Putative gypsy type transposon
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 2361 |
| Acc36I | ACCTGC | 2 cut(s) | 1711, 2410 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 1599, 3225 |
| AccBSI | CCGCTC | 3 cut(s) | 2255, 2782, 2923 |
| AccI | GTMKAC | 1 cut(s) | 2681 |
| AccII | CGCG | 7 cut(s) | 1920, 1935, 2094, 2422, 2594, 3102, 3459 |
| AclWI | GGATC | 4 cut(s) | 1330, 1947, 3010, 3469 |
| AcoI | YGGCCR | 7 cut(s) | 283, 2233, 2559, 2907, 2991, 3045, 3186 |
| AcuI | CTGAAG | 3 cut(s) | 2689, 3005, 3522 |
| AcyI | GRCGYC | 5 cut(s) | 2070, 2306, 2358, 3216, 3236 |
| AfeI | AGCGCT | 1 cut(s) | 1617 |
| AflIII | ACRYGT | 1 cut(s) | 1596 |
| AgsI | TTSAA | 4 cut(s) | 1288, 1547, 2039, 2432 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 3444 |
| AhlI | ACTAGT | 1 cut(s) | 2027 |
| AjiI | CACGTC | 1 cut(s) | 2545 |
| AjnI | CCWGG | 7 cut(s) | 1512, 2132, 2571, 2832, 2928, 3183, 3416 |
| AleI | CACNNNNGTG | 1 cut(s) | 2423 |
| Alw21I | GWGCWC | 2 cut(s) | 2331, 2790 |
| Alw26I | GTCTC | 5 cut(s) | 38, 1262, 2162, 2392, 3431 |
| Alw44I | GTGCAC | 1 cut(s) | 2327 |
| AlwI | GGATC | 4 cut(s) | 1330, 1947, 3010, 3469 |
| Ama87I | CYCGRG | 6 cut(s) | 1177, 2316, 2395, 2528, 2772, 3442 |
| Aor51HI | AGCGCT | 1 cut(s) | 1617 |
| ApaI | GGGCCC | 1 cut(s) | 2497 |
| ApaLI | GTGCAC | 1 cut(s) | 2327 |
| AspLEI | GCGC | 9 cut(s) | 1618, 1750, 2096, 2179, 2308, 3104, 3157, 3218, 3341 |
| AsuC2I | CCSGG | 7 cut(s) | 1178, 1179, 1422, 2049, 2773, 2774, 3347 |
| AsuHPI | GGTGA | 7 cut(s) | 1166, 1441, 2170, 2353, 2437, 2905, 3080 |
| AsuNHI | GCTAGC | 1 cut(s) | 1612 |
| AvaI | CYCGRG | 6 cut(s) | 1177, 2316, 2395, 2528, 2772, 3442 |
| AvaII | GGWCC | 5 cut(s) | 1797, 1839, 2089, 2926, 3387 |
| BaeGI | GKGCMC | 6 cut(s) | 2331, 2348, 2497, 2724, 3184, 3316 |
| BalI | TGGCCA | 2 cut(s) | 285, 3188 |
| BanII | GRGCYC | 3 cut(s) | 2396, 2497, 2790 |
| BauI | CACGAG | 2 cut(s) | 2563, 2741 |
| BbsI | GAAGAC | 1 cut(s) | 1979 |
| Bbv12I | GWGCWC | 2 cut(s) | 2331, 2790 |
| BbvCI | CCTCAGC | 1 cut(s) | 3090 |
| BceAI | ACGGC | 5 cut(s) | 1464, 2220, 2660, 2672, 2894 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 2519, 2553 |
| BciT130I | CCWGG | 7 cut(s) | 1514, 2134, 2573, 2834, 2930, 3185, 3418 |
| BcnI | CCSGG | 7 cut(s) | 1178, 1179, 1422, 2049, 2773, 2774, 3347 |
| BcoDI | GTCTC | 5 cut(s) | 38, 1262, 2162, 2392, 3431 |
| BcuI | ACTAGT | 1 cut(s) | 2027 |
| BfaI | CTAG | 5 cut(s) | 1532, 1613, 2028, 3039, 3527 |
| BfmI | CTRYAG | 1 cut(s) | 3203 |
| BfoI | RGCGCY | 7 cut(s) | 1619, 1751, 2180, 2309, 3158, 3219, 3342 |
