No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 326 |
| AatII | GACGTC | 1 cut(s) | 605 |
| Acc36I | ACCTGC | 1 cut(s) | 326 |
| Acc65I | GGTACC | 1 cut(s) | 590 |
| AccB1I | GGYRCC | 3 cut(s) | 18, 338, 590 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 384 |
| AccBSI | CCGCTC | 3 cut(s) | 16, 82, 474 |
| AccI | GTMKAC | 1 cut(s) | 171 |
| AccII | CGCG | 2 cut(s) | 57, 375 |
| AcuI | CTGAAG | 1 cut(s) | 564 |
| AcyI | GRCGYC | 2 cut(s) | 19, 602 |
| AfaI | GTAC | 1 cut(s) | 592 |
| AgsI | TTSAA | 4 cut(s) | 139, 214, 289, 364 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 606 |
| AhlI | ACTAGT | 1 cut(s) | 635 |
| AjnI | CCWGG | 2 cut(s) | 433, 552 |
| AluBI | AGCT | 2 cut(s) | 64, 131 |
| AluI | AGCT | 2 cut(s) | 64, 131 |
| Alw26I | GTCTC | 1 cut(s) | 553 |
| AoxI | GGCC | 4 cut(s) | 256, 267, 555, 646 |
| ApaI | GGGCCC | 1 cut(s) | 650 |
| ApeKI | GCWGC | 6 cut(s) | 152, 326, 421, 424, 446, 655 |
| Asp718I | GGTACC | 1 cut(s) | 590 |
| AspLEI | GCGC | 3 cut(s) | 21, 377, 574 |
| AspS9I | GGNCC | 5 cut(s) | 85, 256, 500, 646, 647 |
| AsuC2I | CCSGG | 1 cut(s) | 238 |
| AsuHPI | GGTGA | 1 cut(s) | 676 |
| AvaII | GGWCC | 2 cut(s) | 85, 500 |
| BaeGI | GKGCMC | 1 cut(s) | 650 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 582, 615 |
| BanI | GGYRCC | 3 cut(s) | 18, 338, 590 |
| BanII | GRGCYC | 1 cut(s) | 650 |
| BbvI | GCAGC | 6 cut(s) | 139, 338, 433, 433, 436, 667 |
| BccI | CCATC | 4 cut(s) | 40, 350, 506, 581 |
| BceAI | ACGGC | 2 cut(s) | 59, 260 |
| BciT130I | CCWGG | 2 cut(s) | 435, 554 |
| BcnI | CCSGG | 1 cut(s) | 238 |
| BcoDI | GTCTC | 1 cut(s) | 553 |
| BcuI | ACTAGT | 1 cut(s) | 635 |
| BfaI | CTAG | 2 cut(s) | 477, 636 |
| BfoI | RGCGCY | 1 cut(s) | 22 |
| BfuAI | ACCTGC | 1 cut(s) | 326 |
| Bme1390I | CCNGG | 3 cut(s) | 238, 435, 554 |
| Bme18I | GGWCC | 2 cut(s) | 85, 500 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 606 |
| BmgT120I | GGNCC | 5 cut(s) | 85, 256, 500, 646, 647 |
| BmiI | GGNNCC | 6 cut(s) | 20, 86, 340, 592, 648, 649 |
| BmrFI | CCNGG | 3 cut(s) | 238, 435, 554 |
| BmrI | ACTGGG | 1 cut(s) | 394 |
| BmsI | GCATC | 3 cut(s) | 31, 40, 457 |
| BmuI | ACTGGG | 1 cut(s) | 394 |
| BpmI | CTGGAG | 2 cut(s) | 137, 483 |
| BpuEI | CTTGAG | 1 cut(s) | 74 |
| BpuMI | CCSGG | 1 cut(s) | 238 |
| BsaAI | YACGTR | 1 cut(s) | 106 |
| BsaHI | GRCGYC | 2 cut(s) | 19, 602 |
