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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 23 |
| AarI | CACCTGC | 1 cut(s) | 792 |
| Acc36I | ACCTGC | 1 cut(s) | 792 |
| AccB1I | GGYRCC | 3 cut(s) | 1039, 2369, 2462 |
| AccB7I | CCANNNNNTGG | 4 cut(s) | 534, 919, 2379, 2440 |
| AccBSI | CCGCTC | 4 cut(s) | 1921, 2059, 2243, 2579 |
| AccII | CGCG | 4 cut(s) | 1261, 1263, 1293, 2094 |
| AccIII | TCCGGA | 1 cut(s) | 48 |
| AclWI | GGATC | 6 cut(s) | 345, 383, 1282, 1295, 2187, 2596 |
| AcsI | RAATTY | 3 cut(s) | 929, 1157, 1874 |
| AcuI | CTGAAG | 4 cut(s) | 1082, 1915, 2195, 2378 |
| AcvI | CACGTG | 1 cut(s) | 76 |
| AcyI | GRCGYC | 2 cut(s) | 32, 2390 |
| AfeI | AGCGCT | 1 cut(s) | 1668 |
| AflIII | ACRYGT | 2 cut(s) | 75, 963 |
| AgsI | TTSAA | 6 cut(s) | 199, 260, 515, 1023, 2041, 2412 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 854 |
| AjiI | CACGTC | 2 cut(s) | 1756, 2125 |
| AjnI | CCWGG | 3 cut(s) | 491, 533, 2147 |
| Alw21I | GWGCWC | 2 cut(s) | 864, 1581 |
| Alw26I | GTCTC | 3 cut(s) | 1754, 2149, 2548 |
| Alw44I | GTGCAC | 1 cut(s) | 860 |
| AlwI | GGATC | 6 cut(s) | 345, 383, 1282, 1295, 2187, 2596 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 2521 |
| Ama87I | CYCGRG | 2 cut(s) | 2049, 2574 |
| Aor13HI | TCCGGA | 1 cut(s) | 48 |
| Aor51HI | AGCGCT | 1 cut(s) | 1668 |
| AoxI | GGCC | 8 cut(s) | 934, 1181, 1240, 1495, 1797, 1826, 1989, 2328 |
| ApaLI | GTGCAC | 1 cut(s) | 860 |
| ApeKI | GCWGC | 8 cut(s) | 1561, 1664, 2033, 2044, 2062, 2189, 2267, 2353 |
| ApoI | RAATTY | 3 cut(s) | 929, 1157, 1874 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1527, 1559 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 271 |
| AspLEI | GCGC | 7 cut(s) | 293, 985, 1263, 1441, 1618, 1669, 1956 |
| AspS9I | GGNCC | 6 cut(s) | 1077, 1240, 1496, 1798, 1826, 2619 |
| AsuC2I | CCSGG | 4 cut(s) | 415, 789, 2050, 2051 |
| AsuHPI | GGTGA | 5 cut(s) | 307, 673, 1951, 2218, 2234 |
| AsuNHI | GCTAGC | 2 cut(s) | 380, 641 |
| AvaI | CYCGRG | 2 cut(s) | 2049, 2574 |
| AvaII | GGWCC | 2 cut(s) | 1077, 2619 |
| BaeGI | GKGCMC | 5 cut(s) | 75, 864, 1448, 2001, 2467 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 705, 738 |
| BamHI | GGATCC | 1 cut(s) | 1287 |