| BfuAI | ACCTGC | 2 cut(s) | 1711, 2410 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 2258 |
| BglII | AGATCT | 1 cut(s) | 1584 |
| BlpI | GCTNAGC | 1 cut(s) | 2180 |
| Bme18I | GGWCC | 5 cut(s) | 1797, 1839, 2089, 2926, 3387 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 3444 |
| BmeT110I | CYCGRG | 6 cut(s) | 1177, 2316, 2395, 2528, 2772, 3442 |
| BmgBI | CACGTC | 1 cut(s) | 2545 |
| BmrI | ACTGGG | 3 cut(s) | 2499, 3235, 3370 |
| BmsI | GCATC | 7 cut(s) | 1240, 1387, 1599, 2866, 2881, 3256, 3502 |
| BmtI | GCTAGC | 1 cut(s) | 1616 |
| BmuI | ACTGGG | 3 cut(s) | 2499, 3235, 3370 |
| BoxI | GACNNNNGTC | 1 cut(s) | 2030 |
| BpiI | GAAGAC | 1 cut(s) | 1979 |
| Bpu10I | CCTNAGC | 4 cut(s) | 2256, 2789, 3090, 3261 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 2180 |
| BpuMI | CCSGG | 7 cut(s) | 1178, 1179, 1422, 2049, 2773, 2774, 3347 |
| BsaAI | YACGTR | 2 cut(s) | 1696, 2589 |
| BsaHI | GRCGYC | 5 cut(s) | 2070, 2306, 2358, 3216, 3236 |
| BsaI | GGTCTC | 2 cut(s) | 2392, 3431 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 1844, 1874, 2612, 2642 |
| Bse118I | RCCGGY | 3 cut(s) | 1737, 3176, 3244 |
| Bse1I | ACTGG | 8 cut(s) | 1692, 1793, 1999, 2198, 2272, 2494, 3230, 3376 |
| BseBI | CCWGG | 7 cut(s) | 1514, 2134, 2573, 2834, 2930, 3185, 3418 |
| BseGI | GGATG | 5 cut(s) | 1608, 2479, 3271, 3358, 3430 |
| BseNI | ACTGG | 8 cut(s) | 1692, 1793, 1999, 2198, 2272, 2494, 3230, 3376 |
| BseRI | GAGGAG | 4 cut(s) | 1514, 2483, 2810, 3107 |
| BseSI | GKGCMC | 6 cut(s) | 2331, 2348, 2497, 2724, 3184, 3316 |
| BseYI | CCCAGC | 6 cut(s) | 1998, 2347, 2647, 3318, 3360, 3395 |
| BsgI | GTGCAG | 2 cut(s) | 2309, 2723 |
| Bsh1236I | CGCG | 7 cut(s) | 1920, 1935, 2094, 2422, 2594, 3102, 3459 |
| Bsh1285I | CGRYCG | 4 cut(s) | 2681, 2685, 3111, 3249 |
| BsiEI | CGRYCG | 4 cut(s) | 2681, 2685, 3111, 3249 |
| BsiHKAI | GWGCWC | 2 cut(s) | 2331, 2790 |
| BsiHKCI | CYCGRG | 6 cut(s) | 1177, 2316, 2395, 2528, 2772, 3442 |
| BsiWI | CGTACG | 1 cut(s) | 2589 |
| BslFI | GGGAC | 7 cut(s) | 1233, 1665, 1810, 2831, 2939, 2956, 3373 |
| BsmAI | GTCTC | 5 cut(s) | 38, 1262, 2162, 2392, 3431 |
| BsmBI | CGTCTC | 1 cut(s) | 2162 |
| BsmFI | GGGAC | 7 cut(s) | 1233, 1665, 1810, 2831, 2939, 2956, 3373 |
| Bso31I | GGTCTC | 2 cut(s) | 2392, 3431 |
| BsoBI | CYCGRG | 6 cut(s) | 1177, 2316, 2395, 2528, 2772, 3442 |
| Bsp120I | GGGCCC | 1 cut(s) | 2493 |
| Bsp1286I | GDGCHC | 8 cut(s) | 2331, 2348, 2396, 2497, 2724, 2790, 3184, 3316 |