| BsaJI | CCNNGG | 6 cut(s) | 27, 55, 156, 276, 434, 552 |
| Bse118I | RCCGGY | 1 cut(s) | 661 |
| Bse1I | ACTGG | 2 cut(s) | 389, 408 |
| BseBI | CCWGG | 2 cut(s) | 435, 554 |
| BseDI | CCNNGG | 6 cut(s) | 27, 55, 156, 276, 434, 552 |
| BseGI | GGATG | 3 cut(s) | 55, 174, 514 |
| BseMII | CTCAG | 1 cut(s) | 413 |
| BseNI | ACTGG | 2 cut(s) | 389, 408 |
| BseSI | GKGCMC | 1 cut(s) | 650 |
| BseXI | GCAGC | 6 cut(s) | 139, 338, 433, 433, 436, 667 |
| BseYI | CCCAGC | 2 cut(s) | 241, 651 |
| Bsh1236I | CGCG | 2 cut(s) | 57, 375 |
| BshFI | GGCC | 4 cut(s) | 258, 269, 557, 648 |
| BshNI | GGYRCC | 3 cut(s) | 18, 338, 590 |
| BsiSI | CCGG | 4 cut(s) | 238, 458, 503, 662 |
| BslFI | GGGAC | 2 cut(s) | 98, 594 |
| BsmAI | GTCTC | 1 cut(s) | 553 |
| BsmFI | GGGAC | 2 cut(s) | 98, 594 |
| BsnI | GGCC | 4 cut(s) | 258, 269, 557, 648 |
| Bsp120I | GGGCCC | 1 cut(s) | 646 |
| Bsp1286I | GDGCHC | 1 cut(s) | 650 |
| BspANI | GGCC | 4 cut(s) | 258, 269, 557, 648 |
| BspCNI | CTCAG | 1 cut(s) | 412 |
| BspFNI | CGCG | 2 cut(s) | 57, 375 |
| BspLI | GGNNCC | 6 cut(s) | 20, 86, 340, 592, 648, 649 |
| BspMI | ACCTGC | 1 cut(s) | 326 |
| BspT107I | GGYRCC | 3 cut(s) | 18, 338, 590 |
| BsrBI | CCGCTC | 3 cut(s) | 16, 82, 474 |
| BsrFI | RCCGGY | 1 cut(s) | 661 |
| BsrI | ACTGG | 2 cut(s) | 389, 408 |
| BssAI | RCCGGY | 1 cut(s) | 661 |
| BssECI | CCNNGG | 6 cut(s) | 27, 55, 156, 276, 434, 552 |
| BssNI | GRCGYC | 2 cut(s) | 19, 602 |
| BssT1I | CCWWGG | 2 cut(s) | 27, 156 |
| Bst2UI | CCWGG | 2 cut(s) | 435, 554 |
| Bst4CI | ACNGT | 1 cut(s) | 500 |
| BstACI | GRCGYC | 2 cut(s) | 19, 602 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 430 |
| BstBAI | YACGTR | 1 cut(s) | 106 |
| BstC8I | GCNNGC | 5 cut(s) | 55, 62, 312, 472, 531 |
| BstDEI | CTNAG | 1 cut(s) | 399 |
| BstDSI | CCRYGG | 2 cut(s) | 55, 276 |
| BstEII | GGTNACC | 1 cut(s) | 664 |
| BstENI | CCTNNNNNAGG | 3 cut(s) | 26, 320, 432 |
| BstF5I | GGATG | 3 cut(s) | 55, 174, 514 |
| BstFNI | CGCG | 2 cut(s) | 57, 375 |
| BstH2I | RGCGCY | 1 cut(s) | 22 |
| BstHHI | GCGC | 3 cut(s) | 21, 377, 574 |
| BstMAI | GTCTC | 1 cut(s) | 553 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 50, 203, 269, 332, 430, 452, 467, 526 |
| BstNI | CCWGG | 2 cut(s) | 435, 554 |
| BstPI | GGTNACC | 1 cut(s) | 664 |
| BstSCI | CCNGG | 3 cut(s) | 236, 433, 552 |
| BstSLI | GKGCMC | 1 cut(s) | 650 |
| BstUI | CGCG | 2 cut(s) | 57, 375 |