| BanI | GGYRCC | 3 cut(s) | 1039, 2369, 2462 |
| BanII | GRGCYC | 1 cut(s) | 1378 |
| BauI | CACGAG | 2 cut(s) | 1371, 2613 |
| BbrPI | CACGTG | 1 cut(s) | 76 |
| BbsI | GAAGAC | 3 cut(s) | 187, 1411, 2400 |
| Bbv12I | GWGCWC | 2 cut(s) | 864, 1581 |
| BbvCI | CCTCAGC | 4 cut(s) | 1401, 2202, 2457, 2511 |
| BbvI | GCAGC | 8 cut(s) | 1573, 1676, 2045, 2056, 2074, 2176, 2279, 2340 |
| BccI | CCATC | 4 cut(s) | 973, 1091, 1095, 1654 |
| BceAI | ACGGC | 3 cut(s) | 839, 1175, 2096 |
| BciT130I | CCWGG | 3 cut(s) | 493, 535, 2149 |
| BciVI | GTATCC | 1 cut(s) | 259 |
| BclI | TGATCA | 1 cut(s) | 1969 |
| BcnI | CCSGG | 4 cut(s) | 415, 789, 2050, 2051 |
| BcoDI | GTCTC | 3 cut(s) | 1754, 2149, 2548 |
| BfmI | CTRYAG | 3 cut(s) | 276, 480, 2265 |
| BfoI | RGCGCY | 5 cut(s) | 294, 986, 1442, 1619, 1670 |
| BfuAI | ACCTGC | 1 cut(s) | 792 |
| BfuI | GTATCC | 1 cut(s) | 259 |
| BglII | AGATCT | 2 cut(s) | 269, 1321 |
| BlpI | GCTNAGC | 1 cut(s) | 2066 |
| Bme1390I | CCNGG | 7 cut(s) | 415, 493, 535, 789, 2050, 2051, 2149 |
| Bme18I | GGWCC | 2 cut(s) | 1077, 2619 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 854 |
| BmeT110I | CYCGRG | 2 cut(s) | 2049, 2574 |
| BmgBI | CACGTC | 2 cut(s) | 1756, 2125 |
| BmgT120I | GGNCC | 6 cut(s) | 1077, 1240, 1496, 1798, 1826, 2619 |
| BmrFI | CCNGG | 7 cut(s) | 415, 493, 535, 789, 2050, 2051, 2149 |
| BmrI | ACTGGG | 2 cut(s) | 1724, 2389 |
| BmsI | GCATC | 4 cut(s) | 580, 1489, 1735, 2077 |
| BmtI | GCTAGC | 2 cut(s) | 384, 645 |
| BmuI | ACTGGG | 2 cut(s) | 1724, 2389 |
| BpiI | GAAGAC | 3 cut(s) | 187, 1411, 2400 |
| BpmI | CTGGAG | 5 cut(s) | 603, 632, 896, 2131, 2237 |
| Bpu10I | CCTNAGC | 4 cut(s) | 1401, 2202, 2457, 2511 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 2066 |
| BpuEI | CTTGAG | 2 cut(s) | 1400, 1910 |
| BpuMI | CCSGG | 4 cut(s) | 415, 789, 2050, 2051 |
| BsaAI | YACGTR | 1 cut(s) | 76 |
| BsaHI | GRCGYC | 2 cut(s) | 32, 2390 |
| BsaI | GGTCTC | 1 cut(s) | 2548 |
| BsaWI | WCCGGW | 2 cut(s) | 48, 1007 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 43, 73, 2129, 2159, 2509, 2539 |
| Bse118I | RCCGGY | 1 cut(s) | 1510 |
| Bse1I | ACTGG | 5 cut(s) | 1276, 1556, 1730, 2331, 2384 |
| Bse3DI | GCAATG | 2 cut(s) | 1546, 2199 |