| Bsp143I | GATC | 9 cut(s) | 1335, 1467, 1584, 1939, 2014, 2484, 2983, 3015, 3461 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 2180 |
| Bsp19I | CCATGG | 2 cut(s) | 1162, 2085 |
| Bsp68I | TCGCGA | 1 cut(s) | 1920 |
| BspFNI | CGCG | 7 cut(s) | 1920, 1935, 2094, 2422, 2594, 3102, 3459 |
| BspMAI | CTGCAG | 1 cut(s) | 3207 |
| BspMI | ACCTGC | 2 cut(s) | 1711, 2410 |
| BspOI | GCTAGC | 1 cut(s) | 1616 |
| BspPI | GGATC | 4 cut(s) | 1330, 1947, 3010, 3469 |
| BspTNI | GGTCTC | 2 cut(s) | 2392, 3431 |
| BsrBI | CCGCTC | 3 cut(s) | 2255, 2782, 2923 |
| BsrFI | RCCGGY | 3 cut(s) | 1737, 3176, 3244 |
| BsrI | ACTGG | 8 cut(s) | 1692, 1793, 1999, 2198, 2272, 2494, 3230, 3376 |
| BssAI | RCCGGY | 3 cut(s) | 1737, 3176, 3244 |
| BssMI | GATC | 9 cut(s) | 1335, 1467, 1584, 1939, 2014, 2484, 2983, 3015, 3461 |
| BssNI | GRCGYC | 5 cut(s) | 2070, 2306, 2358, 3216, 3236 |
| BssSI | CACGAG | 2 cut(s) | 2563, 2741 |
| BssT1I | CCWWGG | 3 cut(s) | 1162, 1705, 2085 |
| Bst2BI | CACGAG | 2 cut(s) | 2563, 2741 |
| Bst2UI | CCWGG | 7 cut(s) | 1514, 2134, 2573, 2834, 2930, 3185, 3418 |
| Bst4CI | ACNGT | 9 cut(s) | 1397, 1660, 2155, 2275, 2341, 2679, 2879, 3060, 3311 |
| Bst6I | CTCTTC | 3 cut(s) | 1449, 1920, 2460 |
| BstACI | GRCGYC | 5 cut(s) | 2070, 2306, 2358, 3216, 3236 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 1484, 2891 |
| BstBAI | YACGTR | 2 cut(s) | 1696, 2589 |
| BstDSI | CCRYGG | 4 cut(s) | 1162, 2085, 2896, 3457 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 1317, 2867 |
| BstF5I | GGATG | 5 cut(s) | 1608, 2479, 3271, 3358, 3430 |
| BstFNI | CGCG | 7 cut(s) | 1920, 1935, 2094, 2422, 2594, 3102, 3459 |
| BstH2I | RGCGCY | 7 cut(s) | 1619, 1751, 2180, 2309, 3158, 3219, 3342 |
| BstHHI | GCGC | 9 cut(s) | 1618, 1750, 2096, 2179, 2308, 3104, 3157, 3218, 3341 |
| BstKTI | GATC | 9 cut(s) | 1338, 1470, 1587, 1942, 2017, 2487, 2986, 3018, 3464 |
| BstMAI | GTCTC | 5 cut(s) | 38, 1262, 2162, 2392, 3431 |
| BstMBI | GATC | 9 cut(s) | 1335, 1467, 1584, 1939, 2014, 2484, 2983, 3015, 3461 |
| BstMCI | CGRYCG | 4 cut(s) | 2681, 2685, 3111, 3249 |
| BstNI | CCWGG | 7 cut(s) | 1514, 2134, 2573, 2834, 2930, 3185, 3418 |
| BstNSI | RCATGY | 1 cut(s) | 1600 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 2030 |
| BstSFI | CTRYAG | 1 cut(s) | 3203 |
| BstSLI | GKGCMC | 6 cut(s) | 2331, 2348, 2497, 2724, 3184, 3316 |
| BstUI | CGCG | 7 cut(s) | 1920, 1935, 2094, 2422, 2594, 3102, 3459 |
| BstV2I | GAAGAC | 1 cut(s) | 1979 |
| BstX2I | RGATCY | 3 cut(s) | 1584, 3015, 3461 |
| BstXI | CCANNNNNNTGG | 4 cut(s) | 85, 281, 846, 963 |