| BstV1I | GCAGC | 6 cut(s) | 139, 338, 433, 433, 436, 667 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 565 |
| BsuRI | GGCC | 4 cut(s) | 258, 269, 557, 648 |
| BtgI | CCRYGG | 2 cut(s) | 55, 276 |
| BtgZI | GCGATG | 3 cut(s) | 54, 59, 328 |
| BtsCI | GGATG | 3 cut(s) | 55, 174, 514 |
| BtsI | GCAGTG | 1 cut(s) | 487 |
| BtsIMutI | CAGTG | 1 cut(s) | 487 |
| BveI | ACCTGC | 1 cut(s) | 326 |
| Cac8I | GCNNGC | 5 cut(s) | 55, 62, 312, 472, 531 |
| CfoI | GCGC | 3 cut(s) | 21, 377, 574 |
| Cfr10I | RCCGGY | 1 cut(s) | 661 |
| Cfr13I | GGNCC | 5 cut(s) | 85, 256, 500, 646, 647 |
| Cfr42I | CCGCGG | 1 cut(s) | 58 |
| CpoI | CGGWCCG | 1 cut(s) | 500 |
| Csp6I | GTAC | 1 cut(s) | 591 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 601, 636 |
| CspI | CGGWCCG | 1 cut(s) | 500 |
| CviAII | CATG | 4 cut(s) | 111, 260, 565, 643 |
| CviQI | GTAC | 1 cut(s) | 591 |
| DdeI | CTNAG | 1 cut(s) | 399 |
| DinI | GGCGCC | 1 cut(s) | 20 |
| DriI | GACNNNNNGTC | 1 cut(s) | 606 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 606 |
| EciI | GGCGGA | 4 cut(s) | 20, 181, 286, 521 |
| Eco130I | CCWWGG | 2 cut(s) | 27, 156 |
| Eco24I | GRGCYC | 1 cut(s) | 650 |
| Eco47I | GGWCC | 2 cut(s) | 85, 500 |
| Eco57I | CTGAAG | 1 cut(s) | 564 |
| Eco91I | GGTNACC | 1 cut(s) | 664 |
| EcoNI | CCTNNNNNAGG | 3 cut(s) | 26, 320, 432 |
| EcoO109I | RGGNCCY | 2 cut(s) | 85, 647 |
| EcoO65I | GGTNACC | 1 cut(s) | 664 |
| EcoRII | CCWGG | 2 cut(s) | 433, 552 |
| EcoT14I | CCWWGG | 2 cut(s) | 27, 156 |
| EcoT38I | GRGCYC | 1 cut(s) | 650 |
| EgeI | GGCGCC | 1 cut(s) | 20 |
| EheI | GGCGCC | 1 cut(s) | 20 |
| ErhI | CCWWGG | 2 cut(s) | 27, 156 |
| FaeI | CATG | 4 cut(s) | 114, 263, 568, 646 |
| FaiI | YATR | 9 cut(s) | 112, 128, 261, 304, 306, 566, 576, 644, 696 |
| FaqI | GGGAC | 2 cut(s) | 98, 594 |
| FatI | CATG | 4 cut(s) | 110, 259, 564, 642 |
| FauI | CCCGC | 4 cut(s) | 62, 75, 434, 479 |
| FblI | GTMKAC | 1 cut(s) | 171 |
| FokI | GGATG | 3 cut(s) | 62, 161, 521 |
| FriOI | GRGCYC | 1 cut(s) | 650 |
| FspBI | CTAG | 2 cut(s) | 477, 636 |
| GlaI | GCGC | 3 cut(s) | 20, 376, 573 |
| GsaI | CCCAGC | 2 cut(s) | 245, 655 |
| GsuI | CTGGAG | 2 cut(s) | 137, 483 |
| HaeII | RGCGCY | 1 cut(s) | 22 |
| HaeIII | GGCC | 4 cut(s) | 258, 269, 557, 648 |
| HapII | CCGG | 4 cut(s) | 238, 458, 503, 662 |
| HhaI | GCGC | 3 cut(s) | 21, 377, 574 |
| Hin1I | GRCGYC | 2 cut(s) | 19, 602 |
