 1122, 1319 |
| GsaI | CCCAGC | 7 cut(s) | 111, 227, 272, 631, 970, 1085, 1207 |
| GsuI | CTGGAG | 5 cut(s) | 97, 427, 702, 1229, 1333 |
| HaeII | RGCGCY | 3 cut(s) | 142, 406, 1124 |
| HgaI | GACGC | 5 cut(s) | 40, 840, 1001, 1130, 1162 |
| HhaI | GCGC | 5 cut(s) | 141, 405, 659, 1123, 1320 |
| Hin1I | GRCGYC | 2 cut(s) | 797, 1121 |
| Hin1II | CATG | 2 cut(s) | 87, 1107 |
| Hin6I | GCGC | 5 cut(s) | 139, 403, 657, 1121, 1318 |
| HinP1I | GCGC | 5 cut(s) | 139, 403, 657, 1121, 1318 |
| HinfI | GANTC | 6 cut(s) | 24, 430, 556, 934, 1269, 1347 |
| HphI | GGTGA | 7 cut(s) | 132, 177, 208, 384, 555, 985, 1267 |
| Hpy166II | GTNNAC | 3 cut(s) | 123, 563, 795 |
| Hpy188I | TCNGA | 7 cut(s) | 153, 251, 485, 711, 1268, 1290, 1358 |
| Hpy188III | TCNNGA | 5 cut(s) | 28, 76, 436, 719, 1312 |
| Hpy8I | GTNNAC | 3 cut(s) | 123, 563, 795 |
| Hpy99I | CGWCG | 3 cut(s) | 34, 666, 1290 |
| HpyCH4III | ACNGT | 4 cut(s) | 117, 216, 578, 1023 |
| HpyCH4IV | ACGT | 3 cut(s) | 133, 797, 1299 |
| HpyCH4V | TGCA | 5 cut(s) | 219, 324, 574, 885, 927 |
| HpyF10VI | GCNNNNNNNGC | 9 cut(s) | 88, 177, 216, 499, 514, 888, 1015, 1127, 1162 |
| HpyF3I | CTNAG | 4 cut(s) | 142, 902, 988, 1166 |
| HpySE526I | ACGT | 3 cut(s) | 133, 797, 1299 |
| Hsp92I | GRCGYC | 2 cut(s) | 797, 1121 |
| Hsp92II | CATG | 2 cut(s) | 87, 1107 |
| HspAI | GCGC | 5 cut(s) | 139, 403, 657, 1121, 1318 |
| KasI | GGCGCC | 1 cut(s) | 1120 |
| KflI | GGGWCCC | 2 cut(s) | 227, 1259 |
| KpnI | GGTACC | 2 cut(s) | 1217, 1340 |
| KroI | GCCGGC | 1 cut(s) | 238 |
| KroNI | GCCGGC | 1 cut(s) | 240 |
| KspI | CCGCGG | 1 cut(s) | 804 |
| Kzo9I | GATC | 4 cut(s) | 246, 706, 872, 906 |
| LmnI | GCTCC | 7 cut(s) | 282, 357, 507, 594, 837, 864, 888 |
| Lsp1109I | GCAGC | 4 cut(s) | 636, 869, 939, 1238 |
| LweI | GCATC | 3 cut(s) | 158, 164, 278 |
| MaeI | CTAG | 1 cut(s) | 364 |
| MaeII | ACGT | 3 cut(s) | 133, 797, 1299 |
| MaeIII | GTNAC | 7 cut(s) | 13, 345, 372, 784, 978, 1142, 1295 |
| MalI | GATC | 4 cut(s) | 248, 708, 874, 908 |
| MbiI | CCGCTC | 4 cut(s) | 285, 597, 840, 891 |
| MboI | GATC | 4 cut(s) | 246, 706, 872, 906 |
| MboII | GAAGA | 6 cut(s) | 457, 498, 522, 600, 714, 1068 |
| MfeI | CAATTG | 1 cut(s) | 668 |