| BstYI | RGATCY | 3 cut(s) | 1584, 3015, 3461 |
| BtgI | CCRYGG | 4 cut(s) | 1162, 2085, 2896, 3457 |
| BtgZI | GCGATG | 1 cut(s) | 2843 |
| BtrI | CACGTC | 1 cut(s) | 2545 |
| BtsCI | GGATG | 5 cut(s) | 1608, 2479, 3271, 3358, 3430 |
| BtsI | GCAGTG | 1 cut(s) | 2071 |
| BtsIMutI | CAGTG | 4 cut(s) | 2071, 2205, 2346, 2487 |
| BtuMI | TCGCGA | 1 cut(s) | 1920 |
| BveI | ACCTGC | 2 cut(s) | 1711, 2410 |
| CfoI | GCGC | 9 cut(s) | 1618, 1750, 2096, 2179, 2308, 3104, 3157, 3218, 3341 |
| Cfr10I | RCCGGY | 3 cut(s) | 1737, 3176, 3244 |
| Cfr42I | CCGCGG | 1 cut(s) | 3460 |
| Cfr9I | CCCGGG | 2 cut(s) | 1177, 2772 |
| CseI | GACGC | 6 cut(s) | 1427, 2078, 2179, 2891, 3225, 3506 |
| CviAII | CATG | 8 cut(s) | 1163, 1496, 1597, 1780, 2086, 2122, 2212, 3241 |
| DinI | GGCGCC | 2 cut(s) | 2307, 3217 |
| DpnI | GATC | 9 cut(s) | 1337, 1469, 1586, 1941, 2016, 2486, 2985, 3017, 3463 |
| DpnII | GATC | 9 cut(s) | 1335, 1467, 1584, 1939, 2014, 2484, 2983, 3015, 3461 |
| DriI | GACNNNNNGTC | 1 cut(s) | 3444 |
| EaeI | YGGCCR | 7 cut(s) | 283, 2233, 2559, 2907, 2991, 3045, 3186 |
| Eam1104I | CTCTTC | 3 cut(s) | 1449, 1920, 2460 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 3444 |
| EarI | CTCTTC | 3 cut(s) | 1449, 1920, 2460 |
| EciI | GGCGGA | 9 cut(s) | 1466, 1499, 1679, 1975, 2034, 2771, 3155, 3365, 3437 |
| Ecl136II | GAGCTC | 1 cut(s) | 2788 |
| Eco130I | CCWWGG | 3 cut(s) | 1162, 1705, 2085 |
| Eco147I | AGGCCT | 2 cut(s) | 1463, 1482 |
| Eco24I | GRGCYC | 3 cut(s) | 2396, 2497, 2790 |
| Eco31I | GGTCTC | 2 cut(s) | 2392, 3431 |
| Eco47I | GGWCC | 5 cut(s) | 1797, 1839, 2089, 2926, 3387 |
| Eco47III | AGCGCT | 1 cut(s) | 1617 |
| Eco53kI | GAGCTC | 1 cut(s) | 2788 |
| Eco57I | CTGAAG | 3 cut(s) | 2689, 3005, 3522 |
| Eco88I | CYCGRG | 6 cut(s) | 1177, 2316, 2395, 2528, 2772, 3442 |
| EcoICRI | GAGCTC | 1 cut(s) | 2788 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 1317, 2867 |
| EcoO109I | RGGNCCY | 4 cut(s) | 1797, 2493, 2926, 3387 |
| EcoRII | CCWGG | 7 cut(s) | 1512, 2132, 2571, 2832, 2928, 3183, 3416 |
| EcoT14I | CCWWGG | 3 cut(s) | 1162, 1705, 2085 |
| EcoT38I | GRGCYC | 3 cut(s) | 2396, 2497, 2790 |
| EgeI | GGCGCC | 2 cut(s) | 2307, 3217 |
| EheI | GGCGCC | 2 cut(s) | 2307, 3217 |
| ErhI | CCWWGG | 3 cut(s) | 1162, 1705, 2085 |
| Esp3I | CGTCTC | 1 cut(s) | 2162 |
| FaeI | CATG | 8 cut(s) | 1166, 1499, 1600, 1783, 2089, 2125, 2215, 3244 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 1316, 1348, 3325, 3357 |
| FaqI | GGGAC | 7 cut(s) | 1233, 1665, 1810, 2831, 2939, 2956, 3373 |