| Hin1II | CATG | 4 cut(s) | 114, 263, 568, 646 |
| Hin6I | GCGC | 3 cut(s) | 19, 375, 572 |
| HinP1I | GCGC | 3 cut(s) | 19, 375, 572 |
| HincII | GTYRAC | 1 cut(s) | 172 |
| HindII | GTYRAC | 1 cut(s) | 172 |
| HinfI | GANTC | 4 cut(s) | 188, 281, 523, 607 |
| HpaII | CCGG | 4 cut(s) | 238, 458, 503, 662 |
| HphI | GGTGA | 1 cut(s) | 676 |
| Hpy166II | GTNNAC | 1 cut(s) | 172 |
| Hpy188I | TCNGA | 2 cut(s) | 544, 586 |
| Hpy8I | GTNNAC | 1 cut(s) | 172 |
| Hpy99I | CGWCG | 2 cut(s) | 418, 607 |
| HpyAV | CCTTC | 3 cut(s) | 133, 160, 247 |
| HpyCH4III | ACNGT | 1 cut(s) | 500 |
| HpyCH4IV | ACGT | 3 cut(s) | 9, 105, 602 |
| HpyCH4V | TGCA | 3 cut(s) | 181, 263, 642 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 50, 203, 269, 332, 430, 452, 467, 526 |
| HpyF3I | CTNAG | 1 cut(s) | 399 |
| HpySE526I | ACGT | 3 cut(s) | 9, 105, 602 |
| Hsp92I | GRCGYC | 2 cut(s) | 19, 602 |
| Hsp92II | CATG | 4 cut(s) | 114, 263, 568, 646 |
| HspAI | GCGC | 3 cut(s) | 19, 375, 572 |
| KasI | GGCGCC | 1 cut(s) | 18 |
| KpnI | GGTACC | 1 cut(s) | 594 |
| KspI | CCGCGG | 1 cut(s) | 58 |
| LmnI | GCTCC | 4 cut(s) | 118, 142, 460, 694 |
| Lsp1109I | GCAGC | 6 cut(s) | 139, 338, 433, 433, 436, 667 |
| LweI | GCATC | 3 cut(s) | 31, 40, 457 |
| MaeI | CTAG | 2 cut(s) | 477, 636 |
| MaeII | ACGT | 3 cut(s) | 9, 105, 602 |
| MaeIII | GTNAC | 2 cut(s) | 598, 664 |
| MbiI | CCGCTC | 3 cut(s) | 16, 82, 474 |
| MboII | GAAGA | 2 cut(s) | 226, 686 |
| MhlI | GDGCHC | 1 cut(s) | 650 |
| Mly113I | GGCGCC | 1 cut(s) | 19 |
| MlyI | GAGTC | 3 cut(s) | 197, 517, 616 |
| MmeI | TCCRAC | 1 cut(s) | 201 |
| MnlI | CCTC | 6 cut(s) | 98, 217, 259, 316, 406, 411 |
| MspA1I | CMGCKG | 3 cut(s) | 57, 520, 529 |
| MspI | CCGG | 4 cut(s) | 238, 458, 503, 662 |
| MspR9I | CCNGG | 3 cut(s) | 238, 435, 554 |
| MvaI | CCWGG | 2 cut(s) | 435, 554 |
| MvnI | CGCG | 2 cut(s) | 57, 375 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 50, 203, 269, 332, 430, 452, 467, 526 |
| NarI | GGCGCC | 1 cut(s) | 19 |
| NciI | CCSGG | 1 cut(s) | 238 |
| NlaIII | CATG | 4 cut(s) | 114, 263, 568, 646 |
| NlaIV | GGNNCC | 6 cut(s) | 20, 86, 340, 592, 648, 649 |
| NmuCI | GTSAC | 2 cut(s) | 598, 664 |
| PaqCI | CACCTGC | 1 cut(s) | 326 |
| PfeI | GAWTC | 1 cut(s) | 281 |
| PflFI | GACNNNGTC | 1 cut(s) | 386 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 384 |
| PleI | GAGTC | 3 cut(s) | 196, 517, 615 |