| BseAI | TCCGGA | 1 cut(s) | 48 |
| BseBI | CCWGG | 3 cut(s) | 493, 535, 2149 |
| BseGI | GGATG | 5 cut(s) | 342, 595, 826, 1106, 1747 |
| BseMI | GCAATG | 2 cut(s) | 1546, 2199 |
| BseNI | ACTGG | 5 cut(s) | 1276, 1556, 1730, 2331, 2384 |
| BseRI | GAGGAG | 3 cut(s) | 629, 1751, 2087 |
| BseSI | GKGCMC | 5 cut(s) | 75, 864, 1448, 2001, 2467 |
| BseXI | GCAGC | 8 cut(s) | 1573, 1676, 2045, 2056, 2074, 2176, 2279, 2340 |
| BseYI | CCCAGC | 3 cut(s) | 622, 1341, 1924 |
| BsgI | GTGCAG | 4 cut(s) | 1536, 1538, 1580, 1856 |
| Bsh1236I | CGCG | 4 cut(s) | 1261, 1263, 1293, 2094 |
| Bsh1285I | CGRYCG | 1 cut(s) | 809 |
| BshFI | GGCC | 8 cut(s) | 936, 1183, 1242, 1497, 1799, 1828, 1991, 2330 |
| BshNI | GGYRCC | 3 cut(s) | 1039, 2369, 2462 |
| BsiEI | CGRYCG | 1 cut(s) | 809 |
| BsiHKAI | GWGCWC | 2 cut(s) | 864, 1581 |
| BsiHKCI | CYCGRG | 2 cut(s) | 2049, 2574 |
| BsiSI | CCGG | 9 cut(s) | 49, 414, 789, 1008, 1511, 1829, 2050, 2120, 2498 |
| BslFI | GGGAC | 5 cut(s) | 1090, 1529, 1661, 2263, 2377 |
| BsmAI | GTCTC | 3 cut(s) | 1754, 2149, 2548 |
| BsmFI | GGGAC | 5 cut(s) | 1090, 1529, 1661, 2263, 2377 |
| BsmI | GAATGC | 1 cut(s) | 1129 |
| BsnI | GGCC | 8 cut(s) | 936, 1183, 1242, 1497, 1799, 1828, 1991, 2330 |
| Bso31I | GGTCTC | 1 cut(s) | 2548 |
| BsoBI | CYCGRG | 2 cut(s) | 2049, 2574 |
| Bsp1286I | GDGCHC | 7 cut(s) | 75, 864, 1378, 1448, 1581, 2001, 2467 |
| Bsp13I | TCCGGA | 1 cut(s) | 48 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 2066 |
| Bsp19I | CCATGG | 1 cut(s) | 546 |
| BspANI | GGCC | 8 cut(s) | 936, 1183, 1242, 1497, 1799, 1828, 1991, 2330 |
| BspEI | TCCGGA | 1 cut(s) | 48 |
| BspFNI | CGCG | 4 cut(s) | 1261, 1263, 1293, 2094 |
| BspMAI | CTGCAG | 2 cut(s) | 484, 2269 |
| BspMI | ACCTGC | 1 cut(s) | 792 |
| BspOI | GCTAGC | 2 cut(s) | 384, 645 |
| BspPI | GGATC | 6 cut(s) | 345, 383, 1282, 1295, 2187, 2596 |
| BspT107I | GGYRCC | 3 cut(s) | 1039, 2369, 2462 |
| BspTNI | GGTCTC | 1 cut(s) | 2548 |
| BsrBI | CCGCTC | 4 cut(s) | 1921, 2059, 2243, 2579 |
| BsrDI | GCAATG | 2 cut(s) | 1546, 2199 |
| BsrFI | RCCGGY | 1 cut(s) | 1510 |
| BsrI | ACTGG | 5 cut(s) | 1276, 1556, 1730, 2331, 2384 |
| BssAI | RCCGGY | 1 cut(s) | 1510 |
| BssNI | GRCGYC | 2 cut(s) | 32, 2390 |