| FatI | CATG | 8 cut(s) | 1162, 1495, 1596, 1779, 2085, 2121, 2211, 3240 |
| FauNDI | CATATG | 1 cut(s) | 2716 |
| FblI | GTMKAC | 1 cut(s) | 2681 |
| FokI | GGATG | 5 cut(s) | 1615, 2486, 3278, 3365, 3437 |
| FriOI | GRGCYC | 3 cut(s) | 2396, 2497, 2790 |
| FspBI | CTAG | 5 cut(s) | 1532, 1613, 2028, 3039, 3527 |
| GlaI | GCGC | 9 cut(s) | 1617, 1749, 2095, 2178, 2307, 3103, 3156, 3217, 3340 |
| GsaI | CCCAGC | 6 cut(s) | 2002, 2351, 2651, 3322, 3364, 3399 |
| HaeII | RGCGCY | 7 cut(s) | 1619, 1751, 2180, 2309, 3158, 3219, 3342 |
| HgaI | GACGC | 6 cut(s) | 1427, 2078, 2179, 2891, 3225, 3506 |
| HhaI | GCGC | 9 cut(s) | 1618, 1750, 2096, 2179, 2308, 3104, 3157, 3218, 3341 |
| Hin1I | GRCGYC | 5 cut(s) | 2070, 2306, 2358, 3216, 3236 |
| Hin1II | CATG | 8 cut(s) | 1166, 1499, 1600, 1783, 2089, 2125, 2215, 3244 |
| Hin6I | GCGC | 9 cut(s) | 1616, 1748, 2094, 2177, 2306, 3102, 3155, 3216, 3339 |
| HinP1I | GCGC | 9 cut(s) | 1616, 1748, 2094, 2177, 2306, 3102, 3155, 3216, 3339 |
| HincII | GTYRAC | 3 cut(s) | 2682, 2692, 3307 |
| HindII | GTYRAC | 3 cut(s) | 2682, 2692, 3307 |
| HphI | GGTGA | 7 cut(s) | 1166, 1441, 2170, 2353, 2437, 2905, 3080 |
| Hpy166II | GTNNAC | 7 cut(s) | 1693, 1726, 2161, 2329, 2682, 2692, 3307 |
| Hpy188III | TCNNGA | 5 cut(s) | 760, 1919, 2113, 2397, 2602 |
| Hpy8I | GTNNAC | 7 cut(s) | 1693, 1726, 2161, 2329, 2682, 2692, 3307 |
| Hpy99I | CGWCG | 3 cut(s) | 1450, 1819, 1861 |
| HpyCH4III | ACNGT | 9 cut(s) | 1397, 1660, 2155, 2275, 2341, 2679, 2879, 3060, 3311 |
| HpyCH4IV | ACGT | 5 cut(s) | 1695, 1859, 2358, 2544, 2588 |
| HpyCH4V | TGCA | 8 cut(s) | 4, 1495, 1675, 2290, 2329, 2740, 2812, 3205 |
| HpySE526I | ACGT | 5 cut(s) | 1695, 1859, 2358, 2544, 2588 |
| Hsp92I | GRCGYC | 5 cut(s) | 2070, 2306, 2358, 3216, 3236 |
| Hsp92II | CATG | 8 cut(s) | 1166, 1499, 1600, 1783, 2089, 2125, 2215, 3244 |
| HspAI | GCGC | 9 cut(s) | 1616, 1748, 2094, 2177, 2306, 3102, 3155, 3216, 3339 |
| KasI | GGCGCC | 2 cut(s) | 2305, 3215 |
| KflI | GGGWCCC | 1 cut(s) | 3387 |
| KroI | GCCGGC | 1 cut(s) | 1737 |
| KroNI | GCCGGC | 1 cut(s) | 1739 |
| KspI | CCGCGG | 1 cut(s) | 3460 |
| Kzo9I | GATC | 9 cut(s) | 1335, 1467, 1584, 1939, 2014, 2484, 2983, 3015, 3461 |
| LweI | GCATC | 7 cut(s) | 1240, 1387, 1599, 2866, 2881, 3256, 3502 |
| MaeI | CTAG | 5 cut(s) | 1532, 1613, 2028, 3039, 3527 |
| MaeII | ACGT | 5 cut(s) | 1695, 1859, 2358, 2544, 2588 |
| MaeIII | GTNAC | 6 cut(s) | 1519, 2066, 2237, 2359, 2879, 2911 |
| MalI | GATC | 9 cut(s) | 1337, 1469, 1586, 1941, 2016, 2486, 2985, 3017, 3463 |