| MhlI | GDGCHC | 2 cut(s) | 477, 1089 |
| MlsI | TGGCCA | 2 cut(s) | 772, 820 |
| MluCI | AATT | 2 cut(s) | 69, 668 |
| MluI | ACGCGT | 2 cut(s) | 301, 849 |
| MluNI | TGGCCA | 2 cut(s) | 772, 820 |
| Mly113I | GGCGCC | 1 cut(s) | 1121 |
| MlyI | GAGTC | 5 cut(s) | 33, 550, 943, 1263, 1341 |
| MmeI | TCCRAC | 2 cut(s) | 842, 1268 |
| Mox20I | TGGCCA | 2 cut(s) | 772, 820 |
| MroNI | GCCGGC | 1 cut(s) | 238 |
| MscI | TGGCCA | 2 cut(s) | 772, 820 |
| MseI | TTAA | 1 cut(s) | 1052 |
| MslI | CAYNNNNRTG | 3 cut(s) | 194, 302, 922 |
| Msp20I | TGGCCA | 2 cut(s) | 772, 820 |
| MspA1I | CMGCKG | 5 cut(s) | 627, 803, 930, 1207, 1229 |
| MspR9I | CCNGG | 7 cut(s) | 11, 55, 390, 1089, 1090, 1326, 1327 |
| MunI | CAATTG | 1 cut(s) | 668 |
| MvnI | CGCG | 6 cut(s) | 29, 303, 657, 803, 851, 1012 |
| MwoI | GCNNNNNNNGC | 9 cut(s) | 88, 177, 216, 499, 514, 888, 1015, 1127, 1162 |
| NaeI | GCCGGC | 1 cut(s) | 240 |
| NarI | GGCGCC | 1 cut(s) | 1121 |
| NciI | CCSGG | 7 cut(s) | 11, 55, 390, 1089, 1090, 1326, 1327 |
| NdeII | GATC | 4 cut(s) | 246, 706, 872, 906 |
| NgoMIV | GCCGGC | 1 cut(s) | 238 |
| NlaIII | CATG | 2 cut(s) | 87, 1107 |
| NmeAIII | GCCGAG | 2 cut(s) | 117, 670 |
| NmuCI | GTSAC | 5 cut(s) | 345, 372, 784, 1142, 1295 |
| NruI | TCGCGA | 1 cut(s) | 29 |
| NspI | RCATGY | 1 cut(s) | 1107 |
| OliI | CACNNNNGTG | 1 cut(s) | 302 |
| PciI | ACATGT | 1 cut(s) | 1103 |
| PdiI | GCCGGC | 1 cut(s) | 240 |
| PfeI | GAWTC | 1 cut(s) | 430 |
| PflFI | GACNNNGTC | 1 cut(s) | 337 |
| PleI | GAGTC | 5 cut(s) | 32, 550, 942, 1263, 1341 |
| PluTI | GGCGCC | 1 cut(s) | 1124 |
| PmaCI | CACGTG | 1 cut(s) | 1300 |
| PmlI | CACGTG | 1 cut(s) | 1300 |
| PpsI | GAGTC | 5 cut(s) | 32, 550, 942, 1263, 1341 |
| Ppu21I | YACGTR | 1 cut(s) | 1300 |
| PpuMI | RGGWCCY | 2 cut(s) | 227, 1259 |
| PscI | ACATGT | 1 cut(s) | 1103 |
| PshAI | GACNNNNGTC | 1 cut(s) | 1189 |
| Psp5II | RGGWCCY | 2 cut(s) | 227, 1259 |
| PspCI | CACGTG | 1 cut(s) | 1300 |
| PspEI | GGTNACC | 1 cut(s) | 978 |
| PspFI | CCCAGC | 7 cut(s) | 107, 223, 268, 627, 966, 1081, 1203 |
| PspOMI | GGGCCC | 2 cut(s) | 473, 1085 |
| PspPPI | RGGWCCY | 2 cut(s) | 227, 1259 |
| PstI | CTGCAG | 1 cut(s) | 887 |