| PluTI | GGCGCC | 1 cut(s) | 22 |
| PpsI | GAGTC | 3 cut(s) | 196, 517, 615 |
| Ppu21I | YACGTR | 1 cut(s) | 106 |
| PpuMI | RGGWCCY | 1 cut(s) | 85 |
| Psp5II | RGGWCCY | 1 cut(s) | 85 |
| Psp6I | CCWGG | 2 cut(s) | 433, 552 |
| PspEI | GGTNACC | 1 cut(s) | 664 |
| PspFI | CCCAGC | 2 cut(s) | 241, 651 |
| PspGI | CCWGG | 2 cut(s) | 433, 552 |
| PspN4I | GGNNCC | 6 cut(s) | 20, 86, 340, 592, 648, 649 |
| PspOMI | GGGCCC | 1 cut(s) | 646 |
| PspPI | GGNCC | 5 cut(s) | 85, 256, 500, 646, 647 |
| PspPPI | RGGWCCY | 1 cut(s) | 85 |
| PsyI | GACNNNGTC | 1 cut(s) | 386 |
| RsaI | GTAC | 1 cut(s) | 592 |
| RsaNI | GTAC | 1 cut(s) | 591 |
| Rsr2I | CGGWCCG | 1 cut(s) | 500 |
| RsrII | CGGWCCG | 1 cut(s) | 500 |
| SacII | CCGCGG | 1 cut(s) | 58 |
| SalI | GTCGAC | 1 cut(s) | 170 |
| Sau96I | GGNCC | 5 cut(s) | 85, 256, 500, 646, 647 |
| SchI | GAGTC | 3 cut(s) | 197, 517, 616 |
| ScrFI | CCNGG | 3 cut(s) | 238, 435, 554 |
| SduI | GDGCHC | 1 cut(s) | 650 |
| SetI | ASST | 9 cut(s) | 12, 33, 66, 90, 108, 133, 171, 340, 605 |
| SfaNI | GCATC | 3 cut(s) | 31, 40, 457 |
| SfoI | GGCGCC | 1 cut(s) | 20 |
| Sfr303I | CCGCGG | 1 cut(s) | 58 |
| SgrAI | CRCCGGYG | 1 cut(s) | 661 |
| SgrBI | CCGCGG | 1 cut(s) | 58 |
| SinI | GGWCC | 2 cut(s) | 85, 500 |
| SmlI | CTYRAG | 1 cut(s) | 89 |
| SmoI | CTYRAG | 1 cut(s) | 89 |
| SpeI | ACTAGT | 1 cut(s) | 635 |
| SspDI | GGCGCC | 1 cut(s) | 18 |
| SspMI | CTAG | 2 cut(s) | 477, 636 |
| StyD4I | CCNGG | 3 cut(s) | 236, 433, 552 |
| StyI | CCWWGG | 2 cut(s) | 27, 156 |
| TaaI | ACNGT | 1 cut(s) | 500 |
| TaiI | ACGT | 3 cut(s) | 12, 108, 605 |
| TaqI | TCGA | 3 cut(s) | 171, 416, 605 |
| TaqII | GACCGA | 1 cut(s) | 570 |
| TauI | GCSGC | 6 cut(s) | 19, 60, 197, 272, 275, 661 |
| TfiI | GAWTC | 1 cut(s) | 281 |
| TscAI | CASTG | 1 cut(s) | 487 |
| TseFI | GTSAC | 2 cut(s) | 598, 664 |
| TseI | GCWGC | 6 cut(s) | 152, 326, 421, 424, 446, 655 |
| Tsp45I | GTSAC | 2 cut(s) | 598, 664 |
| TspDTI | ATGAA | 2 cut(s) | 553, 687 |
| TspRI | CASTG | 1 cut(s) | 487 |
| Tth111I | GACNNNGTC | 1 cut(s) | 386 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 384 |
| VpaK11BI | GGWCC | 2 cut(s) | 85, 500 |
| XagI | CCTNNNNNAGG | 3 cut(s) | 26, 320, 432 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 349 |
| XmiI | GTMKAC | 1 cut(s) | 171 |
| XspI | CTAG | 2 cut(s) | 477, 636 |
| ZraI | GACGTC | 1 cut(s) | 603 |