| MbiI | CCGCTC | 3 cut(s) | 2255, 2782, 2923 |
| MboI | GATC | 9 cut(s) | 1335, 1467, 1584, 1939, 2014, 2484, 2983, 3015, 3461 |
| MflI | RGATCY | 3 cut(s) | 1584, 3015, 3461 |
| MhlI | GDGCHC | 8 cut(s) | 2331, 2348, 2396, 2497, 2724, 2790, 3184, 3316 |
| MlsI | TGGCCA | 2 cut(s) | 285, 3188 |
| MluNI | TGGCCA | 2 cut(s) | 285, 3188 |
| Mly113I | GGCGCC | 2 cut(s) | 2306, 3216 |
| MmeI | TCCRAC | 8 cut(s) | 771, 1469, 1854, 2355, 2937, 3042, 3131, 3360 |
| Mox20I | TGGCCA | 2 cut(s) | 285, 3188 |
| MroNI | GCCGGC | 1 cut(s) | 1737 |
| MscI | TGGCCA | 2 cut(s) | 285, 3188 |
| MseI | TTAA | 2 cut(s) | 1869, 3054 |
| MslI | CAYNNNNRTG | 2 cut(s) | 1601, 2423 |
| Msp20I | TGGCCA | 2 cut(s) | 285, 3188 |
| MvaI | CCWGG | 7 cut(s) | 1514, 2134, 2573, 2834, 2930, 3185, 3418 |
| MvnI | CGCG | 7 cut(s) | 1920, 1935, 2094, 2422, 2594, 3102, 3459 |
| NaeI | GCCGGC | 1 cut(s) | 1739 |
| NarI | GGCGCC | 2 cut(s) | 2306, 3216 |
| NciI | CCSGG | 7 cut(s) | 1178, 1179, 1422, 2049, 2773, 2774, 3347 |
| NcoI | CCATGG | 2 cut(s) | 1162, 2085 |
| NdeI | CATATG | 1 cut(s) | 2716 |
| NdeII | GATC | 9 cut(s) | 1335, 1467, 1584, 1939, 2014, 2484, 2983, 3015, 3461 |
| NgoMIV | GCCGGC | 1 cut(s) | 1737 |
| NheI | GCTAGC | 1 cut(s) | 1612 |
| NlaIII | CATG | 8 cut(s) | 1166, 1499, 1600, 1783, 2089, 2125, 2215, 3244 |
| NmeAIII | GCCGAG | 2 cut(s) | 2503, 3073 |
| NmuCI | GTSAC | 6 cut(s) | 1519, 2066, 2237, 2359, 2879, 2911 |
| NruI | TCGCGA | 1 cut(s) | 1920 |
| NspI | RCATGY | 1 cut(s) | 1600 |
| OliI | CACNNNNGTG | 1 cut(s) | 2423 |
| PaeR7I | CTCGAG | 1 cut(s) | 2395 |
| PceI | AGGCCT | 2 cut(s) | 1463, 1482 |
| PciI | ACATGT | 1 cut(s) | 1596 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 1939, 2393 |
| PdiI | GCCGGC | 1 cut(s) | 1739 |
| PfeI | GAWTC | 4 cut(s) | 580, 1963, 2428, 3029 |
| Pfl23II | CGTACG | 1 cut(s) | 2589 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 1599, 3225 |
| PluTI | GGCGCC | 2 cut(s) | 2309, 3219 |
| Ppu21I | YACGTR | 2 cut(s) | 1696, 2589 |
| PpuMI | RGGWCCY | 3 cut(s) | 1797, 2926, 3387 |
| PscI | ACATGT | 1 cut(s) | 1596 |
| PshAI | GACNNNNGTC | 1 cut(s) | 2030 |
| Psp124BI | GAGCTC | 1 cut(s) | 2790 |
| Psp5II | RGGWCCY | 3 cut(s) | 1797, 2926, 3387 |
| Psp6I | CCWGG | 7 cut(s) | 1512, 2132, 2571, 2832, 2928, 3183, 3416 |
| PspFI | CCCAGC | 6 cut(s) | 1998, 2347, 2647, 3318, 3360, 3395 |
| PspGI | CCWGG | 7 cut(s) | 1512, 2132, 2571, 2832, 2928, 3183, 3416 |
| PspLI | CGTACG | 1 cut(s) | 2589 |
| PspOMI | GGGCCC | 1 cut(s) | 2493 |
| PspPPI | RGGWCCY | 3 cut(s) | 1797, 2926, 3387 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 2582, 2614 |