| BssSI | CACGAG | 2 cut(s) | 1371, 2613 |
| BssT1I | CCWWGG | 5 cut(s) | 546, 880, 1705, 1806, 2434 |
| Bst2BI | CACGAG | 2 cut(s) | 1371, 2613 |
| Bst2UI | CCWGG | 3 cut(s) | 493, 535, 2149 |
| Bst4CI | ACNGT | 7 cut(s) | 83, 713, 748, 1027, 1417, 1816, 1822 |
| Bst6I | CTCTTC | 5 cut(s) | 216, 278, 1263, 1910, 2204 |
| BstACI | GRCGYC | 2 cut(s) | 32, 2390 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 2198, 2521 |
| BstBAI | YACGTR | 1 cut(s) | 76 |
| BstDSI | CCRYGG | 5 cut(s) | 546, 1026, 1291, 1461, 2092 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 1170, 2174 |
| BstF5I | GGATG | 5 cut(s) | 342, 595, 826, 1106, 1747 |
| BstFNI | CGCG | 4 cut(s) | 1261, 1263, 1293, 2094 |
| BstH2I | RGCGCY | 5 cut(s) | 294, 986, 1442, 1619, 1670 |
| BstHHI | GCGC | 7 cut(s) | 293, 985, 1263, 1441, 1618, 1669, 1956 |
| BstMAI | GTCTC | 3 cut(s) | 1754, 2149, 2548 |
| BstMCI | CGRYCG | 1 cut(s) | 809 |
| BstNI | CCWGG | 3 cut(s) | 493, 535, 2149 |
| BstNSI | RCATGY | 3 cut(s) | 854, 967, 1388 |
| BstSCI | CCNGG | 7 cut(s) | 413, 491, 533, 787, 2048, 2049, 2147 |
| BstSFI | CTRYAG | 3 cut(s) | 276, 480, 2265 |
| BstSLI | GKGCMC | 5 cut(s) | 75, 864, 1448, 2001, 2467 |
| BstUI | CGCG | 4 cut(s) | 1261, 1263, 1293, 2094 |
| BstV1I | GCAGC | 8 cut(s) | 1573, 1676, 2045, 2056, 2074, 2176, 2279, 2340 |
| BstV2I | GAAGAC | 3 cut(s) | 187, 1411, 2400 |
| BstX2I | RGATCY | 4 cut(s) | 269, 337, 1287, 1321 |
| BstYI | RGATCY | 4 cut(s) | 269, 337, 1287, 1321 |
| BsuI | GTATCC | 1 cut(s) | 259 |
| BsuRI | GGCC | 8 cut(s) | 936, 1183, 1242, 1497, 1799, 1828, 1991, 2330 |
| BtgI | CCRYGG | 5 cut(s) | 546, 1026, 1291, 1461, 2092 |
| BtgZI | GCGATG | 1 cut(s) | 107 |
| BtrI | CACGTC | 2 cut(s) | 1756, 2125 |
| BtsCI | GGATG | 5 cut(s) | 342, 595, 826, 1106, 1747 |
| BtsIMutI | CAGTG | 2 cut(s) | 1563, 2338 |
| BveI | ACCTGC | 1 cut(s) | 792 |
| CaiI | CAGNNNCTG | 1 cut(s) | 2521 |
| CfoI | GCGC | 7 cut(s) | 293, 985, 1263, 1441, 1618, 1669, 1956 |
| Cfr10I | RCCGGY | 1 cut(s) | 1510 |
| Cfr13I | GGNCC | 6 cut(s) | 1077, 1240, 1496, 1798, 1826, 2619 |
| Cfr42I | CCGCGG | 2 cut(s) | 1294, 2095 |
| Cfr9I | CCCGGG | 1 cut(s) | 2049 |
| CseI | GACGC | 6 cut(s) | 21, 373, 1267, 2250, 2379, 2483 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1948, 1983 |