| PsyI | GACNNNGTC | 1 cut(s) | 337 |
| PvuII | CAGCTG | 2 cut(s) | 627, 1207 |
| RruI | TCGCGA | 1 cut(s) | 29 |
| RsaI | GTAC | 3 cut(s) | 1005, 1215, 1338 |
| RsaNI | GTAC | 3 cut(s) | 1004, 1214, 1337 |
| RseI | CAYNNNNRTG | 3 cut(s) | 194, 302, 922 |
| SacII | CCGCGG | 1 cut(s) | 804 |
| SaqAI | TTAA | 1 cut(s) | 1052 |
| Sau3AI | GATC | 4 cut(s) | 246, 706, 872, 906 |
| SchI | GAGTC | 5 cut(s) | 33, 550, 943, 1263, 1341 |
| ScrFI | CCNGG | 7 cut(s) | 11, 55, 390, 1089, 1090, 1326, 1327 |
| SduI | GDGCHC | 2 cut(s) | 477, 1089 |
| SfaNI | GCATC | 3 cut(s) | 158, 164, 278 |
| SfcI | CTRYAG | 2 cut(s) | 212, 883 |
| SfoI | GGCGCC | 1 cut(s) | 1122 |
| Sfr303I | CCGCGG | 1 cut(s) | 804 |
| SgrBI | CCGCGG | 1 cut(s) | 804 |
| SinI | GGWCC | 5 cut(s) | 51, 227, 307, 380, 1259 |
| SmaI | CCCGGG | 2 cut(s) | 1090, 1327 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 194, 302, 922 |
| SrfI | GCCCGGGC | 1 cut(s) | 1090 |
| Sse9I | AATT | 2 cut(s) | 69, 668 |
| SspDI | GGCGCC | 1 cut(s) | 1120 |
| SspMI | CTAG | 1 cut(s) | 364 |
| StyD4I | CCNGG | 7 cut(s) | 9, 53, 388, 1087, 1088, 1324, 1325 |
| StyI | CCWWGG | 1 cut(s) | 773 |
| TaaI | ACNGT | 4 cut(s) | 117, 216, 578, 1023 |
| TaiI | ACGT | 3 cut(s) | 136, 800, 1302 |
| TaqI | TCGA | 2 cut(s) | 22, 760 |
| TaqII | GACCGA | 1 cut(s) | 1081 |
| TasI | AATT | 2 cut(s) | 69, 668 |
| TfiI | GAWTC | 1 cut(s) | 430 |
| Tru1I | TTAA | 1 cut(s) | 1052 |
| Tru9I | TTAA | 1 cut(s) | 1052 |
| TscAI | CASTG | 5 cut(s) | 167, 221, 552, 1026, 1067 |
| TseFI | GTSAC | 5 cut(s) | 345, 372, 784, 1142, 1295 |
| TseI | GCWGC | 4 cut(s) | 624, 882, 927, 1226 |
| Tsp45I | GTSAC | 5 cut(s) | 345, 372, 784, 1142, 1295 |
| TspDTI | ATGAA | 1 cut(s) | 860 |
| TspGWI | ACGGA | 1 cut(s) | 1274 |
| TspMI | CCCGGG | 2 cut(s) | 1088, 1325 |
| TspRI | CASTG | 5 cut(s) | 167, 221, 552, 1026, 1067 |
| Tth111I | GACNNNGTC | 1 cut(s) | 337 |
| VpaK11BI | GGWCC | 5 cut(s) | 51, 227, 307, 380, 1259 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 883 |
| XceI | RCATGY | 1 cut(s) | 1107 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 190 |
| XmaI | CCCGGG | 2 cut(s) | 1088, 1325 |
| XspI | CTAG | 1 cut(s) | 364 |
| ZraI | GACGTC | 1 cut(s) | 798 |