| PstI | CTGCAG | 1 cut(s) | 3207 |
| PsuI | RGATCY | 3 cut(s) | 1584, 3015, 3461 |
| RruI | TCGCGA | 1 cut(s) | 1920 |
| RseI | CAYNNNNRTG | 2 cut(s) | 1601, 2423 |
| SacI | GAGCTC | 1 cut(s) | 2790 |
| SacII | CCGCGG | 1 cut(s) | 3460 |
| SalI | GTCGAC | 1 cut(s) | 2680 |
| SaqAI | TTAA | 2 cut(s) | 1869, 3054 |
| Sau3AI | GATC | 9 cut(s) | 1335, 1467, 1584, 1939, 2014, 2484, 2983, 3015, 3461 |
| SduI | GDGCHC | 8 cut(s) | 2331, 2348, 2396, 2497, 2724, 2790, 3184, 3316 |
| SfaNI | GCATC | 7 cut(s) | 1240, 1387, 1599, 2866, 2881, 3256, 3502 |
| SfcI | CTRYAG | 1 cut(s) | 3203 |
| SfoI | GGCGCC | 2 cut(s) | 2307, 3217 |
| Sfr274I | CTCGAG | 1 cut(s) | 2395 |
| Sfr303I | CCGCGG | 1 cut(s) | 3460 |
| SgrBI | CCGCGG | 1 cut(s) | 3460 |
| SinI | GGWCC | 5 cut(s) | 1797, 1839, 2089, 2926, 3387 |
| SlaI | CTCGAG | 1 cut(s) | 2395 |
| SmaI | CCCGGG | 2 cut(s) | 1179, 2774 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 1601, 2423 |
| SmlI | CTYRAG | 1 cut(s) | 2395 |
| SmoI | CTYRAG | 1 cut(s) | 2395 |
| SpeI | ACTAGT | 1 cut(s) | 2027 |
| SseBI | AGGCCT | 2 cut(s) | 1463, 1482 |
| SspDI | GGCGCC | 2 cut(s) | 2305, 3215 |
| SspMI | CTAG | 5 cut(s) | 1532, 1613, 2028, 3039, 3527 |
| SstI | GAGCTC | 1 cut(s) | 2790 |
| StuI | AGGCCT | 2 cut(s) | 1463, 1482 |
| StyI | CCWWGG | 3 cut(s) | 1162, 1705, 2085 |
| TaaI | ACNGT | 9 cut(s) | 1397, 1660, 2155, 2275, 2341, 2679, 2879, 3060, 3311 |
| TaiI | ACGT | 5 cut(s) | 1698, 1862, 2361, 2547, 2591 |
| TaqII | GACCGA | 1 cut(s) | 3176 |
| TfiI | GAWTC | 4 cut(s) | 580, 1963, 2428, 3029 |
| Tru1I | TTAA | 2 cut(s) | 1869, 3054 |
| Tru9I | TTAA | 2 cut(s) | 1869, 3054 |
| TscAI | CASTG | 4 cut(s) | 2071, 2205, 2346, 2494 |
| TseFI | GTSAC | 6 cut(s) | 1519, 2066, 2237, 2359, 2879, 2911 |
| Tsp45I | GTSAC | 6 cut(s) | 1519, 2066, 2237, 2359, 2879, 2911 |
| TspDTI | ATGAA | 2 cut(s) | 1768, 2955 |
| TspMI | CCCGGG | 2 cut(s) | 1177, 2772 |
| TspRI | CASTG | 4 cut(s) | 2071, 2205, 2346, 2494 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 1599, 3225 |
| VneI | GTGCAC | 1 cut(s) | 2327 |
| VpaK11BI | GGWCC | 5 cut(s) | 1797, 1839, 2089, 2926, 3387 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 1317, 2867 |
| XceI | RCATGY | 1 cut(s) | 1600 |
| XcmI | CCANNNNNNNNNTGG | 3 cut(s) | 2228, 2371, 2569 |
| XhoI | CTCGAG | 1 cut(s) | 2395 |
| XmaI | CCCGGG | 2 cut(s) | 1177, 2772 |
| XmiI | GTMKAC | 1 cut(s) | 2681 |
| XspI | CTAG | 5 cut(s) | 1532, 1613, 2028, 3039, 3527 |
| ZraI | GACGTC | 1 cut(s) | 2359 |