| CviAII | CATG | 8 cut(s) | 436, 547, 851, 964, 1385, 2018, 2141, 2549 |
| DriI | GACNNNNNGTC | 1 cut(s) | 854 |
| Eam1104I | CTCTTC | 5 cut(s) | 216, 278, 1263, 1910, 2204 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 854 |
| EarI | CTCTTC | 5 cut(s) | 216, 278, 1263, 1910, 2204 |
| EciI | GGCGGA | 3 cut(s) | 866, 2309, 2516 |
| Eco130I | CCWWGG | 5 cut(s) | 546, 880, 1705, 1806, 2434 |
| Eco24I | GRGCYC | 1 cut(s) | 1378 |
| Eco31I | GGTCTC | 1 cut(s) | 2548 |
| Eco47I | GGWCC | 2 cut(s) | 1077, 2619 |
| Eco47III | AGCGCT | 1 cut(s) | 1668 |
| Eco57I | CTGAAG | 4 cut(s) | 1082, 1915, 2195, 2378 |
| Eco72I | CACGTG | 1 cut(s) | 76 |
| Eco88I | CYCGRG | 2 cut(s) | 2049, 2574 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 1170, 2174 |
| EcoO109I | RGGNCCY | 2 cut(s) | 1077, 1798 |
| EcoRI | GAATTC | 2 cut(s) | 1157, 1874 |
| EcoRII | CCWGG | 3 cut(s) | 491, 533, 2147 |
| EcoT14I | CCWWGG | 5 cut(s) | 546, 880, 1705, 1806, 2434 |
| EcoT38I | GRGCYC | 1 cut(s) | 1378 |
| ErhI | CCWWGG | 5 cut(s) | 546, 880, 1705, 1806, 2434 |
| FaeI | CATG | 8 cut(s) | 439, 550, 854, 967, 1388, 2021, 2144, 2552 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 857, 889 |
| FaqI | GGGAC | 5 cut(s) | 1090, 1529, 1661, 2263, 2377 |
| FatI | CATG | 8 cut(s) | 435, 546, 850, 963, 1384, 2017, 2140, 2548 |
| FauNDI | CATATG | 1 cut(s) | 1867 |
| FbaI | TGATCA | 1 cut(s) | 1969 |
| FokI | GGATG | 5 cut(s) | 329, 602, 833, 1113, 1754 |
| FriOI | GRGCYC | 1 cut(s) | 1378 |
| GlaI | GCGC | 7 cut(s) | 292, 984, 1262, 1440, 1617, 1668, 1955 |
| GsaI | CCCAGC | 3 cut(s) | 626, 1345, 1928 |
| GsuI | CTGGAG | 5 cut(s) | 603, 632, 896, 2131, 2237 |
| HaeII | RGCGCY | 5 cut(s) | 294, 986, 1442, 1619, 1670 |
| HaeIII | GGCC | 8 cut(s) | 936, 1183, 1242, 1497, 1799, 1828, 1991, 2330 |
| HapII | CCGG | 9 cut(s) | 49, 414, 789, 1008, 1511, 1829, 2050, 2120, 2498 |
| HgaI | GACGC | 6 cut(s) | 21, 373, 1267, 2250, 2379, 2483 |
| HhaI | GCGC | 7 cut(s) | 293, 985, 1263, 1441, 1618, 1669, 1956 |
| Hin1I | GRCGYC | 2 cut(s) | 32, 2390 |
| Hin1II | CATG | 8 cut(s) | 439, 550, 854, 967, 1388, 2021, 2144, 2552 |
| Hin6I | GCGC | 7 cut(s) | 291, 983, 1261, 1439, 1616, 1667, 1954 |
| HinP1I | GCGC | 7 cut(s) | 291, 983, 1261, 1439, 1616, 1667, 1954 |
| HincII | GTYRAC | 5 cut(s) | 133, 693, 724, 760, 1368 |
| HindII | GTYRAC | 5 cut(s) | 133, 693, 724, 760, 1368 |
| HinfI | GANTC | 8 cut(s) | 410, 425, 458, 689, 1057, 1853, 1947, 2251 |
| HpaI | GTTAAC | 1 cut(s) | 1368 |
| HpaII | CCGG | 9 cut(s) | 49, 414, 789, 1008, 1511, 1829, 2050, 2120, 2498 |
| HphI | GGTGA | 5 cut(s) | 307, 673, 1951, 2218, 2234 |
| Hpy166II | GTNNAC | 9 cut(s) | 79, 110, 133, 693, 724, 760, 862, 1368, 1702 |
| Hpy188I | TCNGA | 9 cut(s) | 218, 421, 1062, 1156, 1172, 1431, 1885, 2539, 2623 |
| Hpy188III | TCNNGA | 7 cut(s) | 49, 241, 335, 566, 913, 1054, 1144 |
| Hpy8I | GTNNAC | 9 cut(s) | 79, 110, 133, 693, 724, 760, 862, 1368, 1702 |
| Hpy99I | CGWCG | 7 cut(s) | 37, 194, 236, 389, 713, 860, 2453 |
| HpyAV | CCTTC | 8 cut(s) | 238, 811, 1057, 1090, 1597, 1780, 1936, 2170 |
| HpyCH4III | ACNGT | 7 cut(s) | 83, 713, 748, 1027, 1417, 1816, 1822 |
| HpyCH4IV | ACGT | 4 cut(s) | 75, 1755, 2124, 2346 |
| HpyCH4V | TGCA | 9 cut(s) | 482, 862, 1519, 1553, 1561, 1600, 1837, 2192, 2267 |
| HpySE526I | ACGT | 4 cut(s) | 75, 1755, 2124, 2346 |
| Hsp92I | GRCGYC | 2 cut(s) | 32, 2390 |
| Hsp92II | CATG | 8 cut(s) | 439, 550, 854, 967, 1388, 2021, 2144, 2552 |
| HspAI | GCGC | 7 cut(s) | 291, 983, 1261, 1439, 1616, 1667, 1954 |
| Kpn2I | TCCGGA | 1 cut(s) | 48 |
| Ksp22I | TGATCA | 1 cut(s) | 1969 |
| KspAI | GTTAAC | 1 cut(s) | 1368 |
| KspI | CCGCGG | 2 cut(s) | 1294, 2095 |
| Lsp1109I | GCAGC | 8 cut(s) | 1573, 1676, 2045, 2056, 2074, 2176, 2279, 2340 |
| LweI | GCATC | 4 cut(s) | 580, 1489, 1735, 2077 |
| MaeII | ACGT | 4 cut(s) | 75, 1755, 2124, 2346 |
| MaeIII | GTNAC | 5 cut(s) | 886, 1687, 1816, 2113, 2593 |
| MbiI | CCGCTC | 4 cut(s) | 1921, 2059, 2243, 2579 |
| MflI | RGATCY | 4 cut(s) | 269, 337, 1287, 1321 |
| MhlI | GDGCHC | 7 cut(s) | 75, 864, 1378, 1448, 1581, 2001, 2467 |
| MluCI | AATT | 8 cut(s) | 9, 253, 929, 1046, 1157, 1197, 1312, 1874 |
| MlyI | GAGTC | 4 cut(s) | 434, 698, 1847, 2245 |
| MmeI | TCCRAC | 3 cut(s) | 1134, 1186, 1629 |
| MroI | TCCGGA | 1 cut(s) | 48 |
| MroXI | GAANNNNTTC | 1 cut(s) | 271 |
| MseI | TTAA | 4 cut(s) | 44, 1149, 1367, 2283 |
| MspA1I | CMGCKG | 7 cut(s) | 719, 1293, 1682, 1780, 1935, 2094, 2270 |
| MspI | CCGG | 9 cut(s) | 49, 414, 789, 1008, 1511, 1829, 2050, 2120, 2498 |
| MspR9I | CCNGG | 7 cut(s) | 415, 493, 535, 789, 2050, 2051, 2149 |
| Mva1269I | GAATGC | 1 cut(s) | 1129 |
| MvaI | CCWGG | 3 cut(s) | 493, 535, 2149 |
| MvnI | CGCG | 4 cut(s) | 1261, 1263, 1293, 2094 |
| NciI | CCSGG | 4 cut(s) | 415, 789, 2050, 2051 |
| NcoI | CCATGG | 1 cut(s) | 546 |
| NdeI | CATATG | 1 cut(s) | 1867 |
| NheI | GCTAGC | 2 cut(s) | 380, 641 |
| NlaIII | CATG | 8 cut(s) | 439, 550, 854, 967, 1388, 2021, 2144, 2552 |
| NmeAIII | GCCGAG | 2 cut(s) | 1473, 1967 |
| NmuCI | GTSAC | 3 cut(s) | 886, 1687, 1816 |
| NspI | RCATGY | 3 cut(s) | 854, 967, 1388 |
| PaeR7I | CTCGAG | 1 cut(s) | 2574 |
| PaqCI | CACCTGC | 1 cut(s) | 792 |
| PasI | CCCWGGG | 1 cut(s) | 534 |
| PciI | ACATGT | 1 cut(s) | 963 |
| PcsI | WCGNNNNNNNCGW | 3 cut(s) | 384, 559, 1731 |
| PctI | GAATGC | 1 cut(s) | 1129 |
| PdmI | GAANNNNTTC | 1 cut(s) | 271 |
| PfeI | GAWTC | 4 cut(s) | 410, 458, 1057, 1947 |
| PflFI | GACNNNGTC | 3 cut(s) | 1730, 2141, 2381 |
| PflMI | CCANNNNNTGG | 4 cut(s) | 534, 919, 2379, 2440 |
| PfoI | TCCNGGA | 1 cut(s) | 491 |
| PleI | GAGTC | 4 cut(s) | 433, 697, 1847, 2245 |
| PmaCI | CACGTG | 1 cut(s) | 76 |
| PmlI | CACGTG | 1 cut(s) | 76 |
| PpsI | GAGTC | 4 cut(s) | 433, 697, 1847, 2245 |
| Ppu21I | YACGTR | 1 cut(s) | 76 |
| PpuMI | RGGWCCY | 1 cut(s) | 1077 |
| PscI | ACATGT | 1 cut(s) | 963 |
| PsiI | TTATAA | 1 cut(s) | 23 |
| Psp5II | RGGWCCY | 1 cut(s) | 1077 |
| Psp6I | CCWGG | 3 cut(s) | 491, 533, 2147 |
| PspCI | CACGTG | 1 cut(s) | 76 |
| PspFI | CCCAGC | 3 cut(s) | 622, 1341, 1924 |
| PspGI | CCWGG | 3 cut(s) | 491, 533, 2147 |
| PspPI | GGNCC | 6 cut(s) | 1077, 1240, 1496, 1798, 1826, 2619 |
| PspPPI | RGGWCCY | 1 cut(s) | 1077 |
| PspXI | VCTCGAGB | 1 cut(s) | 2574 |
| PstI | CTGCAG | 2 cut(s) | 484, 2269 |
| PstNI | CAGNNNCTG | 1 cut(s) | 2521 |
| PsuI | RGATCY | 4 cut(s) | 269, 337, 1287, 1321 |
| PsyI | GACNNNGTC | 3 cut(s) | 1730, 2141, 2381 |
| PvuII | CAGCTG | 1 cut(s) | 2270 |
| SacII | CCGCGG | 2 cut(s) | 1294, 2095 |
| SaqAI | TTAA | 4 cut(s) | 44, 1149, 1367, 2283 |
| Sau96I | GGNCC | 6 cut(s) | 1077, 1240, 1496, 1798, 1826, 2619 |
| SbfI | CCTGCAGG | 1 cut(s) | 484 |
| SchI | GAGTC | 4 cut(s) | 434, 698, 1847, 2245 |
| ScrFI | CCNGG | 7 cut(s) | 415, 493, 535, 789, 2050, 2051, 2149 |
| SdaI | CCTGCAGG | 1 cut(s) | 484 |
| SduI | GDGCHC | 7 cut(s) | 75, 864, 1378, 1448, 1581, 2001, 2467 |
| SfaNI | GCATC | 4 cut(s) | 580, 1489, 1735, 2077 |
| SfcI | CTRYAG | 3 cut(s) | 276, 480, 2265 |
| Sfr274I | CTCGAG | 1 cut(s) | 2574 |
| Sfr303I | CCGCGG | 2 cut(s) | 1294, 2095 |
| SgrAI | CRCCGGYG | 1 cut(s) | 1510 |
| SgrBI | CCGCGG | 2 cut(s) | 1294, 2095 |
| SinI | GGWCC | 2 cut(s) | 1077, 2619 |
| SlaI | CTCGAG | 1 cut(s) | 2574 |
| SmaI | CCCGGG | 1 cut(s) | 2051 |
| SmlI | CTYRAG | 3 cut(s) | 1379, 1889, 2574 |
| SmoI | CTYRAG | 3 cut(s) | 1379, 1889, 2574 |
| Sse8387I | CCTGCAGG | 1 cut(s) | 484 |
| Sse9I | AATT | 8 cut(s) | 9, 253, 929, 1046, 1157, 1197, 1312, 1874 |
| StyD4I | CCNGG | 7 cut(s) | 413, 491, 533, 787, 2048, 2049, 2147 |
| StyI | CCWWGG | 5 cut(s) | 546, 880, 1705, 1806, 2434 |
| TaaI | ACNGT | 7 cut(s) | 83, 713, 748, 1027, 1417, 1816, 1822 |
| TaiI | ACGT | 4 cut(s) | 78, 1758, 2127, 2349 |
| TaqI | TCGA | 9 cut(s) | 398, 601, 1053, 1121, 1422, 1734, 1851, 2451, 2575 |
| TasI | AATT | 8 cut(s) | 9, 253, 929, 1046, 1157, 1197, 1312, 1874 |
| TatI | WGTACW | 1 cut(s) | 2298 |
| TfiI | GAWTC | 4 cut(s) | 410, 458, 1057, 1947 |
| Tru1I | TTAA | 4 cut(s) | 44, 1149, 1367, 2283 |
| Tru9I | TTAA | 4 cut(s) | 44, 1149, 1367, 2283 |
| TscAI | CASTG | 2 cut(s) | 1563, 2338 |
| TseFI | GTSAC | 3 cut(s) | 886, 1687, 1816 |
| TseI | GCWGC | 8 cut(s) | 1561, 1664, 2033, 2044, 2062, 2189, 2267, 2353 |
| Tsp45I | GTSAC | 3 cut(s) | 886, 1687, 1816 |
| TspDTI | ATGAA | 1 cut(s) | 459 |
| TspGWI | ACGGA | 1 cut(s) | 1996 |
| TspMI | CCCGGG | 1 cut(s) | 2049 |
| TspRI | CASTG | 2 cut(s) | 1563, 2338 |
| Tth111I | GACNNNGTC | 3 cut(s) | 1730, 2141, 2381 |
| Van91I | CCANNNNNTGG | 4 cut(s) | 534, 919, 2379, 2440 |
| VneI | GTGCAC | 1 cut(s) | 860 |
| VpaK11BI | GGWCC | 2 cut(s) | 1077, 2619 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 1170, 2174 |
| XapI | RAATTY | 3 cut(s) | 929, 1157, 1874 |
| XceI | RCATGY | 3 cut(s) | 854, 967, 1388 |
| XhoI | CTCGAG | 1 cut(s) | 2574 |
| XmaI | CCCGGG | 1 cut(s) | 2049 |
| XmnI | GAANNNNTTC | 1 cut(s) | 271 |